Pregenerated sensors for REG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023140Ensembl transcript IDs: ENSMUST00000023906.4, ENSMUST00000203657.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGTCTTTTTCAGCCAAGGGGAAGTCTTCTTCAGCTACCTGGCCTTaGCTGTATGACAGGAACATCAGGCATAAGAACAGGATAAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RSFSAKGKSSSATWP*LYDRNIRHKNRIRY Trigger: ATACCTTATCCTGTTCTTATGCCTGATGTTCCTGTCATACAGCCAAGGCCAGGTAGCTGAAGAAGACTTCCCCTTGGCTGAAAAAGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023906.4 ENSMUST00000203657.3 |
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| CDS CCA 72 bp | TCAGCCAAGGGGAAGTCTTCTTCAGCTACCTGGCCTTaGCTGTATGACAGGAACATCAGGCATAAGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAKGKSSSATWP*LYDRNIRHKNR Trigger: CCTGTTCTTATGCCTGATGTTCCTGTCATACAGCCAAGGCCAGGTAGCTGAAGAAGACTTCCCCTTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023906.4 ENSMUST00000203657.3 |
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| CDS CCA 72 bp | TCTTTTTCAGCCAAGGGGAAGTCTTCTTCAGCTACCTaGCCTTGGCTGTATGACAGGAACATCAGGCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSAKGKSSSAT*PWLYDRNIRHK Trigger: CTTATGCCTGATGTTCCTGTCATACAGCCAAGGCCAGGTAGCTGAAGAAGACTTCCCCTTGGCTGAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023906.4 ENSMUST00000203657.3 |
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| CDS CCA 72 bp | ATAATAACAGTAGGAACCATAGGCGTTGGCACCCTCTaGGCAGTTGATTTTGGCAGAAGGAAGGTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: IITVGTIGVGTL*AVDFGRRKVFF Trigger: GAAAAAGACCTTCCTTCTGCCAAAATCAACTGCCCAGAGGGTGCCAACGCCTATGGTTCCTACTGTTATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023906.4 ENSMUST00000203657.3 |
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