Pregenerated sensors for REEP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035504Ensembl transcript IDs: ENSMUST00000040081.7, ENSMUST00000105354.8, ENSMUST00000105355.8, ENSMUST00000105357.2, ENSMUST00000105358.8, ENSMUST00000186864.7
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTCCCAAGGTCCGGCCTGCTGGCTGGGAGGCACCTCCCGAGCGCATaGGCAGCTGAGCGGAGCCCAGAGTCCCACTGGGCAGTCGGGCAC | + |
Preference number: 1 (lower is better) Translates to: VPRSGLLAGRHLPSA*AAERSPESHWAVGH Trigger: GTGCCCGACTGCCCAGTGGGACTCTGGGCTCCGCTCAGCTGCCCATGCGCTCGGGAGGTGCCTCCCAGCCAGCAGGCCGGACCTTGGGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR GCA 90 bp | TCCCGTGTGGCGGCCTGTTGTGCGATTGTGTCCCAAGGTCCGGCCTaGTGGCTGGGAGGCACCTCCCGAGCGCATGGGCAGCTGAGCGGA | + |
Preference number: 1 (lower is better) Translates to: SRVAACCAIVSQGPA*WLGGTSRAHGQLSG Trigger: TCCGCTCAGCTGCCCATGCGCTCGGGAGGTGCCTCCCAGCCAGCAGGCCGGACCTTGGGACACAATCGCACAACAGGCCGCCACACGGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 90 bp | CCCTGGGAGTCAAACTGCCCCGGCTGCGATGGGGCCGGGACTTGCTaGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCCC | + |
Preference number: 1 (lower is better) Translates to: PWESNCPGCDGAGTC*ESGSRWQKQWPADP Trigger: GGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGCCCCATCGCAGCCGGGGCAGTTTGACTCCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR GCA 90 bp | GCCTCGGAGGGTGCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTaGTTGTTCTTGGAACCTGCGTCCCCTGGCTCCACAGGAGCCTTG | + |
Preference number: 1 (lower is better) Translates to: ASEGAEVPATCVFWP*LFLEPASPGSTGAL Trigger: CAAGGCTCCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGCACCCTCCGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR TCA 90 bp | GCCAGATGTGGCAAAAGCCAGCAGTGTCTGGGGCAACGCAGCTGGTaGCTATACTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCG | + |
Preference number: 1 (lower is better) Translates to: ARCGKSQQCLGQRSW*LYCGHLQVISVVDS Trigger: CGAGTCTACCACGGAGATCACCTGTAAATGGCCACAGTATAGTCACCAGCTGCGTTGCCCCAGACACTGCTGGCTTTTGCCACATCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR GCA 90 bp | TCTGGGAGTCTGAAGAACTGTCAGAGGCCTGGACATTATCAGCTGTaGGTTCCTTGTCATTGGCTGGGGAATCCGCACACAGACTGCCAG | + |
Preference number: 1 (lower is better) Translates to: SGSLKNCQRPGHYQL*VPCHWLGNPHTDCQ Trigger: CTGGCAGTCTGTGTGCGGATTCCCCAGCCAATGACAAGGAACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTCTTCAGACTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR GCA 90 bp | ACTTGTTTTGATGACGGGCAGTTATTCGGTGAGGCTCTTGTACGGTaGTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTC | + |
Preference number: 1 (lower is better) Translates to: TCFDDGQLFGEALVR*SGGLVFHVAPWAGV Trigger: GACCCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTACAAGAGCCTCACCGAATAACTGCCCGTCATCAAAACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GCGGAGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCGGTCTCTCGGTCTTGTaGCCCACATGTGTGCAAGGG | + |
Preference number: 2 (lower is better) Translates to: AEPRVPLGSRARCAALGVGLSVL*PTCVQG Trigger: CCCTTGCACACATGTGGGCCACAAGACCGAGAGACC...GACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCTCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGTCCCCTCAAGGTCCGGCCTGCTaGCTGGGAGGCACCTCCCGA | + |
Preference number: 2 (lower is better) Translates to: VPATCVFWPCLFLEPASPQGPAC*LGGTSR Trigger: TCGGGAGGTGCCTCCCAGCCAGCAGGCCGGACCTTG...AGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CAA 90 bp | TCGGAGGGTGCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTaGTTCTTGGAACCTGCGTCCCCTGGCTCCACAGGAGCCTTGCTG | + |
Preference number: 2 (lower is better) Translates to: SEGAEVPATCVFWPC*FLEPASPGSTGALL Trigger: CAGCAAGGCTCCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGCACCCTCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GCCCCGGCTGCGATGGGGCCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGATGCGTTCCTTGTCATTaGCTGGGGAATCCGCACACA | + |
Preference number: 2 (lower is better) Translates to: APAAMGPGLAGNLGAAGRCVPCH*LGNPHT Trigger: TGTGTGCGGATTCCCCAGCCAATGACAAGGAACGCA...TCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGCCCCATCGCAGCCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | TCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGCTTGTGGTTGTGGTTGTaGTTGCGGTTGCGGTTGTGG | + |
Preference number: 2 (lower is better) Translates to: SHWAVGHAVQPWESNCPGLWLWL*LRLRLW Trigger: CCACAACCGCAACCGCAACCACAACCACAACCACAA...GCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | AGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCGGTCTCTCGGTCTTGTaGCCCACATGTGTGCAAGGG | + |
Preference number: 2 (lower is better) Translates to: RVPLGSRARCAALGVKLPGLSVL*PTCVQG Trigger: CCCTTGCACACATGTGGGCCACAAGACCGAGAGACC...GGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | AGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCGACTTGCTGGGAATCTaGGAGCCGCTGGCAGAAACA | + |
Preference number: 2 (lower is better) Translates to: RVPLGSRARCAALGVKLPDLLGI*EPLAET Trigger: TGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTC...GGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR TCA 90 bp | GGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCCCCTTTGTCTGGGAGTCTaGAGAACTGTCAGAGGCCTG | + |
Preference number: 2 (lower is better) Translates to: GTCWESGSRWQKQWPADPLCLGV*RTVRGL Trigger: CAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAG...GGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR TCA 90 bp | CTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTCGGGCAGTTATTCGGTaGGGCTCTTGTACGGTGCTC | + |
Preference number: 2 (lower is better) Translates to: LTCGGLPGGCFMWHCGRCRAVIR*GSCTVL Trigger: GAGCACCGTACAAGAGCCTCACCGAATAACTGCCCG...ACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | GCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGCTGCGATGGGATGGGTGTTTTGTGCTaGTGTGAGGGTGTTTCATGT | + |
Preference number: 2 (lower is better) Translates to: AVGHAVQPWESNCPGCDGMGVLC*CEGVSC Trigger: ACATGAAACACCCTCACAGCAGCACAAAACACCCAT...CCCATCGCAGCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CTGTGGCGGAGACCTGAGGGGTCTGGTGGTTTGTTCCCGTGTGGCGGCCTGTTGTGCGTTCCTTGTCATTaGCTGGGGAATCCGCACACA | + |
Preference number: 2 (lower is better) Translates to: LWRRPEGSGGLFPCGGLLCVPCH*LGNPHT Trigger: TGTGTGCGGATTCCCCAGCCAATGACAAGGAACGCA...CAACAGGCCGCCACACGGGAACAAACCACCAGACCCCTCAGGTCTCCGCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGCTGCGATGGGAGTGGTGTCTTTGTCTaGGAGTCTGAAGAACTGTCA | + |
Preference number: 2 (lower is better) Translates to: AVGHAVQPWESNCPGCDGSGVFV*ESEELS Trigger: TGACAGTTCTTCAGACTCCCAGACAAAGACACCACT...CCCATCGCAGCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCAGGCTGTGGTTGCAGTaGTGTCTTTGTCTGGGAGTC | + |
Preference number: 2 (lower is better) Translates to: PGLAGNLGAAGRNSGQLTRLWLQ*CLCLGV Trigger: GACTCCCAGACAAAGACACCACTGCAACCACAGCCT...GGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCCCTTGTGGTTGTGGTTGTaGTTGTGGTTGCGGTTGCGG | + |
Preference number: 2 (lower is better) Translates to: GTCWESGSRWQKQWPADPLWLWL*LWLRLR Trigger: CCGCAACCGCAACCACAACCACAACCACAACCACAA...GGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | AGGTCTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGTTTCATGTGGCTCCTTaGGCAGGGGTCTCTCGGTCT | + |
Preference number: 2 (lower is better) Translates to: RSDVWRPAWWVFHVALRQFHVAP*AGVSRS Trigger: AGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAA...CTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR TCA 90 bp | GCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGCTTTGTCTGGGAGTCTaGAGAACTGTCAGAGGCCTG | + |
Preference number: 2 (lower is better) Translates to: AEVPATCVFWPCLFLEPALCLGV*RTVRGL Trigger: CAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAG...CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR TCA 90 bp | ACGCAGCTGGTGACTATACTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCGAGCGCATGGGCAGCTaGGCGGAGCCCAGAGTCCCA | + |
Preference number: 2 (lower is better) Translates to: TQLVTILWPFTGDLRGRLERMGS*AEPRVP Trigger: TGGGACTCTGGGCTCCGCTCAGCTGCCCATGCGCTC...GAGTCTACCACGGAGATCACCTGTAAATGGCCACAGTATAGTCACCAGCTGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGAGGCTGTGGTTGCAGTaGTGTCTTTGTCTGGGAGTC | + |
Preference number: 2 (lower is better) Translates to: AEVPATCVFWPCLFLEPARLWLQ*CLCLGV Trigger: GACTCCCAGACAAAGACACCACTGCAACCACAGCCT...CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCCCTTGTGGCTGAGGCTGTaGTTGCAGTGGTGTCTTTGT | + |
Preference number: 2 (lower is better) Translates to: GTCWESGSRWQKQWPADPLWLRL*LQWCLC Trigger: ACAAAGACACCACTGCAACCACAGCCTCAGCCACAA...GGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGGTCTCTCGGTCTTGTaGCCCACATGTGTGCAAGGG | + |
Preference number: 2 (lower is better) Translates to: DVWRPAWWVFHVALRQMFGLSVL*PTCVQG Trigger: CCCTTGCACACATGTGGGCCACAAGACCGAGAGACC...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GCCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACTGTACGGTGCTCAGGTaGTCTAGTGTTTCATGTGGC | + |
Preference number: 2 (lower is better) Translates to: AGTCWESGSRWQKQWPADCTVLR*SSVSCG Trigger: GCCACATGAAACACTAGACCACCTGAGCACCGTACA...GTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CAA 90 bp | GGGACTGCCCATTCGTGGCCCGTGAGGGGCTTCCTACTGTCTTACTaGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTGGTT | + |
Preference number: 2 (lower is better) Translates to: GTAHSWPVRGFLLSY*GLRFGVVVVVVVVV Trigger: AACCACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAGGAAGCCCCTCACGGGCCACGAATGGGCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | AGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTTCATGGGTGTTTTGTaGTGCTGTGAGGGTGTTTCA | + |
Preference number: 2 (lower is better) Translates to: SPESHWAVGHAVQPWESNFMGVL*CCEGVS Trigger: TGAAACACCCTCACAGCAGCACAAAACACCCATGAA...GTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTGCGTTCCTTGTCATTaGCTGGGGAATCCGCACACA | + |
Preference number: 2 (lower is better) Translates to: LTCGGLPGGCFMWHCGRCCVPCH*LGNPHT Trigger: TGTGTGCGGATTCCCCAGCCAATGACAAGGAACGCA...ACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | AGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCAGTGGTGTCTTTGTCTaGGAGTCTGAAGAACTGTCA | + |
Preference number: 2 (lower is better) Translates to: RVPLGSRARCAALGVKLPSGVFV*ESEELS Trigger: TGACAGTTCTTCAGACTCCCAGACAAAGACACCACT...GGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTTTTCATGTGGCTCCTTaGGCAGGGGTCTCTCGGTCT | + |
Preference number: 2 (lower is better) Translates to: DVWRPAWWVFHVALRQMFFHVAP*AGVSRS Trigger: AGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAA...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | CCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCATGGGTGTTTTGTGCTaGTGTGAGGGTGTTTCATGT | + |
Preference number: 2 (lower is better) Translates to: PGLAGNLGAAGRNSGQLTMGVLC*CEGVSC Trigger: ACATGAAACACCCTCACAGCAGCACAAAACACCCAT...GGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCAGTGGTGTCTTTGTCTaGGAGTCTGAAGAACTGTCA | + |
Preference number: 2 (lower is better) Translates to: PGLAGNLGAAGRNSGQLTSGVFV*ESEELS Trigger: TGACAGTTCTTCAGACTCCCAGACAAAGACACCACT...GGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCGGTCTCTCGGTCTTGTaGCCCACATGTGTGCAAGGG | + |
Preference number: 2 (lower is better) Translates to: RVFHVGLCKRCLTWESTGGLSVL*PTCVQG Trigger: CCCTTGCACACATGTGGGCCACAAGACCGAGAGACC...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GAGCCTGAGCGGGTGGTTTTATTGCACACCTTGGAGGAGAGATGTTACACGGGGTGGAGGCCTGCCTGGTaGGTGTTTCATGTGGCACTG | + |
Preference number: 2 (lower is better) Translates to: EPERVVLLHTLEERCYTGWRPAW*VFHVAL Trigger: CAGTGCCACATGAAACACCCACCAGGCAGGCCTCCA...CCCCGTGTAACATCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCTCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCATGGAGGCCTGCCTGGTaGGTGTTTCATGTGGCACTG | + |
Preference number: 2 (lower is better) Translates to: GCFMWGCVKGVSLGSPRAWRPAW*VFHVAL Trigger: CAGTGCCACATGAAACACCCACCAGGCAGGCCTCCA...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | CTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCGGACAAATAATCCAGAGATGCGGAGGCTGTTGCTaGGGCTGCCGATCGGCCTGT | + |
Preference number: 2 (lower is better) Translates to: LWPFTGDLRGRLGQIIQRCGGCC*GCRSAC Trigger: ACAGGCCGATCGGCAGCCGCAGCAACAGCCTCCGCA...TCTCTGGATTATTTGTCCGAGTCTACCACGGAGATCACCTGTAAATGGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCATTTCATGTGGCTCCTTaGGCAGGGGTCTCTCGGTCT | + |
Preference number: 2 (lower is better) Translates to: GCFMWGCVKGVSLGSPRAFHVAP*AGVSRS Trigger: AGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAA...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR CAA 90 bp | GTTGCGGTTGCGGTTGTGGCTGAGGCTGTGGTTGCAGTGGTGTCTTaGTCTGGGAGTCTGAAGAACTGTCAGAGGCCTGGACATTATCAG | + |
Preference number: 2 (lower is better) Translates to: VAVAVVAEAVVAVVS*SGSLKNCQRPGHYQ Trigger: CTGATAATGTCCAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAGACACCACTGCAACCACAGCCTCAGCCACAACCGCAACCGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR GCA 90 bp | GAGGGTGCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAAATGGGTGTTTTGTGCTaGTGTGAGGGTGTTTCATGT | + |
Preference number: 2 (lower is better) Translates to: EGAEVPATCVFWPCLFLEMGVLC*CEGVSC Trigger: ACATGAAACACCCTCACAGCAGCACAAAACACCCAT...TTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGCACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CCA 90 bp | GTTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTTGTGGTTGTGGTTGTaGTTGTGGTTGCGGTTGCGG | + |
Preference number: 2 (lower is better) Translates to: VTRGTTGWCFTCTFMGVLLWLWL*LWLRLR Trigger: CCGCAACCGCAACCACAACCACAACCACAACCACAA...CAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CCA 90 bp | CTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCGGACAAATAATCCAGAGAGCCTTGCTGCCAGCCTaGTTGGGGTCAGGGGATGTG | + |
Preference number: 2 (lower is better) Translates to: LWPFTGDLRGRLGQIIQRALLPA*LGSGDV Trigger: CACATCCCCTGACCCCAACCAGGCTGGCAGCAAGGC...TCTCTGGATTATTTGTCCGAGTCTACCACGGAGATCACCTGTAAATGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CCA 90 bp | CGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGAGGGTGGAACTGTCAGAGGCCTaGACATTATCAGCTGTGCGT | + |
Preference number: 2 (lower is better) Translates to: RDGVSRAPSWVFCAAVRVELSEA*TLSAVR Trigger: ACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTC...CACCCTCACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CCA 90 bp | GTGAGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGTTGTGGTTGTGGTTGTaGTTGTGGTTGCGGTTGCGG | + |
Preference number: 2 (lower is better) Translates to: VRVFHVGLCKRCLTWESTLWLWL*LWLRLR Trigger: CCGCAACCGCAACCACAACCACAACCACAACCACAA...CGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CCA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACGGTCTCTCGGTCTTGTaGCCCACATGTGTGCAAGGG | + |
Preference number: 2 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDGLSVL*PTCVQG Trigger: CCCTTGCACACATGTGGGCCACAAGACCGAGAGACC...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCTGTACGGTGCTCAGGTaGTCTAGTGTTTCATGTGGC | + |
Preference number: 2 (lower is better) Translates to: RVFHVGLCKRCLTWESTGCTVLR*SSVSCG Trigger: GCCACATGAAACACTAGACCACCTGAGCACCGTACA...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
||
3UTR-3UTR TCA 90 bp | CTACTGTCTTACTTGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTGCTTTGTCTGGGAGTCTaGAGAACTGTCAGAGGCCTG | + |
Preference number: 2 (lower is better) Translates to: LLSYLGLRFGVVVVVVVVLCLGV*RTVRGL Trigger: CAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAG...CACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CTACTGTCTTACTTGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTGTTGTGGTTGTGGTTGTaGTTGCGGTTGCGGTTGTGG | + |
Preference number: 2 (lower is better) Translates to: LLSYLGLRFGVVVVVVVVLWLWL*LRLRLW Trigger: CCACAACCGCAACCGCAACCACAACCACAACCACAA...CACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACTTTCATGTGGCTCCTTaGGCAGGGGTCTCTCGGTCT | + |
Preference number: 2 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDFHVAP*AGVSRS Trigger: AGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAA...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | GAGCCTGAGCGGGTGGTTTTATTGCACACCTTGGAGGAGAGATGTTACACGGGGATGGGTGTTTTGTGCTaGTGTGAGGGTGTTTCATGT | + |
Preference number: 2 (lower is better) Translates to: EPERVVLLHTLEERCYTGMGVLC*CEGVSC Trigger: ACATGAAACACCCTCACAGCAGCACAAAACACCCAT...CCCCGTGTAACATCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCTCAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CTTCCTACTGTCTTACTTGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTGAACTGTCAGAGGCCTaGACATTATCAGCTGTGCGT | + |
Preference number: 2 (lower is better) Translates to: LPTVLLGLEVRRCGCGCGELSEA*TLSAVR Trigger: ACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTC...ACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCAAGTGGTGTCTTTGTCTaGGAGTCTGAAGAACTGTCA | + |
Preference number: 2 (lower is better) Translates to: GCFMWGCVKGVSLGSPRASGVFV*ESEELS Trigger: TGACAGTTCTTCAGACTCCCAGACAAAGACACCACT...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACAGGCTGTGGTTGCAGTaGTGTCTTTGTCTGGGAGTC | + |
Preference number: 2 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDRLWLQ*CLCLGV Trigger: GACTCCCAGACAAAGACACCACTGCAACCACAGCCT...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | CTACTGTCTTACTTGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTGTTGTGGCTGAGGCTGTaGTTGCAGTGGTGTCTTTGT | + |
Preference number: 2 (lower is better) Translates to: LLSYLGLRFGVVVVVVVVLWLRL*LQWCLC Trigger: ACAAAGACACCACTGCAACCACAGCCTCAGCCACAA...CACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CCA 90 bp | ACGCAGCTGGTGACTATACTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCTTGTGGCTGAGGCTGTaGTTGCAGTGGTGTCTTTGT | + |
Preference number: 2 (lower is better) Translates to: TQLVTILWPFTGDLRGRLLWLRL*LQWCLC Trigger: ACAAAGACACCACTGCAACCACAGCCTCAGCCACAA...GAGTCTACCACGGAGATCACCTGTAAATGGCCACAGTATAGTCACCAGCTGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | ACGCAGCTGGTGACTATACTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCAGCGGGTGGTTTTATTaGACACCTTGGAGGAGAGAT | + |
Preference number: 2 (lower is better) Translates to: TQLVTILWPFTGDLRGRLSGWFY*TPWRRD Trigger: ATCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCT...GAGTCTACCACGGAGATCACCTGTAAATGGCCACAGTATAGTCACCAGCTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR GCA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACAGCGGGTGGTTTTATTaGACACCTTGGAGGAGAGAT | + |
Preference number: 2 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDSGWFY*TPWRRD Trigger: ATCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCT...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR GCA 72 bp | GCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTaGCCCGGCTGCGATGGGGCCGGGACTTGCTGGGAA | + |
Preference number: 3 (lower is better) Translates to: AVGHAVQPWESN*PGCDGAGTCWE Trigger: TTCCCAGCAAGTCCCGGCCCCATCGCAGCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | AGCGCATGGGCAGCTGAGCGGAGCCCAGAGTCCCACTaGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCA | + |
Preference number: 3 (lower is better) Translates to: SAWAAERSPESH*AVGHAVQPWES Trigger: TGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCTCCGCTCAGCTGCCCATGCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR TCA 72 bp | GTTGCTGCGGCTGCCGATCGGCCTGTGGCGGAGACCTaGGGGGTCTGGTGGTTTGTTCCCGTGTGGCGGCCT | + |
Preference number: 3 (lower is better) Translates to: VAAAADRPVAET*GVWWFVPVWRP Trigger: AGGCCGCCACACGGGAACAAACCACCAGACCCCTCAGGTCTCCGCCACAGGCCGATCGGCAGCCGCAGCAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | GCCTGTTGTGCGATTGTGTCCCAAGGTCCGGCCTGCTaGCTGGGAGGCACCTCCCGAGCGCATGGGCAGCTG | + |
Preference number: 3 (lower is better) Translates to: ACCAIVSQGPAC*LGGTSRAHGQL Trigger: CAGCTGCCCATGCGCTCGGGAGGTGCCTCCCAGCCAGCAGGCCGGACCTTGGGACACAATCGCACAACAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | CTGCGGAGGCTGTTGCTGCGGCTGCCGATCGGCCTGTaGCGGAGACCTGAGGGGTCTGGTGGTTTGTTCCCG | + |
Preference number: 3 (lower is better) Translates to: LRRLLLRLPIGL*RRPEGSGGLFP Trigger: CGGGAACAAACCACCAGACCCCTCAGGTCTCCGCCACAGGCCGATCGGCAGCCGCAGCAACAGCCTCCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | GCCCCGGCTGCGATGGGGCCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGATGGCTGAGGCTGTGGTaGCAGTGGTGTCTTTGTCTG | + |
Preference number: 3 (lower is better) Translates to: APAAMGPGLAGNLGAAGRWLRLW*QWCLCL Trigger: CAGACAAAGACACCACTGCAACCACAGCCTCAGCCA...TCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGCCCCATCGCAGCCGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | GCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGCTGCGATGGGTGGTTGTGGTTGTGGTaGCGGTTGCGGTTGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: AVGHAVQPWESNCPGCDGWLWLW*RLRLWL Trigger: CAGCCACAACCGCAACCGCAACCACAACCACAACCA...CCCATCGCAGCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | GCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGGGCTCCACAGGAGCCTaGCTGCCAGCCTGGTTGGGG | + |
Preference number: 3 (lower is better) Translates to: AEVPATCVFWPCLFLEPAGSTGA*LPAWLG Trigger: CCCCAACCAGGCTGGCAGCAAGGCTCCTGTGGAGCC...CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR GCA 72 bp | GGGTCTGGTGGTTTGTTCCCGTGTGGCGGCCTGTTGTaGGATTGTGTCCCAAGGTCCGGCCTGCTGGCTGGG | + |
Preference number: 3 (lower is better) Translates to: GSGGLFPCGGLL*DCVPRSGLLAG Trigger: CCCAGCCAGCAGGCCGGACCTTGGGACACAATCGCACAACAGGCCGCCACACGGGAACAAACCACCAGACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | GATGGGGCCGGGACTTGCTGGGAATCTGGGAGCCGCTaGCAGAAACAGTGGCCAGCTGACCCCGGGATACAG | + |
Preference number: 3 (lower is better) Translates to: DGAGTCWESGSR*QKQWPADPGIQ Trigger: CTGTATCCCGGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGCCCCATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | TCAAACTGCCCCGGCTGCGATGGGGCCGGGACTTGCTaGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCA | + |
Preference number: 3 (lower is better) Translates to: SNCPGCDGAGTC*ESGSRWQKQWP Trigger: TGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGCCCCATCGCAGCCGGGGCAGTTTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR TCA 72 bp | GGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTaGCCCCGGGATACAGATGCAGGGCCTGGGCTGACT | + |
Preference number: 3 (lower is better) Translates to: GIWEPLAETVAS*PRDTDAGPGLT Trigger: AGTCAGCCCAGGCCCTGCATCTGTATCCCGGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR TCA 72 bp | ATCAGAGTGACAGGGGACCAGTGCCTCGGAGGGTGCTaGGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTT | + |
Preference number: 3 (lower is better) Translates to: IRVTGDQCLGGC*GAGHLCLLALL Trigger: AAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGCACCCTCCGAGGCACTGGTCCCCTGTCACTCTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR GCA 72 bp | AGTGACAGGGGACCAGTGCCTCGGAGGGTGCTGAGGTaGCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCT | + |
Preference number: 3 (lower is better) Translates to: SDRGPVPRRVLR*RPPVSSGPACS Trigger: AGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGCACCCTCCGAGGCACTGGTCCCCTGTCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | CTTCTGGCCCTGCTTGTTCTTGGAACCTGCGTCCCCTaGCTCCACAGGAGCCTTGCTGCCAGCCTGGTTGGG | + |
Preference number: 3 (lower is better) Translates to: LLALLVLGTCVP*LHRSLAASLVG Trigger: CCCAACCAGGCTGGCAGCAAGGCTCCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | TGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTaGAACCTGCGTCCCCTGGCTCCACAGGAGCCTTGC | + |
Preference number: 3 (lower is better) Translates to: CRPPVSSGPACS*NLRPLAPQEPC Trigger: GCAAGGCTCCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | GCCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACGTTTCATGTGGCTCCTaGGGCAGGGGTCTCTCGGTC | + |
Preference number: 3 (lower is better) Translates to: AGTCWESGSRWQKQWPADVSCGS*GRGLSV Trigger: GACCGAGAGACCCCTGCCCAAGGAGCCACATGAAAC...GTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | TCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGCGAGCGGGTGGTTTTATaGCACACCTTGGAGGAGAGA | + |
Preference number: 3 (lower is better) Translates to: SHWAVGHAVQPWESNCPGERVVL*HTLEER Trigger: TCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCTC...GCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | ACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTaGCCAGCTGACCCCGGGATACAGATGCAGGGCCTG | + |
Preference number: 3 (lower is better) Translates to: TCWESGSRWQKQ*PADPGIQMQGL Trigger: CAGGCCCTGCATCTGTATCCCGGGGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | CTGTGGCGGAGACCTGAGGGGTCTGGTGGTTTGTTCCCGTGTGGCGGCCTGTTGTGGCTGAGGCTGTGGTaGCAGTGGTGTCTTTGTCTG | + |
Preference number: 3 (lower is better) Translates to: LWRRPEGSGGLFPCGGLLWLRLW*QWCLCL Trigger: CAGACAAAGACACCACTGCAACCACAGCCTCAGCCA...CAACAGGCCGCCACACGGGAACAAACCACCAGACCCCTCAGGTCTCCGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | AGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCGAGCGGGTGGTTTTATaGCACACCTTGGAGGAGAGA | + |
Preference number: 3 (lower is better) Translates to: RVPLGSRARCAALGVKLPERVVL*HTLEER Trigger: TCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCTC...GGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | TCCACGGGCAGGTCTGACGTGTGGAGGCCTGCCTGGTaGGTGTTTCATGTGGCACTGCGGCAGATGTTTGAC | + |
Preference number: 3 (lower is better) Translates to: STGRSDVWRPAW*VFHVALRQMFD Trigger: GTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAGACCTGCCCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCAGTTTCATGTGGCTCCTaGGGCAGGGGTCTCTCGGTC | + |
Preference number: 3 (lower is better) Translates to: GCFMWGCVKGVSLGSPRAVSCGS*GRGLSV Trigger: GACCGAGAGACCCCTGCCCAAGGAGCCACATGAAAC...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CAA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCGTTTCATGTGGCTCCTaGGGCAGGGGTCTCTCGGTC | + |
Preference number: 3 (lower is better) Translates to: RVFHVGLCKRCLTWESTGVSCGS*GRGLSV Trigger: GACCGAGAGACCCCTGCCCAAGGAGCCACATGAAAC...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CAA 90 bp | GTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGTCCCCTACCTTCATGGGTGTTTaGTGCTGCTGTGAGGGTGTT | + |
Preference number: 3 (lower is better) Translates to: VPATCVFWPCLFLEPASPTFMGV*CCCEGV Trigger: AACACCCTCACAGCAGCACAAAACACCCATGAAGGT...AGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR GCA 72 bp | GTTCCTTGTCATTGGCTGGGGAATCCGCACACAGACTaGCAGCAGACCTCCTCACTTGTGGTTCAGGAGTGG | + |
Preference number: 3 (lower is better) Translates to: VPCHWLGNPHTD*QQTSSLVVQEW Trigger: CCACTCCTGAACCACAAGTGAGGAGGTCTGCTGGCAGTCTGTGTGCGGATTCCCCAGCCAATGACAAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR GCA 72 bp | CTTGTGGCCCACATGTGTGCAAGGGTGGTGCTAGTATaGCAGATGTGGCAAAAGCCAGCAGTGTCTGGGGCA | + |
Preference number: 3 (lower is better) Translates to: LVAHMCARVVLV*QMWQKPAVSGA Trigger: TGCCCCAGACACTGCTGGCTTTTGCCACATCTGGCATACTAGCACCACCCTTGCACACATGTGGGCCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | GTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTaGGAGTCCACGGGCAGGTCTGACGTGTGGAGGCCT | + |
Preference number: 3 (lower is better) Translates to: VFHVGLCKRCLT*ESTGRSDVWRP Trigger: AGGCCTCCACACGTCAGACCTGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
||
3UTR CCA 72 bp | CACATGTGTGCAAGGGTGGTGCTAGTATGCCAGATGTaGCAAAAGCCAGCAGTGTCTGGGGCAACGCAGCTG | + |
Preference number: 3 (lower is better) Translates to: HMCARVVLVCQM*QKPAVSGATQL Trigger: CAGCTGCGTTGCCCCAGACACTGCTGGCTTTTGCCACATCTGGCATACTAGCACCACCCTTGCACACATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CAA 90 bp | GCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGGTTTTATTGCACACCTaGGAGGAGAGATGTTACACG | + |
Preference number: 3 (lower is better) Translates to: AEVPATCVFWPCLFLEPAVLLHT*EERCYT Trigger: CGTGTAACATCTCTCCTCCAAGGTGTGCAATAAAAC...CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR GCA 72 bp | TGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTaGGGCAGATGTTTGACTTGTTTTGATGACGGGCAG | + |
Preference number: 3 (lower is better) Translates to: CGGLPGGCFMWH*GRCLTCFDDGQ Trigger: CTGCCCGTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
||
3UTR CCA 72 bp | CCTTGGAGGAGAGATGTTACACGGGGGACCACGGGATaGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGC | + |
Preference number: 3 (lower is better) Translates to: PWRRDVTRGTTG*CFTCTFMGVLC Trigger: GCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAACATCTCTCCTCCAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
||
3UTR CCA 72 bp | GCAGTGTCTGGGGCAACGCAGCTGGTGACTATACTGTaGCCATTTACAGGTGATCTCCGTGGTAGACTCGGA | + |
Preference number: 3 (lower is better) Translates to: AVSGATQLVTIL*PFTGDLRGRLG Trigger: TCCGAGTCTACCACGGAGATCACCTGTAAATGGCCACAGTATAGTCACCAGCTGCGTTGCCCCAGACACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CAA 90 bp | CTACTGTCTTACTTGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTGTGGTTGTGGTTGTGGTaGCGGTTGCGGTTGTGGCTG | + |
Preference number: 3 (lower is better) Translates to: LLSYLGLRFGVVVVVVVVWLWLW*RLRLWL Trigger: CAGCCACAACCGCAACCGCAACCACAACCACAACCA...CACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
||
3UTR-3UTR CAA 90 bp | GGGAGTCTGAAGAACTGTCAGAGGCCTGGACATTATCAGCTGTGCGTTCCTTGTAGCAGACCTCCTCACTaGTGGTTCAGGAGTGGGGTC | + |
Preference number: 3 (lower is better) Translates to: GSLKNCQRPGHYQLCVPCSRPPH*WFRSGV Trigger: GACCCCACTCCTGAACCACAAGTGAGGAGGTCTGCT...ACAAGGAACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTCTTCAGACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | ACGCAGCTGGTGACTATACTGTGGCCATTTACAGGTGATCTCCGTGGTAGACTCAGCAGACCTCCTCACTaGTGGTTCAGGAGTGGGGTC | + |
Preference number: 3 (lower is better) Translates to: TQLVTILWPFTGDLRGRLSRPPH*WFRSGV Trigger: GACCCCACTCCTGAACCACAAGTGAGGAGGTCTGCT...GAGTCTACCACGGAGATCACCTGTAAATGGCCACAGTATAGTCACCAGCTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | CTACTGTCTTACTTGGGCTTGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTGTGGTTGTGGTTGTGGTaGTGGTTGCGGTTGCGGTTG | + |
Preference number: 3 (lower is better) Translates to: LLSYLGLRFGVVVVVVVVWLWLW*WLRLRL Trigger: CAACCGCAACCGCAACCACAACCACAACCACAACCA...CACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR TCA 72 bp | CTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTaGCTTGTTTTGATGACGGGCAGTTATTCGGTGAGG | + |
Preference number: 3 (lower is better) Translates to: LVGVSCGTAADV*LVLMTGSYSVR Trigger: CCTCACCGAATAACTGCCCGTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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3UTR CCA 72 bp | GTCTTTGTCTGGGAGTCTGAAGAACTGTCAGAGGCCTaGACATTATCAGCTGTGCGTTCCTTGTCATTGGCT | + |
Preference number: 3 (lower is better) Translates to: VFVWESEELSEA*TLSAVRSLSLA Trigger: AGCCAATGACAAGGAACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR-3UTR CAA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACGTTTTATTGCACACCTaGGAGGAGAGATGTTACACG | + |
Preference number: 3 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDVLLHT*EERCYT Trigger: CGTGTAACATCTCTCCTCCAAGGTGTGCAATAAAAC...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | CTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTGAGCGCATGGGCAGCTaGGCGGAGCCCAGAGTCCCA | + |
Preference number: 4 (lower is better) Translates to: LTCGGLPGGCFMWHCGRCERMGS*AEPRVP Trigger: TGGGACTCTGGGCTCCGCTCAGCTGCCCATGCGCTC...ACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAGGGTGGTTGCGGAGGCTGTTGCTaGGGCTGCCGATCGGCCTGT | + |
Preference number: 4 (lower is better) Translates to: APWAGVSRSCGPHVCKGGCGGCC*GCRSAC Trigger: ACAGGCCGATCGGCAGCCGCAGCAACAGCCTCCGCA...ACCACCCTTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAGGGTGGTGGGTGCAGTTGTGGCTaGTGGCGCTGCTGCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: APWAGVSRSCGPHVCKGGGCSCG*WRCCCW Trigger: CCAGCAGCAGCAGCGCCAGCAGCCACAACTGCACCC...ACCACCCTTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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3UTR CAA 72 bp | GAGGGGTCTGGTGGTTTGTTCCCGTGTGGCGGCCTGTaGTGCGATTGTGTCCCAAGGTCCGGCCTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: EGSGGLFPCGGL*CDCVPRSGLLA Trigger: AGCCAGCAGGCCGGACCTTGGGACACAATCGCACAACAGGCCGCCACACGGGAACAAACCACCAGACCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CAA 72 bp | GTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTaGGAACCTGCGTCCCCTGGCTCCACAGGAGCCTTG | + |
Preference number: 4 (lower is better) Translates to: VPATCVFWPCLF*EPASPGSTGAL Trigger: CAAGGCTCCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | GTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCCTCGGAGGGTGCTaGGGTGCCGGCCACCTGTGT | + |
Preference number: 4 (lower is better) Translates to: VFHVAPWAGVSRSCGPHVCLGGC*GAGHLC Trigger: ACACAGGTGGCCGGCACCTCAGCACCCTCCGAGGCA...CACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | AGGTCTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGCCACAGGAGCCTTGCTaGCAGCCTGGTTGGGGTCAG | + |
Preference number: 4 (lower is better) Translates to: RSDVWRPAWWVFHVALRQPQEPC*QPGWGQ Trigger: CTGACCCCAACCAGGCTGGCAGCAAGGCTCCTGTGG...CTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAGACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGCAAGGTCCGGCCTGCTaGCTGGGAGGCACCTCCCGA | + |
Preference number: 4 (lower is better) Translates to: VFHVAPWAGVSRSCGPHVQGPAC*LGGTSR Trigger: TCGGGAGGTGCCTCCCAGCCAGCAGGCCGGACCTTG...CACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTCAAGGTCCGGCCTGCTaGCTGGGAGGCACCTCCCGA | + |
Preference number: 4 (lower is better) Translates to: DVWRPAWWVFHVALRQMFQGPAC*LGGTSR Trigger: TCGGGAGGTGCCTCCCAGCCAGCAGGCCGGACCTTG...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | GCGGAGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCCTCGATAGCTTTGACTaGAGCATATGCGGGGTATAC | + |
Preference number: 4 (lower is better) Translates to: AEPRVPLGSRARCAALGVLDSFD*SICGVY Trigger: GTATACCCCGCATATGCTTCAGTCAAAGCTATCGAG...GACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCTCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | GCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAGGGTGGTCCTGTGGCGGAGACCTaGGGGGTCTGGTGGTTTGTT | + |
Preference number: 4 (lower is better) Translates to: APWAGVSRSCGPHVCKGGPVAET*GVWWFV Trigger: AACAAACCACCAGACCCCTCAGGTCTCCGCCACAGG...ACCACCCTTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | TGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCTGCGGAGGCTGTTGCTaGGGCTGCCGATCGGCCTGT | + |
Preference number: 4 (lower is better) Translates to: WSSVSCGSLGRGLSVLWPCGGCC*GCRSAC Trigger: ACAGGCCGATCGGCAGCCGCAGCAACAGCCTCCGCA...GGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | CTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTCCACAGGAGCCTTGCTaGCAGCCTGGTTGGGGTCAG | + |
Preference number: 4 (lower is better) Translates to: LTCGGLPGGCFMWHCGRCPQEPC*QPGWGQ Trigger: CTGACCCCAACCAGGCTGGCAGCAAGGCTCCTGTGG...ACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GTTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGGGCGGACAAAGGAGGTaGGGCCTGCCCCGTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: VTRGTTGWCFTCTFMGVLGGQRR*GLPRLP Trigger: GGGGAGACGGGGCAGGCCCCACCTCCTTTGTCCGCC...CAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | GTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGCTCGATAGCTTTGACTaGAGCATATGCGGGGTATAC | + |
Preference number: 4 (lower is better) Translates to: VPLGSRARCAALGVKLPRLDSFD*SICGVY Trigger: GTATACCCCGCATATGCTTCAGTCAAAGCTATCGAG...CCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCAGAGCGCATGGGCAGCTaGGCGGAGCCCAGAGTCCCA | + |
Preference number: 4 (lower is better) Translates to: GCFMWGCVKGVSLGSPRAERMGS*AEPRVP Trigger: TGGGACTCTGGGCTCCGCTCAGCTGCCCATGCGCTC...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | GTTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCCTCGGAGGGTGCTaGGGTGCCGGCCACCTGTGT | + |
Preference number: 4 (lower is better) Translates to: VTRGTTGWCFTCTFMGVLCLGGC*GAGHLC Trigger: ACACAGGTGGCCGGCACCTCAGCACCCTCCGAGGCA...CAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GAGGCTCTTGTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCATGGGGCTGCTGGGGCTaGTGCGGAGGCTGTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: EALVRCSGGLVFHVAPWAWGCWG*CGGCCC Trigger: GCAGCAACAGCCTCCGCAGCAGCCCCAGCAGCCCCA...TGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTACAAGAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | TTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGGCGGACAAAGGAGGTaGGGCCTGCCCCGTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: LHGGPRDGVSRAPSWVFCGGQRR*GLPRLP Trigger: GGGGAGACGGGGCAGGCCCCACCTCCTTTGTCCGCC...ACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GCTCTTGTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGCACGCTGTGCAGCCCTaGGAGTCAAACTGCCCCGGC | + |
Preference number: 4 (lower is better) Translates to: ALVRCSGGLVFHVAPWAGHAVQP*ESNCPG Trigger: GCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTG...CCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTACAAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGGCCTTGCTGCCAGCCTaGTTGGGGTCAGGGGATGTG | + |
Preference number: 4 (lower is better) Translates to: VFHVAPWAGVSRSCGPHVALLPA*LGSGDV Trigger: CACATCCCCTGACCCCAACCAGGCTGGCAGCAAGGC...CACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | AGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGA | + |
Preference number: 4 (lower is better) Translates to: SPESHWAVGHAVQPWESNTGVDR*RIRPDR Trigger: TCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGT...GTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | TGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCCCTGTGGCGGAGACCTaGGGGGTCTGGTGGTTTGTT | + |
Preference number: 4 (lower is better) Translates to: WSSVSCGSLGRGLSVLWPPVAET*GVWWFV Trigger: AACAAACCACCAGACCCCTCAGGTCTCCGCCACAGG...GGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GTGAGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGTGGGGCTGCTGGGGCTaGTGCGGAGGCTGTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: VRVFHVGLCKRCLTWESTWGCWG*CGGCCC Trigger: GCAGCAACAGCCTCCGCAGCAGCCCCAGCAGCCCCA...CGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GTTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGGGGTGCAGTTGTGGCTaGTGGCGCTGCTGCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: VTRGTTGWCFTCTFMGVLGCSCG*WRCCCW Trigger: CCAGCAGCAGCAGCGCCAGCAGCCACAACTGCACCC...CAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | TCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAACTGTGTGGAAGTGGGTaGAGTTGTGGCTGCTGGCGC | + |
Preference number: 4 (lower is better) Translates to: SCGSLGRGLSVLWPTCVQLCGSG*SCGCWR Trigger: GCGCCAGCAGCCACAACTGCACCCACTTCCACACAG...TTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
||
CDS-3UTR GCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTCTGTGTGGAAGTGGGTaGAGTTGTGGCTGCTGGCGC | + |
Preference number: 4 (lower is better) Translates to: DVWRPAWWVFHVALRQMFLCGSG*SCGCWR Trigger: GCGCCAGCAGCCACAACTGCACCCACTTCCACACAG...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
||
CDS-3UTR GCA 90 bp | GTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTGCTCCACAGGAGCCTTaGTGCCAGCCTGGTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: VRCSGGLVFHVAPWAGVSAPQEP*CQPGWG Trigger: ACCCCAACCAGGCTGGCAGCAAGGCTCCTGTGGAGC...AGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
||
CDS-3UTR CCA 90 bp | AGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACGTCGTCTTCCTTGCTTaGGCTCTCGATAGCTTTGAC | + |
Preference number: 4 (lower is better) Translates to: SPESHWAVGHAVQPWESNVVFLA*ALDSFD Trigger: GTCAAAGCTATCGAGAGCCCAAGCAAGGAAGACGAC...GTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTCACGCTGTGCAGCCCTaGGAGTCAAACTGCCCCGGC | + |
Preference number: 4 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCHAVQP*ESNCPG Trigger: GCCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTG...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | GTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGAGAGAGGAATCAGAGTaGCAGGGGACCAGTGCCTCG | + |
Preference number: 4 (lower is better) Translates to: VFHVAPWAGVSRSCGPHVREESE*QGTSAS Trigger: CGAGGCACTGGTCCCCTGTCACTCTGATTCCTCTCT...CACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGCTCCACAGGAGCCTTaGTGCCAGCCTGGTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCAPQEP*CQPGWG Trigger: ACCCCAACCAGGCTGGCAGCAAGGCTCCTGTGGAGC...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | TCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAACTTGTTCTTGGAACCTaGGTCCCCTGGCTCCACAGG | + |
Preference number: 4 (lower is better) Translates to: SCGSLGRGLSVLWPTCVQLVLGT*VPWLHR Trigger: CCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAG...TTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAGGGTGGTTGTGTCTTCTGGCCCTaGTTGTTCTTGGAACCTGCG | + |
Preference number: 4 (lower is better) Translates to: APWAGVSRSCGPHVCKGGCVFWP*LFLEPA Trigger: CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACA...ACCACCCTTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | CCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACCGTCGTCTTCCTTGCTTaGGCTCTCGATAGCTTTGAC | + |
Preference number: 4 (lower is better) Translates to: PGLAGNLGAAGRNSGQLTVVFLA*ALDSFD Trigger: GTCAAAGCTATCGAGAGCCCAAGCAAGGAAGACGAC...GGTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | CGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGAGGGTGGCCTTGCTGCCAGCCTaGTTGGGGTCAGGGGATGTG | + |
Preference number: 4 (lower is better) Translates to: RDGVSRAPSWVFCAAVRVALLPA*LGSGDV Trigger: CACATCCCCTGACCCCAACCAGGCTGGCAGCAAGGC...CACCCTCACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAGGGTGGTTTGTGGCTGAGGCTGTaGTTGCAGTGGTGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: APWAGVSRSCGPHVCKGGLWLRL*LQWCLC Trigger: ACAAAGACACCACTGCAACCACAGCCTCAGCCACAA...ACCACCCTTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGCTGGGAATCTaGGAGCCGCTGGCAGAAACA | + |
Preference number: 4 (lower is better) Translates to: DVWRPAWWVFHVALRQMFDLLGI*EPLAET Trigger: TGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTC...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | AGGTCTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGCTCGATAGCTTTGACTaGAGCATATGCGGGGTATAC | + |
Preference number: 4 (lower is better) Translates to: RSDVWRPAWWVFHVALRQLDSFD*SICGVY Trigger: GTATACCCCGCATATGCTTCAGTCAAAGCTATCGAG...CTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | GGCTGGGGAATCCGCACACAGACTGCCAGCAGACCTCCTCACTTGTGGTTCAGGACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGA | + |
Preference number: 4 (lower is better) Translates to: GWGIRTQTASRPPHLWFRTGVDR*RIRPDR Trigger: TCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGT...CCTGAACCACAAGTGAGGAGGTCTGCTGGCAGTCTGTGTGCGGATTCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTCTTTGTCTGGGAGTCTaGAGAACTGTCAGAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: DVWRPAWWVFHVALRQMFLCLGV*RTVRGL Trigger: CAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAG...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCAGAGAGGAATCAGAGTaGCAGGGGACCAGTGCCTCG | + |
Preference number: 4 (lower is better) Translates to: RVFHVGLCKRCLTWESTGREESE*QGTSAS Trigger: CGAGGCACTGGTCCCCTGTCACTCTGATTCCTCTCT...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | AGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTCTAGAGCCATGTGGTaGTTTAGAAAGAGTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: SPESHWAVGHAVQPWESNSRAMW*FRKSGL Trigger: AAGACCACTCTTTCTAAAGCACCACATGGCTCTAGA...GTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR GCA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCACTTGTTCTTGGAACCTaGGTCCCCTGGCTCCACAGG | + |
Preference number: 4 (lower is better) Translates to: GCFMWGCVKGVSLGSPRALVLGT*VPWLHR Trigger: CCTGTGGAGCCAGGGGACGCAGGTTCCAAGAACAAG...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTTGTGTCTTCTGGCCCTaGTTGTTCTTGGAACCTGCG | + |
Preference number: 4 (lower is better) Translates to: DVWRPAWWVFHVALRQMFCVFWP*LFLEPA Trigger: CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACA...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | CTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTGTCGTCTTCCTTGCTTaGGCTCTCGATAGCTTTGAC | + |
Preference number: 4 (lower is better) Translates to: LTCGGLPGGCFMWHCGRCVVFLA*ALDSFD Trigger: GTCAAAGCTATCGAGAGCCCAAGCAAGGAAGACGAC...ACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | AGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGACTTGCTGGGAATCTaGGAGCCGCTGGCAGAAACA | + |
Preference number: 4 (lower is better) Translates to: SVSCGSLGRGLSVLWPTCDLLGI*EPLAET Trigger: TGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTC...ACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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3UTR CAA 72 bp | GCGGTTGTGGCTGAGGCTGTGGTTGCAGTGGTGTCTTaGTCTGGGAGTCTGAAGAACTGTCAGAGGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: AVVAEAVVAVVS*SGSLKNCQRPG Trigger: TCCAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAGACACCACTGCAACCACAGCCTCAGCCACAACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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3UTR CAA 72 bp | TGGCCCGTGAGGGGCTTCCTACTGTCTTACTTGGGCTaGAGGTTCGGCGTTGTGGTTGTGGTTGTGGTTGTG | + |
Preference number: 4 (lower is better) Translates to: WPVRGFLLSYLG*RFGVVVVVVVV Trigger: CACAACCACAACCACAACCACAACGCCGAACCTCAAGCCCAAGTAAGACAGTAGGAAGCCCCTCACGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | TCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGA | + |
Preference number: 4 (lower is better) Translates to: SCGSLGRGLSVLWPTCVQTGVDR*RIRPDR Trigger: TCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGT...TTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | GAGCCTGAGCGGGTGGTTTTATTGCACACCTTGGAGGAGAGATGTTACACGGGGGGGTCTGACTTTACTTaGGGTCCAGTTCCAGAGCGG | + |
Preference number: 4 (lower is better) Translates to: EPERVVLLHTLEERCYTGGSDFT*GPVPER Trigger: CCGCTCTGGAACTGGACCCCAAGTAAAGTCAGACCC...CCCCGTGTAACATCTCTCCTCCAAGGTGTGCAATAAAACCACCCGCTCAGGCTC 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | AGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTTGCGTTCCTTGTCATTaGCTGGGGAATCCGCACACA | + |
Preference number: 4 (lower is better) Translates to: SVSCGSLGRGLSVLWPTCCVPCH*LGNPHT Trigger: TGTGTGCGGATTCCCCAGCCAATGACAAGGAACGCA...ACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAAGGGTGGTAGTGGTGTCTTTGTCTaGGAGTCTGAAGAACTGTCA | + |
Preference number: 4 (lower is better) Translates to: APWAGVSRSCGPHVCKGGSGVFV*ESEELS Trigger: TGACAGTTCTTCAGACTCCCAGACAAAGACACCACT...ACCACCCTTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GCTCTTGTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGAGGCTGTGGTTGCAGTaGTGTCTTTGTCTGGGAGTC | + |
Preference number: 4 (lower is better) Translates to: ALVRCSGGLVFHVAPWAGRLWLQ*CLCLGV Trigger: GACTCCCAGACAAAGACACCACTGCAACCACAGCCT...CCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTACAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | GTTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGCTTTGTCTGGGAGTCTaGAGAACTGTCAGAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: VTRGTTGWCFTCTFMGVLLCLGV*RTVRGL Trigger: CAGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAG...CAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GCTCTTGTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGAACTGTCAGAGGCCTaGACATTATCAGCTGTGCGT | + |
Preference number: 4 (lower is better) Translates to: ALVRCSGGLVFHVAPWAGELSEA*TLSAVR Trigger: ACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTC...CCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTACAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCAGGCTGTGGTTGCAGTaGTGTCTTTGTCTGGGAGTC | + |
Preference number: 4 (lower is better) Translates to: RVFHVGLCKRCLTWESTGRLWLQ*CLCLGV Trigger: GACTCCCAGACAAAGACACCACTGCAACCACAGCCT...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GAGGCTCTTGTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCATTGTGGTTGTGGTTGTaGTTGCGGTTGCGGTTGTGG | + |
Preference number: 4 (lower is better) Translates to: EALVRCSGGLVFHVAPWALWLWL*LRLRLW Trigger: CCACAACCGCAACCGCAACCACAACCACAACCACAA...TGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTACAAGAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | CGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGAGGGTGGCCACCTGTGTCTTCTaGCCCTGCTTGTTCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: RDGVSRAPSWVFCAAVRVATCVF*PCLFLE Trigger: TTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGC...CACCCTCACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GTTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGGCCACCTGTGTCTTCTaGCCCTGCTTGTTCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: VTRGTTGWCFTCTFMGVLATCVF*PCLFLE Trigger: TTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGC...CAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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3UTR CAA 72 bp | ACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTaGTGCTGCTGTGAGGGTGTTTCATGTGGGGCTGTG | + |
Preference number: 4 (lower is better) Translates to: TGWCFTCTFMGV*CCCEGVSCGAV Trigger: CACAGCCCCACATGAAACACCCTCACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | AGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTCTCGATAGCTTTGACTaGAGCATATGCGGGGTATAC | + |
Preference number: 4 (lower is better) Translates to: SVSCGSLGRGLSVLWPTCLDSFD*SICGVY Trigger: GTATACCCCGCATATGCTTCAGTCAAAGCTATCGAG...ACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGTCGTCTTCCTTGCTTaGGCTCTCGATAGCTTTGAC | + |
Preference number: 4 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCVVFLA*ALDSFD Trigger: GTCAAAGCTATCGAGAGCCCAAGCAAGGAAGACGAC...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | GTGAGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGTGCGTTCCTTGTCATTaGCTGGGGAATCCGCACACA | + |
Preference number: 4 (lower is better) Translates to: VRVFHVGLCKRCLTWESTCVPCH*LGNPHT Trigger: TGTGTGCGGATTCCCCAGCCAATGACAAGGAACGCA...CGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGAACTGTCAGAGGCCTaGACATTATCAGCTGTGCGT | + |
Preference number: 4 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCELSEA*TLSAVR Trigger: ACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTC...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | TGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCAGTGGTGTCTTTGTCTaGGAGTCTGAAGAACTGTCA | + |
Preference number: 4 (lower is better) Translates to: WSSVSCGSLGRGLSVLWPSGVFV*ESEELS Trigger: TGACAGTTCTTCAGACTCCCAGACAAAGACACCACT...GGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCATTGTGGCTGAGGCTGTaGTTGCAGTGGTGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: GCFMWGCVKGVSLGSPRALWLRL*LQWCLC Trigger: ACAAAGACACCACTGCAACCACAGCCTCAGCCACAA...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CCA 90 bp | TTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTTTGTGGTTGTGGTTGTaGTTGCGGTTGCGGTTGTGG | + |
Preference number: 4 (lower is better) Translates to: LHGGPRDGVSRAPSWVFCLWLWL*LRLRLW Trigger: CCACAACCGCAACCGCAACCACAACCACAACCACAA...ACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR TCA 90 bp | GCTGTGGTTGCAGTGGTGTCTTTGTCTGGGAGTCTGAAGAACTGTCAGAGGCCTACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGA | + |
Preference number: 4 (lower is better) Translates to: AVVAVVSLSGSLKNCQRPTGVDR*RIRPDR Trigger: TCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGT...AGGCCTCTGACAGTTCTTCAGACTCCCAGACAAAGACACCACTGCAACCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | GTGAGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGA | + |
Preference number: 4 (lower is better) Translates to: VRVFHVGLCKRCLTWESTTGVDR*RIRPDR Trigger: TCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGT...CGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | GGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTCTGGTGACTATACTGTaGCCATTTACAGGTGATCTC | + |
Preference number: 4 (lower is better) Translates to: GGLPGGCFMWHCGRCLTCLVTIL*PFTGDL Trigger: GAGATCACCTGTAAATGGCCACAGTATAGTCACCAG...ACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR GCA 90 bp | GTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTTCTAGAGCCATGTGGTaGTTTAGAAAGAGTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: VRCSGGLVFHVAPWAGVSSRAMW*FRKSGL Trigger: AAGACCACTCTTTCTAAAGCACCACATGGCTCTAGA...AGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR GCA 90 bp | AGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTTCTAGAGCCATGTGGTaGTTTAGAAAGAGTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: SVSCGSLGRGLSVLWPTCSRAMW*FRKSGL Trigger: AAGACCACTCTTTCTAAAGCACCACATGGCTCTAGA...ACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | GGGAGTCTGAAGAACTGTCAGAGGCCTGGACATTATCAGCTGTGCGTTCCTTGTGTCGTCTTCCTTGCTTaGGCTCTCGATAGCTTTGAC | + |
Preference number: 4 (lower is better) Translates to: GSLKNCQRPGHYQLCVPCVVFLA*ALDSFD Trigger: GTCAAAGCTATCGAGAGCCCAAGCAAGGAAGACGAC...ACAAGGAACGCACAGCTGATAATGTCCAGGCCTCTGACAGTTCTTCAGACTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CCA 90 bp | CGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTGAGGGTGCTGGTGACTATACTGTaGCCATTTACAGGTGATCTC | + |
Preference number: 4 (lower is better) Translates to: RDGVSRAPSWVFCAAVRVLVTIL*PFTGDL Trigger: GAGATCACCTGTAAATGGCCACAGTATAGTCACCAG...CACCCTCACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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3UTR CAA 72 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTaGACTTGTTTTGATGACGGGCAGTTATTCGGTGAG | + |
Preference number: 4 (lower is better) Translates to: PGGCFMWHCGRC*TCFDDGQLFGE Trigger: CTCACCGAATAACTGCCCGTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGA | + |
Preference number: 4 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDTGVDR*RIRPDR Trigger: TCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGT...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR GCA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCTCTAGAGCCATGTGGTaGTTTAGAAAGAGTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: RVFHVGLCKRCLTWESTGSRAMW*FRKSGL Trigger: AAGACCACTCTTTCTAAAGCACCACATGGCTCTAGA...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR GCA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTTCTAGAGCCATGTGGTaGTTTAGAAAGAGTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCSRAMW*FRKSGL Trigger: AAGACCACTCTTTCTAAAGCACCACATGGCTCTAGA...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR TCA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACCTCGATAGCTTTGACTaGAGCATATGCGGGGTATAC | + |
Preference number: 4 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDLDSFD*SICGVY Trigger: GTATACCCCGCATATGCTTCAGTCAAAGCTATCGAG...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS TCA 90 bp | CTGGCGCAGACCGTCCATGGCAGCGGCGGGCGCGGGGCAGGCCACTaGAGCACGCCCGCAACCTCGCGCACCGGCGCCGCCGAGAGCGCA | + |
Preference number: 5 (lower is better) Translates to: LAQTVHGSGGRGAGH*STPATSRTGAAESA Trigger: TGCGCTCTCGGCGGCGCCGGTGCGCGAGGTTGCGGGCGTGCTTCAGTGGCCTGCCCCGCGCCCGCCGCTGCCATGGACGGTCTGCGCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS GCA 90 bp | GGCGAGGGCTCCCGCGGCGAGATACCGCTTCTCTACACCGGTCCTTaGTTCGAGCGCCCCGAGCGCTTCGGTGGCCACGTTCTTCTGTTC | + |
Preference number: 5 (lower is better) Translates to: GEGSRGEIPLLYTGP*FERPERFGGHVLLF Trigger: GAACAGAAGAACGTGGCCACCGAAGCGCTCGGGGCGCTCGAAGCAAGGACCGGTGTAGAGAAGCGGTATCTCGCCGCGGGAGCCCTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS CCA 90 bp | TCTTCTGTTCCAGAAAACGTTCGAAGCGCTGGCGCAGACCGTCCATaGCAGCGGCGGGCGCGGGGCAGGCCACTGAAGCACGCCCGCAAC | + |
Preference number: 5 (lower is better) Translates to: SSVPENVRSAGADRP*QRRARGRPLKHARN Trigger: GTTGCGGGCGTGCTTCAGTGGCCTGCCCCGCGCCCGCCGCTGCCATGGACGGTCTGCGCCAGCGCTTCGAACGTTTTCTGGAACAGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS CCA 90 bp | GCTTCGGTGGCCACGTTCTTCTGTTCCAGAAAACGTTCGAAGCGCTaGCGCAGACCGTCCATGGCAGCGGCGGGCGCGGGGCAGGCCACT | + |
Preference number: 5 (lower is better) Translates to: ASVATFFCSRKRSKR*RRPSMAAAGAGQAT Trigger: AGTGGCCTGCCCCGCGCCCGCCGCTGCCATGGACGGTCTGCGCCAGCGCTTCGAACGTTTTCTGGAACAGAAGAACGTGGCCACCGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | GCCCCGGCTGCGATGGGGCCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAACAAATCCGATGACATaGCACAGTAGAGAGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: APAAMGPGLAGNLGAAGRTNPMT*HSREAP Trigger: CGGGGCCTCTCTACTGTGCAATGTCATCGGATTTGT...TCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGCCCCATCGCAGCCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGCCCCGGACAGTGTCGTCTTCCTaGCTTGGGCTCTCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: VPLGSRARCAALGVKLPRTVSSS*LGLSIA Trigger: AGCTATCGAGAGCCCAAGCAAGGAAGACGACACTGT...CCGGGGCAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGGGCTCCACAGGAGCCTaGCTGCCAGCCTGGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: VFHVAPWAGVSRSCGPHVGSTGA*LPAWLG Trigger: CCCCAACCAGGCTGGCAGCAAGGCTCCTGTGGAGCC...CACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGAAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | GTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTGGCTCCACAGGAGCCTaGCTGCCAGCCTGGTTGGGG | + |
Preference number: 5 (lower is better) Translates to: VRCSGGLVFHVAPWAGVSGSTGA*LPAWLG Trigger: CCCCAACCAGGCTGGCAGCAAGGCTCCTGTGGAGCC...AGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS TCA 90 bp | GATGTTGATGCTGGGGTGACGAGAGCCCGGCCCCGAGCCAAGGCCTaGAGTACGTCCCGGGTTATCCCAGCTGCTAGGTCCAATGCTCTT | + |
Preference number: 5 (lower is better) Translates to: DVDAGVTRARPRAKA*STSRVIPAARSNAL Trigger: AAGAGCATTGGACCTAGCAGCTGGGATAACCCGGGACGTACTTCAGGCCTTGGCTCGGGGCCGGGCTCTCGTCACCCCAGCATCAACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | CCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACTGACAGTGTCGTCTTCCTaGCTTGGGCTCTCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: PRVPLGSRARCAALGVKLTVSSS*LGLSIA Trigger: AGCTATCGAGAGCCCAAGCAAGGAAGACGACACTGT...CAGTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | AGCCCAGAGTCCCACTGGGCAGTCGGGCACGCTGTGCAGCCCTGGGAGTCAAACACAGTGTCGTCTTCCTaGCTTGGGCTCTCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: SPESHWAVGHAVQPWESNTVSSS*LGLSIA Trigger: AGCTATCGAGAGCCCAAGCAAGGAAGACGACACTGT...GTTTGACTCCCAGGGCTGCACAGCGTGCCCGACTGCCCAGTGGGACTCTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GCCGGGACTTGCTGGGAATCTGGGAGCCGCTGGCAGAAACAGTGGCCAGCTGACACAAATCCGATGACATaGCACAGTAGAGAGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: AGTCWESGSRWQKQWPADTNPMT*HSREAP Trigger: CGGGGCCTCTCTACTGTGCAATGTCATCGGATTTGT...GTCAGCTGGCCACTGTTTCTGCCAGCGGCTCCCAGATTCCCAGCAAGTCCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GTACGGTGCTCAGGTGGTCTAGTGTTTCATGTGGCTCCTTGGGCAGGGGTCTCTTTGCTGCCAGCCTGGTaGGGGTCAGGGGATGTGCTG | + |
Preference number: 5 (lower is better) Translates to: VRCSGGLVFHVAPWAGVSLLPAW*GSGDVL Trigger: CAGCACATCCCCTGACCCCAACCAGGCTGGCAGCAA...AGAGACCCCTGCCCAAGGAGCCACATGAAACACTAGACCACCTGAGCACCGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | CTGACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTGTCTTCTGGCCCTGCTaGTTCTTGGAACCTGCGTCC | + |
Preference number: 5 (lower is better) Translates to: LTCGGLPGGCFMWHCGRCVFWPC*FLEPAS Trigger: GGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGAC...ACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | GCTGAGGTGCCGGCCACCTGTGTCTTCTGGCCCTGCTTGTTCTTGGAACCTGCGACAAATCCGATGACATaGCACAGTAGAGAGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: AEVPATCVFWPCLFLEPATNPMT*HSREAP Trigger: CGGGGCCTCTCTACTGTGCAATGTCATCGGATTTGT...CGCAGGTTCCAAGAACAAGCAGGGCCAGAAGACACAGGTGGCCGGCACCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTTGGTTGTGGTTGTGGTaGCGGTTGCGGTTGTGGCTG | + |
Preference number: 5 (lower is better) Translates to: DVWRPAWWVFHVALRQMFWLWLW*RLRLWL Trigger: CAGCCACAACCGCAACCGCAACCACAACCACAACCA...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS CCA 90 bp | GCAGACCTCCTCACTTGTGGTTCAGGAGTGGGGTCTGACTTTACTTaGCGTCCCGGGTTATCCCAGCTGCTAGGTCCAATGCTCTTCCGC | + |
Preference number: 5 (lower is better) Translates to: ADLLTCGSGVGSDFT*RPGLSQLLGPMLFR Trigger: GCGGAAGAGCATTGGACCTAGCAGCTGGGATAACCCGGGACGCCAAGTAAAGTCAGACCCCACTCCTGAACCACAAGTGAGGAGGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105357.2 |
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CDS-3UTR CAA 90 bp | GGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTAGCAGACCTCCTCACTaGTGGTTCAGGAGTGGGGTC | + |
Preference number: 5 (lower is better) Translates to: GGLPGGCFMWHCGRCLTCSRPPH*WFRSGV Trigger: GACCCCACTCCTGAACCACAAGTGAGGAGGTCTGCT...ACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | TCATGTGGCTCCTTGGGCAGGGGTCTCTCGGTCTTGTGGCCCACATGTGTGCAATGGCTGAGGCTGTGGTaGCAGTGGTGTCTTTGTCTG | + |
Preference number: 5 (lower is better) Translates to: SCGSLGRGLSVLWPTCVQWLRLW*QWCLCL Trigger: CAGACAAAGACACCACTGCAACCACAGCCTCAGCCA...TTGCACACATGTGGGCCACAAGACCGAGAGACCCCTGCCCAAGGAGCCACATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | TTACACGGGGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTTTGCTGCCAGCCTGGTaGGGGTCAGGGGATGTGCTG | + |
Preference number: 5 (lower is better) Translates to: LHGGPRDGVSRAPSWVFCLLPAW*GSGDVL Trigger: CAGCACATCCCCTGACCCCAACCAGGCTGGCAGCAA...ACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCCCCGTGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS CCA 90 bp | TCCCGGGTTATCCCAGCTGCTAGGTCCAATGCTCTTCCGCTTAGCTaGCTCGCGGCGCTGTCTAGAGCCATGTGGTGCTTTAGAAAGAGT | + |
Preference number: 5 (lower is better) Translates to: SRVIPAARSNALPLS*LAALSRAMWCFRKS Trigger: ACTCTTTCTAAAGCACCACATGGCTCTAGACAGCGCCGCGAGCCAGCTAAGCGGAAGAGCATTGGACCTAGCAGCTGGGATAACCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GACGTGTGGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTACAGTGTCGTCTTCCTaGCTTGGGCTCTCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: DVWRPAWWVFHVALRQMFTVSSS*LGLSIA Trigger: AGCTATCGAGAGCCCAAGCAAGGAAGACGACACTGT...AAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCCACACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTAGCAGACCTCCTCACTaGTGGTTCAGGAGTGGGGTC | + |
Preference number: 5 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCSRPPH*WFRSGV Trigger: GACCCCACTCCTGAACCACAAGTGAGGAGGTCTGCT...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | GGGACCACGGGATGGTGTTTCACGTGCACCTTCATGGGTGTTTTGTGCTGCTGTTGGTTGTGGTTGTGGTaGCGGTTGCGGTTGTGGCTG | + |
Preference number: 5 (lower is better) Translates to: GTTGWCFTCTFMGVLCCCWLWLW*RLRLWL Trigger: CAGCCACAACCGCAACCGCAACCACAACCACAACCA...ACAGCAGCACAAAACACCCATGAAGGTGCACGTGAAACACCATCCCGTGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCGTCTTCTGGCCCTGCTaGTTCTTGGAACCTGCGTCC | + |
Preference number: 5 (lower is better) Translates to: RVFHVGLCKRCLTWESTGVFWPC*FLEPAS Trigger: GGACGCAGGTTCCAAGAACAAGCAGGGCCAGAAGAC...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS TCA 90 bp | GCTTGCCCGCGTAGTAGAAAGGGAACCAGAACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGAACAGGGCGTACACCACCCAGTAGG | + |
Preference number: 5 (lower is better) Translates to: ACPRSRKGTRTGVDR*RIRPDRTGRTPPSR Trigger: CCTACTGGGTGGTGTACGCCCTGTTCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGTTCTGGTTCCCTTTCTACTACGCGGGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040081.7 |
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CDS GCA 90 bp | CGCGATGGTATAGTAGTAATGCCCCGTTCCAGGGTCCGGGCGTCATaGAAAATAACAGGAAGGCGCACTTGCCCGCGTAGTAGAAAGGGA | + |
Preference number: 5 (lower is better) Translates to: RDGIVVMPRSRVRAS*KITGRRTCPRSRKG Trigger: TCCCTTTCTACTACGCGGGCAAGTGCGCCTTCCTGTTATTTTGCATGACGCCCGGACCCTGGAACGGGGCATTACTACTATACCATCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GGAGGCCTGCCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTACAGTGTCGTCTTCCTaGCTTGGGCTCTCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: GGLPGGCFMWHCGRCLTCTVSSS*LGLSIA Trigger: AGCTATCGAGAGCCCAAGCAAGGAAGACGACACTGT...ACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGGCAGGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCTGGCTGAGGCTGTGGTaGCAGTGGTGTCTTTGTCTG | + |
Preference number: 5 (lower is better) Translates to: RVFHVGLCKRCLTWESTGWLRLW*QWCLCL Trigger: CAGACAAAGACACCACTGCAACCACAGCCTCAGCCA...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS-3UTR CAA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCATGGTTGTGGTTGTGGTaGTGGTTGCGGTTGCGGTTG | + |
Preference number: 5 (lower is better) Translates to: GCFMWGCVKGVSLGSPRAWLWLW*WLRLRL Trigger: CAACCGCAACCGCAACCACAACCACAACCACAACCA...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS TCA 90 bp | ACTTGCCCGCGTAGTAGAAAGGGAACCAGAACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGAACAGGGCGTACACCACCCAGTAGG | + |
Preference number: 5 (lower is better) Translates to: TCPRSRKGTRTGVDR*RIRPDRTGRTPPSR Trigger: CCTACTGGGTGGTGTACGCCCTGTTCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGTTCTGGTTCCCTTTCTACTACGCGGGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | AGGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCACAAATCCGATGACATaGCACAGTAGAGAGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: RVFHVGLCKRCLTWESTGTNPMT*HSREAP Trigger: CGGGGCCTCTCTACTGTGCAATGTCATCGGATTTGT...GCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | GGGTGTTTCATGTGGGGCTGTGTAAAAGGTGTCTCACTTGGGAGTCCACGGGCAACAAATCCGATGACATaGCACAGTAGAGAGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: GCFMWGCVKGVSLGSPRATNPMT*HSREAP Trigger: CGGGGCCTCTCTACTGTGCAATGTCATCGGATTTGT...TGCCCGTGGACTCCCAAGTGAGACACCTTTTACACAGCCCCACATGAAACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS CCA 90 bp | TCTAGAGCCATGTGGTGCTTTAGAAAGAGTGGTCTTATGACGCGATaGTATAGTAGTAATGCCCCGTTCCAGGGTCCGGGCGTCATGCAA | + |
Preference number: 5 (lower is better) Translates to: SRAMWCFRKSGLMTR*YSSNAPFQGPGVMQ Trigger: TTGCATGACGCCCGGACCCTGGAACGGGGCATTACTACTATACCATCGCGTCATAAGACCACTCTTTCTAAAGCACCACATGGCTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS-3UTR CAA 90 bp | CCTGGTGGGTGTTTCATGTGGCACTGCGGCAGATGTTTGACTTGTTTTGATGACACAGTGTCGTCTTCCTaGCTTGGGCTCTCGATAGCT | + |
Preference number: 5 (lower is better) Translates to: PGGCFMWHCGRCLTCFDDTVSSS*LGLSIA Trigger: AGCTATCGAGAGCCCAAGCAAGGAAGACGACACTGT...GTCATCAAAACAAGTCAAACATCTGCCGCAGTGCCACATGAAACACCCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS CCA 72 bp | CCAGAAAACGTTCGAAGCGCTGGCGCAGACCGTCCATaGCAGCGGCGGGCGCGGGGCAGGCCACTGAAGCAC | + |
Preference number: 6 (lower is better) Translates to: PENVRSAGADRP*QRRARGRPLKH Trigger: GTGCTTCAGTGGCCTGCCCCGCGCCCGCCGCTGCCATGGACGGTCTGCGCCAGCGCTTCGAACGTTTTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS CAA 72 bp | CTCCCGCGGCGAGATACCGCTTCTCTACACCGGTCCTaGCTTCGAGCGCCCCGAGCGCTTCGGTGGCCACGT | + |
Preference number: 6 (lower is better) Translates to: LPRRDTASLHRS*LRAPRALRWPR Trigger: ACGTGGCCACCGAAGCGCTCGGGGCGCTCGAAGCAAGGACCGGTGTAGAGAAGCGGTATCTCGCCGCGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS CAA 90 bp | GGGCGAGGGCTCCCGCGGCGAGATACCGCTTCTCTACACCGGTCCTaGCTTCGAGCGCCCCGAGCGCTTCGGTGGCCACGTTCTTCTGTT | + |
Preference number: 6 (lower is better) Translates to: GRGLPRRDTASLHRS*LRAPRALRWPRSSV Trigger: AACAGAAGAACGTGGCCACCGAAGCGCTCGGGGCGCTCGAAGCAAGGACCGGTGTAGAGAAGCGGTATCTCGCCGCGGGAGCCCTCGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS GCA 72 bp | TCCCGCGGCGAGATACCGCTTCTCTACACCGGTCCTTaGTTCGAGCGCCCCGAGCGCTTCGGTGGCCACGTT | + |
Preference number: 6 (lower is better) Translates to: SRGEIPLLYTGP*FERPERFGGHV Trigger: AACGTGGCCACCGAAGCGCTCGGGGCGCTCGAAGCAAGGACCGGTGTAGAGAAGCGGTATCTCGCCGCGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS CCA 72 bp | GCCACGTTCTTCTGTTCCAGAAAACGTTCGAAGCGCTaGCGCAGACCGTCCATGGCAGCGGCGGGCGCGGGG | + |
Preference number: 6 (lower is better) Translates to: ATFFCSRKRSKR*RRPSMAAAGAG Trigger: CCCCGCGCCCGCCGCTGCCATGGACGGTCTGCGCCAGCGCTTCGAACGTTTTCTGGAACAGAAGAACGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105357.2 ENSMUST00000105358.8 |
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CDS CCA 72 bp | ATCCCAGCTGCTAGGTCCAATGCTCTTCCGCTTAGCTaGCTCGCGGCGCTGTCTAGAGCCATGTGGTGCTTT | + |
Preference number: 6 (lower is better) Translates to: IPAARSNALPLS*LAALSRAMWCF Trigger: AAAGCACCACATGGCTCTAGACAGCGCCGCGAGCCAGCTAAGCGGAAGAGCATTGGACCTAGCAGCTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS GCA 72 bp | ATAGTAGTAATGCCCCGTTCCAGGGTCCGGGCGTCATaGAAAATAACAGGAAGGCGCACTTGCCCGCGTAGT | + |
Preference number: 6 (lower is better) Translates to: IVVMPRSRVRAS*KITGRRTCPRS Trigger: ACTACGCGGGCAAGTGCGCCTTCCTGTTATTTTGCATGACGCCCGGACCCTGGAACGGGGCATTACTACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS TCA 72 bp | CGTAGTAGAAAGGGAACCAGAACAGGAGTAGATCGCTaGAGAATTCGACCAGACCGAACAGGGCGTACACCA | + |
Preference number: 6 (lower is better) Translates to: RSRKGTRTGVDR*RIRPDRTGRTP Trigger: TGGTGTACGCCCTGTTCGGTCTGGTCGAATTCTTCAGCGATCTACTCCTGTTCTGGTTCCCTTTCTACTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000040081.7 ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS CCA 72 bp | ATGTGGTGCTTTAGAAAGAGTGGTCTTATGACGCGATaGTATAGTAGTAATGCCCCGTTCCAGGGTCCGGGC | + |
Preference number: 6 (lower is better) Translates to: MWCFRKSGLMTR*YSSNAPFQGPG Trigger: GCCCGGACCCTGGAACGGGGCATTACTACTATACCATCGCGTCATAAGACCACTCTTTCTAAAGCACCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |
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CDS TCA 72 bp | CTAGAGCCATGTGGTGCTTTAGAAAGAGTGGTCTTATaGCGCGATGGTATAGTAGTAATGCCCCGTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: LEPCGALERVVL*RDGIVVMPRSR Trigger: CCTGGAACGGGGCATTACTACTATACCATCGCGTCATAAGACCACTCTTTCTAAAGCACCACATGGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105354.8 ENSMUST00000105355.8 ENSMUST00000105357.2 ENSMUST00000105358.8 ENSMUST00000186864.7 |