Pregenerated sensors for REEP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005873Ensembl transcript IDs: ENSMUST00000006027.7, ENSMUST00000235153.2, ENSMUST00000235227.2, ENSMUST00000236887.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGACCTCCAGCCTCGGCAGGTGGTCTCCCTTCTCAGGTCACAGGTaGCGTCTACAAGCCTCTCCTGGCCTCTTCCTCACAAGCACTGTG | + |
|
Preference number: 1 (lower is better) Translates to: QTSSLGRWSPFSGHR*RLQASPGLFLTSTV Trigger: CACAGTGCTTGTGAGGAAGAGGCCAGGAGAGGCTTGTAGACGCCACCTGTGACCTGAGAAGGGAGACCACCTGCCGAGGCTGGAGGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR TCA 90 bp | CCACAAAGGTTTCCTAACTGTAAGCACAAGGAGACGCATGCAGAGTaGGCCCCGCAGAGCACGGGGCCTACAGACAGAGATTCCCAACCC | + |
|
Preference number: 1 (lower is better) Translates to: PQRFPNCKHKETHAE*APQSTGPTDRDSQP Trigger: GGGTTGGGAATCTCTGTCTGTAGGCCCCGTGCTCTGCGGGGCTCACTCTGCATGCGTCTCCTTGTGCTTACAGTTAGGAAACCTTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR TCA 90 bp | GGGAAACTGGAGCTGATCACGGGTTCGAGTCTTACTCGCTTGCATTaGTTTCTGAAACGTTATTGGAAGCTCAGACCTCCAGCCTCGGCA | + |
|
Preference number: 1 (lower is better) Translates to: GKLELITGSSLTRLH*FLKRYWKLRPPASA Trigger: TGCCGAGGCTGGAGGTCTGAGCTTCCAATAACGTTTCAGAAATCAATGCAAGCGAGTAAGACTCGAACCCGTGATCAGCTCCAGTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 90 bp | GAGAGACTAAGGACCTTGTTAGCCAGCTTTCAGGTAAACCATAAATaGCTGGCATTTCAGCATCTCAGAGGAGGAGCAGGGGAGATGGTG | + |
|
Preference number: 1 (lower is better) Translates to: ERLRTLLASFQVNHK*LAFQHLRGGAGEMV Trigger: CACCATCTCCCCTGCTCCTCCTCTGAGATGCTGAAATGCCAGCCATTTATGGTTTACCTGAAAGCTGGCTAACAAGGTCCTTAGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 90 bp | ACAGGCAAGAACTTCCTTACAGGCCTTGGCTGTTTTCTGCAGGTGTaGATGGAGGACCTTCCCACAATGTCAGGAAATAATTGCTGCACG | + |
|
Preference number: 1 (lower is better) Translates to: TGKNFLTGLGCFLQV*MEDLPTMSGNNCCT Trigger: CGTGCAGCAATTATTTCCTGACATTGTGGGAAGGTCCTCCATCCACACCTGCAGAAAACAGCCAAGGCCTGTAAGGAAGTTCTTGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 90 bp | GCAAGAACTTCCTTACAGGCCTTGGCTGTTTTCTGCAGGTGTGGATaGAGGACCTTCCCACAATGTCAGGAAATAATTGCTGCACGAACT | + |
|
Preference number: 1 (lower is better) Translates to: ARTSLQALAVFCRCG*RTFPQCQEIIAART Trigger: AGTTCGTGCAGCAATTATTTCCTGACATTGTGGGAAGGTCCTCCATCCACACCTGCAGAAAACAGCCAAGGCCTGTAAGGAAGTTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGCCCCATTAGCCGGGCTGGGGGCCATGCACCACAGCAGGAAGCCACACTTCAGTACGTCAGCCACTaGGTGTCATCATCTTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSPISRAGGHAPQQEATLQYVSH*VSSSLL Trigger: CAACAAAGATGATGACACCCAGTGGCTGACGTACTG...AAGTGTGGCTTCCTGCTGTGGTGCATGGCCCCCAGCCCGGCTAATGGGGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| 3UTR CAA 90 bp | CAGCCACTGCTGGACCGACAACAGCTGTTAGCCACTGCCCTTCACTaGCCCAGAATGGCTCTTAGAGCTGGACGTCATCAGCGCAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: QPLLDRQQLLATALH*PRMALRAGRHQRNV Trigger: CACATTGCGCTGATGACGTCCAGCTCTAAGAGCCATTCTGGGCAAGTGAAGGGCAGTGGCTAACAGCTGTTGTCGGTCCAGCAGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTTCCAGGTTCAGGCAGCCAGGGGAGTCTGGGAACGTGTAAGGAGGCACTGAGCGCAATGTGCTGCTaGCAGGAACAAGAACACACA | + |
|
Preference number: 2 (lower is better) Translates to: TLPGSGSQGSLGTCKEALSAMCC*QEQEHT Trigger: TGTGTGTTCTTGTTCCTGTCAGCAGCACATTGCGCT...CAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGGAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTTCCAGGTTCAGGCAGCCAGGGGAGTCTGGGAACGTGTAAGGAGGCACTGCATGATTTCTCCCATTaGCAGCTGCAGAAAGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TLPGSGSQGSLGTCKEALHDFSH*QLQKVA Trigger: TGCTACTTTCTGCAGCTGTCAATGGGAGAAATCATG...CAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGGAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 90 bp | TGGGAAACTGGAGCTGATCACGGGTTCGAGTCTTACTCGCTTGCATaGATTTCTGAAACGTTATTGGAAGCTCAGACCTCCAGCCTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: WETGADHGFESYSLA*ISETLLEAQTSSLG Trigger: GCCGAGGCTGGAGGTCTGAGCTTCCAATAACGTTTCAGAAATCAATGCAAGCGAGTAAGACTCGAACCCGTGATCAGCTCCAGTTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTTCCAGGTTCAGGCAGCCAGGGGAGTCTGGGAACGTGTAAGGAGGCACTGGCATATGGTGCAAACTaGAGATTTTTAGACCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TLPGSGSQGSLGTCKEALAYGAN*RFLDPN Trigger: GTTTGGGTCTAAAAATCTGCAGTTTGCACCATATGC...CAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGGAAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 90 bp | CCCCGCAGAGCACGGGGCCTACAGACAGAGATTCCCAACCCTCTTTaGTATTTCCTGGAGTATAGTGACATGTCTTCCTACACAGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PRRARGLQTEIPNPL*YFLEYSDMSSYTAK Trigger: TTTTGCTGTGTAGGAAGACATGTCACTATACTCCAGGAAATACAAAAGAGGGTTGGGAATCTCTGTCTGTAGGCCCCGTGCTCTGCGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTTAGACCCAAACTCTTTTGTATTTCCTaGAGTATAGTGACATGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LKGWDAGIWCKLQIFRPKLFCIS*SIVTCL Trigger: AAGACATGTCACTATACTCCAGGAAATACAAAAGAG...TTTGGGTCTAAAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR TCA 90 bp | ACACTCTGCTCCTATATGCTACACTGTAATTTTCATTCTGCCAACAAGAAAAACTATCCCCAGGAAAACTaGCACAGTGACCCATATTAC | + |
|
Preference number: 2 (lower is better) Translates to: TLCSYMLHCNFHSANKKNYPQEN*HSDPYY Trigger: GTAATATGGGTCACTGTGTCAGTTTTCCTGGGGATA...GTTTTTCTTGTTGGCAGAATGAAAATTACAGTGTAGCATATAGGAGCAGAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCAGGAAATAATTGCTGCACGAACTCTTTGGGACATTTAATGTTTAGCAAGGCAGAAGTCGATTCATaGTTTCTCCCATTGACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: MSGNNCCTNSLGHLMFSKAEVDS*FLPLTA Trigger: AGCTGTCAATGGGAGAAATCATGAATCGACTTCTGC...CTTGCTAAACATTAAATGTCCCAAAGAGTTCGTGCAGCAATTATTTCCTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 90 bp | GAGGACCTTCCCACAATGTCAGGAAATAATTGCTGCACGAACTCTTaGGGACATTTAATGTTTAGCAAGAATTCTAGAACTTTATATGCC | + |
|
Preference number: 2 (lower is better) Translates to: EDLPTMSGNNCCTNS*GHLMFSKNSRTLYA Trigger: GGCATATAAAGTTCTAGAATTCTTGCTAAACATTAAATGTCCCAAAGAGTTCGTGCAGCAATTATTTCCTGACATTGTGGGAAGGTCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | AGCCTCGGCAGGTGGTCTCCCTTCTCAGGTCACAGGTaGCGTCTACAAGCCTCTCCTGGCCTCTTCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SLGRWSPFSGHR*RLQASPGLFLT Trigger: TGTGAGGAAGAGGCCAGGAGAGGCTTGTAGACGCCACCTGTGACCTGAGAAGGGAGACCACCTGCCGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | GCCAGCCGTGGGGCACAAGCTACAATGAGCAGCAGCTaGGATTTGGAGGTTATCCTGGGCTACGTGGGATCG | + |
|
Preference number: 3 (lower is better) Translates to: ASRGAQATMSSS*DLEVILGYVGS Trigger: CGATCCCACGTAGCCCAGGATAACCTCCAAATCCCAGCTGCTGCTCATTGTAGCTTGTGCCCCACGGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | ACGTTATTGGAAGCTCAGACCTCCAGCCTCGGCAGGTaGTCTCCCTTCTCAGGTCACAGGTGGCGTCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLLEAQTSSLGR*SPFSGHRWRLQ Trigger: TTGTAGACGCCACCTGTGACCTGAGAAGGGAGACCACCTGCCGAGGCTGGAGGTCTGAGCTTCCAATAACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR TCA 72 bp | TTTCCTAACTGTAAGCACAAGGAGACGCATGCAGAGTaGGCCCCGCAGAGCACGGGGCCTACAGACAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FPNCKHKETHAE*APQSTGPTDRD Trigger: ATCTCTGTCTGTAGGCCCCGTGCTCTGCGGGGCTCACTCTGCATGCGTCTCCTTGTGCTTACAGTTAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | TCAGTACTCTTCCAGGTTCAGGCAGCCAGGGGAGTCTaGGAACGTGTAAGGAGGCACTGGGCACATCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SVLFQVQAARGV*ERVRRHWAHHF Trigger: GAAATGATGTGCCCAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGGAAGAGTACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR TCA 72 bp | CTCTTAGAGCTGGACGTCATCAGCGCAATGTGCTGCTaGCAGGAACAAGAACACACACGTATGCCAGCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLELDVISAMCC*QEQEHTRMPAV Trigger: CACGGCTGGCATACGTGTGTGTTCTTGTTCCTGTCAGCAGCACATTGCGCTGATGACGTCCAGCTCTAAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR GCA 72 bp | CAATGTGCTGCTGACAGGAACAAGAACACACACGTATaGCAGCCGTGGGGCACAAGCTACAATGAGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QCAADRNKNTHV*QPWGTSYNEQQ Trigger: CTGCTGCTCATTGTAGCTTGTGCCCCACGGCTGGCATACGTGTGTGTTCTTGTTCCTGTCAGCAGCACATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | GCTGACAGGAACAAGAACACACACGTATGCCAGCCGTaGGGCACAAGCTACAATGAGCAGCAGCTGGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: ADRNKNTHVCQP*GTSYNEQQLGF Trigger: AAATCCCAGCTGCTGCTCATTGTAGCTTGTGCCCCACGGCTGGCATACGTGTGTGTTCTTGTTCCTGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | GCTTTGTCCTTCACGTCCTTCACCACACTGTCTACCTaGGACTCGTGCTTGAGGAAGATAGGACGGATGATT | + |
|
Preference number: 3 (lower is better) Translates to: ALSFTSFTTLST*DSCLRKIGRMI Trigger: AATCATCCGTCCTATCTTCCTCAAGCACGAGTCCCAGGTAGACAGTGTGGTGAAGGACGTGAAGGACAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGCAGTCTCTTTGGCTTTGTCCTTCACGTCCTTCACCACACTGTCTACCTGTGGGTGTCATCATCTTaGTTGGGACTCTCGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ICSLFGFVLHVLHHTVYLWVSSS*LGLSMA Trigger: AGCCATCGAGAGTCCCAACAAAGATGATGACACCCA...CAGGTAGACAGTGTGGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| 3UTR TCA 72 bp | ACCAGTAGGCAGAAGTCGATTCATGATTTCTCCCATTaGCAGCTGCAGAAAGTAGCAGGGAGTCTCCCGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TSRQKSIHDFSH*QLQKVAGSLPQ Trigger: TTGCGGGAGACTCCCTGCTACTTTCTGCAGCTGTCAATGGGAGAAATCATGAATCGACTTCTGCCTACTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | AGGACCTTGTTAGCCAGCTTTCAGGTAAACCATAAATaGCTGGCATTTCAGCATCTCAGAGGAGGAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RTLLASFQVNHK*LAFQHLRGGAG Trigger: CCCTGCTCCTCCTCTGAGATGCTGAAATGCCAGCCATTTATGGTTTACCTGAAAGCTGGCTAACAAGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CCA 72 bp | TCCTTACAGGCCTTGGCTGTTTTCTGCAGGTGTGGATaGAGGACCTTCCCACAATGTCAGGAAATAATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLQALAVFCRCG*RTFPQCQEIIA Trigger: AGCAATTATTTCCTGACATTGTGGGAAGGTCCTCCATCCACACCTGCAGAAAACAGCCAAGGCCTGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR TCA 72 bp | GAGCTGATCACGGGTTCGAGTCTTACTCGCTTGCATTaGTTTCTGAAACGTTATTGGAAGCTCAGACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ELITGSSLTRLH*FLKRYWKLRPP Trigger: TGGAGGTCTGAGCTTCCAATAACGTTTCAGAAATCAATGCAAGCGAGTAAGACTCGAACCCGTGATCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGACTAACTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTATTCCCAACCCTCTTTaGTATTTCCTGGAGTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: FRLTQRLGRWHMVQTADFIPNPL*YFLEYS Trigger: ACTATACTCCAGGAAATACAAAAGAGGGTTGGGAAT...AAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAGTTAGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR GCA 72 bp | CCACCAATACAATCTCTAACCGTAAGCATCATTCCCTaGCTGCCCATTCCCCACAGAAAGTATTTTGTATAT | + |
|
Preference number: 3 (lower is better) Translates to: PPIQSLTVSIIP*LPIPHRKYFVY Trigger: ATATACAAAATACTTTCTGTGGGGAATGGGCAGGCAGGGAATGATGCTTACGGTTAGAGATTGTATTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR GCA 72 bp | ATGGAGGACCTTCCCACAATGTCAGGAAATAATTGCTaGACGAACTCTTTGGGACATTTAATGTTTAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MEDLPTMSGNNC*TNSLGHLMFSK Trigger: CTTGCTAAACATTAAATGTCCCAAAGAGTTCGTGCAGCAATTATTTCCTGACATTGTGGGAAGGTCCTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTCAGGCAGCCAGGGGAGTCTGGGAACGTGTAAGGAGGCACTGGGCACAGGTTCACTCCGGTCTTaGCCTCGAGCTTGGCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSGSQGSLGTCKEALGTGSLRS*PRAWRG Trigger: TCCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACC...TGTGCCCAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGTTCAGGCAGCCAGGGGAGTCTGGGAACGTGTAAGGAGGCACTGGGCACATCTACCTGGGACTCGTaGTTGAGGAAGATAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSGSQGSLGTCKEALGTSTWDS*LRKIGR Trigger: CCGTCCTATCTTCCTCAAGCACGAGTCCCAGGTAGA...TGTGCCCAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGCTCAGACCTCCAGCCTCGGCAGGTGGTCTCCCTTCTCAGGTCACAGCAGTACGTCAGCCACTaGGTGTCATCATCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGSSDLQPRQVVSLLRSQQYVSH*VSSSLL Trigger: CAACAAAGATGATGACACCCAGTGGCTGACGTACTG...CTGTGACCTGAGAAGGGAGACCACCTGCCGAGGCTGGAGGTCTGAGCTTCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACATTATCCAACGACTGTGCCACTGTCCCTAGCATGACACAGAGCTCCATGCAGTTCTTCTCGTaGAGGAACCGGTCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KATLSNDCATVPSMTQSSMQFFS*RNRSNL Trigger: GAGGTTCGACCGGTTCCTGCACGAGAAGAACTGCAT...GGAGCTCTGTGTCATGCTAGGGACAGTGGCACAGTCGTTGGATAATGTTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR GCA 90 bp | TACCTGGGACTCGTGCTTGAGGAAGATAGGACGGATGATTCGCCTGTAGAGCATCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLGLVLEEDRTDDSPVEHRNLSG*RGERLH Trigger: ATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCG...ATGCTCTACAGGCGAATCATCCGTCCTATCTTCCTCAAGCACGAGTCCCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACATTATCCAACGACTGTGCCACTGTCCCTAGCATGACACAGAGCTCCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KATLSNDCATVPSMTQSSRNLSG*RGERLH Trigger: ATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCG...GGAGCTCTGTGTCATGCTAGGGACAGTGGCACAGTCGTTGGATAATGTTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTTAGACCCAAATCTTGGCCTCGAGCTTaGCGAGGAGATCAGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGWDAGIWCKLQIFRPKSWPRA*RGDQSC Trigger: GCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGA...TTTGGGTCTAAAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGCAACATTATCCAACGACTGTGCCACTGTCCCTAGCATGACACAGAGCCATCTGCAGTCTCTTTaGCTTTGTCCTTCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKATLSNDCATVPSMTQSHLQSL*LCPSRP Trigger: AGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATG...GCTCTGTGTCATGCTAGGGACAGTGGCACAGTCGTTGGATAATGTTGCCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| 3UTR CAA 72 bp | GAGTCTTACTCGCTTGCATTGATTTCTGAAACGTTATaGGAAGCTCAGACCTCCAGCCTCGGCAGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESYSLALISETL*EAQTSSLGRWS Trigger: AGACCACCTGCCGAGGCTGGAGGTCTGAGCTTCCAATAACGTTTCAGAAATCAATGCAAGCGAGTAAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR GCA 90 bp | GAAGTTTCCAAGGCAACATTATCCAACGACTGTGCCACTGTCCCTAGCATGACACGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVSKATLSNDCATVPSMTRNLSG*RGERLH Trigger: ATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCG...TGTCATGCTAGGGACAGTGGCACAGTCGTTGGATAATGTTGCCTTGGAAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTAACTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTACCACACTGTCTACCTaGGACTCGTGCTTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRLTQRLGRWHMVQTADFTTLST*DSCLRK Trigger: CTTCCTCAAGCACGAGTCCCAGGTAGACAGTGTGGT...AAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAGTTAGTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 72 bp | GCACGGGGCCTACAGACAGAGATTCCCAACCCTCTTTaGTATTTCCTGGAGTATAGTGACATGTCTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARGLQTEIPNPL*YFLEYSDMSSY Trigger: GTAGGAAGACATGTCACTATACTCCAGGAAATACAAAAGAGGGTTGGGAATCTCTGTCTGTAGGCCCCGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 72 bp | GGAGCTGATCACGGGTTCGAGTCTTACTCGCTTGCATaGATTTCTGAAACGTTATTGGAAGCTCAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GADHGFESYSLA*ISETLLEAQTS Trigger: GGAGGTCTGAGCTTCCAATAACGTTTCAGAAATCAATGCAAGCGAGTAAGACTCGAACCCGTGATCAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTAACTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTCGAGGAGATCAGTCATaGAGTTCTTCTCGTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRLTQRLGRWHMVQTADFRGDQS*SSSRAG Trigger: TCCTGCACGAGAAGAACTGCATGACTGATCTCCTCG...AAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAGTTAGTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTAACTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTTGTTGGGACTCTCGATaGCTTTCATTGAGATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRLTQRLGRWHMVQTADFCWDSR*LSLRCR Trigger: CCTACATCTCAATGAAAGCCATCGAGAGTCCCAACA...AAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAGTTAGTCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR GCA 90 bp | CAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACTCTACCTGGGACTCGTaGTTGAGGAAGATAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: QHIPFLIQREVSKATLSNSTWDS*LRKIGR Trigger: CCGTCCTATCTTCCTCAAGCACGAGTCCCAGGTAGA...GTTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| 3UTR CAA 72 bp | CCGCAAAGTTGTGGGGTTGATGCAGCAAAATTACTTTaGGAGTTTATTTCACTGCAGCGTTTCCACCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: PQSCGVDAAKLL*EFISLQRFHQY Trigger: GTATTGGTGGAAACGCTGCAGTGAAATAAACTCCAAAAGTAATTTTGCTGCATCAACCCCACAACTTTGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CCA 90 bp | CAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACCACAGAGATGTAGGCTaGGTATCCGAAACCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHIPFLIQREVSKATLSNHRDVG*VSETYQ Trigger: CTGATAGGTTTCGGATACCCAGCCTACATCTCTGTG...GTTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236887.2 |
||
| CDS-3UTR GCA 90 bp | CAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACTTTGCTGATGGCATCTaGAGTCTCTTTGGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHIPFLIQREVSKATLSNFADGI*SLFGFV Trigger: GACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAA...GTTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACAAGCACTGTGCATGTTCTAGCCAAACAATAACATTTTCCATATATATGCATCTGCAGTCTCTTTaGCTTTGTCCTTCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHKHCACSSQTITFSIYMHLQSL*LCPSRP Trigger: AGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATG...CATATATATGGAAAATGTTATTGTTTGGCTAGAACATGCACAGTGCTTGTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 72 bp | CCCACAATGTCAGGAAATAATTGCTGCACGAACTCTTaGGGACATTTAATGTTTAGCAAGAATTCTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PTMSGNNCCTNS*GHLMFSKNSRT Trigger: AGTTCTAGAATTCTTGCTAAACATTAAATGTCCCAAAGAGTTCGTGCAGCAATTATTTCCTGACATTGTGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| 3UTR CAA 72 bp | CTTAGTCATCTGGAGGAGAATTACTATCTATTTGTCTaGAAAGTAACTCCTGTTGTTAACTTTGGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLEENYYLFV*KVTPVVNFGRQ Trigger: TTGTCTACCAAAGTTAACAACAGGAGTTACTTTCAAGACAAATAGATAGTAATTCTCCTCCAGATGACTAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS GCA 90 bp | GGTTCACTCCGGTCTTGGCCTCGAGCTTGGCGAGGAGATCAGTCATaGAGTTCTTCTCGTGCAGGAACCGGTCGAACCTCTCCCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSWPRAWRGDQS*SSSRAGTGRTSPSW Trigger: CCATGAGGGAGAGGTTCGACCGGTTCCTGCACGAGAAGAACTGCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | ATTGGAAGCTCAGACCTCCAGCCTCGGCAGGTGGTCTCCCTTCTCAGGTCACAGGTCTTGGCCTCGAGCTaGGCGAGGAGATCAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: IGSSDLQPRQVVSLLRSQVLASS*ARRSVM Trigger: CATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGAC...CTGTGACCTGAGAAGGGAGACCACCTGCCGAGGCTGGAGGTCTGAGCTTCCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | ACTTCCTTACAGGCCTTGGCTGTTTTCTGCAGGTGTGGATGGAGGACCTTCCCACGGTTCACTCCGGTCTaGGCCTCGAGCTTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSLQALAVFCRCGWRTFPRFTPV*ASSLAR Trigger: CCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACCG...TGGGAAGGTCCTCCATCCACACCTGCAGAAAACAGCCAAGGCCTGTAAGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | CCAGGTTCAGGCAGCCAGGGGAGTCTGGGAACGTGTAAGGAGGCACTGGGCACAGCAGTCTCTTTGGCTTaGTCCTTCACGTCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PGSGSQGSLGTCKEALGTAVSLA*SFTSFT Trigger: GGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGC...TGTGCCCAGTGCCTCCTTACACGTTCCCAGACTCCCCTGGCTGCCTGAACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | ACTTCCTTACAGGCCTTGGCTGTTTTCTGCAGGTGTGGATGGAGGACCTTCCCACCGAAACCTATCAGGTaGCAGAGGAGAGAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLQALAVFCRCGWRTFPPKPIR*QRREAP Trigger: TGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGG...TGGGAAGGTCCTCCATCCACACCTGCAGAAAACAGCCAAGGCCTGTAAGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | AAGGCAACATTATCCAACGACTGTGCCACTGTCCCTAGCATGACACAGAGCTCCGCATCTGCAGTCTCTTaGGCTTTGTCCTTCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KATLSNDCATVPSMTQSSASAVS*ALSFTS Trigger: GGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGC...GGAGCTCTGTGTCATGCTAGGGACAGTGGCACAGTCGTTGGATAATGTTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CAA 90 bp | ATTGGAAGCTCAGACCTCCAGCCTCGGCAGGTGGTCTCCCTTCTCAGGTCACAGTTCACTGTAGCTTTCTaGACTTCTTTGCTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IGSSDLQPRQVVSLLRSQFTVAF*TSLLMA Trigger: TGCCATCAGCAAAGAAGTCAAGAAAGCTACAGTGAA...CTGTGACCTGAGAAGGGAGACCACCTGCCGAGGCTGGAGGTCTGAGCTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS GCA 90 bp | AGGAAGCCACAGAGATGTAGGCTGGGTATCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCATAACCGAACACCAGATACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKPQRCRLGIRNLSG*RGERLHNRTPDTKP Trigger: TGGCTTTGTATCTGGTGTTCGGTTATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCTGTGGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236887.2 |
||
| CDS-3UTR CAA 90 bp | CAGGACAGGAAGAGATCGGAGAAGAATTCGGCAATGCTGAACACACCATATACCCCGAAACCTATCAGGTaGCAGAGGAGAGAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QDRKRSEKNSAMLNTPYTPKPIR*QRREAP Trigger: TGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGG...GGTATATGGTGTGTTCAGCATTGCCGAATTCTTCTCCGATCTCTTCCTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| CDS GCA 90 bp | TGGCTTTCATTGAGATGTAGGCTGGGTATCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCATAACCGAACACCAGATACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WLSLRCRLGIRNLSG*RGERLHNRTPDTKP Trigger: TGGCTTTGTATCTGGTGTTCGGTTATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCAATGAAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000235153.2 |
||
| CDS GCA 90 bp | CAGCAAGTTCACTGTAGCTTTCTTGACTTCTTTGCTGATGGCATCTaGAGTCTCTTTGGCTTTGTCCTTCACGTCCTTCACCACACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQVHCSFLDFFADGI*SLFGFVLHVLHHTV Trigger: GACAGTGTGGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGCTACAGTGAACTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS GCA 90 bp | GATAATGATGTGAGATGTAGGCTGGGTATCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCATAACCGAACACCAGATACAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DNDVRCRLGIRNLSG*RGERLHNRTPDTKP Trigger: TGGCTTTGTATCTGGTGTTCGGTTATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCACATCATTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTAACCGTAAGCATCATTCCCTGCCTGCCCATTCCCCACAGAAAGTATTTTGGGTGTCATCATCTTaGTTGGGACTCTCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISNRKHHSLPAHSPQKVFWVSSS*LGLSMA Trigger: AGCCATCGAGAGTCCCAACAAAGATGATGACACCCA...AAATACTTTCTGTGGGGAATGGGCAGGCAGGGAATGATGCTTACGGTTAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | CTCAAAGGCTGGGACGCTGGCATATGGTGCAAACTGCAGATTTTTAGACCCAAAGCTTTCTTGACTTCTTaGCTGATGGCATCTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKGWDAGIWCKLQIFRPKAFLTS*LMASAV Trigger: GACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGC...TTTGGGTCTAAAAATCTGCAGTTTGCACCATATGCCAGCGTCCCAGCCTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | ACAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACCGAAACCTATCAGGTaGCAGAGGAGAGAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTHSIFNTAGSFQGNIIQPKPIR*QRREAP Trigger: TGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGG...TTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CAA 90 bp | CAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACGCAGTCTCTTTGGCTTaGTCCTTCACGTCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QHIPFLIQREVSKATLSNAVSLA*SFTSFT Trigger: GGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGC...GTTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGAATGCTAATAATTATGAATTGTAAAGTAAGGAGACCTCTTGAGGTTGGCGCATCTGCAGTCTCTTaGGCTTTGTCCTTCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGMLIIMNCKVRRPLEVGASAVS*ALSFTS Trigger: GGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGC...GCCAACCTCAAGAGGTCTCCTTACTTTACAATTCATAATTATTAGCATTCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS-3UTR CAA 90 bp | CAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACGCTTTCTTGACTTCTTaGCTGATGGCATCTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHIPFLIQREVSKATLSNAFLTS*LMASAV Trigger: GACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGC...GTTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS-3UTR CAA 90 bp | CAACACATTCCATTTTTAATACAGCGGGAAGTTTCCAAGGCAACATTATCCAACTTCACTGTAGCTTTCTaGACTTCTTTGCTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHIPFLIQREVSKATLSNFTVAF*TSLLMA Trigger: TGCCATCAGCAAAGAAGTCAAGAAAGCTACAGTGAA...GTTGGATAATGTTGCCTTGGAAACTTCCCGCTGTATTAAAAATGGAATGTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS CAA 90 bp | CCGAGCGCGATGAAGCTCCGGTTCACTCCGGTCTTGGCCTCGAGCTaGGCGAGGAGATCAGTCATGCAGTTCTTCTCGTGCAGGAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: PSAMKLRFTPVLASS*ARRSVMQFFSCRNR Trigger: CCGGTTCCTGCACGAGAAGAACTGCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACCGGAGCTTCATCGCGCTCGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS CAA 72 bp | ACACCGAGCGCGATGAAGCTCCGGTTCACTCCGGTCTaGGCCTCGAGCTTGGCGAGGAGATCAGTCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSAMKLRFTPV*ASSLARRSVMQ Trigger: CTGCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACCGGAGCTTCATCGCGCTCGGTGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS CAA 90 bp | AGTCCGATGACACCGAGCGCGATGAAGCTCCGGTTCACTCCGGTCTaGGCCTCGAGCTTGGCGAGGAGATCAGTCATGCAGTTCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPMTPSAMKLRFTPV*ASSLARRSVMQFFS Trigger: CGAGAAGAACTGCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACCGGAGCTTCATCGCGCTCGGTGTCATCGGACT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS GCA 72 bp | AGCTTGGCGAGGAGATCAGTCATGCAGTTCTTCTCGTaGAGGAACCGGTCGAACCTCTCCCTCATGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLARRSVMQFFS*RNRSNLSLMAA Trigger: CGCAGCCATGAGGGAGAGGTTCGACCGGTTCCTGCACGAGAAGAACTGCATGACTGATCTCCTCGCCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS GCA 72 bp | CGGTCTTGGCCTCGAGCTTGGCGAGGAGATCAGTCATaGAGTTCTTCTCGTGCAGGAACCGGTCGAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSWPRAWRGDQS*SSSRAGTGRTS Trigger: AGAGGTTCGACCGGTTCCTGCACGAGAAGAACTGCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGACCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS CAA 72 bp | ATGAAGCTCCGGTTCACTCCGGTCTTGGCCTCGAGCTaGGCGAGGAGATCAGTCATGCAGTTCTTCTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MKLRFTPVLASS*ARRSVMQFFSC Trigger: GCACGAGAAGAACTGCATGACTGATCTCCTCGCCAAGCTCGAGGCCAAGACCGGAGTGAACCGGAGCTTCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006027.7 |
||
| CDS CCA 72 bp | CCATGCACCACAGCAGGAAGCCACAGAGATGTAGGCTaGGTATCCGAAACCTATCAGGTTGCAGAGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PCTTAGSHRDVG*VSETYQVAEER Trigger: TCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCTGTGGCTTCCTGCTGTGGTGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236887.2 |
||
| CDS CAA 90 bp | GCTTTCTTGACTTCTTTGCTGATGGCATCTGCAGTCTCTTTGGCTTaGTCCTTCACGTCCTTCACCACACTGTCTACCTGGGACTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AFLTSLLMASAVSLA*SFTSFTTLSTWDSC Trigger: GCACGAGTCCCAGGTAGACAGTGTGGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS GCA 72 bp | CAGAGATGTAGGCTGGGTATCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCATAACCGAACACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QRCRLGIRNLSG*RGERLHNRTPD Trigger: ATCTGGTGTTCGGTTATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236887.2 |
||
| CDS GCA 72 bp | GTGAGATGTAGGCTGGGTATCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCATAACCGAACACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VRCRLGIRNLSG*RGERLHNRTPD Trigger: ATCTGGTGTTCGGTTATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235227.2 |
||
| CDS CCA 72 bp | CCCAGTACGTCAGCCACTGGGTGTCATCATCTTTGTTaGGACTCTCGATGGCTTTCATTGAGATGTAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSTSATGCHHLC*DSRWLSLRCRL Trigger: CAGCCTACATCTCAATGAAAGCCATCGAGAGTCCCAACAAAGATGATGACACCCAGTGGCTGACGTACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000235153.2 |
||
| CDS GCA 72 bp | TTGAGATGTAGGCTGGGTATCCGAAACCTATCAGGTTaGAGAGGAGAGAGGCTCCATAACCGAACACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRCRLGIRNLSG*RGERLHNRTPD Trigger: ATCTGGTGTTCGGTTATGGAGCCTCTCTCCTCTGCAACCTGATAGGTTTCGGATACCCAGCCTACATCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000235153.2 |
||
| CDS CAA 72 bp | ACTTCTTTGCTGATGGCATCTGCAGTCTCTTTGGCTTaGTCCTTCACGTCCTTCACCACACTGTCTACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSLLMASAVSLA*SFTSFTTLSTW Trigger: CCAGGTAGACAGTGTGGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS CAA 90 bp | ACTGTAGCTTTCTTGACTTCTTTGCTGATGGCATCTGCAGTCTCTTaGGCTTTGTCCTTCACGTCCTTCACCACACTGTCTACCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TVAFLTSLLMASAVS*ALSFTSFTTLSTWD Trigger: GTCCCAGGTAGACAGTGTGGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGCTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS CAA 90 bp | TCCATAACCGAACACCAGATACAAAGCCACCAGTCCGATGACACCTaGAGATCTAAGAGAAGGGAAGTGTTTCCTAGCAGCTACCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SITEHQIQSHQSDDT*RSKRREVFPSSYQR Trigger: TCGCTGGTAGCTGCTAGGAAACACTTCCCTTCTCTTAGATCTCAAGGTGTCATCGGACTGGTGGCTTTGTATCTGGTGTTCGGTTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235153.2 |
||
| CDS CAA 72 bp | TCGCCCAGCAAGTTCACTGTAGCTTTCTTGACTTCTTaGCTGATGGCATCTGCAGTCTCTTTGGCTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSKFTVAFLTS*LMASAVSLALS Trigger: GGACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGCTACAGTGAACTTGCTGGGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS CAA 72 bp | GAACACCAGATACAAAGCCACCAGTCCGATGACACCTaGAGATCTAAGAGAAGGGAAGTGTTTCCTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EHQIQSHQSDDT*RSKRREVFPSS Trigger: GCTGCTAGGAAACACTTCCCTTCTCTTAGATCTCAAGGTGTCATCGGACTGGTGGCTTTGTATCTGGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235153.2 |
||
| CDS CAA 72 bp | TTCTTGACTTCTTTGCTGATGGCATCTGCAGTCTCTTaGGCTTTGTCCTTCACGTCCTTCACCACACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLTSLLMASAVS*ALSFTSFTTLS Trigger: AGACAGTGTGGTGAAGGACGTGAAGGACAAAGCCAAAGAGACTGCAGATGCCATCAGCAAAGAAGTCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||
| CDS CAA 72 bp | TTCTTCTCATCGCCCAGCAAGTTCACTGTAGCTTTCTaGACTTCTTTGCTGATGGCATCTGCAGTCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFSSPSKFTVAF*TSLLMASAVSL Trigger: CAAAGAGACTGCAGATGCCATCAGCAAAGAAGTCAAGAAAGCTACAGTGAACTTGCTGGGCGATGAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006027.7 ENSMUST00000236887.2 |
||