Pregenerated sensors for REEP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052852Ensembl transcript IDs: ENSMUST00000121469.2, ENSMUST00000212631.2, ENSMUST00000212792.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCGTGCTAAGTAAGGGTGAGCTGGCCTGCCTGAAGCAGGGCCAGTaGTCCCCAAAGGGCTCGGAAGCTTCTGTTCTTGACCCCAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: AVLSKGELACLKQGQ*SPKGSEASVLDPKG Trigger: CCCTTTGGGGTCAAGAACAGAAGCTTCCGAGCCCTTTGGGGAGCACTGGCCCTGCTTCAGGCAGGCCAGCTCACCCTTACTTAGCACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 90 bp | CTCAGCCGCCAGAAGCACACCACCGCCTTCCTGCAGGAGAAGGGATaGCTTACTGGCACTGCCTTTGTAAGGAAGTTGGAGACATTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LSRQKHTTAFLQEKG*LTGTAFVRKLETLP Trigger: AGGCAATGTCTCCAACTTCCTTACAAAGGCAGTGCCAGTAAGGCATCCCTTCTCCTGCAGGAAGGCGGTGGTGTGCTTCTGGCGGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | ACAAGGTGCTCAGATGTAGGCTCCTGGAGAAGTCGGCCACAGCGCTaGTCCCTGAAGGAGAAACACTCTTGCCAAGCCCTTCTGAGATAC | + |
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Preference number: 1 (lower is better) Translates to: TRCSDVGSWRSRPQR*SLKEKHSCQALLRY Trigger: GTATCTCAGAAGGGCTTGGCAAGAGTGTTTCTCCTTCAGGGACCAGCGCTGTGGCCGACTTCTCCAGGAGCCTACATCTGAGCACCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR TCA 90 bp | AGGTACAGCACAACAAACCTATTAGGACAGCCAGGGACCCAGAACTaGAGAAGCCGTACTCTTCCTCCCTCTTCCCTGATGCCCACCAAC | + |
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Preference number: 1 (lower is better) Translates to: RYSTTNLLGQPGTQN*RSRTLPPSSLMPTN Trigger: GTTGGTGGGCATCAGGGAAGAGGGAGGAAGAGTACGGCTTCTTCAGTTCTGGGTCCCTGGCTGTCCTAATAGGTTTGTTGTGCTGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | GGGGTGAGCTTGAAGAGGGCAGATGCTTTGCTTAATGGGTTCAGATaGATATGGGGCCCAGGCAGACTATTTACCGTCAGTCATCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: GVSLKRADALLNGFR*IWGPGRLFTVSHQL Trigger: GAGCTGATGACTGACGGTAAATAGTCTGCCTGGGCCCCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAAGCTCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | TTTTGCCTTGTGTACTCTAAAACAAGGTGCTCAGATGTAGGCTCCTaGAGAAGTCGGCCACAGCGCTGGTCCCTGAAGGAGAAACACTCT | + |
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Preference number: 1 (lower is better) Translates to: FCLVYSKTRCSDVGS*RSRPQRWSLKEKHS Trigger: AGAGTGTTTCTCCTTCAGGGACCAGCGCTGTGGCCGACTTCTCCAGGAGCCTACATCTGAGCACCTTGTTTTAGAGTACACAAGGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | AACGAAAACACCAACTCTACGCACACACAGACTAGCCCTACAATTTaGCTCAGCTATCAGAGGAGAGGGCAGCTCCCTCAACGCAATGTT | + |
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Preference number: 1 (lower is better) Translates to: NENTNSTHTQTSPTI*LSYQRRGQLPQRNV Trigger: AACATTGCGTTGAGGGAGCTGCCCTCTCCTCTGATAGCTGAGCCAAATTGTAGGGCTAGTCTGTGTGTGCGTAGAGTTGGTGTTTTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | AGCTTGAAGAGGGCAGATGCTTTGCTTAATGGGTTCAGATGGATATaGGGCCCAGGCAGACTATTTACCGTCAGTCATCAGCTCTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: SLKRADALLNGFRWI*GPGRLFTVSHQLLG Trigger: ACCCAAGAGCTGATGACTGACGGTAAATAGTCTGCCTGGGCCCCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | AATTCTCACTGCAGTCCTGGCTTGTATAAAACATCCACGAAGACATaGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACCTTCCACACA | + |
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Preference number: 1 (lower is better) Translates to: NSHCSPGLYKTSTKT*SEHECQSFPFTFHT Trigger: TGTGTGGAAGGTGAATGGGAAGGACTGACACTCATGCTCACTCCATGTCTTCGTGGATGTTTTATACAAGCCAGGACTGCAGTGAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | AATCCAAATAGGAGTAACTGGGTTGTGACTGCTGCATGCATTCCATaGAACGAAAACACCAACTCTACGCACACACAGACTAGCCCTACA | + |
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Preference number: 1 (lower is better) Translates to: NPNRSNWVVTAACIP*NENTNSTHTQTSPT Trigger: TGTAGGGCTAGTCTGTGTGTGCGTAGAGTTGGTGTTTTCGTTCCATGGAATGCATGCAGCAGTCACAACCCAGTTACTCCTATTTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 90 bp | GAGGATGAAGCACATCTTCCACCACGTCTAATACTTCAAATACTGTaGAAGGTGAAGAACTGGGATGGCTACGTGATGGTTGTGGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: EDEAHLPPRLILQIL*KVKNWDGYVMVVVD Trigger: ATCAACCACAACCATCACGTAGCCATCCCAGTTCTTCACCTTGCACAGTATTTGAAGTATTAGACGTGGTGGAAGATGTGCTTCATCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR CCA 90 bp | AGTAATACAGCATGTCTGAGGAGTGCTTCAAACTGGGTTTTGGCATaGCTGAGTACAAACTCAAGAGCCTCGATGTGTTATGACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SNTACLRSASNWVLA*LSTNSRASMCYDFL Trigger: CAGGAAGTCATAACACATCGAGGCTCTTGAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGCTGTATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | CTTCAGGGCATAGCTGTGAACAAATATAATCCAAATAGGAGTAACTaGGTTGTGACTGCTGCATGCATTCCATGGAACGAAAACACCAAC | + |
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Preference number: 1 (lower is better) Translates to: LQGIAVNKYNPNRSN*VVTAACIPWNENTN Trigger: GTTGGTGTTTTCGTTCCATGGAATGCATGCAGCAGTCACAACCCAGTTACTCCTATTTGGATTATATTTGTTCACAGCTATGCCCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 90 bp | CTCAACGCAATGTTATCTAAGTCAGAGACTTGTCAAAATTCTCACTaGAGTCCTGGCTTGTATAAAACATCCACGAAGACATGGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LNAMLSKSETCQNSH*SPGLYKTSTKTWSE Trigger: CTCACTCCATGTCTTCGTGGATGTTTTATACAAGCCAGGACTGCAGTGAGAATTTTGACAAGTCTCTGACTTAGATAACATTGCGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 90 bp | AACAAATATAATCCAAATAGGAGTAACTGGGTTGTGACTGCTGCATaGATTCCATGGAACGAAAACACCAACTCTACGCACACACAGACT | + |
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Preference number: 1 (lower is better) Translates to: NKYNPNRSNWVVTAA*IPWNENTNSTHTQT Trigger: AGTCTGTGTGTGCGTAGAGTTGGTGTTTTCGTTCCATGGAATGCATGCAGCAGTCACAACCCAGTTACTCCTATTTGGATTATATTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 90 bp | TGTTTGCATAGCTCGGTACCAGAGCGGTTTGTAATTGAGCCTGTTTaGAGTCAGTTGACAGTTCTATGTGGTATACAACACTATTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: CLHSSVPERFVIEPV*SQLTVLCGIQHYFS Trigger: AGAGAAATAGTGTTGTATACCACATAGAACTGTCAACTGACTGCAAACAGGCTCAATTACAAACCGCTCTGGTACCGAGCTATGCAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 90 bp | TCAGTCATCAGCTCTTGGGTTAGTTCTGAAATACAAAATCACCTTTaGAAAATTCCATTAGGTGTATCTGGCAGCAATGAACTCGCAACT | + |
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Preference number: 1 (lower is better) Translates to: SVISSWVSSEIQNHL*KIPLGVSGSNELAT Trigger: AGTTGCGAGTTCATTGCTGCCAGATACACCTAATGGAATTTTCCAAAGGTGATTTTGTATTTCAGAACTAACCCAAGAGCTGATGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 90 bp | ATCAGGCATTATAACAAAACAGCAGAGCTTCAGCCTTTGGAATACTaGAATTTACATCCTGTAGATACACAGTCCAGTATACTATTAATT | + |
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Preference number: 1 (lower is better) Translates to: IRHYNKTAELQPLEY*NLHPVDTQSSILLI Trigger: AATTAATAGTATACTGGACTGTGTATCTACAGGATGTAAATTGCAGTATTCCAAAGGCTGAAGCTCTGCTGTTTTGTTATAATGCCTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGTGCTCAGATGTAGGCTCCTGGAGAAGTCGGCCACAGCGCTGGTCCCTGCTGCAGGAGAAGGGATaGCTTACTGGCACTGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TRCSDVGSWRSRPQRWSLLQEKG*LTGTAF Trigger: AAAGGCAGTGCCAGTAAGGCATCCCTTCTCCTGCAG...CAGGGACCAGCGCTGTGGCCGACTTCTCCAGGAGCCTACATCTGAGCACCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGCGGCCAGGGACCCAGAACTaGAGAAGCCGTACTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QLMEQSPSACLHSSVPERPGTQN*RSRTLP Trigger: AGGAAGAGTACGGCTTCTTCAGTTCTGGGTCCCTGG...CCGCTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGTGCTCAGATGTAGGCTCCTGGAGAAGTCGGCCACAGCGCTGGTCCCTGTTCAGTGGCCGAGGATaGGGTACTTTTCTTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: TRCSDVGSWRSRPQRWSLFSGRG*GTFLPE Trigger: TTCAGGAAGAAAAGTACCTCATCCTCGGCCACTGAA...CAGGGACCAGCGCTGTGGCCGACTTCTCCAGGAGCCTACATCTGAGCACCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACACCACCGCCTTCCTGCAGGAGAAGGGATGCCTTACTGGCACTGCCTTTGCTCACGTGGTTTCAGTaGCCGAGGATGAGGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: STPPPSCRRRDALLALPLLTWFQ*PRMRYF Trigger: AAAGTACCTCATCCTCGGCCACTGAAACCACGTGAG...CAAAGGCAGTGCCAGTAAGGCATCCCTTCTCCTGCAGGAAGGCGGTGGTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGGCCCAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTATTGGCTCATCTCACGTaGTTTCAGTGGCCGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: AKAQLMEQSPSACLHSSVLAHLT*FQWPRM Trigger: CATCCTCGGCCACTGAAACCACGTGAGATGAGCCAA...TACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTGGGCCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR-3UTR TCA 90 bp | ACGCACACACAGACTAGCCCTACAATTTGGCTCAGCTATCAGAGGAGAGGGCAGTTCCTCCCTCTTCCCTaGTGCCCACCAACTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: THTQTSPTIWLSYQRRGQFLPLP*CPPTFF Trigger: GAAGAAAGTTGGTGGGCATCAGGGAAGAGGGAGGAA...CTGCCCTCTCCTCTGATAGCTGAGCCAAATTGTAGGGCTAGTCTGTGTGTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGCAACTTTCTTCCTGTTaGTGGAACACTGCACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AQLMEQSPSACLHSSVPEQLSSC*WNTALL Trigger: CAGGAGTGCAGTGTTCCAGCAACAGGAAGAAAGTTG...CTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGTCTGAGGAGTGCTTCAAACTGGGTTTTGGCATGGCTGAGTACAAACTCAGCCACAGCTGCCTGTaGCTTAGCCTCAGTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SMSEECFKLGFGMAEYKLSHSCL*LSLSPP Trigger: GGGAGGACTGAGGCTAAGCCACAGGCAGCTGTGGCT...GAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACCTTCCACACAAGCCAGAAAGTTCCTCCCTCTTCCCTaGTGCCCACCAACTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GVSMSVSPSHSPSTQARKFLPLP*CPPTFF Trigger: GAAGAAAGTTGGTGGGCATCAGGGAAGAGGGAGGAA...CTTTCTGGCTTGTGTGGAAGGTGAATGGGAAGGACTGACACTCATGCTCACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATGTCTGAGGAGTGCTTCAAACTGGGTTTTGGCATGGCTGAGTACAAACTCGGAACACTGCACTCCTaGCTCCGCTCTGACCTACCA | + |
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Preference number: 2 (lower is better) Translates to: SMSEECFKLGFGMAEYKLGTLHS*LRSDLP Trigger: TGGTAGGTCAGAGCGGAGGCAGGAGTGCAGTGTTCC...GAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGTACTCTAAAACAAGGTaGTCAGATGTAGGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AQLMEQSPSACLHSSVPEYSKTR*SDVGSW Trigger: CCAGGAGCCTACATCTGAGCACCTTGTTTTAGAGTA...CTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGGCTGCATGCATTCCATaGAACGAAAACACCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: AQLMEQSPSACLHSSVPEAACIP*NENTNS Trigger: AGAGTTGGTGTTTTCGTTCCATGGAATGCATGCAGC...CTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CAA 90 bp | TCTCTTGTCTGGAGCTGTGGGGTGAGCTTGAAGAGGGCAGATGCTTaGCTTAATGGGTTCAGATGGATATGGGGCCCAGGCAGACTATTT | + |
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Preference number: 2 (lower is better) Translates to: SLVWSCGVSLKRADA*LNGFRWIWGPGRLF Trigger: AAATAGTCTGCCTGGGCCCCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAAGCTCACCCCACAGCTCCAGACAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | TTACCGTCAGTCATCAGCTCTTGGGTTAGTTCTGAAATACAAAATCACCTTTGGAAGGGTGAGCTGGCCTaGCTGAAGCAGGGCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LPSVISSWVSSEIQNHLWKGELA*LKQGQC Trigger: GCACTGGCCCTGCTTCAGGCAGGCCAGCTCACCCTT...CCAAAGGTGATTTTGTATTTCAGAACTAACCCAAGAGCTGATGACTGACGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACTAGAGGAAATGCGCACAGTCACAATCTGGAACATGAGCTCTTCGAGCGTCTCCCAGTGCATGTTTaGATAGCTCGGTACCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: ETRGNAHSHNLEHELFERLPVHV*IARYQS Trigger: GCTCTGGTACCGAGCTATGCAAACATGCACTGGGAG...ACGCTCGAAGAGCTCATGTTCCAGATTGTGACTGTGCGCATTTCCTCTAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR CAA 90 bp | TGTTTGAAGGGTGTCACTTCTCTTGTCTGGAGCTGTGGGGTGAGCTaGAAGAGGGCAGATGCTTTGCTTAATGGGTTCAGATGGATATGG | + |
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Preference number: 2 (lower is better) Translates to: CLKGVTSLVWSCGVS*KRADALLNGFRWIW Trigger: CCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAAGCTCACCCCACAGCTCCAGACAAGAGAAGTGACACCCTTCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | TGTACATCTCAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTGCGGCCATGTCCGTGGGCTaGACACTCGAAGCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: CTSQQHHGKSAYRSKNTAAMSVG*TLEAHP Trigger: TGGGTGTGCTTCGAGTGTGCAGCCCACGGACATGGC...CGCAGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTGAGATGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACCTTCCACACAAGCCAGAAAGATGCCTTACTGGCACTaGCTTTGTAAGGAAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GVSMSVSPSHSPSTQARKMPYWH*LCKEVG Trigger: TCCAACTTCCTTACAAAGGCAGTGCCAGTAAGGCAT...CTTTCTGGCTTGTGTGGAAGGTGAATGGGAAGGACTGACACTCATGCTCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCAGGCTTTCCTGCACCTGTTCCTCTTCATCCTGGCTACACCCAGCTGACAAGATACTCACAATTCTaGCAGCAGCTGATCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: LSGFPAPVPLHPGYTQLTRYSQF*QQLIFI Trigger: AATGAAGATCAGCTGCTGGCAGAATTGTGAGTATCT...TGTCAGCTGGGTGTAGCCAGGATGAAGAGGAACAGGTGCAGGAAAGCCTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGCGGAAAGATCACGTCGTTTaGATTTACAGGACTAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QLMEQSPSACLHSSVPERKDHVV*IYRTKN Trigger: GTTTTTAGTCCTGTAAATGCAAACGACGTGATCTTT...CCGCTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCACCAACTTTCTTCCTGTTGCTGGAACACTGCACTCCTGCCTCCGCTCTGAAAGATCACGTCGTTTaGATTTACAGGACTAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: CPPTFFLLLEHCTPASALKDHVV*IYRTKN Trigger: GTTTTTAGTCCTGTAAATGCAAACGACGTGATCTTT...CAGAGCGGAGGCAGGAGTGCAGTGTTCCAGCAACAGGAAGAAAGTTGGTGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CAA 90 bp | GCGAGAAGTAATACAGCATGTCTGAGGAGTGCTTCAAACTGGGTTTaGGCATGGCTGAGTACAAACTCAAGAGCCTCGATGTGTTATGAC | + |
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Preference number: 2 (lower is better) Translates to: ARSNTACLRSASNWV*AWLSTNSRASMCYD Trigger: GTCATAACACATCGAGGCTCTTGAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGCTGTATTACTTCTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR TCA 90 bp | CTATCAGAGGAGAGGGCAGCTCCCTCAACGCAATGTTATCTAAGTCAGAGACTTAATTCTGCCAGCAGCTaGTCTTCATTCCCTAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LSEERAAPSTQCYLSQRLNSASS*SSFPKW Trigger: CCATTTAGGGAATGAAGATCAGCTGCTGGCAGAATT...AAGTCTCTGACTTAGATAACATTGCGTTGAGGGAGCTGCCCTCTCCTCTGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGTGTCTCATGTGTTTTGAGCACATCTGTAACAAAAGCTAGTTCTAGACTTGCCATGTCCGTGGGCTaGACACTCGAAGCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: LSVSCVLSTSVTKASSRLAMSVG*TLEAHP Trigger: TGGGTGTGCTTCGAGTGTGCAGCCCACGGACATGGC...AAGTCTAGAACTAGCTTTTGTTACAGATGTGCTCAAAACACATGAGACACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACTAGAGGAAATGCGCACAGTCACAATCTGGAACATGAGCTCTTCGAGCGTACTTCTGGCAGCCCTTaGGAGTTCATTACATTAAGC | + |
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Preference number: 2 (lower is better) Translates to: ETRGNAHSHNLEHELFERTSGSP*EFITLS Trigger: GCTTAATGTAATGAACTCGCAAGGGCTGCCAGAAGT...ACGCTCGAAGAGCTCATGTTCCAGATTGTGACTGTGCGCATTTCCTCTAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACTAGAGGAAATGCGCACAGTCACAATCTGGAACATGAGCTCTTCGAGCGTAACTGGGTTTTGGCATaGCTGAGTACAAACTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ETRGNAHSHNLEHELFERNWVLA*LSTNSR Trigger: TCTTGAGTTTGTACTCAGCCATGCCAAAACCCAGTT...ACGCTCGAAGAGCTCATGTTCCAGATTGTGACTGTGCGCATTTCCTCTAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGGTCATTCACATCATATGTCAGTCTACATACAAATACACAGCTTGTCAGACACCACCGCCTTCCTaGAGGAGAAGGGATGCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: YKVIHIICQSTYKYTACQTPPPS*RRRDAL Trigger: TAAGGCATCCCTTCTCCTGCAGGAAGGCGGTGGTGT...CTGACAAGCTGTGTATTTGTATGTAGACTGACATATGATGTGAATGACCTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGTGTCTCATGTGTTTTGAGCACATCTGTAACAAAAGCTAGTTCTAGACTTACACCACCGCCTTCCTaGAGGAGAAGGGATGCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LSVSCVLSTSVTKASSRLTPPPS*RRRDAL Trigger: TAAGGCATCCCTTCTCCTGCAGGAAGGCGGTGGTGT...AAGTCTAGAACTAGCTTTTGTTACAGATGTGCTCAAAACACATGAGACACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACAAACAAATTACAAATGTACATCTCAGCAGCATCATGGAAAGAGTGCTTTGGATCCGGGGCTGTTaGCTCATCTCACGTGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CNKQITNVHLSSIMERVLWIRGC*LISRGF Trigger: GAAACCACGTGAGATGAGCCAACAGCCCCGGATCCA...AAGCACTCTTTCCATGATGCTGCTGAGATGTACATTTGTAATTTGTTTGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACCGTCAGTCATCAGCTCTTGGGTTAGTTCTGAAATACAAAATCACCTTTGGCTTCTGGCGACCATTTaGGATTTGAGTGTCTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: LPSVISSWVSSEIQNHLWLLATI*DLSVSC Trigger: ACATGAGACACTCAAATCTCAAATGGTCGCCAGAAG...CCAAAGGTGATTTTGTATTTCAGAACTAACCCAAGAGCTGATGACTGACGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CAA 90 bp | AAGATGTTTATCAGGCATTATAACAAAACAGCAGAGCTTCAGCCTTaGGAATACTGCAATTTACATCCTGTAGATACACAGTCCAGTATA | + |
|
Preference number: 2 (lower is better) Translates to: KMFIRHYNKTAELQP*EYCNLHPVDTQSSI Trigger: TATACTGGACTGTGTATCTACAGGATGTAAATTGCAGTATTCCAAAGGCTGAAGCTCTGCTGTTTTGTTATAATGCCTGATAAACATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR GCA 72 bp | AGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTaGACACTCGAAGCACACCCAGCCTGCGGACTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RRGERVKAMSVG*TLEAHPACGLP Trigger: TGGAAGTCCGCAGGCTGGGTGTGCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| 3UTR GCA 72 bp | AACCACTCAGCCGCCAGAAGCACACCACCGCCTTCCTaGAGGAGAAGGGATGCCTTACTGGCACTGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NHSAARSTPPPS*RRRDALLALPL Trigger: CAAAGGCAGTGCCAGTAAGGCATCCCTTCTCCTGCAGGAAGGCGGTGGTGTGCTTCTGGCGGCTGAGTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR GCA 72 bp | AGTAAGGGTGAGCTGGCCTGCCTGAAGCAGGGCCAGTaGTCCCCAAAGGGCTCGGAAGCTTCTGTTCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKGELACLKQGQ*SPKGSEASVLD Trigger: GTCAAGAACAGAAGCTTCCGAGCCCTTTGGGGAGCACTGGCCCTGCTTCAGGCAGGCCAGCTCACCCTTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR GCA 72 bp | ACCAACTTTCTTCCTGTTGCTGGAACACTGCACTCCTaGCTCCGCTCTGACCTACCAACCACTCAGCCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TNFLPVAGTLHS*LRSDLPTTQPP Trigger: TGGCGGCTGAGTGGTTGGTAGGTCAGAGCGGAGGCAGGAGTGCAGTGTTCCAGCAACAGGAAGAAAGTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | TCAGATGTAGGCTCCTGGAGAAGTCGGCCACAGCGCTaGTCCCTGAAGGAGAAACACTCTTGCCAAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SDVGSWRSRPQR*SLKEKHSCQAL Trigger: AAGGGCTTGGCAAGAGTGTTTCTCCTTCAGGGACCAGCGCTGTGGCCGACTTCTCCAGGAGCCTACATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | CCAGTGCTCCCCAAAGGGCTCGGAAGCTTCTGTTCTTaGCCCCAAAGGGCAGGAAGGGTGAGATTAGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: PVLPKGLGSFCS*PQRAGRVRLGT Trigger: TGTACCTAATCTCACCCTTCCTGCCCTTTGGGGTCAAGAACAGAAGCTTCCGAGCCCTTTGGGGAGCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR GCA 72 bp | CAGAAGCACACCACCGCCTTCCTGCAGGAGAAGGGATaGCTTACTGGCACTGCCTTTGTAAGGAAGTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QKHTTAFLQEKG*LTGTAFVRKLE Trigger: CTCCAACTTCCTTACAAAGGCAGTGCCAGTAAGGCATCCCTTCTCCTGCAGGAAGGCGGTGGTGTGCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | GTGTACTCTAAAACAAGGTGCTCAGATGTAGGCTCCTaGAGAAGTCGGCCACAGCGCTGGTCCCTGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VYSKTRCSDVGS*RSRPQRWSLKE Trigger: CTCCTTCAGGGACCAGCGCTGTGGCCGACTTCTCCAGGAGCCTACATCTGAGCACCTTGTTTTAGAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | CATCCTGGCTACACCCAGCTGACACGTTGGTATGTTTaGAGGGTGTCACTTCTCTTGTCTGGAGCTGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HPGYTQLTRWYV*RVSLLLSGAVG Trigger: CCCCACAGCTCCAGACAAGAGAAGTGACACCCTTCAAACATACCAACGTGTCAGCTGGGTGTAGCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | ACATGTGTGGATCCGGGGCTGTTGGCTCATCTCACGTaGTTTCAGTGGCCGAGGATGAGGTACTTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCVDPGLLAHLT*FQWPRMRYFSS Trigger: GGAAGAAAAGTACCTCATCCTCGGCCACTGAAACCACGTGAGATGAGCCAACAGCCCCGGATCCACACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR CCA 72 bp | ACCAACTCTACGCACACACAGACTAGCCCTACAATTTaGCTCAGCTATCAGAGGAGAGGGCAGCTCCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TNSTHTQTSPTI*LSYQRRGQLPQ Trigger: TTGAGGGAGCTGCCCTCTCCTCTGATAGCTGAGCCAAATTGTAGGGCTAGTCTGTGTGTGCGTAGAGTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACATCCACGAAGACATGGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACCTGTGGATCCGGGGCTGTaGGCTCATCTCACGTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KHPRRHGVSMSVSPSHSPVDPGL*AHLTWF Trigger: AAACCACGTGAGATGAGCCAACAGCCCCGGATCCAC...AGGTGAATGGGAAGGACTGACACTCATGCTCACTCCATGTCTTCGTGGATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR TCA 72 bp | AGAACTGAAGAAGCCGTACTCTTCCTCCCTCTTCCCTaGTGCCCACCAACTTTCTTCCTGTTGCTGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: RTEEAVLFLPLP*CPPTFFLLLEH Trigger: GTGTTCCAGCAACAGGAAGAAAGTTGGTGGGCATCAGGGAAGAGGGAGGAAGAGTACGGCTTCTTCAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | ACAACAAACCTATTAGGACAGCCAGGGACCCAGAACTaGAGAAGCCGTACTCTTCCTCCCTCTTCCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TTNLLGQPGTQN*RSRTLPPSSLM Trigger: CATCAGGGAAGAGGGAGGAAGAGTACGGCTTCTTCAGTTCTGGGTCCCTGGCTGTCCTAATAGGTTTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | CAACTGAAACCCTTTGTGAAATGGCCAAGGCCCAGCTaGTGGAGCAGTCTCCCAGTGCATGTTTGCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLKPFVKWPRPS*WSSLPVHVCIA Trigger: AGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTGGGCCTTGGCCATTTCACAAAGGGTTTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | CTGCACCTGTTCCTCTTCATCCTGGCTACACCCAGCTaGCACGTTGGTATGTTTGAAGGGTGTCACTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHLFLFILATPS*HVGMFEGCHFS Trigger: AGAGAAGTGACACCCTTCAAACATACCAACGTGTCAGCTGGGTGTAGCCAGGATGAAGAGGAACAGGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | ACGTTGGTATGTTTGAAGGGTGTCACTTCTCTTGTCTaGAGCTGTGGGGTGAGCTTGAAGAGGGCAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLVCLKGVTSLV*SCGVSLKRADA Trigger: AGCATCTGCCCTCTTCAAGCTCACCCCACAGCTCCAGACAAGAGAAGTGACACCCTTCAAACATACCAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | TCTCTCAGGCTTTCCTGCACCTGTTCCTCTTCATCCTaGCTACACCCAGCTGACACGTTGGTATGTTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLRLSCTCSSSS*LHPADTLVCLK Trigger: CTTCAAACATACCAACGTGTCAGCTGGGTGTAGCCAGGATGAAGAGGAACAGGTGCAGGAAAGCCTGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | AGGGCAGATGCTTTGCTTAATGGGTTCAGATGGATATaGGGCCCAGGCAGACTATTTACCGTCAGTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RADALLNGFRWI*GPGRLFTVSHQ Trigger: CTGATGACTGACGGTAAATAGTCTGCCTGGGCCCCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCTGCGTAGACAGAGCACCGCACTTCTACATACAAGGTCATTCACATCATATCGGAAGCTTCTGTTCTaGACCCCAAAGGGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILRRQSTALLHTRSFTSYRKLLF*TPKGRK Trigger: CTTCCTGCCCTTTGGGGTCAAGAACAGAAGCTTCCG...ATATGATGTGAATGACCTTGTATGTAGAAGTGCGGTGCTCTGTCTACGCAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | TCAGTCCTCCCTAGACCCTGCCTTCTGGCGACCATTTaGGATTTGAGTGTCTCATGTGTTTTGAGCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SVLPRPCLLATI*DLSVSCVLSTS Trigger: AGATGTGCTCAAAACACATGAGACACTCAAATCTCAAATGGTCGCCAGAAGGCAGGGTCTAGGGAGGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CCA 72 bp | TGCAGTCCTGGCTTGTATAAAACATCCACGAAGACATaGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACC | + |
|
Preference number: 3 (lower is better) Translates to: CSPGLYKTSTKT*SEHECQSFPFT Trigger: GGTGAATGGGAAGGACTGACACTCATGCTCACTCCATGTCTTCGTGGATGTTTTATACAAGCCAGGACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 72 bp | AGGAGTAACTGGGTTGTGACTGCTGCATGCATTCCATaGAACGAAAACACCAACTCTACGCACACACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RSNWVVTAACIP*NENTNSTHTQT Trigger: AGTCTGTGTGTGCGTAGAGTTGGTGTTTTCGTTCCATGGAATGCATGCAGCAGTCACAACCCAGTTACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 72 bp | TTGAAGAGGGCAGATGCTTTGCTTAATGGGTTCAGATaGATATGGGGCCCAGGCAGACTATTTACCGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LKRADALLNGFR*IWGPGRLFTVS Trigger: ACTGACGGTAAATAGTCTGCCTGGGCCCCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGCGGTTTGTAATTGAGCCTAACTTCTGGCAGCCCTaGCGAGTTCATTACATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPSACLHSSVPERFVIEPNFWQP*RVHYIK Trigger: CTTAATGTAATGAACTCGCAAGGGCTGCCAGAAGTT...AGGCTCAATTACAAACCGCTCTGGTACCGAGCTATGCAAACATGCACTGGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCCACGAAGACATGGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACCTTCCTCTACATTTTTGTTTTaGCAGCTCTCTCACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HPRRHGVSMSVSPSHSPSSTFLF*QLSHQN Trigger: GTTCTGGTGAGAGAGCTGCAAAAACAAAAATGTAGA...GGAAGGTGAATGGGAAGGACTGACACTCATGCTCACTCCATGTCTTCGTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR CCA 72 bp | GCATGTCTGAGGAGTGCTTCAAACTGGGTTTTGGCATaGCTGAGTACAAACTCAAGAGCCTCGATGTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ACLRSASNWVLA*LSTNSRASMCY Trigger: ATAACACATCGAGGCTCTTGAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR-3UTR CAA 90 bp | GCAATGTTATCTAAGTCAGAGACTTGTCAAAATTCTCACTGCAGTCCTGGCTTGCCAACTTTCTTCCTGTaGCTGGAACACTGCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AMLSKSETCQNSHCSPGLPTFFL*LEHCTP Trigger: AGGAGTGCAGTGTTCCAGCAACAGGAAGAAAGTTGG...CAAGCCAGGACTGCAGTGAGAATTTTGACAAGTCTCTGACTTAGATAACATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| 3UTR GCA 72 bp | AATCCAAATAGGAGTAACTGGGTTGTGACTGCTGCATaGATTCCATGGAACGAAAACACCAACTCTACGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NPNRSNWVVTAA*IPWNENTNSTH Trigger: GTGCGTAGAGTTGGTGTTTTCGTTCCATGGAATGCATGCAGCAGTCACAACCCAGTTACTCCTATTTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR GCA 72 bp | GCACATCTTCCACCACGTCTAATACTTCAAATACTGTaGAAGGTGAAGAACTGGGATGGCTACGTGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: AHLPPRLILQIL*KVKNWDGYVMV Trigger: AACCATCACGTAGCCATCCCAGTTCTTCACCTTGCACAGTATTTGAAGTATTAGACGTGGTGGAAGATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR GCA 72 bp | GTCTTAAGTCAGCGAACTAGAAACATTCATTTATCCTaGGTAGACAGAGCACCGCACTTCTACATACAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VLSQRTRNIHLS*VDRAPHFYIQG Trigger: ACCTTGTATGTAGAAGTGCGGTGCTCTGTCTACGCAGGATAAATGAATGTTTCTAGTTCGCTGACTTAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR TCA 72 bp | TACCACAGAGAACATACATATCAAAGGCCAGCAAAGTaGGCAAGCTATTCACACAAACTCAGGAGGCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: YHREHTYQRPAK*ASYSHKLRRHY Trigger: ATAATGCCTCCTGAGTTTGTGTGAATAGCTTGCTCACTTTGCTGGCCTTTGATATGTATGTTCTCTGTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACCGTCAGTCATCAGCTCTTGGGTTAGTTCTGAAATACAAAATCACCTTTGGGCCTTTGTAAGGAAGTaGGAGACATTGCCTAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LPSVISSWVSSEIQNHLWAFVRK*ETLPRI Trigger: AATTCTAGGCAATGTCTCCAACTTCCTTACAAAGGC...CCAAAGGTGATTTTGTATTTCAGAACTAACCCAAGAGCTGATGACTGACGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR GCA 72 bp | ATGTTATCTAAGTCAGAGACTTGTCAAAATTCTCACTaGAGTCCTGGCTTGTATAAAACATCCACGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: MLSKSETCQNSH*SPGLYKTSTKT Trigger: TGTCTTCGTGGATGTTTTATACAAGCCAGGACTGCAGTGAGAATTTTGACAAGTCTCTGACTTAGATAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGTGTCTCATGTGTTTTGAGCACATCTGTAACAAAAGCTAGTTCTAGACTTTCTACATTTTTGTTTTaGCAGCTCTCTCACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSVSCVLSTSVTKASSRLSTFLF*QLSHQN Trigger: GTTCTGGTGAGAGAGCTGCAAAAACAAAAATGTAGA...AAGTCTAGAACTAGCTTTTGTTACAGATGTGCTCAAAACACATGAGACACTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGGTCATTCACATCATATGTCAGTCTACATACAAATACACAGCTTGTCAGCAACTTAGTCAACACTaGAAGGAAAAGGAGTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: YKVIHIICQSTYKYTACQQLSQH*KEKELH Trigger: ATGTAACTCCTTTTCCTTCAAGTGTTGACTAAGTTG...CTGACAAGCTGTGTATTTGTATGTAGACTGACATATGATGTGAATGACCTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCACACTCGAAGCGGACCGCCCAGTCCCTaGTGGAGGAGGGCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQKRGASKGHVRGLHTRSGPPSP*WRRARG Trigger: CCCTCGGGCCCTCCTCCACCAGGGACTGGGCGGTCC...GCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | CATGTCCGTGGGCTGCACACTCGAAGCACACCCAGCCTGCGGACTTCCATGGTAGCTCCGGAGTCTCTCTaGCAAGGCACCCTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVRGLHTRSTPSLRTSMVAPESL*QGTLSL Trigger: AAGGGACAGGGTGCCTTGTCAGAGAGACTCCGGAGC...TACCATGGAAGTCCGCAGGCTGGGTGTGCTTCGAGTGTGCAGCCCACGGACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCACACTCGAAGCACAGCTCCGGAGTCTCTCTaGCAAGGCACCCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKRGASKGHVRGLHTRSTAPESL*QGTLSQ Trigger: CTGGGACAGGGTGCCTTGTCAGAGAGACTCCGGAGC...TGTGCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212631.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGTGTCAGTCCTTCCCATTCACCTTCCACACAAGCCAGAAAGGAGCAAGACCGCCCAGTCCCTGGTaGAGGAGGGCCCGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HECQSFPFTFHTSQKGARPPSPW*RRARGS Trigger: GCTCCCTCGGGCCCTCCTCCACCAGGGACTGGGCGG...TCTTGCTCCTTTCTGGCTTGTGTGGAAGGTGAATGGGAAGGACTGACACTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCACACAAGCCAGAAAGGAGCAAGAGCCACAGCTGCCTGTGGCTTAGCCAGGCACCCTGTCCCTTaGAGGCAGCCATCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFHTSQKGARATAACGLARHPVP*RQPSQL Trigger: CAGCTGTGATGGCTGCCTCCAAGGGACAGGGTGCCT...GGCTAAGCCACAGGCAGCTGTGGCTCTTGCTCCTTTCTGGCTTGTGTGGAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCACACTCGAAGCGTCTGTGAACGTCTCTaGCGTGGTGAAGAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQKRGASKGHVRGLHTRSVCERL*RGEEGK Trigger: TTTGCCCTCTTCACCACGGCAGAGACGTTCACAGAC...GCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | CCTGATGCCCACCAACTTTCTTCCTGTTGCTGGAACACTGCACTCCTGCCTCCGGTCAGAAAACGCCAGTaGGTTTCGGACCTGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDAHQLSSCCWNTALLPPVRKRQ*VSDLVG Trigger: CCCCACCAGGTCCGAAACCCACTGGCGTTTTCTGAC...CGGAGGCAGGAGTGCAGTGTTCCAGCAACAGGAAGAAAGTTGGTGGGCATCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCACACTCGAAGCACACGTCTGTGAACGTCTCTaGCGTGGTGAAGAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRGERVKAMSVGCTLEAHVCERL*RGEEGK Trigger: TTTGCCCTCTTCACCACGGCAGAGACGTTCACAGAC...GTGTGCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCCATGTCCGTGGGCTGCACACTCGAAGCACACCCAGCCTGCGGACTTCCATCCTGTACAGGAGGCTaGATCCTTTTGTATAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAMSVGCTLEAHPACGLPSCTGG*ILLYRE Trigger: CTCCCTATACAAAAGGATCCAGCCTCCTGTACAGGA...TGGAAGTCCGCAGGCTGGGTGTGCTTCGAGTGTGCAGCCCACGGACATGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CCA 90 bp | AAGAGTCTTAAAGGCAGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCCCATCACAGCTGCAGTaGCTGCCACATTCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLKGRRGERVKAMSVGCPSQLQ*LPHSSP Trigger: GGGGCTTGAATGTGGCAGCCACTGCAGCTGTGATGG...GCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCTGCCTTTAAGACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTGCGGCCACAATGGGACCGCCCAGTCCCTaGTGGAGGAGGGCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQHHGKSAYRSKNTAATMGPPSP*WRRARG Trigger: CCCTCGGGCCCTCCTCCACCAGGGACTGGGCGGTCC...CATTGTGGCCGCAGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGTCTTAAAGGCAGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCGGCAGCCATCACAGCTaGAGTGGCTGCCACATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLKGRRGERVKAMSVGGSHHS*SGCHIQ Trigger: TTGAATGTGGCAGCCACTGCAGCTGTGATGGCTGCC...GCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCTGCCTTTAAGACTCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACACTCGAAGCACACCCAGCCTGCGGACTTCCATGGTACTAGTGACTAGCTCTCAGAAGCACTCCTaGACATCTTGGGCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHTRSTPSLRTSMVLVTSSQKHS*TSWAGC Trigger: ACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGA...GCTAGTCACTAGTACCATGGAAGTCCGCAGGCTGGGTGTGCTTCGAGTGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | TGGAGCTGTGGGGTGAGCTTGAAGAGGGCAGATGCTTaGCTTAATGGGTTCAGATGGATATGGGGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSCGVSLKRADA*LNGFRWIWGPG Trigger: GCCTGGGCCCCATATCCATCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAAGCTCACCCCACAGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | CATCCACGAAGACATGGAGTGAGCATGAGTGTCAGTCCTTCCCATTCACCTTCCGGGTTTCGGACCTGGTaGGGCTCCCATGACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPRRHGVSMSVSPSHSPSGFRTW*GSHDFT Trigger: TGTGAAGTCATGGGAGCCCCACCAGGTCCGAAACCC...GGAAGGTGAATGGGAAGGACTGACACTCATGCTCACTCCATGTCTTCGTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | TCGGCCACAGCGCTGGTCCCTGAAGGAGAAACACTCTaGCCAAGCCCTTCTGAGATACTCACAATTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SATALVPEGETL*PSPSEILTILP Trigger: TGGCAGAATTGTGAGTATCTCAGAAGGGCTTGGCAAGAGTGTTTCTCCTTCAGGGACCAGCGCTGTGGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGTCCTGTACAGGAGGCTaGATCCTTTTGTATAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQLMEQSPSACLHSSVPESCTGG*ILLYRE Trigger: CTCCCTATACAAAAGGATCCAGCCTCCTGTACAGGA...CTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCTGCGGACTTCCATGGTACTAGTGACTAGCTCTTTAAGGCAGAGGAGATCTCAGAAGCACTCCTaGACATCTTGGGCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTSMVLVTSSLRQRRSQKHS*TSWAGC Trigger: ACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGA...TCTCCTCTGCCTTAAAGAGCTAGTCACTAGTACCATGGAAGTCCGCAGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
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| 3UTR CAA 72 bp | TCATCCTGGCTACACCCAGCTGACACGTTGGTATGTTaGAAGGGTGTCACTTCTCTTGTCTGGAGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSWLHPADTLVC*KGVTSLVWSCG Trigger: CCCACAGCTCCAGACAAGAGAAGTGACACCCTTCAAACATACCAACGTGTCAGCTGGGTGTAGCCAGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR GCA 90 bp | AGCATGTCTGAGGAGTGCTTCAAACTGGGTTTTGGCATGGCTGAGTACAAACTCCACAGCTGCAGTGGCTaGCACATTCAAGCCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMSEECFKLGFGMAEYKLHSCSG*HIQAPL Trigger: AAGCGGGGCTTGAATGTGGCAGCCACTGCAGCTGTG...GAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR GCA 90 bp | CTATCAGAGGAGAGGGCAGCTCCCTCAACGCAATGTTATCTAAGTCAGAGACTTCACAGCTGCAGTGGCTaGCACATTCAAGCCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSEERAAPSTQCYLSQRLHSCSG*HIQAPL Trigger: AAGCGGGGCTTGAATGTGGCAGCCACTGCAGCTGTG...AAGTCTCTGACTTAGATAACATTGCGTTGAGGGAGCTGCCCTCTCCTCTGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR CCA 90 bp | TATGCAACAAACAAATTACAAATGTACATCTCAGCAGCATCATGGAAAGAGTGCCCGCCCAGTCCCTGGTaGAGGAGGGCCCGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YATNKLQMYISAASWKECPPSPW*RRARGS Trigger: GCTCCCTCGGGCCCTCCTCCACCAGGGACTGGGCGG...GCACTCTTTCCATGATGCTGCTGAGATGTACATTTGTAATTTGTTTGTTGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTGCGTAGACAGAGCACCGCACTTCTACATACAAGGTCATTCACATCATATGCTCCGGAGTCTCTCTaGCAAGGCACCCTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILRRQSTALLHTRSFTSYAPESL*QGTLSL Trigger: AAGGGACAGGGTGCCTTGTCAGAGAGACTCCGGAGC...ATATGATGTGAATGACCTTGTATGTAGAAGTGCGGTGCTCTGTCTACGCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCTGCGGACTTCCATGGTACTAGTGACTAGCTCTTTAAGGCAGAGGAGATTCAGTGGCCGAGGATaGGGTACTTTTCTTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTSMVLVTSSLRQRRFSGRG*GTFLPE Trigger: TTCAGGAAGAAAAGTACCTCATCCTCGGCCACTGAA...TCTCCTCTGCCTTAAAGAGCTAGTCACTAGTACCATGGAAGTCCGCAGGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | CGAAGCACACCCAGCCTGCGGACTTCCATGGTACTAGTGACTAGCTCTTTAAGGTTCAGTGGCCGAGGATaGGGTACTTTTCTTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSTPSLRTSMVLVTSSLRFSGRG*GTFLPE Trigger: TTCAGGAAGAAAAGTACCTCATCCTCGGCCACTGAA...CCTTAAAGAGCTAGTCACTAGTACCATGGAAGTCCGCAGGCTGGGTGTGCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212631.2 ENSMUST00000212792.2 |
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| CDS-3UTR CCA 90 bp | AAATGTACATCTCAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTCCGCCCAGTCCCTGGTaGAGGAGGGCCCGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCTSQQHHGKSAYRSKNTPPSPW*RRARGS Trigger: GCTCCCTCGGGCCCTCCTCCACCAGGGACTGGGCGG...AGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTGAGATGTACATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
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| CDS-3UTR CCA 90 bp | AAATGTACATCTCAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTGGACCGCCCAGTCCCTaGTGGAGGAGGGCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCTSQQHHGKSAYRSKNTGPPSP*WRRARG Trigger: CCCTCGGGCCCTCCTCCACCAGGGACTGGGCGGTCC...AGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTGAGATGTACATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | GGTGTCACTTCTCTTGTCTGGAGCTGTGGGGTGAGCTaGAAGAGGGCAGATGCTTTGCTTAATGGGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTSLVWSCGVS*KRADALLNGFR Trigger: TCTGAACCCATTAAGCAAAGCATCTGCCCTCTTCAAGCTCACCCCACAGCTCCAGACAAGAGAAGTGACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR TCA 90 bp | CATCTCAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTGCGGCCACTGGTGGGGCTCCCATaGCTTCACACCACCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSIMERVLIDLKTLRPLVGLP*LHTTLI Trigger: AATGAGGGTGGTGTGAAGTCATGGGAGCCCCACCAG...TGGCCGCAGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTGAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTGCGGACTTCCATGGTACTAGTGACTAGCTCTTTAAGGCAGAGGAGACCTTATACTTGTACATaGACTCCAACAGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLRTSMVLVTSSLRQRRPYTCT*TPTGPP Trigger: AGGAGGACCTGTTGGAGTTCATGTACAAGTATAAGG...TCTCCTCTGCCTTAAAGAGCTAGTCACTAGTACCATGGAAGTCCGCAGGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS-3UTR CCA 90 bp | ATCCTGCGTAGACAGAGCACCGCACTTCTACATACAAGGTCATTCACATCATATCCATCACAGCTGCAGTaGCTGCCACATTCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRRQSTALLHTRSFTSYPSQLQ*LPHSSP Trigger: GGGGCTTGAATGTGGCAGCCACTGCAGCTGTGATGG...ATATGATGTGAATGACCTTGTATGTAGAAGTGCGGTGCTCTGTCTACGCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTGCGGCCACAATGAGTGGGTTTCGGACCTaGTGGGGCTCCCATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQHHGKSAYRSKNTAATMSGFRT*WGSHDF Trigger: GAAGTCATGGGAGCCCCACCAGGTCCGAAACCCACT...CATTGTGGCCGCAGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | TGTTCCTCTTCATCCTGGCTACACCCAGCTGACACGTaGGTATGTTTGAAGGGTGTCACTTCTCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSSSWLHPADT*VCLKGVTSLVW Trigger: CCAGACAAGAGAAGTGACACCCTTCAAACATACCAACGTGTCAGCTGGGTGTAGCCAGGATGAAGAGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CCA 90 bp | TGCAACAAACAAATTACAAATGTACATCTCAGCAGCATCATGGAAAGAGTGCTTTCCGGGTCCGGCAGGTaGAGCAGCAGGTACACACCG | + |
|
Preference number: 4 (lower is better) Translates to: CNKQITNVHLSSIMERVLSGSGR*SSRYTP Trigger: CGGTGTGTACCTGCTGCTCCACCTGCCGGACCCGGA...AAGCACTCTTTCCATGATGCTGCTGAGATGTACATTTGTAATTTGTTTGTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS-3UTR TCA 90 bp | CATCTCAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTGCGGCCAAGGTACTTTTCTTCCTaGAGCGGGATCGTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLSSIMERVLIDLKTLRPRYFSS*SGIVGF Trigger: GAACCCTACGATCCCGCTTCAGGAAGAAAAGTACCT...TGGCCGCAGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTGAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212631.2 ENSMUST00000212792.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCAAGAAGTAAGACAGCTGTGTTTGGCTGTACAGTGAGTGTCTTTAAGAGAGGCAGCCATCACAGCTaGAGTGGCTGCCACATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSRSKTAVFGCTVSVFKRGSHHS*SGCHIQ Trigger: TTGAATGTGGCAGCCACTGCAGCTGTGATGGCTGCC...TCTCTTAAAGACACTCACTGTACAGCCAAACACAGCTGTCTTACTTCTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTTTTGGCATGGCTGAGTACAAACTCAAGAGCCTCGATGTGTTATGACTTCCTCGCTCCTCCTCGGTaGCTTATACTTGTACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVLAWLSTNSRASMCYDFLAPPR*LILVHE Trigger: TTCATGTACAAGTATAAGGCACCGAGGAGGAGCGAG...GAAGTCATAACACATCGAGGCTCTTGAGTTTGTACTCAGCCATGCCAAAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | AATACAGCATGTCTGAGGAGTGCTTCAAACTGGGTTTaGGCATGGCTGAGTACAAACTCAAGAGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTACLRSASNWV*AWLSTNSRASM Trigger: CATCGAGGCTCTTGAGTTTGTACTCAGCCATGCCAAAACCCAGTTTGAAGCACTCCTCAGACATGCTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCAAGAAGTAAGACAGCTGTGTTTGGCTGTACAGTGAGTGTCTTTAAGAGAAGGTACTTTTCTTCCTaGAGCGGGATCGTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRSKTAVFGCTVSVFKRRYFSS*SGIVGF Trigger: GAACCCTACGATCCCGCTTCAGGAAGAAAAGTACCT...TCTCTTAAAGACACTCACTGTACAGCCAAACACAGCTGTCTTACTTCTTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | TTTTTGCAGCTCTCTCACCAGAACTTCTGGCAGCCCTaGCGAGTTCATTACATTAAGCCAAAAGCTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLQLSHQNFWQP*RVHYIKPKAVT Trigger: AGTTACAGCTTTTGGCTTAATGTAATGAACTCGCAAGGGCTGCCAGAAGTTCTGGTGAGAGAGCTGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR GCA 90 bp | TTGAGTGTCTCATGTGTTTTGAGCACATCTGTAACAAAAGCTAGTTCTAGACTTGTCTGTGAACGTCTCTaGCGTGGTGAAGAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSCVLSTSVTKASSRLVCERL*RGEEGK Trigger: TTTGCCCTCTTCACCACGGCAGAGACGTTCACAGAC...AAGTCTAGAACTAGCTTTTGTTACAGATGTGCTCAAAACACATGAGACACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | TCAGAGACTTGTCAAAATTCTCACTGCAGTCCTGGCTaGTATAAAACATCCACGAAGACATGGAGTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SETCQNSHCSPG*YKTSTKTWSEH Trigger: ATGCTCACTCCATGTCTTCGTGGATGTTTTATACAAGCCAGGACTGCAGTGAGAATTTTGACAAGTCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | CCAGAGCGGTTTGTAATTGAGCCTGTTTGCAGTCAGTaGACAGTTCTATGTGGTATACAACACTATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PERFVIEPVCSQ*TVLCGIQHYFS Trigger: AGAGAAATAGTGTTGTATACCACATAGAACTGTCAACTGACTGCAAACAGGCTCAATTACAAACCGCTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| CDS-3UTR TCA 90 bp | TGTCAAAATTCTCACTGCAGTCCTGGCTTGTATAAAACATCCACGAAGACATGGGATTTCCTTTTCTTTTaGAGACAATGTGGGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CQNSHCSPGLYKTSTKTWDFLFF*RQCGMN Trigger: GTTCATCCCACATTGTCTTCAAAAGAAAAGGAAATC...CCATGTCTTCGTGGATGTTTTATACAAGCCAGGACTGCAGTGAGAATTTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
||
| 3UTR CAA 72 bp | ATCAGGCATTATAACAAAACAGCAGAGCTTCAGCCTTaGGAATACTGCAATTTACATCCTGTAGATACACAG | + |
|
Preference number: 4 (lower is better) Translates to: IRHYNKTAELQP*EYCNLHPVDTQ Trigger: CTGTGTATCTACAGGATGTAAATTGCAGTATTCCAAAGGCTGAAGCTCTGCTGTTTTGTTATAATGCCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGATGTTTATCAGGCATTATAACAAAACAGCAGAGCTTCAGCCTTTGGAATGATTTCCTTTTCTTTTaGAGACAATGTGGGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRCLSGIITKQQSFSLWNDFLFF*RQCGMN Trigger: GTTCATCCCACATTGTCTTCAAAAGAAAAGGAAATC...ATTCCAAAGGCTGAAGCTCTGCTGTTTTGTTATAATGCCTGATAAACATCTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121469.2 |
||
| CDS CCA 90 bp | CCCGAGCTGCCGGCACTCTCAGAAGCACTCCTGGACATCTTGGGCTaGCTGTGTTTGCCGCTGGACCGCCCAGTCCCTGGTGGAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PELPALSEALLDILG*LCLPLDRPVPGGGG Trigger: CCCTCCTCCACCAGGGACTGGGCGGTCCAGCGGCAAACACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGAGTGCCGGCAGCTCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 |
||
| CDS CCA 90 bp | ACCGAGCTGCCGGCACTCTCAGAAGCACTCCTGGACATCTTGGGCTaGCTGTGTTTGCCGCTGGACCGCCCAGTCCCTGGTGGAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TELPALSEALLDILG*LCLPLDRPVPGGGG Trigger: CCCTCCTCCACCAGGGACTGGGCGGTCCAGCGGCAAACACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGAGTGCCGGCAGCTCGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| CDS CCA 90 bp | GGTTCTAGGCGGTGCCCGAGCTGCCGGCACTCTCAGAAGCACTCCTaGACATCTTGGGCTGGCTGTGTTTGCCGCTGGACCGCCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRRCPSCRHSQKHS*TSWAGCVCRWTAQS Trigger: GGACTGGGCGGTCCAGCGGCAAACACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGAGTGCCGGCAGCTCGGGCACCGCCTAGAACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212631.2 |
||
| CDS CCA 90 bp | AGCAGCAGGTACACACCGAGCTGCCGGCACTCTCAGAAGCACTCCTaGACATCTTGGGCTGGCTGTGTTTGCCGCTGGACCGCCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRYTPSCRHSQKHS*TSWAGCVCRWTAQS Trigger: GGACTGGGCGGTCCAGCGGCAAACACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGAGTGCCGGCAGCTCGGTGTGTACCTGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCACACTCGAAGCACACAAGGCACCCTGTCCCTaGGAGGCAGCCATCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: RRGERVKAMSVGCTLEAHKAPCP*EAAITA Trigger: AGCTGTGATGGCTGCCTCCAAGGGACAGGGTGCCTT...GTGTGCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCACACTCGAAGCACACGGAGGCTGGATCCTTTaGTATAGGGAGACAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RRGERVKAMSVGCTLEAHGGWIL*YRETAA Trigger: GGCTGCTGTCTCCCTATACAAAAGGATCCAGCCTCC...GTGTGCTTCGAGTGTGCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS TCA 90 bp | CCTCCAGGGGCAACTCGCTCCTCCTCGGTGCCTTATACTTGTACATaGACTCCAACAGGTCCTCCTCCTCCTCGTCAGAAAACGCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PPGATRSSSVPYTCT*TPTGPPPPRQKTPV Trigger: CACTGGCGTTTTCTGACGAGGAGGAGGAGGACCTGTTGGAGTTCATGTACAAGTATAAGGCACCGAGGAGGAGCGAGTTGCCCCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS-3UTR CAA 90 bp | ACGCACACACAGACTAGCCCTACAATTTGGCTCAGCTATCAGAGGAGAGGGCAGAAGGCACCCTGTCCCTaGGAGGCAGCCATCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: THTQTSPTIWLSYQRRGQKAPCP*EAAITA Trigger: AGCTGTGATGGCTGCCTCCAAGGGACAGGGTGCCTT...CTGCCCTCTCCTCTGATAGCTGAGCCAAATTGTAGGGCTAGTCTGTGTGTGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CAA 90 bp | AAGAGTCTTAAAGGCAGAAGAGGGGAGCGAGTAAAGGCCATGTCCGTGGGCTGCGCTTCGATCTTTTGCTaGGACCAGGCAGTCATCGAT | + |
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Preference number: 5 (lower is better) Translates to: KSLKGRRGERVKAMSVGCASIFC*DQAVID Trigger: ATCGATGACTGCCTGGTCCAAGCAAAAGATCGAAGC...GCAGCCCACGGACATGGCCTTTACTCGCTCCCCTCTTCTGCCTTTAAGACTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CAA 90 bp | CAGCTGATGGAGCAGTCTCCCAGTGCATGTTTGCATAGCTCGGTACCAGAGCGGCATAGCTTCGATCTTTaGCTTGGACCAGGCAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: QLMEQSPSACLHSSVPERHSFDL*LGPGSH Trigger: ATGACTGCCTGGTCCAAGCAAAAGATCGAAGCTATG...CCGCTCTGGTACCGAGCTATGCAAACATGCACTGGGAGACTGCTCCATCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CAA 90 bp | TTGAGTGTCTCATGTGTTTTGAGCACATCTGTAACAAAAGCTAGTTCTAGACTTGGAGGCTGGATCCTTTaGTATAGGGAGACAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LSVSCVLSTSVTKASSRLGGWIL*YRETAA Trigger: GGCTGCTGTCTCCCTATACAAAAGGATCCAGCCTCC...AAGTCTAGAACTAGCTTTTGTTACAGATGTGCTCAAAACACATGAGACACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS-3UTR CAA 90 bp | AAATGTACATCTCAGCAGCATCATGGAAAGAGTGCTTATAGATCTAAAAACACTCATAGCTTCGATCTTTaGCTTGGACCAGGCAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: KCTSQQHHGKSAYRSKNTHSFDL*LGPGSH Trigger: ATGACTGCCTGGTCCAAGCAAAAGATCGAAGCTATG...AGTGTTTTTAGATCTATAAGCACTCTTTCCATGATGCTGCTGAGATGTACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS CAA 90 bp | GCGGTGCCCGAGCTGCCGGCACTCTCAGAAGCACTCCTGGACATCTaGGGCTGGCTGTGTTTGCCGCTGGACCGCCCAGTCCCTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AVPELPALSEALLDI*GWLCLPLDRPVPGG Trigger: TCCACCAGGGACTGGGCGGTCCAGCGGCAAACACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGAGTGCCGGCAGCTCGGGCACCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212631.2 |
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| CDS CAA 90 bp | GTACACACCGAGCTGCCGGCACTCTCAGAAGCACTCCTGGACATCTaGGGCTGGCTGTGTTTGCCGCTGGACCGCCCAGTCCCTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VHTELPALSEALLDI*GWLCLPLDRPVPGG Trigger: TCCACCAGGGACTGGGCGGTCCAGCGGCAAACACAGCCAGCCCAAGATGTCCAGGAGTGCTTCTGAGAGTGCCGGCAGCTCGGTGTGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS CCA 72 bp | TCACATCTCCCTCAACCACTTTCCGGGTCCGGCAGGTaGAGCAGCAGGTACACACCGAGCTGCCGGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: SHLPQPLSGSGR*SSRYTPSCRHS Trigger: AGAGTGCCGGCAGCTCGGTGTGTACCTGCTGCTCCACCTGCCGGACCCGGAAAGTGGTTGAGGGAGATGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS CAA 90 bp | GGCGGTGCCTCCAGGGGCAACTCGCTCCTCCTCGGTGCCTTATACTaGTACATGAACTCCAACAGGTCCTCCTCCTCCTCGTCAGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: GGASRGNSLLLGALY*YMNSNRSSSSSSEN Trigger: GTTTTCTGACGAGGAGGAGGAGGACCTGTTGGAGTTCATGTACAAGTATAAGGCACCGAGGAGGAGCGAGTTGCCCCTGGAGGCACCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS GCA 72 bp | AGGCGGTGCCTCCAGGGGCAACTCGCTCCTCCTCGGTaGCTTATACTTGTACATGAACTCCAACAGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRCLQGQLAPPR*LILVHELQQVL Trigger: GAGGACCTGTTGGAGTTCATGTACAAGTATAAGGCACCGAGGAGGAGCGAGTTGCCCCTGGAGGCACCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS CCA 72 bp | TCCTCGTCAGAAAACGCCAGTGGGTTTCGGACCTGGTaGGGCTCCCATGACTTCACACCACCCTCATTCACA | + |
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Preference number: 6 (lower is better) Translates to: SSSENASGFRTW*GSHDFTPPSFT Trigger: TGTGAATGAGGGTGGTGTGAAGTCATGGGAGCCCCACCAGGTCCGAAACCCACTGGCGTTTTCTGACGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS CAA 72 bp | TCCAGGGGCAACTCGCTCCTCCTCGGTGCCTTATACTaGTACATGAACTCCAACAGGTCCTCCTCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SRGNSLLLGALY*YMNSNRSSSSS Trigger: CGAGGAGGAGGAGGACCTGTTGGAGTTCATGTACAAGTATAAGGCACCGAGGAGGAGCGAGTTGCCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212792.2 |
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| CDS GCA 72 bp | CCCAAAGTGCACAAGGGCGTCATAGCTTCGATCTTTTaGTTGGACCAGGCAGTCATCGATTTCCTTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PKVHKGVIASIF*LDQAVIDFLFF Trigger: AAAGAAAAGGAAATCGATGACTGCCTGGTCCAAGCAAAAGATCGAAGCTATGACGCCCTTGTGCACTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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| CDS CAA 72 bp | TCCCAAAGTGCACAAGGGCGTCATAGCTTCGATCTTTaGCTTGGACCAGGCAGTCATCGATTTCCTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SQSAQGRHSFDL*LGPGSHRFPFL Trigger: AAGAAAAGGAAATCGATGACTGCCTGGTCCAAGCAAAAGATCGAAGCTATGACGCCCTTGTGCACTTTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121469.2 ENSMUST00000212792.2 |
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