Pregenerated sensors for REEP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019873Ensembl transcript IDs: ENSMUST00000020023.9, ENSMUST00000217841.2, ENSMUST00000218920.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTACAGCAGGGACAAGCCCGAGCAGGGACCAGGACCGGGAGGGTaGACGGCAGTGAGCAGGTCAGCCAACTTTAGCTCCGAGTCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: VYSRDKPEQGPGPGG*TAVSRSANFSSESG Trigger: GCCTGACTCGGAGCTAAAGTTGGCTGACCTGCTCACTGCCGTTCACCCTCCCGGTCCTGGTCCCTGCTCGGGCTTGTCCCTGCTGTAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 90 bp | GGGACAAGCCCGAGCAGGGACCAGGACCGGGAGGGTGAACGGCAGTaGGCAGGTCAGCCAACTTTAGCTCCGAGTCAGGCGGTATCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: GTSPSRDQDREGERQ*AGQPTLAPSQAVSL Trigger: CAAAGATACCGCCTGACTCGGAGCTAAAGTTGGCTGACCTGCTCACTGCCGTTCACCCTCCCGGTCCTGGTCCCTGCTCGGGCTTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 90 bp | CAGCGTCTAAGGCTTAAGGAAGGACACAGCCCCCTCCTATGGCAATaGCACTGGCTCCTCAGGGGCTGTCACCACTCTCCTGTGATAGAT | + |
|
Preference number: 1 (lower is better) Translates to: QRLRLKEGHSPLLWQ*HWLLRGCHHSPVID Trigger: ATCTATCACAGGAGAGTGGTGACAGCCCCTGAGGAGCCAGTGTCATTGCCATAGGAGGGGGCTGTGTCCTTCCTTAAGCCTTAGACGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 90 bp | TTCAGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATaGTGGGACACACCTCTAATGGCAGCATCTGGGAGGCAGCGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: FRLARVRLSLKTTWA*WDTPLMAASGRQRQ Trigger: CTGCCGCTGCCTCCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 90 bp | GCTGGATTGCAGACAGTTGTGAGCTGCCACGTGGGTGATGGGATTTaGACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: AGLQTVVSCHVGDGI*TQDLWKSSQCSLPL Trigger: CAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGTGGCAGCTCACAACTGTCTGCAATCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 90 bp | ATCACTTGGAGCTGGATTGCAGACAGTTGTGAGCTGCCACGTGGGTaGTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: ITWSWIADSCELPRG*WDLNSGPLEEQPVL Trigger: GAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGTGGCAGCTCACAACTGTCTGCAATCCAGCTCCAAGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 90 bp | GGCAGAGAGAAACAGTGCCTTAAACCGGTTTGTGCATTCGCGTGCTaGTGCTCCAGTTGGCAGTGTGGGTTAAGTCAAGGCACTGTGGTC | + |
|
Preference number: 1 (lower is better) Translates to: GREKQCLKPVCAFAC*CSSWQCGLSQGTVV Trigger: GACCACAGTGCCTTGACTTAACCCACACTGCCAACTGGAGCACCAGCACGCGAATGCACAAACCGGTTTAAGGCACTGTTTCTCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 90 bp | GCTACATCAATGCCCCCTGCGTCTCCCACGTGTAGGCAGGGATGTTaGGCATGCTCAGCAGAATCCTTGAAGGTCCTTCATGTATTTGTG | + |
|
Preference number: 1 (lower is better) Translates to: ATSMPPASPTCRQGC*ACSAESLKVLHVFV Trigger: CACAAATACATGAAGGACCTTCAAGGATTCTGCTGAGCATGCTCAACATCCCTGCCTACACGTGGGAGACGCAGGGGGCATTGATGTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR GCA 90 bp | ATGACACTGGCTCCTCAGGGGCTGTCACCACTCTCCTGTGATAGATaGAGGCAAGATGATGTAAACAGAATGCAACACCAGAACGGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: MTLAPQGLSPLSCDR*RQDDVNRMQHQNGR Trigger: CCTGCCGTTCTGGTGTTGCATTCTGTTTACATCATCTTGCCTGCATCTATCACAGGAGAGTGGTGACAGCCCCTGAGGAGCCAGTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR GCA 90 bp | AAAGGCAGAGAGAAACAGTGCCTTAAACCGGTTTGTGCATTCGCGTaGTGGTGCTCCAGTTGGCAGTGTGGGTTAAGTCAAGGCACTGTG | + |
|
Preference number: 1 (lower is better) Translates to: KGREKQCLKPVCAFA*WCSSWQCGLSQGTV Trigger: CACAGTGCCTTGACTTAACCCACACTGCCAACTGGAGCACCAGCACGCGAATGCACAAACCGGTTTAAGGCACTGTTTCTCTCTGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CCA 90 bp | AGGCAGCATAGGCCTCTGCCGAGCTCAGGAGCTGAGTGTGGGCATTaGGAAGTCCATGAGTTAGAAAACACTAAGTGCTACATTGGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: RQHRPLPSSGAECGH*EVHELENTKCYIGL Trigger: CAGACCAATGTAGCACTTAGTGTTTTCTAACTCATGGACTTCCCAATGCCCACACTCAGCTCCTGAGCTCGGCAGAGGCCTATGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR GCA 90 bp | AGAGAGAAACAGTGCCTTAAACCGGTTTGTGCATTCGCGTGCTGGTaGTCCAGTTGGCAGTGTGGGTTAAGTCAAGGCACTGTGGTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: REKQCLKPVCAFACW*SSWQCGLSQGTVVY Trigger: ATAGACCACAGTGCCTTGACTTAACCCACACTGCCAACTGGAGCACCAGCACGCGAATGCACAAACCGGTTTAAGGCACTGTTTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR GCA 90 bp | AAGGTCCTTCATGTATTTGTGCTTCGCTCAGCCAAAATAAACTTGTaGACCGACCTTGTGAACAGATGCCTGGTAATGAGGCCACGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: KVLHVFVLRSAKINL*TDLVNRCLVMRPRD Trigger: GTCCCGTGGCCTCATTACCAGGCATCTGTTCACAAGGTCGGTGCACAAGTTTATTTTGGCTGAGCGAAGCACAAATACATGAAGGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR TCA 90 bp | CTCTATCTAATGTGCATTGGTGTTTTGCCTGTACGCATATCTGTGTaGGGGTGTCAAATCACTTGGAGCTGGATTGCAGACAGTTGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: LYLMCIGVLPVRISV*GCQITWSWIADSCE Trigger: CTCACAACTGTCTGCAATCCAGCTCCAAGTGATTTGACACCCTCACACAGATATGCGTACAGGCAAAACACCAATGCACATTAGATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 90 bp | GATAACTTCTCAGATGTCCGGAATATAACTGAAGGGCATTTAAAATaGGCCAAGTGTGATAACGTCTGTTATCCCAGCAATGGCGAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: DNFSDVRNITEGHLK*AKCDNVCYPSNGEV Trigger: CACTTCGCCATTGCTGGGATAACAGACGTTATCACACTTGGCTCATTTTAAATGCCCTTCAGTTATATTCCGGACATCTGAGAAGTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 90 bp | GAAGTCTTTGGTGGTGACACATGGAATAAGATCCCTGAAAACACATaGGGAGTTAGTTCTGTCCCAGACCTCTATGTGCTAAAGTGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: EVFGGDTWNKIPENT*GVSSVPDLYVLKCL Trigger: TAAACACTTTAGCACATAGAGGTCTGGGACAGAACTAACTCCTCATGTGTTTTCAGGGATCTTATTCCATGTGTCACCACCAAAGACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 90 bp | CACAAACAGAAAGTCATTAAAACAGATAGCAAGAGGTCAGGGATTTaGCGCCACTGGCAGTGGTTTAAAAAGCCAATTAGACTTCAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: HKQKVIKTDSKRSGI*RHWQWFKKPIRLQQ Trigger: TTGCTGAAGTCTAATTGGCTTTTTAAACCACTGCCAGTGGCGTCAAATCCCTGACCTCTTGCTATCTGTTTTAATGACTTTCTGTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR CCA 90 bp | TTCTGTGTAGAAAATATTCGTAGTATCAAGAGGTCATTGTGTGTGTaGGCCATTCAGGCACCCCCATGTAAGCATTGTTTGATATTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: FCVENIRSIKRSLCV*AIQAPPCKHCLILK Trigger: TTTCAATATCAAACAATGCTTACATGGGGGTGCCTGAATGGCCCACACACACAATGACCTCTTGATACTACGAATATTTTCTACACAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 90 bp | ATCAGGTTAGAAAATGAAGTTGATCTGTTAGCGGTTTATTCATCTTaGGAAGGGCAAGGTGTAGACACTAAAAATACACTTGCGGTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: IRLENEVDLLAVYSS*EGQGVDTKNTLAVS Trigger: AGAGACCGCAAGTGTATTTTTAGTGTCTACACCTTGCCCTTCCCAAGATGAATAAACCGCTAACAGATCAACTTCATTTTCTAACCTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| 3UTR CCA 90 bp | CTATCTATCTATCTATCTATCTATCTATCTCTATCTAATGTGCATTaGTGTTTTGCCTGTACGCATATCTGTGTGAGGGTGTCAAATCAC | + |
|
Preference number: 1 (lower is better) Translates to: LSIYLSIYLSLSNVH*CFACTHICVRVSNH Trigger: GTGATTTGACACCCTCACACAGATATGCGTACAGGCAAAACACCAATGCACATTAGATAGAGATAGATAGATAGATAGATAGATAGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 90 bp | TGGGAAGTCCATGAGTTAGAAAACACTAAGTGCTACATTGGTCTGTaGCGCTTCCACAAAATCAATCTATCTATCTATCTATCTATCTAT | + |
|
Preference number: 1 (lower is better) Translates to: WEVHELENTKCYIGL*RFHKINLSIYLSIY Trigger: ATAGATAGATAGATAGATAGATAGATTGATTTTGTGGAAGCGTCACAGACCAATGTAGCACTTAGTGTTTTCTAACTCATGGACTTCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGCCACCTCTCCAGCCCCTCCTATGGCAATaGCACTGGCTCCTCAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SGPLEEQPVLFTSEPPLQPLLWQ*HWLLRG Trigger: GCCCCTGAGGAGCCAGTGTCATTGCCATAGGAGGGG...CTGGAGAGGTGGCTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCATCTGGGAGGCAGCGGCAGGTGGAGCTTTGTGAGTTTGAGGCCAGCCTGGTGGGTGATGGGATTTaGACTCAGGACCTCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AASGRQRQVELCEFEASLVGDGI*TQDLWK Trigger: CTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCAC...CAGGCTGGCCTCAAACTCACAAAGCTCCACCTGCCGCTGCCTCCCAGATGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGAGTGCTCTTTACCTCTaGGCCACCTCTCCAGCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: WDLNSGPLEEQPVLFTSESALYL*ATSPAP Trigger: GGGGGCTGGAGAGGTGGCTCAGAGGTAAAGAGCACT...CTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGGCCGAGCTCAGGAGCTaGGTGTGGGCATTGGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGAELRS*VWALGS Trigger: ACTTCCCAATGCCCACACTCAGCTCCTGAGCTCGGC...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR GCA 90 bp | CACCAAACTGTTCTGTGGACGGTAGGAAAAGAGGCTGAATCCTGCCACACCCCCAGGGGCCAACACTTCTaGTCTTCACCTGCCCTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: HQTVLWTVGKEAESCHTPRGQHF*SSPALD Trigger: ATCAAGGGCAGGTGAAGAGCAGAAGTGTTGGCCCCT...GGGGGTGTGGCAGGATTCAGCCTCTTTTCCTACCGTCCACAGAACAGTTTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATGGTGGGACACAGGAGGCAGCGGCAGGTaGAGCTTTGTGAGTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLARVRLSLKTTWAWWDTGGSGR*SFVSLR Trigger: CCTCAAACTCACAAAGCTCCACCTGCCGCTGCCTCC...TGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGACTCAGTGTTGCTGCTaGCATCAGGGACGCGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: WDLNSGPLEEQPVLFTSETQCCC*HQGRDS Trigger: AGAATCGCGTCCCTGATGTCAGCAGCAACACTGAGT...CTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCAAACTGTTCTGTGGACGGTAGGAAAAGAGGCTGAATCCTGCCACACCCCCCTGCAGAAAAGAGGGTaGGGCTTGATGGCTGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HQTVLWTVGKEAESCHTPLQKRG*GLMAEK Trigger: TTTTTCAGCCATCAAGCCTCACCCTCTTTTCTGCAG...GGGGGTGTGGCAGGATTCAGCCTCTTTTCCTACCGTCCACAGAACAGTTTGGTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGTGGAAGAGCAGCCAGTaGTCTTTACCTCTGAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: WDLNSGPLEEQPVLFTSEWKSSQ*SLPLSH Trigger: GTGGCTCAGAGGTAAAGAGCACTGGCTGCTCTTCCA...CTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGTGGGTGATGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTGCGGTTTATTCATCTTaGGAAGGGCAAGGTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TWVMGFELRTSGRAASALAVYSS*EGQGVD Trigger: GTCTACACCTTGCCCTTCCCAAGATGAATAAACCGC...AAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCAAACTGTTCTGTGGACGGTAGGAAAAGAGGCTGAATCCTGCCACACCCCCTCCTGGTTTCATTCTTaGCATGCTCAGGTGATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: HQTVLWTVGKEAESCHTPSWFHS*HAQVIQ Trigger: TTGAATCACCTGAGCATGCCAAGAATGAAACCAGGA...GGGGGTGTGGCAGGATTCAGCCTCTTTTCCTACCGTCCACAGAACAGTTTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR CAA 90 bp | TTGAAGGTCCTTCATGTATTTGTGCTTCGCTCAGCCAAAATAAACTaGTGCACCGACCTTGTGAACAGATGCCTGGTAATGAGGCCACGG | + |
|
Preference number: 2 (lower is better) Translates to: LKVLHVFVLRSAKIN*CTDLVNRCLVMRPR Trigger: CCGTGGCCTCATTACCAGGCATCTGTTCACAAGGTCGGTGCACAAGTTTATTTTGGCTGAGCGAAGCACAAATACATGAAGGACCTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGCTCTCCTGTGATAGATaGAGGCAAGATGATGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGLSCDR*RQDDVN Trigger: GTTTACATCATCTTGCCTGCATCTATCACAGGAGAG...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGCCACCTCTCCAGAACAATTTTCAAGTGTaGAAAACTAGCCAGGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGPLEEQPVLFTSEPPLQNNFQV*KTSQES Trigger: ACTTTCCTGGCTAGTTTTGCACACTTGAAAATTGTT...CTGGAGAGGTGGCTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGCAGGAAAGTGCTATGTaGACACCTGGTTTTCAAATC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGQESAM*TPGFQI Trigger: GATTTGAAAACCAGGTGTCCACATAGCACTTTCCTG...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGGTGTCTATAATGGGCTaGATGGATTTACCAAACGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGVSIMG*MDLPNE Trigger: TTCGTTTGGTAAATCCATTCAGCCCATTATAGACAC...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGTGTCCGGAATATAACTaGAGGGCATTTAAAATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGCPEYN*RAFKMS Trigger: GCTCATTTTAAATGCCCTTCAGTTATATTCCGGACA...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGGTTTGTGTTTTACCCTaGCACTCATTTTCAGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGVCVLP*HSFSEN Trigger: ATTCTCTGAAAATGAGTGTCAGGGTAAAACACAAAC...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACCACTCTCCTGTGATAGATGCAGGCAAGATGATGTAAACAGAATGCAACACGCGGTTTATTCATCTTaGGAAGGGCAAGGTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SPLSCDRCRQDDVNRMQHAVYSS*EGQGVD Trigger: GTCTACACCTTGCCCTTCCCAAGATGAATAAACCGC...GTGTTGCATTCTGTTTACATCATCTTGCCTGCATCTATCACAGGAGAGTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTAAGAGAAACAGAACAAAACAGCGCTTTAGCTCAGCATACAGAGTTCAAAGAGCTGCCACGTGGGTaGTGGGATTTGAACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLRETEQNSALAQHTEFKELPRG*WDLNSG Trigger: TCCTGAGTTCAAATCCCATCACCCACGTGGCAGCTC...TTTGAACTCTGTATGCTGAGCTAAAGCGCTGTTTTGTTCTGTTTCTCTTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGAACAATTTTCAAGTGTaGAAAACTAGCCAGGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLKTTWAWWDTPLMAASGNNFQV*KTSQES Trigger: ACTTTCCTGGCTAGTTTTGCACACTTGAAAATTGTT...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR TCA 90 bp | AACACAGACCATTTAAAGTCATTGCGTAAATCCCATCCCTGCCACACTCTGAAGATCCCTGCCACACTCTaGAGATTTAAAGTGTTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: NTDHLKSLRKSHPCHTLKIPATL*RFKVLS Trigger: GCTTAACACTTTAAATCTTCAGAGTGTGGCAGGGAT...CTTCAGAGTGTGGCAGGGATGGGATTTACGCAATGACTTTAAATGGTCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGGAGACAAAGTAACTTACTGTACTTATCACATCACCTTATCAGGTAACACGATCCCTGCCACACTCTaGAGATTTAAAGTGTTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HGDKVTYCTYHITLSGNTIPATL*RFKVLS Trigger: GCTTAACACTTTAAATCTTCAGAGTGTGGCAGGGAT...CGTGTTACCTGATAAGGTGATGTGATAAGTACAGTAAGTTACTTTGTCTCCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTAAGAGAAACAGAACAAAACAGCGCTTTAGCTCAGCATACAGAGTTCAAAGTTGTTGACTCTAGCTaGATATGTATCAAAAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: SLRETEQNSALAQHTEFKVVDSS*ICIKRW Trigger: CCATCTTTTGATACATATGCAGCTAGAGTCAACAAC...TTTGAACTCTGTATGCTGAGCTAAAGCGCTGTTTTGTTCTGTTTCTCTTAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 72 bp | AGGGACAAGCCCGAGCAGGGACCAGGACCGGGAGGGTaGACGGCAGTGAGCAGGTCAGCCAACTTTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RDKPEQGPGPGG*TAVSRSANFSS Trigger: GGAGCTAAAGTTGGCTGACCTGCTCACTGCCGTTCACCCTCCCGGTCCTGGTCCCTGCTCGGGCTTGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGACACTGGCTCCTCAGGGGCTGTCACCACTCTCCTGTGATAGATGCAGGCCTAGGCACTCAGTGTaGCTGCTGACATCAGGGACG | + |
|
Preference number: 3 (lower is better) Translates to: AMTLAPQGLSPLSCDRCRPRHSV*LLTSGT Trigger: CGTCCCTGATGTCAGCAGCAACACTGAGTGCCTAGG...CCTGCATCTATCACAGGAGAGTGGTGACAGCCCCTGAGGAGCCAGTGTCATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 72 bp | AGGCTTAAGGAAGGACACAGCCCCCTCCTATGGCAATaGCACTGGCTCCTCAGGGGCTGTCACCACTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLKEGHSPLLWQ*HWLLRGCHHSP Trigger: AGGAGAGTGGTGACAGCCCCTGAGGAGCCAGTGTCATTGCCATAGGAGGGGGCTGTGTCCTTCCTTAAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 72 bp | CAGACAGTTGTGAGCTGCCACGTGGGTGATGGGATTTaGACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QTVVSCHVGDGI*TQDLWKSSQCS Trigger: AGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGTGGCAGCTCACAACTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 72 bp | ATGCCCCCTGCGTCTCCCACGTGTAGGCAGGGATGTTaGGCATGCTCAGCAGAATCCTTGAAGGTCCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: MPPASPTCRQGC*ACSAESLKVLH Trigger: ATGAAGGACCTTCAAGGATTCTGCTGAGCATGCTCAACATCCCTGCCTACACGTGGGAGACGCAGGGGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR TCA 72 bp | GCCTGGGCTACACAGTGCATTTCAGGCTGGCTAGAGTaGGGCTTAGTCTCAAAACAACTTGGGCATGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AWATQCISGWLE*GLVSKQLGHGG Trigger: CCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCTGAAATGCACTGTGTAGCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CCA 72 bp | AGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATGGTaGGACACACCTCTAATGGCAGCATCTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVRLSLKTTWAW*DTPLMAASGRQ Trigger: CTGCCTCCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CCA 72 bp | GCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATaGTGGGACACACCTCTAATGGCAGCATCTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARVRLSLKTTWA*WDTPLMAASGR Trigger: CCTCCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR GCA 72 bp | GCTCCTCAGGGGCTGTCACCACTCTCCTGTGATAGATaGAGGCAAGATGATGTAAACAGAATGCAACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: APQGLSPLSCDR*RQDDVNRMQHQ Trigger: CTGGTGTTGCATTCTGTTTACATCATCTTGCCTGCATCTATCACAGGAGAGTGGTGACAGCCCCTGAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 72 bp | AGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTaGGCATGGTGGGACACACCTCTAATGGCAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RLARVRLSLKTT*AWWDTPLMAAS Trigger: AGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CCA 72 bp | CGTGAGAAAGAATGTTCACATGCACGTAGGTGCCCTTaGAAATCAGAGGAAGGTATTGTACCCCCAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: REKECSHARRCP*KSEEGIVPPGA Trigger: AGCTCCTGGGGGTACAATACCTTCCTCTGATTTCCAAGGGCACCTACGTGCATGTGAACATTCTTTCTCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAGGTATTGTACCCCCAGGAGCTGGCACTGCAGGCTGCAGTGAACTAAACGAATATGATACAATCTaGCCAATTTGTCCCCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EEGIVPPGAGTAGCSELNEYDTI*PICPHG Trigger: TCCATGGGGACAAATTGGCAAGATTGTATCATATTC...GTTTAGTTCACTGCAGCCTGCAGTGCCAGCTCCTGGGGGTACAATACCTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCAATTTGTCCCCATGGAGACAAAGTAACTTACTGTACTTATCACATCACCCCTAGGCACTCAGTGTaGCTGCTGACATCAGGGACG | + |
|
Preference number: 3 (lower is better) Translates to: LPICPHGDKVTYCTYHITPRHSV*LLTSGT Trigger: CGTCCCTGATGTCAGCAGCAACACTGAGTGCCTAGG...GGTGATGTGATAAGTACAGTAAGTTACTTTGTCTCCATGGGGACAAATTGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CAA 90 bp | AATAAACTTGTGCACCGACCTTGTGAACAGATGCCTGGTAATGAGGCCACGGGATTCCTGGTTTCATTCTaGGCATGCTCAGGTGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: NKLVHRPCEQMPGNEATGFLVSF*ACSGDS Trigger: TGAATCACCTGAGCATGCCAAGAATGAAACCAGGAA...TCCCGTGGCCTCATTACCAGGCATCTGTTCACAAGGTCGGTGCACAAGTTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR TCA 72 bp | ATGTGCATTGGTGTTTTGCCTGTACGCATATCTGTGTaGGGGTGTCAAATCACTTGGAGCTGGATTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MCIGVLPVRISV*GCQITWSWIAD Trigger: GTCTGCAATCCAGCTCCAAGTGATTTGACACCCTCACACAGATATGCGTACAGGCAAAACACCAATGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR TCA 72 bp | CTAGAAAACACACACAGTGTGTGTGGAGGGGACCTATaGGGAACTGAGGTGGCCGTAGACAATTGTTTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LENTHSVCGGDL*GTEVAVDNCLC Trigger: ACATAAACAATTGTCTACGGCCACCTCAGTTCCTCATAGGTCCCCTCCACACACACTGTGTGTGTTTTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR GCA 72 bp | TGTATCCGTGAGAAAGAATGTTCACATGCACGTAGGTaGCCTTGGAAATCAGAGGAAGGTATTGTACCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CIREKECSHARR*PWKSEEGIVPP Trigger: TGGGGGTACAATACCTTCCTCTGATTTCCAAGGGCACCTACGTGCATGTGAACATTCTTTCTCACGGATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CCA 72 bp | CCACCCATGCCGCACAGCATTGGTTCAGAGCAGGTCTaGTTCATGAGAAATGAATACATCCTGTCCAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: PPMPHSIGSEQV*FMRNEYILSNN Trigger: ATTATTGGACAGGATGTATTCATTTCTCATGAACCAGACCTGCTCTGAACCAATGCTGTGCGGCATGGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR GCA 72 bp | ATTTTTGGATACATGTCAAAAGGCAGAGAGAAACAGTaGCTTAAACCGGTTTGTGCATTCGCGTGCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IFGYMSKGREKQ*LKPVCAFACWC Trigger: GCACCAGCACGCGAATGCACAAACCGGTTTAAGGCACTGTTTCTCTCTGCCTTTTGACATGTATCCAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR GCA 72 bp | CATGTATTTGTGCTTCGCTCAGCCAAAATAAACTTGTaGACCGACCTTGTGAACAGATGCCTGGTAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVFVLRSAKINL*TDLVNRCLVMR Trigger: CCTCATTACCAGGCATCTGTTCACAAGGTCGGTGCACAAGTTTATTTTGGCTGAGCGAAGCACAAATACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR CCA 72 bp | AATGTTGTTGACTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: NVVDSSCICIKR*PSRPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAACAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CCA 72 bp | GAAAATATTCGTAGTATCAAGAGGTCATTGTGTGTGTaGGCCATTCAGGCACCCCCATGTAAGCATTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ENIRSIKRSLCV*AIQAPPCKHCL Trigger: CAAACAATGCTTACATGGGGGTGCCTGAATGGCCCACACACACAATGACCTCTTGATACTACGAATATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 72 bp | TGCAGAGCTCTAATTTACATACATAAAAACCGGGGTTaGTCTCTTAGAGAGGTGTACCGAGAAGAGCGAATC | + |
|
Preference number: 3 (lower is better) Translates to: CRALIYIHKNRG*SLREVYREERI Trigger: GATTCGCTCTTCTCGGTACACCTCTCTAAGAGACCAACCCCGGTTTTTATGTATGTAAATTAGAGCTCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTAAGAGAAACAGAACAAAACAGCGCTTTAGCTCAGCATACAGAGTTCAAATCACTTGGAGCTGGATaGCAGACAGTTGTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLRETEQNSALAQHTEFKSLGAG*QTVVSC Trigger: GCAGCTCACAACTGTCTGCAATCCAGCTCCAAGTGA...TTTGAACTCTGTATGCTGAGCTAAAGCGCTGTTTTGTTCTGTTTCTCTTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 72 bp | CTAGAACGTGATATTTCTCCCAATTTAAAACGCCTGTaGAGTAGGGTATGGAGCCACACACCTGTAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LERDISPNLKRL*SRVWSHTPVIS Trigger: TGAGATTACAGGTGTGTGGCTCCATACCCTACTTCACAGGCGTTTTAAATTGGGAGAAATATCACGTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTCTAATTTACATACATAAAAACCGGGGTTGGTCTCTTAGAGAGGTGTACTCAGCCAAAATAAACTaGTGCACCGACCTTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RALIYIHKNRGWSLREVYSAKIN*CTDLVN Trigger: GTTCACAAGGTCGGTGCACAAGTTTATTTTGGCTGA...GTACACCTCTCTAAGAGACCAACCCCGGTTTTTATGTATGTAAATTAGAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| 3UTR TCA 72 bp | TGCCGCACAGCATTGGTTCAGAGCAGGTCTGGTTCATaGGAAATGAATACATCCTGTCCAATAATTTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRTALVQSRSGS*EMNTSCPIIYC Trigger: ACAATAAATTATTGGACAGGATGTATTCATTTCTCATGAACCAGACCTGCTCTGAACCAATGCTGTGCGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTAAGAGAAACAGAACAAAACAGCGCTTTAGCTCAGCATACAGAGTTCAAAATTGAACTCAAGGCCTaGTGTACCTCAAGCATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLRETEQNSALAQHTEFKIELKA*CTSSMV Trigger: CACCATGCTTGAGGTACACAAGGCCTTGAGTTCAAT...TTTGAACTCTGTATGCTGAGCTAAAGCGCTGTTTTGTTCTGTTTCTCTTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACATCAGGGACGCGATTCTCGGTCACTTTTGTTATCTACACGTACATTTACACACTAAAAATACACTaGCGGTCTCTTCTTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTSGTRFSVTFVIYTYIYTLKIH*RSLLHF Trigger: AAAGTGAAGAAGAGACCGCAAGTGTATTTTTAGTGT...GTAAATGTACGTGTAGATAACAAAAGTGACCGAGAATCGCGTCCCTGATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| 3UTR TCA 72 bp | TCAGATGTCCGGAATATAACTGAAGGGCATTTAAAATaGGCCAAGTGTGATAACGTCTGTTATCCCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SDVRNITEGHLK*AKCDNVCYPSN Trigger: ATTGCTGGGATAACAGACGTTATCACACTTGGCTCATTTTAAATGCCCTTCAGTTATATTCCGGACATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 72 bp | GTATGCATTCTTAAAACAGAGCCATCTCTCCAGCTATaGCTCTTCTTAATACCAGAAAGGAAAAAGAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VCILKTEPSLQL*LFLIPERKKKD Trigger: GTCTTTCTTTTTCCTTTCTGGTATTAAGAAGAGCCATAGCTGGAGAGATGGCTCTGTTTTAAGAATGCATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR TCA 72 bp | CATGAGTTAGAAAACACTAAGTGCTACATTGGTCTGTaGCGCTTCCACAAAATCAATCTATCTATCTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: HELENTKCYIGL*RFHKINLSIYL Trigger: TAGATAGATAGATAGATTGATTTTGTGGAAGCGTCACAGACCAATGTAGCACTTAGTGTTTTCTAACTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CCA 72 bp | GTTGAGAAAAACCACATCAAATTCAATGATGGAAACTaGTTAATGTTTAAGATAACTTCTCAGATGTCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VEKNHIKFNDGN*LMFKITSQMSG Trigger: TCCGGACATCTGAGAAGTTATCTTAAACATTAACCAGTTTCCATCATTGAATTTGATGTGGTTTTTCTCAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CAA 72 bp | ATGCACGTAGGTGCCCTTGGAAATCAGAGGAAGGTATaGTACCCCCAGGAGCTGGCACTGCAGGCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MHVGALGNQRKV*YPQELALQAAV Trigger: CACTGCAGCCTGCAGTGCCAGCTCCTGGGGGTACAATACCTTCCTCTGATTTCCAAGGGCACCTACGTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATGGTGGGACACATCTTCACTGCTGCAGTaGCGGCGGCTGCAGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLARVRLSLKTTWAWWDTSSLLQ*RRLQLL Trigger: TAGCAGCTGCAGCCGCCGTCACTGCAGCAGTGAAGA...TGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR TCA 90 bp | TGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGTCTTCACTGCTGCAGTaGCGGCGGCTGCAGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WDLNSGPLEEQPVLFTSESSLLQ*RRLQLL Trigger: TAGCAGCTGCAGCCGCCGTCACTGCAGCAGTGAAGA...CTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR GCA 90 bp | GCAATGACACTGGCTCCTCAGGGGCTGTCACCACTCTCCTGTGATAGATGCAGGGTACAGGGGAAACCATaGAAGTGTCTGATCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AMTLAPQGLSPLSCDRCRVQGKP*KCLIGH Trigger: GTGGCCGATCAGACACTTGCATGGTTTCCCCTGTAC...CCTGCATCTATCACAGGAGAGTGGTGACAGCCCCTGAGGAGCCAGTGTCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGGTATTGTACCCCCAGGAGCTGGCACTGCAGGCTGCAGTGAACTAAACAGGCTGGTGACTCGGTaGCTTGTTTGCCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEGIVPPGAGTAGCSELNRLVTR*LVCLSS Trigger: AGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCT...GTTTAGTTCACTGCAGCCTGCAGTGCCAGCTCCTGGGGGTACAATACCTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR GCA 90 bp | ACGTGGGTGATGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTGTACAGGGGAAACCATaGAAGTGTCTGATCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TWVMGFELRTSGRAASALVQGKP*KCLIGH Trigger: GTGGCCGATCAGACACTTGCATGGTTTCCCCTGTAC...AAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CAA 72 bp | TATCTGTGTGAGGGTGTCAAATCACTTGGAGCTGGATaGCAGACAGTTGTGAGCTGCCACGTGGGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLCEGVKSLGAG*QTVVSCHVGDG Trigger: CCCATCACCCACGTGGCAGCTCACAACTGTCTGCAATCCAGCTCCAAGTGATTTGACACCCTCACACAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCAAAACAACTTGGGCATGGTGGGACACACCTCTAATGGCAGCATCTGGGTCAGATCATGCATGCTaGAACTTCGCAGACGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTTWAWWDTPLMAASGSDHAC*NFADAP Trigger: CGGAGCGTCTGCGAAGTTTCAGCATGCATGATCTGA...CCCAGATGCTGCCATTAGAGGTGTGTCCCACCATGCCCAAGTTGTTTTGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR GCA 90 bp | ACGTGGGTGATGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTCGTTCTTGCATAGCCTaGATGGGGTCCTTGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TWVMGFELRTSGRAASALRSCIA*MGSLFN Trigger: ATTGAACAAGGACCCCATGCAGGCTATGCAAGAACG...AAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATGGTGGGACACATTTCCTCTTTGCTTCTaGCAAAGTCTGGTAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLARVRLSLKTTWAWWDTFPLCF*QSLVGS Trigger: AGACCCTACCAGACTTTGCCAGAAGCAAAGAGGAAA...TGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGTTTCCTCTTTGCTTCTaGCAAAGTCTGGTAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WDLNSGPLEEQPVLFTSEFPLCF*QSLVGS Trigger: AGACCCTACCAGACTTTGCCAGAAGCAAAGAGGAAA...CTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR GCA 90 bp | CATGGAGACAAAGTAACTTACTGTACTTATCACATCACCTTATCAGGTAACACGTCCTTGGCTCTTCACTaGTGCAGTGACGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGDKVTYCTYHITLSGNTSLALH*CSDGGC Trigger: GCAGCCGCCGTCACTGCAGCAGTGAAGAGCCAAGGA...CGTGTTACCTGATAAGGTGATGTGATAAGTACAGTAAGTTACTTTGTCTCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR TCA 90 bp | AACAATTTTCAAGTGTGCAAAACTAGCCAGGAAAGTGCTATGTGGACACCTGGTCGGCCACCGTTTCAATaGCAGTGTAGAGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNFQVCKTSQESAMWTPGRPPFQ*QCRGQR Trigger: TCTTTGCCCTCTACACTGTCATTGAAACGGTGGCCG...ACCAGGTGTCCACATAGCACTTTCCTGGCTAGTTTTGCACACTTGAAAATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR TCA 90 bp | AACAATTTTCAAGTGTGCAAAACTAGCCAGGAAAGTGCTATGTGGACACCTGGTAATTCCATAGGCTGGTaGCTCGGTGGCTTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NNFQVCKTSQESAMWTPGNSIGW*LGGLFA Trigger: GGCAAACAAGCCACCGAGTCACCAGCCTATGGAATT...ACCAGGTGTCCACATAGCACTTTCCTGGCTAGTTTTGCACACTTGAAAATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTTTAAAAAGCCAATTAGACTTCAGCAATTTTACTGCAGAGCTCTAATTCCTTCACTGCTGCAGTaGCGGCGGCTGCAGCTGCTN | + |
|
Preference number: 4 (lower is better) Translates to: QWFKKPIRLQQFYCRALIPSLLQ*RRLQLL Trigger: NAGCAGCTGCAGCCGCCGTCACTGCAGCAGTGAAGG...AATTAGAGCTCTGCAGTAAAATTGCTGAAGTCTAATTGGCTTTTTAAACCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| CDS-3UTR GCA 90 bp | TATCTATCTATCTATCTATCTCTATCTAATGTGCATTGGTGTTTTGCCTGTACGTCCTTGGCTCTTCACTaGTGCAGTGACGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLSIYLSLSNVHWCFACTSLALH*CSDGGC Trigger: GCAGCCGCCGTCACTGCAGCAGTGAAGAGCCAAGGA...CGTACAGGCAAAACACCAATGCACATTAGATAGAGATAGATAGATAGATAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGACCATTTAAAGTCATTGCGTAAATCCCATCCCTGCCACACTCTGAAGACTCGGTGGCTTGTTTaGCTTTCCTCTTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTDHLKSLRKSHPCHTLKTRWLV*LSSLLL Trigger: CAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGT...CTTCAGAGTGTGGCAGGGATGGGATTTACGCAATGACTTTAAATGGTCTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR TCA 90 bp | GACGCGATTCTCGGTCACTTTTGTTATCTACACGTACATTTACAAACCTTACATCGGCCACCGTTTCAATaGCAGTGTAGAGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DAILGHFCYLHVHLQTLHRPPFQ*QCRGQR Trigger: TCTTTGCCCTCTACACTGTCATTGAAACGGTGGCCG...ATGTAAGGTTTGTAAATGTACGTGTAGATAACAAAAGTGACCGAGAATCGCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| 3UTR CAA 72 bp | CTTGTGTTCAGATTTCTGTATTTAGATCTTCATTCGTaGTCTCCCCCGCCCCTCCAATGGCAGACAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LVFRFLYLDLHS*SPPPLQWQTIF Trigger: GAATATTGTCTGCCATTGGAGGGGCGGGGGAGACAACGAATGAAGATCTAAATACAGAAATCTGAACACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| 3UTR CAA 72 bp | CTTCATGTATTTGTGCTTCGCTCAGCCAAAATAAACTaGTGCACCGACCTTGTGAACAGATGCCTGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LHVFVLRSAKIN*CTDLVNRCLVM Trigger: CATTACCAGGCATCTGTTCACAAGGTCGGTGCACAAGTTTATTTTGGCTGAGCGAAGCACAAATACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218920.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCAATTTGTCCCCATGGAGACAAAGTAACTTACTGTACTTATCACATCACCACTCGGTGGCTTGTTTaGCTTTCCTCTTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPICPHGDKVTYCTYHITTRWLV*LSSLLL Trigger: CAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGT...GGTGATGTGATAAGTACAGTAAGTTACTTTGTCTCCATGGGGACAAATTGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR GCA 90 bp | AACAATTTTCAAGTGTGCAAAACTAGCCAGGAAAGTGCTATGTGGACACCTGGTGCTTCTTCGTCTGTCTaGTCACTTCCATCTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNFQVCKTSQESAMWTPGASSSV*SLPSFS Trigger: ACTGAAAGATGGAAGTGAGCAGACAGACGAAGAAGC...ACCAGGTGTCCACATAGCACTTTCCTGGCTAGTTTTGCACACTTGAAAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGACCATTTAAAGTCATTGCGTAAATCCCATCCCTGCCACACTCTGAAGGTAGGAATAGTACGCTaGATAGAGCATTCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NTDHLKSLRKSHPCHTLKVGIVR*IEHSKH Trigger: GTGTTTGGAATGCTCTATCCAGCGTACTATTCCTAC...CTTCAGAGTGTGGCAGGGATGGGATTTACGCAATGACTTTAAATGGTCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCAGGGACGCGATTCTCGGTCACTTTTGTTATCTACACGTACATTTACGTAGGAATAGTACGCTaGATAGAGCATTCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LTSGTRFSVTFVIYTYIYVGIVR*IEHSKH Trigger: GTGTTTGGAATGCTCTATCCAGCGTACTATTCCTAC...GTAAATGTACGTGTAGATAACAAAAGTGACCGAGAATCGCGTCCCTGATGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTAAGAGAAACAGAACAAAACAGCGCTTTAGCTCAGCATACAGAGTTCAAATTTGCCTTTCCTCTTTaGTTCTGGCAAAGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLRETEQNSALAQHTEFKFAFPL*FWQSLV Trigger: TACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAA...TTTGAACTCTGTATGCTGAGCTAAAGCGCTGTTTTGTTCTGTTTCTCTTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR GCA 90 bp | TATCTATCTATCTATCTATCTCTATCTAATGTGCATTGGTGTTTTGCCTGTACGGCTTCTTCGTCTGTCTaGTCACTTCCATCTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLSIYLSLSNVHWCFACTASSSV*SLPSFS Trigger: ACTGAAAGATGGAAGTGAGCAGACAGACGAAGAAGC...CGTACAGGCAAAACACCAATGCACATTAGATAGAGATAGATAGATAGATAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CCA 90 bp | GGATCGCCTCAGCGCCTTGTGAGTCACCATCTCGTCATCGGAGAATaGCCCCTCCGCTTCTTCGTCTGTCTGCTCACTTCCATCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPQRLVSHHLVIGE*PLRFFVCLLTSIFQ Trigger: CTGAAAGATGGAAGTGAGCAGACAGACGAAGAAGCGGAGGGGCCATTCTCCGATGACGAGATGGTGACTCACAAGGCGCTGAGGCGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS TCA 90 bp | ATGGTCTTGACAGATTTCATGCTCTGGGATCGCCTCAGCGCCTTGTaGGTCACCATCTCGTCATCGGAGAATGGCCCCTCCGCTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: MVLTDFMLWDRLSAL*VTISSSENGPSASS Trigger: CGAAGAAGCGGAGGGGCCATTCTCCGATGACGAGATGGTGACTCACAAGGCGCTGAGGCGATCCCAGAGCATGAAATCTGTCAAGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS GCA 90 bp | GGTCTGTGTCCCACGGGCTCATCCCCTTGGATAGCTGTCAGATCATaGATGCTGAAACTTCGCAGACGCTCCGTTATTGCTCCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLCPTGSSPWIAVRS*MLKLRRRSVIAPWL Trigger: GAGCCAAGGAGCAATAACGGAGCGTCTGCGAAGTTTCAGCATGCATGATCTGACAGCTATCCAAGGGGATGAGCCCGTGGGACACAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGCCACCTCTCCAGGACTCGGTGGCTTGTTaGCCTTTCCTCTTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGPLEEQPVLFTSEPPLQDSVAC*PFLFAS Trigger: AGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTC...CTGGAGAGGTGGCTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATGGTGGGACACAGCAGACGCTCCGTTATaGCTCCTTGGCTCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLARVRLSLKTTWAWWDTADAPL*LLGSSL Trigger: CAGTGAAGAGCCAAGGAGCAATAACGGAGCGTCTGC...TGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR CAA 90 bp | TGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGCACGGGCTCATCCCCTaGGATAGCTGTCAGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: WDLNSGPLEEQPVLFTSEHGLIP*DSCQIM Trigger: CATGATCTGACAGCTATCCAAGGGGATGAGCCCGTG...CTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | GCAATGACACTGGCTCCTCAGGGGCTGTCACCACTCTCCTGTGATAGATGCAGGACCTCTTTGCGGCCTTaGATGGTCTTGACAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AMTLAPQGLSPLSCDRCRTSLRP*MVLTDF Trigger: GAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGT...CCTGCATCTATCACAGGAGAGTGGTGACAGCCCCTGAGGAGCCAGTGTCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR CAA 90 bp | ACGTGGGTGATGGGATTTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTGACTCGGTGGCTTGTTaGCCTTTCCTCTTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TWVMGFELRTSGRAASALDSVAC*PFLFAS Trigger: AGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTC...AAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCATCACCCACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGTATTGTACCCCCAGGAGCTGGCACTGCAGGCTGCAGTGAACTAAACCAATTTCCCTTTCCTTaGATGACAGCAGGGGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEGIVPPGAGTAGCSELNQFPFP*MTAGDE Trigger: TTCATCCCCTGCTGTCATCAAAGGAAAGGGAAATTG...GTTTAGTTCACTGCAGCCTGCAGTGCCAGCTCCTGGGGGTACAATACCTTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS GCA 90 bp | CATCTTTCAGTGGAATTCCATAGGCTGGTGACTCGGTGGCTTGTTTaGCTTTCCTCTTTGCTTCTGGCAAAGTCTGGTAGGGTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLSVEFHRLVTRWLV*LSSLLLAKSGRVCV Trigger: GACACAGACCCTACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCTATGGAATTCCACTGAAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CCA 90 bp | GCTCACTTCCATCTTTCAGTGGAATTCCATAGGCTGGTGACTCGGTaGCTTGTTTGCCTTTCCTCTTTGCTTCTGGCAAAGTCTGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHFHLSVEFHRLVTR*LVCLSSLLLAKSGR Trigger: CCTACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCTATGGAATTCCACTGAAAGATGGAAGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS TCA 90 bp | GTCTGTCTGCTCACTTCCATCTTTCAGTGGAATTCCATAGGCTGGTaGCTCGGTGGCTTGTTTGCCTTTCCTCTTTGCTTCTGGCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VCLLTSIFQWNSIGW*LGGLFAFPLCFWQS Trigger: ACTTTGCCAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCTATGGAATTCCACTGAAAGATGGAAGTGAGCAGACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTTACCTCTGAGCCACCTCTCCAGGCCTCTTTCTTTGGCTaGGACAATATAATCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGPLEEQPVLFTSEPPLQASFFG*DNIIIN Trigger: ATTGATGATTATATTGTCCAAGCCAAAGAAAGAGGC...CTGGAGAGGTGGCTCAGAGGTAAAGAGCACTGGCTGCTCTTCCAGAGGTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTGTCACCACTCTCCTGTGATAGATGCAGGCAAGATGATGTAAACAGAATGCAATTTCCCTTTCCTTaGATGACAGCAGGGGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLSPLSCDRCRQDDVNRMQFPFP*MTAGDE Trigger: TTCATCCCCTGCTGTCATCAAAGGAAAGGGAAATTG...CATTCTGTTTACATCATCTTGCCTGCATCTATCACAGGAGAGTGGTGACAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGCTAGAGTGAGGCTTAGTCTCAAAACAACTTGGGCATGGTGGGACACAGCCTCTTTCTTTGGCTaGGACAATATAATCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLARVRLSLKTTWAWWDTASFFG*DNIIIN Trigger: ATTGATGATTATATTGTCCAAGCCAAAGAAAGAGGC...TGTGTCCCACCATGCCCAAGTTGTTTTGAGACTAAGCCTCACTCTAGCCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR CAA 90 bp | CATGGAGACAAAGTAACTTACTGTACTTATCACATCACCTTATCAGGTAACACGCACGGGCTCATCCCCTaGGATAGCTGTCAGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: HGDKVTYCTYHITLSGNTHGLIP*DSCQIM Trigger: CATGATCTGACAGCTATCCAAGGGGATGAGCCCGTG...CGTGTTACCTGATAAGGTGATGTGATAAGTACAGTAAGTTACTTTGTCTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR CAA 90 bp | AACAATTTTCAAGTGTGCAAAACTAGCCAGGAAAGTGCTATGTGGACACCTGGTTCCTCTTTGCGGCCTTaGATGGTCTTGACAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NNFQVCKTSQESAMWTPGSSLRP*MVLTDF Trigger: GAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGA...ACCAGGTGTCCACATAGCACTTTCCTGGCTAGTTTTGCACACTTGAAAATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS-3UTR CAA 90 bp | CATGGAGACAAAGTAACTTACTGTACTTATCACATCACCTTATCAGGTAACACGGTTTGCCTTTCCTCTTaGCTTCTGGCAAAGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGDKVTYCTYHITLSGNTVCLSS*LLAKSG Trigger: ACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAAC...CGTGTTACCTGATAAGGTGATGTGATAAGTACAGTAAGTTACTTTGTCTCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS-3UTR CAA 90 bp | TATCTATCTATCTATCTATCTCTATCTAATGTGCATTGGTGTTTTGCCTGTACGGTTTGCCTTTCCTCTTaGCTTCTGGCAAAGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YLSIYLSLSNVHWCFACTVCLSS*LLAKSG Trigger: ACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAAC...CGTACAGGCAAAACACCAATGCACATTAGATAGAGATAGATAGATAGATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CCA 90 bp | AACCTTGCCGTCCAAAATTCACCATTGTCTCATAGCCTCTTTCTTTaGCTTGGACAATATAATCATCAATTTCCCTTTCCTTTGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: NLAVQNSPLSHSLFL*LGQYNHQFPFPLMT Trigger: TGTCATCAAAGGAAAGGGAAATTGATGATTATATTGTCCAAGCCAAAGAAAGAGGCTATGAGACAATGGTGAATTTTGGACGGCAAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS TCA 72 bp | ACAGATTTCATGCTCTGGGATCGCCTCAGCGCCTTGTaGGTCACCATCTCGTCATCGGAGAATGGCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TDFMLWDRLSAL*VTISSSENGPS Trigger: GGAGGGGCCATTCTCCGATGACGAGATGGTGACTCACAAGGCGCTGAGGCGATCCCAGAGCATGAAATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | GAGCCATACCGCACCTCTTTGCGGCCTTTGATGGTCTaGACAGATTTCATGCTCTGGGATCGCCTCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPYRTSLRPLMV*TDFMLWDRLSA Trigger: GGCGCTGAGGCGATCCCAGAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGTGCGGTATGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS GCA 72 bp | ATCATGCATGCTGAAACTTCGCAGACGCTCCGTTATTaGTCCTTGGCTCTTCACTGCTGCAGTGACGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: IMHAETSQTLRY*SLALHCCSDGG Trigger: GCCGCCGTCACTGCAGCAGTGAAGAGCCAAGGAGCAATAACGGAGCGTCTGCGAAGTTTCAGCATGCATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | AGTCTGGTAGGGTCTGTGTCCCACGGGCTCATCCCCTaGGATAGCTGTCAGATCATGCATGCTGAAACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLVGSVSHGLIP*DSCQIMHAETS Trigger: CGAAGTTTCAGCATGCATGATCTGACAGCTATCCAAGGGGATGAGCCCGTGGGACACAGACCCTACCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | AGGCTGGTGACTCGGTGGCTTGTTTGCCTTTCCTCTTaGCTTCTGGCAAAGTCTGGTAGGGTCTGTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLVTRWLVCLSS*LLAKSGRVCVP Trigger: TGGGACACAGACCCTACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 90 bp | TGCATAGCCTGCATGGGGTCCTTGTTCAATTCCTCTTTGCGGCCTTaGATGGTCTTGACAGATTTCATGCTCTGGGATCGCCTCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: CIACMGSLFNSSLRP*MVLTDFMLWDRLSA Trigger: GGCGCTGAGGCGATCCCAGAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGACCCCATGCAGGCTATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS GCA 72 bp | GTGGAATTCCATAGGCTGGTGACTCGGTGGCTTGTTTaGCTTTCCTCTTTGCTTCTGGCAAAGTCTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VEFHRLVTRWLV*LSSLLLAKSGR Trigger: CCTACCAGACTTTGCCAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCTATGGAATTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | TCCTTGTTCAATTCCTCTTTGCGGCCTTTGATGGTCTaGACAGATTTCATGCTCTGGGATCGCCTCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLFNSSLRPLMV*TDFMLWDRLSA Trigger: GGCGCTGAGGCGATCCCAGAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | CGGAAGTGTCGTTCTTGCATAGCCTGCATGGGGTCCTaGTTCAATTCCTCTTTGCGGCCTTTGATGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKCRSCIACMGS*FNSSLRPLMVL Trigger: CAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGACCCCATGCAGGCTATGCAAGAACGACACTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS CAA 90 bp | TGTCGTTCTTGCATAGCCTGCATGGGGTCCTTGTTCAATTCCTCTTaGCGGCCTTTGATGGTCTTGACAGATTTCATGCTCTGGGATCGC | + |
|
Preference number: 6 (lower is better) Translates to: CRSCIACMGSLFNSS*RPLMVLTDFMLWDR Trigger: GCGATCCCAGAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGACCCCATGCAGGCTATGCAAGAACGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | TGCATGGGGTCCTTGTTCAATTCCTCTTTGCGGCCTTaGATGGTCTTGACAGATTTCATGCTCTGGGATCGC | + |
|
Preference number: 6 (lower is better) Translates to: CMGSLFNSSLRP*MVLTDFMLWDR Trigger: GCGATCCCAGAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGACCCCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS GCA 72 bp | GAAGGCAATCTTCAGCTCATAGTACAGGGGAAACCATaGAAGTGTCTGATCGGCCACCGTTTCAATGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGNLQLIVQGKP*KCLIGHRFNDS Trigger: ACTGTCATTGAAACGGTGGCCGATCAGACACTTGCATGGTTTCCCCTGTACTATGAGCTGAAGATTGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CCA 72 bp | CATCTTTCAGTGGAATTCCATAGGCTGGTGACTCGGTaGCTTGTTTGCCTTTCCTCTTTGCTTCTGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLSVEFHRLVTR*LVCLSSLLLAK Trigger: CTTTGCCAGAAGCAAAGAGGAAAGGCAAACAAGCCACCGAGTCACCAGCCTATGGAATTCCACTGAAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | TATTTTAGTGAGCCATACCGCACCTCTTTGCGGCCTTaGATGGTCTTGACAGATTTCATGCTCTGGGATCGC | + |
|
Preference number: 6 (lower is better) Translates to: YFSEPYRTSLRP*MVLTDFMLWDR Trigger: GCGATCCCAGAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGTGCGGTATGGCTCACTAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020023.9 |
||
| CDS CAA 72 bp | TGCATAGCCTGCATGGGGTCCTTGTTCAATTCCTCTTaGCGGCCTTTGATGGTCTTGACAGATTTCATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CIACMGSLFNSS*RPLMVLTDFML Trigger: GAGCATGAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGACCCCATGCAGGCTATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS CAA 90 bp | AATGTAGCTCGGAAGTGTCGTTCTTGCATAGCCTGCATGGGGTCCTaGTTCAATTCCTCTTTGCGGCCTTTGATGGTCTTGACAGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: NVARKCRSCIACMGS*FNSSLRPLMVLTDF Trigger: GAAATCTGTCAAGACCATCAAAGGCCGCAAAGAGGAATTGAACAAGGACCCCATGCAGGCTATGCAAGAACGACACTTCCGAGCTACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217841.2 |
||
| CDS TCA 72 bp | GAAACCATGCAAGTGTCTGATCGGCCACCGTTTCAATaGCAGTGTAGAGGGCAAAGACGATCCAATACATCA | + |
|
Preference number: 6 (lower is better) Translates to: ETMQVSDRPPFQ*QCRGQRRSNTS Trigger: TGATGTATTGGATCGTCTTTGCCCTCTACACTGTCATTGAAACGGTGGCCGATCAGACACTTGCATGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS TCA 72 bp | AGACGATCCAATACATCATCCAGCGAACGTATTCCTTaGCGTTTTTCGTCTTCACGGCTTTGTAGGAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSNTSSSERIP*RFSSSRLCRNS Trigger: ACTATTCCTACAAAGCCGTGAAGACGAAAAACGTCAAGGAATACGTTCGCTGGATGATGTATTGGATCGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 90 bp | CGGCTGCAGCTGCTAAATTCAAACCTTGCCGTCCAAAATTCACCATaGTCTCATAGCCTCTTTCTTTGGCTTGGACAATATAATCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: RLQLLNSNLAVQNSP*SHSLFLWLGQYNHQ Trigger: TTGATGATTATATTGTCCAAGCCAAAGAAAGAGGCTATGAGACAATGGTGAATTTTGGACGGCAAGGTTTGAATTTAGCAGCTGCAGCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||
| CDS CAA 72 bp | CTGCTAAATTCAAACCTTGCCGTCCAAAATTCACCATaGTCTCATAGCCTCTTTCTTTGGCTTGGACAATAT | + |
|
Preference number: 6 (lower is better) Translates to: LLNSNLAVQNSP*SHSLFLWLGQY Trigger: ATATTGTCCAAGCCAAAGAAAGAGGCTATGAGACAATGGTGAATTTTGGACGGCAAGGTTTGAATTTAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020023.9 ENSMUST00000217841.2 |
||