Pregenerated sensors for REL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020275Ensembl transcript IDs: ENSMUST00000102864.5
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGAAGGCAGCTGCTTACCAAGAGCATCCCACAGCAGGAGAAGCTaGGGTGCTGAGGAGAGTGCAGACAACACAGCCCCGTCCCACAGG | + |
|
Preference number: 1 (lower is better) Translates to: REGSCLPRASHSRRS*GAEESADNTAPSHR Trigger: CCTGTGGGACGGGGCTGTGTTGTCTGCACTCTCCTCAGCACCGCAGCTTCTCCTGCTGTGGGATGCTCTTGGTAAGCAGCTGCCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 90 bp | CAGCCCCGTCCCACAGGATCCTGTCCTTCAGGAGGTGCCAGGCTATaGACAGCACAGACAAGGAGGGTAAAGGCTGACAGGAAGACAAGG | + |
|
Preference number: 1 (lower is better) Translates to: QPRPTGSCPSGGARL*TAQTRRVKADRKTR Trigger: CCTTGTCTTCCTGTCAGCCTTTACCCTCCTTGTCTGTGCTGTCCATAGCCTGGCACCTCCTGAAGGACAGGATCCTGTGGGACGGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | CTAGTAATCCCAGCACTCCCGAGGCAGAGCAGGAGAACTGAAGGCTaGGTTCATCGTTGGCTACATAGCAGGTTGAGGCCAGCCTGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: LVIPALPRQSRRTEG*VHRWLHSRLRPACL Trigger: GAGACAGGCTGGCCTCAACCTGCTATGTAGCCAACGATGAACTCAGCCTTCAGTTCTCCTGCTCTGCCTCGGGAGTGCTGGGATTACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | AAGAATAAAGGCGCACCAAGGTGCTTAGCAACGGGAAGCATGGCGTaGCAATATACAGAGCAGGGAAGGCTGAAGGAGACACAAGGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: KNKGAPRCLATGSMA*QYTEQGRLKETQGW Trigger: CCAGCCTTGTGTCTCCTTCAGCCTTCCCTGCTCTGTATATTGTCACGCCATGCTTCCCGTTGCTAAGCACCTTGGTGCGCCTTTATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | AAGCATTCTATCCTCTTCCGTGCACATCCAACCTCTGAACAGACCTaGAACCCTGCAGTGGCAACGTCACAGGAGTTAAAGTACTCCCAA | + |
|
Preference number: 1 (lower is better) Translates to: KHSILFRAHPTSEQT*NPAVATSQELKYSQ Trigger: TTGGGAGTACTTTAACTCCTGTGACGTTGCCACTGCAGGGTTTCAGGTCTGTTCAGAGGTTGGATGTGCACGGAAGAGGATAGAATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | ACAGGAAGACAAGGAACTGGGAAAACTAAAGACAGAGATGGAAGGTaGAGGAGCGAGCGAGAGGTGAGAAGATGGAAGAGGCAAAATGTG | + |
|
Preference number: 1 (lower is better) Translates to: TGRQGTGKTKDRDGR*RSEREVRRWKRQNV Trigger: CACATTTTGCCTCTTCCATCTTCTCACCTCTCGCTCGCTCCTTCACCTTCCATCTCTGTCTTTAGTTTTCCCAGTTCCTTGTCTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | GAAGATACTTACTCTGTTTATGCAAAGGAAGCAAGAACTAACTGGTaGCATGGGGACAGGAGGAGAGACGCTGTGCACAAGCAGAATCTG | + |
|
Preference number: 1 (lower is better) Translates to: EDTYSVYAKEARTNW*HGDRRRDAVHKQNL Trigger: CAGATTCTGCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTTCCTTTGCATAAACAGAGTAAGTATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | GGTCTATTAACCATAGCCAATAGTGTTTTAAAGTTCTCTGGTGACTaGCTAGCTGAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTT | + |
|
Preference number: 1 (lower is better) Translates to: GLLTIANSVLKFSGD*LAEVSLKHPSCLIL Trigger: AAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTCAGCTAGTCAGTCACCAGAGAACTTTAAAACACTATTGGCTATGGTTAATAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | CCCTCCTCTCTGAAATCTAAATATTTTACATTAGGTGAGGTGTGGTaGCATATGCCTACAATCCTAGTACTCAGAAGGGAGAGGCAGGTC | + |
|
Preference number: 1 (lower is better) Translates to: PSSLKSKYFTLGEVW*HMPTILVLRRERQV Trigger: GACCTGCCTCTCCCTTCTGAGTACTAGGATTGTAGGCATATGTCACCACACCTCACCTAATGTAAAATATTTAGATTTCAGAGAGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR GCA 90 bp | CCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGCTaGTTCACTAAGAGCAGTGAAGTCATAGTTATCCCAAGATGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: PHPSKYWSYRIYHYG*FTKSSEVIVIPRCL Trigger: GAGGCATCTTGGGATAACTATGACTTCACTGCTCTTAGTGAAGCAGCCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | ACGCAAGCTCCTCCACTGAGTCACACCCTTGGTCTTTTCTATTTCTaGGACAAGATTTCCATAAGCTGTTCAAGCTGGTATTTAACTTAC | + |
|
Preference number: 1 (lower is better) Translates to: TQAPPLSHTLGLFYF*DKISISCSSWYLTY Trigger: GTAAGTTAAATACCAGCTTGAACAGCTTATGGAAATCTTGTCTCAGAAATAGAAAAGACCAAGGGTGTGACTCAGTGGAGGAGCTTGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | CACAAAGAAATCAAGTCACAAAATACCAAAAGTAAAGCCAGTAACTaGCTTCCCTTGATAAGAAAGTGTCCTCGGAGAGAGCCAGGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: HKEIKSQNTKSKASN*LPLIRKCPRREPGP Trigger: TGGACCTGGCTCTCTCCGAGGACACTTTCTTATCAAGGGAAGTCAGTTACTGGCTTTACTTTTGGTATTTTGTGACTTGATTTCTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR GCA 90 bp | TATGGCTGCTTCACTAAGAGCAGTGAAGTCATAGTTATCCCAAGATaGCTCAGCCTTACTTTACTCCAGCTCATGAGAAGTTACATTTTG | + |
|
Preference number: 1 (lower is better) Translates to: YGCFTKSSEVIVIPR*LSLTLLQLMRSYIL Trigger: CAAAATGTAACTTCTCATGAGCTGGAGTAAAGTAAGGCTGAGGCATCTTGGGATAACTATGACTTCACTGCTCTTAGTGAAGCAGCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 90 bp | CATGGAACAGGGTACATTGTACAATATACAGTTACAAAAATGTTATaGATACAGGCTACTTACATGTCTATGCATGGTAAACTGTCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: HGTGYIVQYTVTKML*IQATYMSMHGKLSR Trigger: CCTTGACAGTTTACCATGCATAGACATGTAAGTAGCCTGTATTCATAACATTTTTGTAACTGTATATTGTACAATGTACCCTGTTCCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACACCTGCCTCTGCCCCCTaGGTGCTGGTTTTAAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EVSLKHPSCLILPSIGATPASAP*VLVLKE Trigger: CTCCTTTAAAACCAGCACCCAGGGGGCAGAGGCAGG...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAAGAAGCAGACTTCCATaGGTTCCAGGACAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EVSLKHPSCLILPSIGATRSRLP*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCATGGAAGTCTGCTTCT...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCGCTTCGGATGCATACTaGGGAAATGGCCTTCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: KQELTGDMGTGGETLCTSASDAY*GNGLLG Trigger: ACCCAGAAGGCCATTTCCTCAGTATGCATCCGAAGC...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCGTGGTTGGTCTGAGCTaGGCAGATAGCTCAACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: KQELTGDMGTGGETLCTSVVGLS*ADSSTV Trigger: CACAGTTGAGCTATCTGCTCAGCTCAGACCAACCAC...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGGGCTACATAGCAGGTTaGGGCCAGCCTGTCTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: KRIGSQQALKNQNSGLEVGYIAG*GQPVSH Trigger: GTGTGAGACAGGCTGGCCTCAACCTGCTATGTAGCC...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGGGAGCGAGCGAGAGGTaGGAAGATGGAAGAGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: IPPASSFQVLELQDISLWGASER*EDGRGK Trigger: TTTGCCTCTTCCATCTTCTCACCTCTCGCTCGCTCC...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGGGAGGTGCCAGGCTATaGACAGCACAGACAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KRIGSQQALKNQNSGLEVGGARL*TAQTRR Trigger: CCTCCTTGTCTGTGCTGTCCATAGCCTGGCACCTCC...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCAAGGAGGGTAAAGGCTaGCAGGAAGACAAGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: VPLGYVGYNLPYRGRISTKEGKG*QEDKEL Trigger: CAGTTCCTTGTCTTCCTGTCAGCCTTTACCCTCCTT...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACACTACTTACATGTCTATaGATGGTAAACTGTCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EVSLKHPSCLILPSIGATLLTCL*MVNCQG Trigger: CCCTTGACAGTTTACCATGCATAGACATGTAAGTAG...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACACTTTATCTTGTTGCATaGTGTCTGACAGCTTATGGT | + |
|
Preference number: 2 (lower is better) Translates to: EVSLKHPSCLILPSIGATLYLVA*CLTAYG Trigger: ACCATAAGCTGTCAGACAGCATGCAACAAGATAAAG...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACATGCACAAGCAGAATCTaGAAAAGAAGGCCAATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: EVSLKHPSCLILPSIGATCTSRI*KRRPIL Trigger: AAGAATTGGCCTTCTTTTCCAGATTCTGCTTGTGCA...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAAAAACTTCCATGCCTTaGAAGCTTACTTTAACACAC | + |
|
Preference number: 2 (lower is better) Translates to: EVSLKHPSCLILPSIGATKTSMP*KLTLTH Trigger: GTGTGTTAAAGTAAGCTTTCAAGGCATGGAAGTTTT...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCGGTCTTTTCTATTTCTaGGACAAGATTTCCATAAGC | + |
|
Preference number: 2 (lower is better) Translates to: KQELTGDMGTGGETLCTSGLFYF*DKISIS Trigger: GCTTATGGAAATCTTGTCTCAGAAATAGAAAAGACC...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR GCA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGTCAAACACAGGGCCATaGTCTACCATGAAGCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: IPPASSFQVLELQDISLWSNTGP*STMKHV Trigger: CACATGCTTCATGGTAGAGCATGGCCCTGTGTTTGA...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAACACGACACAGCATAGTAAAACAAACTGACTTACTCTACACTAAGGTTTTCGAGGACAGGGCACTGTaGGGGAAGGGCTCTTGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ETRHSIVKQTDLLYTKVFEDRAL*GKGSWY Trigger: ATACCAAGAGCCCTTCCCCCACAGTGCCCTGTCCTC...GAAAACCTTAGTGTAGAGTAAGTCAGTTTGTTTTACTATGCTGTGTCGTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCGAGTTTATTTCCCAATaGCATAGCCATTACACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VPLGYVGYNLPYRGRISTEFISQ*HSHYTF Trigger: AAACGTGTAATGGCTATGCCATTGGGAAATAAACTC...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTGATACTATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTGGGTATCATGCATACTGAGGAAATaGCCTTCTGGGTTTGACGAT | + |
|
Preference number: 2 (lower is better) Translates to: PDTILVVLRFPREQLWVSCILRK*PSGFDD Trigger: ATCGTCAAACCCAGAAGGCCATTTCCTCAGTATGCA...TGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGACTGAGTCACACCCTTaGTCTTTTCTATTTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KRIGSQQALKNQNSGLEVTESHP*SFLFLR Trigger: TCTCAGAAATAGAAAAGACCAAGGGTGTGACTCAGT...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CAA 90 bp | GACTCAAAAGGACAATATATGACTGGAGGACAATCAGATATGACTTaGAGGTCTCTATTAAATTATCCCCGTGACAGCAGTAATGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: DSKGQYMTGGQSDMT*RSLLNYPRDSSNAM Trigger: CATGGCATTACTGCTGTCACGGGGATAATTTAATAGAGACCTCAAAGTCATATCTGATTGTCCTCCAGTCATATATTGTCCTTTTGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTGATACTATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTGGGTATCATTAGAGGAAAAACTGTaGAATAAGTCACTGTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PDTILVVLRFPREQLWVSLEEKL*NKSLCE Trigger: CTCACACAGTGACTTATTTCACAGTTTTTCCTCTAA...TGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR GCA 72 bp | AGCTGCTTACCAAGAGCATCCCACAGCAGGAGAAGCTaGGGTGCTGAGGAGAGTGCAGACAACACAGCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SCLPRASHSRRS*GAEESADNTAP Trigger: CGGGGCTGTGTTGTCTGCACTCTCCTCAGCACCGCAGCTTCTCCTGCTGTGGGATGCTCTTGGTAAGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | CCCACAGGATCCTGTCCTTCAGGAGGTGCCAGGCTATaGACAGCACAGACAAGGAGGGTAAAGGCTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTGSCPSGGARL*TAQTRRVKADR Trigger: CCTGTCAGCCTTTACCCTCCTTGTCTGTGCTGTCCATAGCCTGGCACCTCCTGAAGGACAGGATCCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | CCAGCACTCCCGAGGCAGAGCAGGAGAACTGAAGGCTaGGTTCATCGTTGGCTACATAGCAGGTTGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PALPRQSRRTEG*VHRWLHSRLRP Trigger: TGGCCTCAACCTGCTATGTAGCCAACGATGAACTCAGCCTTCAGTTCTCCTGCTCTGCCTCGGGAGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | GGCGCACCAAGGTGCTTAGCAACGGGAAGCATGGCGTaGCAATATACAGAGCAGGGAAGGCTGAAGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GAPRCLATGSMA*QYTEQGRLKET Trigger: TGTCTCCTTCAGCCTTCCCTGCTCTGTATATTGTCACGCCATGCTTCCCGTTGCTAAGCACCTTGGTGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR GCA 72 bp | ATAGACTTGGGTGGCACCTTCATGCCTATGGCCCACTaGTGGGCTTCCAAGAATAGCGTGGGCTTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: IDLGGTFMPMAH*WASKNSVGFPF Trigger: GAATGGAAAGCCCACGCTATTCTTGGAAGCCCAGCAGTGGGCCATAGGCATGAAGGTGCCACCCAAGTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCTGTGAGTACCATCTGTaGAGCTCTCTAATAGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: KQELTGDMGTGGETLCTSCEYHL*SSLIAA Trigger: CGCAGCTATTAGAGAGCTCAACAGATGGTACTCACA...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACATCCAAGAGAACAGCTTaGGGTATCAAAGAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EVSLKHPSCLILPSIGATSKRTA*GIKEPQ Trigger: CTGAGGCTCTTTGATACCCAAAGCTGTTCTCTTGGA...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | GATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTaGTTTGGAGGTGCGGAGAACTTCTGGGGTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DRKSAGSQKSEQ*FGGAENFWGPK Trigger: CTTGGGACCCCAGAAGTTCTCCGCACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | AAGGAGACGGTGGGCTTCGGATGCATACTGAGGAAATaGCCTTCTGGGTTTGACGATGGAATAGACAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: KETVGFGCILRK*PSGFDDGIDRC Trigger: ACATCTGTCTATTCCATCGTCAAACCCAGAAGGCCATTTCCTCAGTATGCATCCGAAGCCCACCGTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | CAGGCTATGGACAGCACAGACAAGGAGGGTAAAGGCTaGCAGGAAGACAAGGAACTGGGAAAACTAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QAMDSTDKEGKG*QEDKELGKLKT Trigger: TGTCTTTAGTTTTCCCAGTTCCTTGTCTTCCTGTCAGCCTTTACCCTCCTTGTCTGTGCTGTCCATAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | ACCATAGCCAATAGTGTTTTAAAGTTCTCTGGTGACTaGCTAGCTGAGGTCTCCCTCAAGCATCCCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TIANSVLKFSGD*LAEVSLKHPSC Trigger: GCAGGAGGGATGCTTGAGGGAGACCTCAGCTAGTCAGTCACCAGAGAACTTTAAAACACTATTGGCTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | TTAAATATTCAAGGGATGAAACTGGATAGACTTGGGTaGCACCTTCATGCCTATGGCCCACTGCTGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LNIQGMKLDRLG*HLHAYGPLLGF Trigger: GAAGCCCAGCAGTGGGCCATAGGCATGAAGGTGCCACCCAAGTCTATCCAGTTTCATCCCTTGAATATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | CCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTaGAGCTACAGGATATATCACTATGGCTGCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PQASLLPHPSKY*SYRIYHYGCFT Trigger: AGTGAAGCAGCCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | CTTCGGATGCATACTGAGGAAATGGCCTTCTGGGTTTaGCGATGGAATAGACAGATGTGGGAGGTAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRMHTEEMAFWV*RWNRQMWEVKE Trigger: TTCCTTTACCTCCCACATCTGTCTATTCCATCGTCAAACCCAGAAGGCCATTTCCTCAGTATGCATCCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | TTGAGACAAGTTTTCTCTGTGTATCCCCATCTGGCCTaGCACTTACTACAGAGTAAGTGTCCAGCCCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LRQVFSVYPHLA*HLLQSKCPAQT Trigger: AGTTTGGGCTGGACACTTACTCTGTAGTAAGTGTCAGGCCAGATGGGGATACACAGAGAAAACTTGTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAACACGACACAGCATAGTAAAACAAACTGACTTACTCTACACTAAGGTTTTCCCCTTAGGGGTCACTTaGGCCTATGGGCCTCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: ETRHSIVKQTDLLYTKVFPLGVT*AYGPQQ Trigger: TTGTTGAGGCCCATAGGCCAAAGTGACCCCTAAGGG...GAAAACCTTAGTGTAGAGTAAGTCAGTTTGTTTTACTATGCTGTGTCGTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | TCCATACAGAGGCAGGATTTCTACCTGATACTATACTaGTGGTACTACGATTTCCAAGAGAACAGCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SIQRQDFYLILY*WYYDFQENSFG Trigger: CCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGGTAGAAATCCTGCCTCTGTATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | AAATCAGAACAGTGGTTTGGAGGTGCGGAGAACTTCTaGGGTCCCAAGCATAGTGGTTGCATTGTTTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: KSEQWFGGAENF*GPKHSGCIVLI Trigger: TATTAAAACAATGCAACCACTATGCTTGGGACCCCAGAAGTTCTCCGCACCTCCAAACCACTGTTCTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | CCTCCACTGAGTCACACCCTTGGTCTTTTCTATTTCTaGGACAAGATTTCCATAAGCTGTTCAAGCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PPLSHTLGLFYF*DKISISCSSWY Trigger: ATACCAGCTTGAACAGCTTATGGAAATCTTGTCTCAGAAATAGAAAAGACCAAGGGTGTGACTCAGTGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR GCA 72 bp | TCCAAGTATTGGAGCTACAGGATATATCACTATGGCTaGTTCACTAAGAGCAGTGAAGTCATAGTTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKYWSYRIYHYG*FTKSSEVIVIP Trigger: TGGGATAACTATGACTTCACTGCTCTTAGTGAAGCAGCCATAGTGATATATCCTGTAGCTCCAATACTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | ATCAAGTCACAAAATACCAAAAGTAAAGCCAGTAACTaGCTTCCCTTGATAAGAAAGTGTCCTCGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IKSQNTKSKASN*LPLIRKCPRRE Trigger: CTCTCTCCGAGGACACTTTCTTATCAAGGGAAGTCAGTTACTGGCTTTACTTTTGGTATTTTGTGACTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | TCCCAAGATGCCTCAGCCTTACTTTACTCCAGCTCATaGGAAGTTACATTTTGGCTAAAGAAGCTTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQDASALLYSSS*EVTFWLKKLRK Trigger: TTTTCTAAGCTTCTTTAGCCAAAATGTAACTTCTCATGAGCTGGAGTAAAGTAAGGCTGAGGCATCTTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | ATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTaGGTATCAAAGAGCCTCAGGGTAGTTTTTATACTT | + |
|
Preference number: 3 (lower is better) Translates to: ILVVLRFPREQL*VSKSLRVVFIL Trigger: AAGTATAAAAACTACCCTGAGGCTCTTTGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | ACAGGTTATCTTGGCATCATTACTTTTCCTGCAGGGTaGAGCACCTTTCCCATTAAAAACTATATCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGYLGIITFPAG*STFPIKNYILK Trigger: TTTGAGGATATAGTTTTTAATGGGAAAGGTGCTTCACCCTGCAGGAAAAGTAATGATGCCAAGATAACCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR TCA 72 bp | CTGAAATCTAAATATTTTACATTAGGTGAGGTGTGGTaGCATATGCCTACAATCCTAGTACTCAGAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKSKYFTLGEVW*HMPTILVLRRE Trigger: CTCCCTTCTGAGTACTAGGATTGTAGGCATATGTCACCACACCTCACCTAATGTAAAATATTTAGATTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CCA 72 bp | TTGGGGAAATACAGAAAACAACTCACAGCAAGCACGTaGACTTTAGGCATATCTTTCAAAGTAAGAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGKYRKQLTAST*TLGISFKVRNS Trigger: ACTGTTTCTTACTTTGAAAGATATGCCTAAAGTCCACGTGCTTGCTGTGAGTTGTTTTCTGTATTTCCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCCAGAACTGGAGCTGGTaGCCGCGGACAGACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQELTGDMGTGGETLCTSQNWSW*PRTDWQ Trigger: CTGCCAGTCTGTCCGCGGGCACCAGCTCCAGTTCTG...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCGGGCCACTGAGGGTATaGCTGGTGGGTGATGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQELTGDMGTGGETLCTSGPLRV*LVGDVA Trigger: TGCCACATCACCCACCAGCCATACCCTCAGTGGCCC...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACATTGCCCTGGAACTCCTaGAGACCTGGGCATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSLKHPSCLILPSIGATLPWNS*RPGHFW Trigger: CCAGAAATGCCCAGGTCTTCAGGAGTTCCAGGGCAA...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGAAGGCCTCCGCAGCTaGATTTTCACTGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVSLKHPSCLILPSIGATEGLRS*IFTVTG Trigger: GCCTGTGACAGTGAAAATGCAGCTGCGGAGGCCTTC...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCGGCTGGTGGGTGATGTaGCAATCCACTCGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQELTGDMGTGGETLCTSGWWVM*QSTRDG Trigger: TCCATCTCGAGTGGATTGCCACATCACCCACCAGCC...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCCCATGCCATCAGTGCTaGGTGCCATCACACTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQELTGDMGTGGETLCTSPCHQC*VPSHSE Trigger: CTCTGAGTGTGATGGCACCCAGCACTGATGGCATGG...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGGGGTGTGAGGTGGGGTaGGTCACTGGTGGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPPASSFQVLELQDISLWGCEVG*VTGGQL Trigger: AAGCTGGCCACCAGTGACTCACCCCACCTCACACCC...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCTGCGCTCCCCTGGGATaGTACCTGCTGATCGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPLGYVGYNLPYRGRISTCAPLG*YLLIAL Trigger: AAGGGCGATCAGCAGGTAGCATCCCAGGGGAGCGCA...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCGGTTGTTGTCTGTGCTaGGCTCCCCTGGGATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLGYVGYNLPYRGRISTGCCLC*APLGCY Trigger: GTAGCATCCCAGGGGAGCGCAGCACAGACAACAACC...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCTGTCAGTGTCCCCCATaGCATCAGTGCTGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLGYVGYNLPYRGRISTCQCPP*HQCWVP Trigger: TGGCACCCAGCACTGATGGCATGGGGGACACTGACA...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACACTCTTGGGCCTAGCCTaGCATTACATGAGGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVSLKHPSCLILPSIGATLLGLA*HYMRGF Trigger: AAAACCCCTCATGTAATGCCAGGCTAGGCCCAAGAG...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | AAATGTTACGCAAGCTCCTCCACTGAGTCACACCCTTGGTCTTTTCTATTTCTGGGCCAGCTTGTAGGCTaGTGGGCCACTGAGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KCYASSSTESHPWSFLFLGQLVG*WATEGM Trigger: CATACCCTCAGTGGCCCATCAGCCTACAAGCTGGCC...CAGAAATAGAAAAGACCAAGGGTGTGACTCAGTGGAGGAGCTTGCGTAACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCGACTCACTAACTTCCTaGTCAGAAGGCCTCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLGYVGYNLPYRGRISTDSLTS*SEGLRS Trigger: GCTGCGGAGGCCTTCTGACCAGGAAGTTAGTGAGTC...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACACAGAGGGGCAGTTCTTaGTTTCTCAGTAAAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EVSLKHPSCLILPSIGATQRGSS*FLSKVT Trigger: GGTCACTTTACTGAGAAACCAAGAACTGCCCCTCTG...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CAA 72 bp | CCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATaGGAGCTACAGGATATATCACTATGGCTGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSSIPPASSFQV*ELQDISLWLLH Trigger: GTGAAGCAGCCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAAATACCTGGTTAGATTCTTTATAGTGAAGCAGACAGGCTTTAGGAGATCCGGTTGTTGTCTGTaGTGCGCTCCCCTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPKYLVRFFIVKQTGFRRSGCCL*CAPLGC Trigger: GCATCCCAGGGGAGCGCAGCACAGACAACAACCGGA...TCTCCTAAAGCCTGTCTGCTTCACTATAAAGAATCTAACCAGGTATTTTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGTGGGATGCTACCTGCTaGTCGCCCTTCACACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KRIGSQQALKNQNSGLEVWDATC*SPFTLV Trigger: TACAAGTGTGAAGGGCGATCAGCAGGTAGCATCCCA...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | CCTGATACTATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTGGGTATCAATGCACTCAAGTCGCTaGCACCAGGCCCTTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDTILVVLRFPREQLWVSMHSSR*HQALLG Trigger: TCCTAGAAGGGCCTGGTGTCAGCGACTTGAGTGCAT...TGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAACGGTTGTCATAAATTaGGTTAGAAACAATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSLKHPSCLILPSIGATTVVIN*VRNNGR Trigger: CCTCCCATTGTTTCTAACCCAATTTATGACAACCGT...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | AAAAGAATAAAGATTTCCAGTAACAGAATGGGCAGACACAGGACACTGAGTAGGGGGGTGAGTCACTGGTaGCCAGCTTGTAGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KRIKISSNRMGRHRTLSRGVSHW*PACRLM Trigger: CATCAGCCTACAAGCTGGCCACCAGTGACTCACCCC...CCTACTCAGTGTCCTGTGTCTGCCCATTCTGTTACTGGAAATCTTTATTCTTTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGAAACAAAAACAGAACTaGAGCTGGTGCCCGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IPPASSFQVLELQDISLWKQKQN*SWCPRT Trigger: TGTCCGCGGGCACCAGCTCCAGTTCTGTTTTTGTTT...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCGTGTACATCAGCTTGTaGAAAAACACCTCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLGYVGYNLPYRGRISTVYISL*KNTSGF Trigger: GAAGCCAGAGGTGTTTTTTCACAAGCTGATGTACAC...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | GAAACACGACACAGCATAGTAAAACAAACTGACTTACTCTACACTAAGGTTTTCCCCCCATGCCATCAGTaGTGGGTGCCATCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETRHSIVKQTDLLYTKVFPPCHQ*WVPSHS Trigger: TGAGTGTGATGGCACCCAGCACTGATGGCATGGGGG...GAAAACCTTAGTGTAGAGTAAGTCAGTTTGTTTTACTATGCTGTGTCGTGTTTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGTGGAAGGATACCTTGTaGATTAGAGGAAAGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPPASSFQVLELQDISLWWKDTL*IRGKCS Trigger: GGAACACTTTCCTCTAATTCACAAGGTATCCTTCCA...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | CCTGATACTATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTGGGTATCATCAGGAAGGAAAACTTaGAAACACAGCCTCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PDTILVVLRFPREQLWVSSGRKT*KHSLTT Trigger: TGTGGTGAGGCTGTGTTTTCAAGTTTTCCTTCCTGA...TGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | AAAAGAATAAAGATTTCCAGTAACAGAATGGGCAGACACAGGACACTGAGTAGGTTTCATCTCCTCCCCTaGCACTTCCACAGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRIKISSNRMGRHRTLSRFHLLP*HFHSSC Trigger: ACAAGAACTGTGGAAGTGTCAGGGGAGGAGATGAAA...CCTACTCAGTGTCCTGTGTCTGCCCATTCTGTTACTGGAAATCTTTATTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | GAAACACGACACAGCATAGTAAAACAAACTGACTTACTCTACACTAAGGTTTTCACAGCCTCACCACATTaGGGTCGCAGTCTTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ETRHSIVKQTDLLYTKVFTASPH*GRSLQC Trigger: ACATTGAAGACTGCGACCTCAATGTGGTGAGGCTGT...GAAAACCTTAGTGTAGAGTAAGTCAGTTTGTTTTACTATGCTGTGTCGTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAAATACCTGGTTAGATTCTTTATAGTGAAGCAGACAGGCTTTAGGAGAAACCGCATTCCCCTCTaGCTTGGCTGTTCAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: SPKYLVRFFIVKQTGFRRNRIPL*LGCSII Trigger: AATAATTGAACAGCCAAGGCAGAGGGGAATGCGGTT...TCTCCTAAAGCCTGTCTGCTTCACTATAAAGAATCTAACCAGGTATTTTGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAAATACCTGGTTAGATTCTTTATAGTGAAGCAGACAGGCTTTAGGAGATCAATGTCCAGCAGCTaGTGTTCAGGGACATTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPKYLVRFFIVKQTGFRRSMSSS*CSGTLK Trigger: TTTCAATGTCCCTGAACAGCAGCTGCTGGACATTGA...TCTCCTAAAGCCTGTCTGCTTCACTATAAAGAATCTAACCAGGTATTTTGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | CCTGATACTATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTGGGTATCAAAGGGATCACTCAGTTaGTCACTTTGCAGAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PDTILVVLRFPREQLWVSKGSLS*SLCRVL Trigger: TAACACTCTGCAAAGTGAGCAACTGAGTGATCCCTT...TGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR TCA 90 bp | GAAACACGACACAGCATAGTAAAACAAACTGACTTACTCTACACTAAGGTTTTCGAGGCAGAGCAGTTGTaGAGTTACCATGTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETRHSIVKQTDLLYTKVFEAEQL*SYHVHQ Trigger: CTGATGAACATGGTAACTTCACAACTGCTCTGCCTC...GAAAACCTTAGTGTAGAGTAAGTCAGTTTGTTTTACTATGCTGTGTCGTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | CCTGATACTATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTTGGGTATCACTCAGTTGCTCACTTTaGAGAGTGTTAACACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PDTILVVLRFPREQLWVSLSCSL*RVLTLE Trigger: TTCAAGTGTTAACACTCTGCAAAGTGAGCAACTGAG...TGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATAGTATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CCA 90 bp | AGATTCTTTATAGTGAAGCAGACAGGCTTTAGGAGATCAAACGGAATGAGAACACAAAGGTCTGCGTTCTaGTCCAAATTCTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RFFIVKQTGFRRSNGMRTQRSAF*SKFCFI Trigger: TATGAAGCAGAATTTGGACCAGAACGCAGACCTTTG...TGTTCTCATTCCGTTTGATCTCCTAAAGCCTGTCTGCTTCACTATAAAGAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CAA 72 bp | GGACAATATATGACTGGAGGACAATCAGATATGACTTaGAGGTCTCTATTAAATTATCCCCGTGACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQYMTGGQSDMT*RSLLNYPRDSS Trigger: ACTGCTGTCACGGGGATAATTTAATAGAGACCTCAAAGTCATATCTGATTGTCCTCCAGTCATATATTGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| 3UTR CAA 72 bp | TATACTGGTGGTACTACGATTTCCAAGAGAACAGCTTaGGGTATCAAAGAGCCTCAGGGTAGTTTTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: YTGGTTISKRTA*GIKEPQGSFYT Trigger: AGTATAAAAACTACCCTGAGGCTCTTTGATACCCAAAGCTGTTCTCTTGGAAATCGTAGTACCACCAGTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR GCA 90 bp | AAAAGAATAAAGATTTCCAGTAACAGAATGGGCAGACACAGGACACTGAGTAGGTTCTGGTCCAAATTCTaGTTCATAGTATCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRIKISSNRMGRHRTLSRFWSKF*FIVSIS Trigger: AGAGATGGATACTATGAAGCAGAATTTGGACCAGAA...CCTACTCAGTGTCCTGTGTCTGCCCATTCTGTTACTGGAAATCTTTATTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | GTACCGCTGGGGTATGTAGGATATAACCTTCCATACAGAGGCAGGATTTCTACCGACGGGTATGTCCGGTaGTTGTCTGTGCTGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPLGYVGYNLPYRGRISTDGYVR*LSVLRS Trigger: GGAGCGCAGCACAGACAACAACCGGACATACCCGTC...GGTAGAAATCCTGCCTCTGTATGGAAGGTTATATCCTACATACCCCAGCGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGAACTAACTGGTGACATGGGGACAGGAGGAGAGACGCTGTGCACAAGCGAGGGGTTTTCAAGATaGATGCTCACAAGTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQELTGDMGTGGETLCTSEGFSR*MLTSLG Trigger: CCCAAGACTTGTGAGCATCAATCTTGAAAACCCCTC...GCTTGTGCACAGCGTCTCTCCTCCTGTCCCCATGTCACCAGTTAGTTCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS GCA 90 bp | AAATCCATAGACTCACTAACTTCCTGGTCAGAAGGCCTCCGCAGCTaGATTTTCACTGTCACAGGCTCCAGTATAGCTTTGCAATACGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSIDSLTSWSEGLRS*IFTVTGSSIALQYG Trigger: TCCGTATTGCAAAGCTATACTGGAGCCTGTGACAGTGAAAATGCAGCTGCGGAGGCCTTCTGACCAGGAAGTTAGTGAGTCTATGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CCA 90 bp | ATCTATCAAATGCATCTGACTGTGAAACAAAAACAGAACTGGAGCTaGTGCCCGCGGACAGACTGGCAGGAGACATCTGATGTAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IYQMHLTVKQKQNWS*CPRTDWQETSDVVV Trigger: GACAACTACATCAGATGTCTCCTGCCAGTCTGTCCGCGGGCACCAGCTCCAGTTCTGTTTTTGTTTCACAGTCAGATGCATTTGATAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | GAGGTCTCCCTCAAGCATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACACGAGTAGATAGCATGTaGACATCAGAGATACTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EVSLKHPSCLILPSIGATRVDSM*TSEILY Trigger: ATACAGTATCTCTGATGTCAACATGCTATCTACTCG...TGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGATGCTTGAGGGAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGGATCGCCCTTCACACTaGTATCTAAACCGCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRIGSQQALKNQNSGLEVDRPSH*YLNRIP Trigger: GGGAATGCGGTTTAGATACAAGTGTGAAGGGCGATC...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGACACTTCCACAGTTCTaGTTCACACGGCAGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPPASSFQVLELQDISLWTLPQF*FTRQIL Trigger: AAGGATCTGCCGTGTGAACAAGAACTGTGGAAGTGT...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS GCA 90 bp | CCTGCTGATCGCCCTTCACACTTGTATCTAAACCGCATTCCCCTCTaGCTTGGCTGTTCAATTATTTCTACGTATGGATTATATCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PADRPSHLYLNRIPL*LGCSIISTYGLYPL Trigger: GAGTGGATATAATCCATACGTAGAAATAATTGAACAGCCAAGGCAGAGGGGAATGCGGTTTAGATACAAGTGTGAAGGGCGATCAGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | ATCCCTCCTGCCTCATCCTTCCAAGTATTGGAGCTACAGGATATATCACTATGGTGCTGTTCAGGGACATaGAAAGGATTGATTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPPASSFQVLELQDISLWCCSGT*KGLIPA Trigger: TGCAGGAATCAATCCTTTCAATGTCCCTGAACAGCA...CCATAGTGATATATCCTGTAGCTCCAATACTTGGAAGGATGAGGCAGGAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AGCCCAAAATACCTGGTTAGATTCTTTATAGTGAAGCAGACAGGCTTTAGGAGAATCTTCCTTCTCCAGTaGATCCCAGAGGGGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPKYLVRFFIVKQTGFRRIFLLQ*IPEGQF Trigger: GAACTGCCCCTCTGGGATCAACTGGAGAAGGAAGAT...TCTCCTAAAGCCTGTCTGCTTCACTATAAAGAATCTAACCAGGTATTTTGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGGCATTCCCCTCTGCCTaGGCTGTTCAATTATTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KRIGSQQALKNQNSGLEVAFPSA*AVQLFL Trigger: TAGAAATAATTGAACAGCCAAGGCAGAGGGGAATGC...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGAATAAAGATTTCCAGTAACAGAATGGGCAGACACAGGACACTGAGTAGGGAAGGGATCACTCAGTaGCTCACTTTGCAGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KRIKISSNRMGRHRTLSREGITQ*LTLQSV Trigger: AACACTCTGCAAAGTGAGCAACTGAGTGATCCCTTC...CCTACTCAGTGTCCTGTGTCTGCCCATTCTGTTACTGGAAATCTTTATTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGAATAAAGATTTCCAGTAACAGAATGGGCAGACACAGGACACTGAGTAGGATCAGGAAGGAAAACTaGAAAACACAGCCTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KRIKISSNRMGRHRTLSRIRKEN*KTQPHH Trigger: GTGGTGAGGCTGTGTTTTCAAGTTTTCCTTCCTGAT...CCTACTCAGTGTCCTGTGTCTGCCCATTCTGTTACTGGAAATCTTTATTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGGATAGGAAGTCAGCAGGCTCTCAAAAATCAGAACAGTGGTTTGGAGGTGAAAGTGACCACAATCTaGCAGCAGTTTCTGAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KRIGSQQALKNQNSGLEVKVTTI*QQFLKN Trigger: ATTTTTCAGAAACTGCTGCAAGATTGTGGTCACTTT...CACCTCCAAACCACTGTTCTGATTTTTGAGAGCCTGCTGACTTCCTATCCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS GCA 90 bp | AAGGTCTGCGTTCTGGTCCAAATTCTGCTTCATAGTATCCATCTCTaGAATCTTTTCCAACTAAATCATGAGGATGAGGCTTATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVCVLVQILLHSIHL*NLFQLNHEDEAYMD Trigger: ATCCATATAAGCCTCATCCTCATGATTTAGTTGGAAAAGATTGCAGAGATGGATACTATGAAGCAGAATTTGGACCAGAACGCAGACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CCA 90 bp | ATGAAGAATAGTAAGGTTCAGCTTGCCCTGGAACTCCTGAAGACCTaGGCATTTCTGGTAAAACTGTACCATGAGAAAATAAGTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: MKNSKVQLALELLKT*AFLVKLYHEKISLI Trigger: AATCAAACTTATTTTCTCATGGTACAGTTTTACCAGAAATGCCCAGGTCTTCAGGAGTTCCAGGGCAAGCTGAACCTTACTATTCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS-3UTR CAA 90 bp | AGCCCAAAATACCTGGTTAGATTCTTTATAGTGAAGCAGACAGGCTTTAGGAGATTAATTCTGCAGTATTaGGGGCACGGTTGTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPKYLVRFFIVKQTGFRRLILQY*GHGCHK Trigger: TTTATGACAACCGTGCCCCAAATACTGCAGAATTAA...TCTCCTAAAGCCTGTCTGCTTCACTATAAAGAATCTAACCAGGTATTTTGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS TCA 90 bp | CATCTGATAGTCCAGGCTCATTCATCAGGCCATTATCTACACAACTaGAGTTTGATCTATCAAATGCATCTGACTGTGAAACAAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HLIVQAHSSGHYLHN*SLIYQMHLTVKQKQ Trigger: CTGTTTTTGTTTCACAGTCAGATGCATTTGATAGATCAAACTTCAGTTGTGTAGATAATGGCCTGATGAATGAGCCTGGACTATCAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS TCA 72 bp | GTGTTCCCGCTGAGAAAGTACTCAGGGTATTTGTACTaGCTGGGTGTGAGGTGGGGTGAGTCACTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VFPLRKYSGYLY*LGVRWGESLVA Trigger: GGCCACCAGTGACTCACCCCACCTCACACCCAGTCAGTACAAATACCCTGAGTACTTTCTCAGCGGGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CCA 72 bp | CAAAAACAGAACTGGAGCTGGTGCCCGCGGACAGACTaGCAGGAGACATCTGATGTAGTTGTCTCAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QKQNWSWCPRTD*QETSDVVVSGL Trigger: GAGACCTGAGACAACTACATCAGATGTCTCCTGCCAGTCTGTCCGCGGGCACCAGCTCCAGTTCTGTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 72 bp | GGGCCTAGCCTGGCATTACATGAGGGGTTTTCAAGATaGATGCTCACAAGTCTTGGGTTGTCAGTGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSLALHEGFSR*MLTSLGLSVSP Trigger: GGGGGACACTGACAACCCAAGACTTGTGAGCATCAATCTTGAAAACCCCTCATGTAATGCCAGGCTAGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 90 bp | GGCCTCCGCAGCTGCATTTTCACTGTCACAGGCTCCAGTATAGCTTaGCAATACGGAGGAGTCTTGAAAACAATGGCTACTTGGCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLRSCIFTVTGSSIA*QYGGVLKTMATWRC Trigger: ACACCGCCAAGTAGCCATTGTTTTCAAGACTCCTCCGTATTGCAAAGCTATACTGGAGCCTGTGACAGTGAAAATGCAGCTGCGGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS GCA 72 bp | GACTCACTAACTTCCTGGTCAGAAGGCCTCCGCAGCTaGATTTTCACTGTCACAGGCTCCAGTATAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSLTSWSEGLRS*IFTVTGSSIAL Trigger: CAAAGCTATACTGGAGCCTGTGACAGTGAAAATGCAGCTGCGGAGGCCTTCTGACCAGGAAGTTAGTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 72 bp | TGGCAGGAGACATCTGATGTAGTTGTCTCAGGTCTCTaGGGCCTAGCCTGGCATTACATGAGGGGTTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: WQETSDVVVSGL*GLAWHYMRGFQ Trigger: TTGAAAACCCCTCATGTAATGCCAGGCTAGGCCCAAGAGACCTGAGACAACTACATCAGATGTCTCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 90 bp | CAAAGCAGAAATATTTCATCTCCTCCCCTGACACTTCCACAGTTCTaGTTCACACGGCAGATCCTTAATTCTGCAGTATTTGGGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: QSRNISSPPLTLPQF*FTRQILNSAVFGAR Trigger: CCGTGCCCCAAATACTGCAGAATTAAGGATCTGCCGTGTGAACAAGAACTGTGGAAGTGTCAGGGGAGGAGATGAAATATTTCTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CCA 72 bp | AGTAAGGTTCAGCTTGCCCTGGAACTCCTGAAGACCTaGGCATTTCTGGTAAAACTGTACCATGAGAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: SKVQLALELLKT*AFLVKLYHEKI Trigger: TATTTTCTCATGGTACAGTTTTACCAGAAATGCCCAGGTCTTCAGGAGTTCCAGGGCAAGCTGAACCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 72 bp | AGCTGCATTTTCACTGTCACAGGCTCCAGTATAGCTTaGCAATACGGAGGAGTCTTGAAAACAATGGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: SCIFTVTGSSIA*QYGGVLKTMAT Trigger: AGTAGCCATTGTTTTCAAGACTCCTCCGTATTGCAAAGCTATACTGGAGCCTGTGACAGTGAAAATGCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 72 bp | CAGTCTTCAATGTCCAGCAGCTGCTGTTCAGGGACATaGAAAGGATTGATTCCTGCACTAATCCTTAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: QSSMSSSCCSGT*KGLIPALILKI Trigger: TATTTTAAGGATTAGTGCAGGAATCAATCCTTTCAATGTCCCTGAACAGCAGCTGCTGGACATTGAAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CAA 72 bp | AATATTTCATCTCCTCCCCTGACACTTCCACAGTTCTaGTTCACACGGCAGATCCTTAATTCTGCAGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: NISSPPLTLPQF*FTRQILNSAVF Trigger: AAATACTGCAGAATTAAGGATCTGCCGTGTGAACAAGAACTGTGGAAGTGTCAGGGGAGGAGATGAAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS TCA 72 bp | GTCCAGGCTCATTCATCAGGCCATTATCTACACAACTaGAGTTTGATCTATCAAATGCATCTGACTGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VQAHSSGHYLHN*SLIYQMHLTVK Trigger: TTTCACAGTCAGATGCATTTGATAGATCAAACTTCAGTTGTGTAGATAATGGCCTGATGAATGAGCCTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||
| CDS CCA 72 bp | TTCACACTTGTATCTAAACCGCATTCCCCTCTGCCTTaGCTGTTCAATTATTTCTACGTATGGATTATATCC | + |
|
Preference number: 6 (lower is better) Translates to: FTLVSKPHSPLP*LFNYFYVWIIS Trigger: GGATATAATCCATACGTAGAAATAATTGAACAGCCAAGGCAGAGGGGAATGCGGTTTAGATACAAGTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102864.5 |
||