Pregenerated sensors for REG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059654Ensembl transcript IDs: ENSMUST00000079926.6, ENSMUST00000204601.3, ENSMUST00000204687.3
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCAGAAAATAATGGAGATACAGGTACCATAGGACAGTaGAGCAAGAATGTCTCTCCAGGAAGACAGGATCTA | + |
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Preference number: 3 (lower is better) Translates to: PENNGDTGTIGQ*SKNVSPGRQDL Trigger: TAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTACCTGTATCTCCATTATTTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR GCA 90 bp | TACAGGTACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTGACCCACTGCTCCAGTaGCAGCGACGATTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: YRYHRTVKQECLSRKTGSDPLLQ*QRRFLL Trigger: CAAAAGGAATCGTCGCTGGCACTGGAGCAGTGGGTC...AGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTACCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | TACAGGTACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTTTCCTGGCCTTGGCTTaGAGACAGGACGATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YRYHRTVKQECLSRKTGSFLALA*RQDDQA Trigger: TGCCTGATCGTCCTGTCTCCAAGCCAAGGCCAGGAA...AGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTACCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | AGATACAGGTACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATTCCTGGCCTTGGCTTaGAGACAGGACGATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RYRYHRTVKQECLSRKTGFLALA*RQDDQA Trigger: TGCCTGATCGTCCTGTCTCCAAGCCAAGGCCAGGAA...TCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTACCTGTATCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | TACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCAGGACGATCAGGCATaGGAGCAGGATGAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: YHRTVKQECLSRKTGSNLQDDQA*EQDEVG Trigger: GCCTACTTCATCCTGCTCTCATGCCTGATCGTCCTG...CAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | TACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGAACCTTCTGGGCAACTaGTCCTGGCAGATGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: YHRTVKQECLSRKTGSNLNLLGN*SWQMAG Trigger: ACCTGCCATCTGCCAGGATCAGTTGCCCAGAAGGTT...CAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTAACCTTCTGGGCAACTaGTCCTGGCAGATGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HRTVKQECLSRKTGSNLLNLLGN*SWQMAG Trigger: ACCTGCCATCTGCCAGGATCAGTTGCCCAGAAGGTT...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | TACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGAAGTTGCCCTCAGCCTaGCTGAGAACTGACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: YHRTVKQECLSRKTGSNLKLPSA*LRTDTR Trigger: CCTGGTGTCAGTTCTCAGTCAGGCTGAGGGCAACTT...CAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTAAGTTGCCCTCAGCCTaGCTGAGAACTGACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRTVKQECLSRKTGSNLLKLPSA*LRTDTR Trigger: CCTGGTGTCAGTTCTCAGTCAGGCTGAGGGCAACTT...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR GCA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTGACCCACTGCTCCAGTaGCAGCGACGATTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HRTVKQECLSRKTGSNLLDPLLQ*QRRFLL Trigger: CAAAAGGAATCGTCGCTGGCACTGGAGCAGTGGGTC...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTCCTGGCCTTGGCTTaGAGACAGGACGATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HRTVKQECLSRKTGSNLLFLALA*RQDDQA Trigger: TGCCTGATCGTCCTGTCTCCAAGCCAAGGCCAGGAA...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | TACAGGTACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAGCGACGATTCCTTTTaGGATCATGGAGTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: YRYHRTVKQECLSRKTGSSDDSF*DHGVQS Trigger: GGACTGGACTCCATGATCCCAAAAGGAATCGTCGCT...AGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | ACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATACAGGACGATCAGGCATaGGAGCAGGATGAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: TVKQECLSRKTGSNLLLIQDDQA*EQDEVG Trigger: GCCTACTTCATCCTGCTCTCATGCCTGATCGTCCTG...TATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | GTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATAGATCAGGACGATCAGGCATaGGAGCAGGATGAAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: VKQECLSRKTGSNLLLIDQDDQA*EQDEVG Trigger: GCCTACTTCATCCTGCTCTCATGCCTGATCGTCCTG...ATCTATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | GTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATAGATAAGTTGCCCTCAGCCTaGCTGAGAACTGACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VKQECLSRKTGSNLLLIDKLPSA*LRTDTR Trigger: CCTGGTGTCAGTTCTCAGTCAGGCTGAGGGCAACTT...ATCTATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTACTGATCCTGGCAGATaGCAGGTCTTCTTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HRTVKQECLSRKTGSNLLTDPGR*QVFFSF Trigger: GAAGCTGAAGAAGACCTGCCATCTGCCAGGATCAGT...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | GTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATAGATACTGATCCTGGCAGATaGCAGGTCTTCTTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VKQECLSRKTGSNLLLIDTDPGR*QVFFSF Trigger: GAAGCTGAAGAAGACCTGCCATCTGCCAGGATCAGT...ATCTATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | ACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATAAGCGACGATTCCTTTTaGGATCATGGAGTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TVKQECLSRKTGSNLLLISDDSF*DHGVQS Trigger: GGACTGGACTCCATGATCCCAAAAGGAATCGTCGCT...TATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CCA 90 bp | GTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATAGATAGCGACGATTCCTTTTaGGATCATGGAGTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VKQECLSRKTGSNLLLIDSDDSF*DHGVQS Trigger: GGACTGGACTCCATGATCCCAAAAGGAATCGTCGCT...ATCTATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | TACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTGTATCCTGTGTTTaGAGTCAGAGATACACAGTA | + |
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Preference number: 4 (lower is better) Translates to: YHRTVKQECLSRKTGSNLLVSCV*SQRYTV Trigger: TACTGTGTATCTCTGACTTCAAACACAGGATACAAG...CAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR TCA 90 bp | GTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATAGATTTAAACGGTCTTCAGTaGAGTAGTAACAATAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VKQECLSRKTGSNLLLIDLNGLQ*SSNNRS Trigger: GCTCCTATTGTTACTACTTCACTGAAGACCGTTTAA...ATCTATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | TACAGGTACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTTTCAGCTTCCTGGCCTaGGCTTGGAGACAGGACGAT | + |
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Preference number: 5 (lower is better) Translates to: YRYHRTVKQECLSRKTGSFSFLA*AWRQDD Trigger: ATCGTCCTGTCTCCAAGCCAAGGCCAGGAAGCTGAA...AGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTACCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTCAGCTTCCTGGCCTaGGCTTGGAGACAGGACGAT | + |
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Preference number: 5 (lower is better) Translates to: HRTVKQECLSRKTGSNLLFSFLA*AWRQDD Trigger: ATCGTCCTGTCTCCAAGCCAAGGCCAGGAAGCTGAA...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | ACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATATTCAGCTTCCTGGCCTaGGCTTGGAGACAGGACGAT | + |
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Preference number: 5 (lower is better) Translates to: TVKQECLSRKTGSNLLLIFSFLA*AWRQDD Trigger: ATCGTCCTGTCTCCAAGCCAAGGCCAGGAAGCTGAA...TATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | TACCATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGTATTGGGCATCACAGTaGTCATCCTTCCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: YHRTVKQECLSRKTGSNLYWASQ*SSFHFL Trigger: CAAGAAATGGAAGGATGACAACTGTGATGCCCAATA...CAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | CATAGGACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTCTTGTATCCTGTGTTaGAAGTCAGAGATACACAGT | + |
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Preference number: 5 (lower is better) Translates to: HRTVKQECLSRKTGSNLLSCILC*KSEIHS Trigger: ACTGTGTATCTCTGACTTCAAACACAGGATACAAGA...AAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGTCCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | ACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATATATTGGGCATCACAGTaGTCATCCTTCCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TVKQECLSRKTGSNLLLIYWASQ*SSFHFL Trigger: CAAGAAATGGAAGGATGACAACTGTGATGCCCAATA...TATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS-3UTR CAA 90 bp | ACAGTGAAGCAAGAATGTCTCTCCAGGAAGACAGGATCTAATTTGCTTTTGATATCTTGTATCCTGTGTTaGAAGTCAGAGATACACAGT | + |
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Preference number: 5 (lower is better) Translates to: TVKQECLSRKTGSNLLLISCILC*KSEIHS Trigger: ACTGTGTATCTCTGACTTCAAACACAGGATACAAGA...TATCAAAAGCAAATTAGATCCTGTCTTCCTGGAGAGACATTCTTGCTTCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS CCA 72 bp | GGCATTGGAACCTTCTGGGCAACTGATCCTGGCAGATaGCAGGTCTTCTTCAGCTTCCTGGCCTTGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GIGTFWATDPGR*QVFFSFLALAW Trigger: CCAAGCCAAGGCCAGGAAGCTGAAGAAGACCTGCCATCTGCCAGGATCAGTTGCCCAGAAGGTTCCAATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS TCA 72 bp | AAAGATCTGCATCAGCCCAAGTTAAACGGTCTTCAGTaGAGTAGTAACAATAGGAGCTGTAGGCATTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: KDLHQPKLNGLQ*SSNNRSCRHWN Trigger: GTTCCAATGCCTACAGCTCCTATTGTTACTACTTCACTGAAGACCGTTTAACTTGGGCTGATGCAGATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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| CDS TCA 72 bp | ACAGTTGTCATCCTTCCATTTCTTGTATCCTGTGTTTaGAGTCAGAGATACACAGTAGCCACGATTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: TVVILPFLVSCV*SQRYTVATIGT Trigger: AGTTCCAATCGTGGCTACTGTGTATCTCTGACTTCAAACACAGGATACAAGAAATGGAAGGATGACAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079926.6 ENSMUST00000204601.3 ENSMUST00000204687.3 |
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