Pregenerated sensors for REG3G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030017Ensembl transcript IDs: ENSMUST00000032089.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGGAGAATGTTCCCTTTTTCATCTGTCTTCACATTTGGGATCTTaGTTGTGGCTAGGTATATATCAACCCATGATGTCAATTCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: WGECSLFHLSSHLGS*LWLGIYQPMMSILY Trigger: GTACAGAATTGACATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAAAGGGAACATTCTCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTTTCATCTGTCTTCTTGGGATCTTGCTTGTaGCTAGGTATATATCAACCC | + |
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Preference number: 2 (lower is better) Translates to: SGGQISIVGRMFPFSSVFLGSCL*LGIYQP Trigger: GGGTTGATATATACCTAGCCACAAGCAAGATCCCAA...GAAGACAGATGAAAAAGGGAACATTCTCCCCACAATCGAAATCTGACCTCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| 3UTR CAA 90 bp | GTGGGGAGAATGTTCCCTTTTTCATCTGTCTTCACATTTGGGATCTaGCTTGTGGCTAGGTATATATCAACCCATGATGTCAATTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VGRMFPFSSVFTFGI*LVARYISTHDVNSV Trigger: TACAGAATTGACATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAAAGGGAACATTCTCCCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| 3UTR CAA 90 bp | TTTCGATTGTGGGGAGAATGTTCCCTTTTTCATCTGTCTTCACATTaGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: FRLWGECSLFHLSSH*GSCLWLGIYQPMMS Trigger: TGACATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAAAGGGAACATTCTCCCCACAATCGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR GCA 90 bp | GAGAAGGAGAAAATCAGGAGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTAGCCCTTGGGGCAGCTaGTACGTGAAGATGGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EKEKIRRSDFDCGENVPFSPWGS*YVKMGH Trigger: ATGCCCCATCTTCACGTAGCAGCTGCCCCAAGGGCT...AAAGGGAACATTCTCCCCACAATCGAAATCTGACCTCCTGATTTTCTCCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CCA 90 bp | TCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATAGGCACGGGAGCCCTTaGGGCAGCTGCTACGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SVFTFGILLVARYISTHDRHGSP*GSCYVK Trigger: CTTCACGTAGCAGCTGCCCCAAGGGCTCCCGTGCCT...ATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR TCA 90 bp | CAGGAGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTTTCATCTGTCTTCAACTTCACCTTGCACCTaGGAAAGGAGCATCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QEVRFRLWGECSLFHLSSTSPCT*ERSIRQ Trigger: CTGCCTGATGCTCCTTTCTCAGGTGCAAGGTGAAGT...TGAAGACAGATGAAAAAGGGAACATTCTCCCCACAATCGAAATCTGACCTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR TCA 90 bp | TTTTCATCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCGGGGCAGCTGCTACGTaGAGATGGGGCATCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSSVFTFGILLVARYISTGAAAT*RWGIFL Trigger: AAGAAAGATGCCCCATCTTCACGTAGCAGCTGCCCC...GGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR TCA 90 bp | TCATCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATAAGCTTCAGCGCCACTaGGCACAGACACAAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SSVFTFGILLVARYISTHKLQRH*AQTQDV Trigger: GACATCTTGTGTCTGTGCTCAGTGGCGCTGAAGCTT...ATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR GCA 90 bp | CTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATGTCATCACATCAGCATTaGTCCACTCCCATCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LSSHLGSCLWLGIYQPMMSSHQH*STPIHL Trigger: GAGGTGGATGGGAGTGGAGCAATGCTGATGTGATGA...CATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CCA 90 bp | GAGAAGGAGAAAATCAGGAGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTATGGGGCATCTTTCTTaGCAACTTCACCTTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: EKEKIRRSDFDCGENVPFMGHLS*QLHLAP Trigger: AGGTGCAAGGTGAAGTTGCCAAGAAAGATGCCCCAT...AAAGGGAACATTCTCCCCACAATCGAAATCTGACCTCCTGATTTTCTCCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CCA 90 bp | TTTTCATCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCCCATCCACCTCTGTTaGGTTCATAGCCCAGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: FSSVFTFGILLVARYISTPIHLC*VHSPVS Trigger: CGACACTGGGCTATGAACCCAACAGAGGTGGATGGG...GGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR TCA 90 bp | TCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATACCACAGTGATTGCCTaGGGAAGAGGAAGGATTCGT | + |
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Preference number: 4 (lower is better) Translates to: SVFTFGILLVARYISTHDTTVIA*GRGRIR Trigger: ACGAATCCTTCCTCTTCCTCAGGCAATCACTGTGGT...ATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR GCA 90 bp | AGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTTTCATCTGTCTTCACATTGGGTACCACAGTGATTaGCTGAGGAAGAGGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: RSDFDCGENVPFFICLHIGYHSD*LRKRKD Trigger: ATCCTTCCTCTTCCTCAGGCAATCACTGTGGTACCC...AATGTGAAGACAGATGAAAAAGGGAACATTCTCCCCACAATCGAAATCTGACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR TCA 90 bp | TCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATTGTTACCACTGCTTTTaGTCATGGAGGACAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVFTFGILLVARYISTHDCYHCF*SWRTGR Trigger: CCTTCCTGTCCTCCATGATCAAAAGCAGTGGTAACA...ATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| 3UTR CAA 72 bp | TGGGGAGAATGTTCCCTTTTTCATCTGTCTTCACATTaGGGATCTTGCTTGTGGCTAGGTATATATCAACCC | + |
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Preference number: 4 (lower is better) Translates to: WGECSLFHLSSH*GSCLWLGIYQP Trigger: GGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAAAGGGAACATTCTCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR TCA 90 bp | CTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATGGATTCGTCTCCCAGTTaGTGTAATTCATCACATCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSHLGSCLWLGIYQPMMDSSPS*CNSSHQ Trigger: CTGATGTGATGAATTACATCAACTGGGAGACGAATC...CATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR GCA 90 bp | AGAAGGAGAAAATCAGGAGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTTTTGGCAGGCCATATCTaGATCATACCAGTTTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: RRRKSGGQISIVGRMFPFLAGHI*IIPVFR Trigger: TCTAAAAACTGGTATGATGCAGATATGGCCTGCCAA...AAAAGGGAACATTCTCCCCACAATCGAAATCTGACCTCCTGATTTTCTCCTTCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CCA 90 bp | TCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATCCAATCCATACATATTaGCCACTGTTACCACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SVFTFGILLVARYISTHDPIHTY*PLLPLL Trigger: AAGCAGTGGTAACAGTGGCCAATATGTATGGATTGG...ATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| 3UTR CAA 72 bp | TCCCTTTTTCATCTGTCTTCACATTTGGGATCTTGCTaGTGGCTAGGTATATATCAACCCATGATGTCAATT | + |
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Preference number: 4 (lower is better) Translates to: SLFHLSSHLGSC*WLGIYQPMMSI Trigger: AATTGACATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGAAAAAGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CAA 90 bp | AGAAGGAGAAAATCAGGAGGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTTCCCAATCCATACATATaGGCCACTGTTACCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: RRRKSGGQISIVGRMFPFPNPYI*ATVTTA Trigger: AGCAGTGGTAACAGTGGCCAATATGTATGGATTGGG...AAAAGGGAACATTCTCCCCACAATCGAAATCTGACCTCCTGATTTTCTCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CAA 90 bp | GGTCAGATTTCGATTGTGGGGAGAATGTTCCCTTTTTCATCTGTCTTCACATTTTTCATCACATCAGCATaGCTCCACTCCCATCCACCT | + |
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Preference number: 5 (lower is better) Translates to: GQISIVGRMFPFSSVFTFFITSA*LHSHPP Trigger: AGGTGGATGGGAGTGGAGCAATGCTGATGTGATGAA...AAATGTGAAGACAGATGAAAAAGGGAACATTCTCCCCACAATCGAAATCTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CAA 90 bp | TCATCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGAAATCCTGAGGCTCTaGACAGGGTACCACAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SSVFTFGILLVARYISTHEILRL*TGYHSD Trigger: ATCACTGTGGTACCCTGTCAAGAGCCTCAGGATTTC...ATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTCACATTTGGGATCTTGCTTGTGGCTAGGTATATATCAACCCATGATCTGTTACCACTGCTTTaGATCATGGAGGACAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SVFTFGILLVARYISTHDLLPLL*IMEDRK Trigger: CTTCCTGTCCTCCATGATCAAAAGCAGTGGTAACAG...ATCATGGGTTGATATATACCTAGCCACAAGCAAGATCCCAAATGTGAAGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS CCA 72 bp | TGGGGCAGCTGCTACGTGAAGATGGGGCATCTTTCTTaGCAACTTCACCTTGCACCTGAGAAAGGAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: WGSCYVKMGHLS*QLHLAPEKGAS Trigger: TGATGCTCCTTTCTCAGGTGCAAGGTGAAGTTGCCAAGAAAGATGCCCCATCTTCACGTAGCAGCTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS TCA 72 bp | CAATCCATACATATTGGCCACTGTTACCACTGCTTTTaGTCATGGAGGACAGGAAGGAAGCTTCAGCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QSIHIGHCYHCF*SWRTGRKLQRH Trigger: GTGGCGCTGAAGCTTCCTTCCTGTCCTCCATGATCAAAAGCAGTGGTAACAGTGGCCAATATGTATGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS CAA 72 bp | CCAATCCATACATATTGGCCACTGTTACCACTGCTTTaGATCATGGAGGACAGGAAGGAAGCTTCAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PIHTYWPLLPLL*IMEDRKEASAP Trigger: TGGCGCTGAAGCTTCCTTCCTGTCCTCCATGATCAAAAGCAGTGGTAACAGTGGCCAATATGTATGGATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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| CDS CAA 90 bp | CTAAGTTACAATAATTCTCTCTCCACTTCAGAAATCCTGAGGCTCTaGACAGGGTACCACAGTGATTGCCTGAGGAAGAGGAAGGATTCG | + |
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Preference number: 6 (lower is better) Translates to: LSYNNSLSTSEILRL*TGYHSDCLRKRKDS Trigger: CGAATCCTTCCTCTTCCTCAGGCAATCACTGTGGTACCCTGTCAAGAGCCTCAGGATTTCTGAAGTGGAGAGAGAATTATTGTAACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032089.3 |
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