RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RECQL4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033762

Ensembl transcript IDs: ENSMUST00000036852.9, ENSMUST00000230544.2, ENSMUST00000230724.2

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCACAGCCTCTTGGCCTTGAGTCGCCCACCATGGACAGGCAGGTaGGGAGGAGTGCAGCCACCCGTTCTGTATCCTTTCGCCGAGTGC +
Preference number: 1 (lower is better)
Translates to: GHSLLALSRPPWTGR*GGVQPPVLYPFAEC
Trigger: GCACTCGGCGAAAGGATACAGAACGGGTGGCTGCACTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAGGCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp GTGCAGCACAGCCCGAACATCTGGACGGTCCAGTCCCATCCCAAATaGTACCGTGGCCACTACCATGCGCAGGTGGCCCCGCATGAAGGC +
Preference number: 1 (lower is better)
Translates to: VQHSPNIWTVQSHPK*YRGHYHAQVAPHEG
Trigger: GCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTAGCATTTGGGATGGGACTGGACCGTCCAGATGTTCGGGCTGTGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp GCTCCTGCCCTGACTTGTGTCTTTAGGTGGCCACTTGGCCTGGCATaGAGCCAAAGGGGGACACCTGTGGGCCAGAGCTTGCAGCTGGGC +
Preference number: 1 (lower is better)
Translates to: APALTCVFRWPLGLA*SQRGTPVGQSLQLG
Trigger: GCCCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTTGGCTGCATGCCAGGCCAAGTGGCCACCTAAAGACACAAGTCAGGGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp TTAGGTGGCCACTTGGCCTGGCATGCAGCCAAAGGGGGACACCTGTaGGCCAGAGCTTGCAGCTGGGCACTGCCGCCAAGGCAATGCAGA +
Preference number: 1 (lower is better)
Translates to: LGGHLAWHAAKGGHL*ARACSWALPPRQCR
Trigger: TCTGCATTGCCTTGGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTTGGCTGCATGCCAGGCCAAGTGGCCACCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp TCCCAAATGCTACCGTGGCCACTACCATGCGCAGGTGGCCCCGCATaGAGGCCTGTTGTACTCGTCGCCGTTCCTGGCTGCTCATGCCAG +
Preference number: 1 (lower is better)
Translates to: SQMLPWPLPCAGGPA*RPVVLVAVPGCSCQ
Trigger: CTGGCATGAGCAGCCAGGAACGGCGACGAGTACAACAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTAGCATTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp GGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTGGGGGTGCATaGATAGGTGGCAATGGGCAGGCTTCCCATCACGCCCTGCACGGC +
Preference number: 1 (lower is better)
Translates to: GHVCAVPKGLHPGGA*IGGNGQASHHALHG
Trigger: GCCGTGCAGGGCGTGATGGGAAGCCTGCCCATTGCCACCTATTCATGCACCCCCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp TCCAGTCCCATCCCAAATGCTACCGTGGCCACTACCATGCGCAGGTaGCCCCGCATGAAGGCCTGTTGTACTCGTCGCCGTTCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: SSPIPNATVATTMRR*PRMKACCTRRRSWL
Trigger: CAGCCAGGAACGGCGACGAGTACAACAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTAGCATTTGGGATGGGACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp ATCACGCCCTGCACGGCCGATAGCTTGCACGTAGCTCTCGAAGCTTaGAGGCAGTCCCAGGTGCAGCACAGCCCGAACATCTGGACGGTC +
Preference number: 1 (lower is better)
Translates to: ITPCTADSLHVALEA*RQSQVQHSPNIWTV
Trigger: GACCGTCCAGATGTTCGGGCTGTGCTGCACCTGGGACTGCCTCCAAGCTTCGAGAGCTACGTGCAAGCTATCGGCCGTGCAGGGCGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp GTGCCCTGTGCTGCGCCTTTCTTTGGCTCTGGGTCCCACTTCAGCTaGTGGAGAGCCTGCCGTACAGAGGCCAACTTCCAGCCCATCGAG +
Preference number: 1 (lower is better)
Translates to: VPCAAPFFGSGSHFS*WRACRTEANFQPIE
Trigger: CTCGATGGGCTGGAAGTTGGCCTCTGTACGGCAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp GCGTGGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTGGGGGTaGATGAATAGGTGGCAATGGGCAGGCTTCCCATCACGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: AWACLRSSQRSSPWG*MNRWQWAGFPSRPA
Trigger: TGCAGGGCGTGATGGGAAGCCTGCCCATTGCCACCTATTCATGCACCCCCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CGCTGCACCAGCCTCTTCACAGCTAGGAAGTCAGTGCTGTCAGCGTaGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTGGGGGTGC +
Preference number: 1 (lower is better)
Translates to: RCTSLFTARKSVLSA*ACLRSSQRSSPWGC
Trigger: GCACCCCCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTGTGAAGAGGCTGGTGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CCCTGTGCTGCGCCTTTCTTTGGCTCTGGGTCCCACTTCAGCTGGTaGAGAGCCTGCCGTACAGAGGCCAACTTCCAGCCCATCGAGTCT +
Preference number: 1 (lower is better)
Translates to: PCAAPFFGSGSHFSW*RACRTEANFQPIES
Trigger: AGACTCGATGGGCTGGAAGTTGGCCTCTGTACGGCAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CTTCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTTGGCTCTaGGTCCCACTTCAGCTGGTGGAGAGCCTGCCGTACAGAGGCCAA +
Preference number: 1 (lower is better)
Translates to: LHKHSGALCCAFLWL*VPLQLVESLPYRGQ
Trigger: TTGGCCTCTGTACGGCAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp GGTGCTGAGCCACATCTCGAGCAGTGCTTCGTGTGGCTGTGGCTGTaGGACCCAAGAAGCAGCGCACCCCCATATGCTCCCGGAGAACTT +
Preference number: 1 (lower is better)
Translates to: GAEPHLEQCFVWLWL*DPRSSAPPYAPGEL
Trigger: AAGTTCTCCGGGAGCATATGGGGGTGCGCTGCTTCTTGGGTCTCACAGCCACAGCCACACGAAGCACTGCTCGAGATGTGGCTCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp TTTGTCATCCCTGTCACCTTCCTCTTGGACGGTCAGGGTGGGGCCTaGTTGGGAACACTGGGATGCCCAGTGACCAAACTGCCCACACCG +
Preference number: 1 (lower is better)
Translates to: FVIPVTFLLDGQGGA*LGTLGCPVTKLPTP
Trigger: CGGTGTGGGCAGTTTGGTCACTGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAGAGGAAGGTGACAGGGATGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp TCTTGCCCAGGGCGGAAGGCTCGGTACCCTAGCCGCTCTAGGGCCTaGAATACTTCAGCAGGGGTTTCTGCTACTTGTCCCAAAGGTCCC +
Preference number: 1 (lower is better)
Translates to: SCPGRKARYPSRSRA*NTSAGVSATCPKGP
Trigger: GGGACCTTTGGGACAAGTAGCAGAAACCCCTGCTGAAGTATTCCAGGCCCTAGAGCGGCTAGGGTACCGAGCCTTCCGCCCTGGGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CCGCACCCCACCAAGGCCTCTGGGGACACGATCAGCACGTGCACCTaGGCTGCCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTTG +
Preference number: 1 (lower is better)
Translates to: PHPTKASGDTISTCT*AARTFFKTDSRCFL
Trigger: CAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCCTTGGTGGGGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CTGTCAGCGTGGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTaGGGGTGCATGAATAGGTGGCAATGGGCAGGCTTCCCATCACGC +
Preference number: 1 (lower is better)
Translates to: LSAWACLRSSQRSSP*GCMNRWQWAGFPSR
Trigger: GCGTGATGGGAAGCCTGCCCATTGCCACCTATTCATGCACCCCCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp ATGTCCAGAGCCTGTACTGTAGACTGCACTGGGAGTGCCCGCTCATaGCCCAGGCAGGCCTGGCCCAGTACAGGGTATGTTTGTTGGCCA +
Preference number: 1 (lower is better)
Translates to: MSRACTVDCTGSARS*PRQAWPSTGYVCWP
Trigger: TGGCCAACAAACATACCCTGTACTGGGCCAGGCCTGCCTGGGCCATGAGCGGGCACTCCCAGTGCAGTCTACAGTACAGGCTCTGGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp TTGGCTGACCCGCTGAGCTCAAACTCGCCAGCTATGCCAAGGTGCTaGGCCACATCTCGAGCAGTGCTTCGTGTGGCTGTGGCTGTGAGA +
Preference number: 1 (lower is better)
Translates to: LADPLSSNSPAMPRC*ATSRAVLRVAVAVR
Trigger: TCTCACAGCCACAGCCACACGAAGCACTGCTCGAGATGTGGCTCAGCACCTTGGCATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp TGGACACGGAGAGGTGCAGATTGGCAGGGATGTTGGCTGACCCGCTaGGCTCAAACTCGCCAGCTATGCCAAGGTGCTGAGCCACATCTC +
Preference number: 1 (lower is better)
Translates to: WTRRGADWQGCWLTR*AQTRQLCQGAEPHL
Trigger: GAGATGTGGCTCAGCACCTTGGCATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp CATCTGTCAGGTCCCCGCGACTGTGCAGGTGAAAGGCCAACTCGCTaGACTTCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTTG +
Preference number: 1 (lower is better)
Translates to: HLSGPRDCAGERPTR*TSQALRCPVLRLSL
Trigger: CAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGAAGTTCAGCGAGTTGGCCTTTCACCTGCACAGTCGCGGGGACCTGACAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp GCATGGACTCGCAATGCCATGGAAGATGCGGGCCACAGCCCTTCCTaGAAACCTTTCTTCTGGCCTCAGGGACAGGAGCTGGCGGACATC +
Preference number: 1 (lower is better)
Translates to: AWTRNAMEDAGHSPS*KPFFWPQGQELADI
Trigger: GATGTCCGCCAGCTCCTGTCCCTGAGGCCAGAAGAAAGGTTTTCAGGAAGGGCTGTGGCCCGCATCTTCCATGGCATTGCGAGTCCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp CGGCCTCTCAGCAGGAGCTCTTCTGTAGCTAGGTGCATCAGGGCATaGAAGTCCAGGTGTAGGTACTTCCTCCAGAAGCGCCGGTCCAGC +
Preference number: 1 (lower is better)
Translates to: RPLSRSSSVARCIRA*KSRCRYFLQKRRSS
Trigger: GCTGGACCGGCGCTTCTGGAGGAAGTACCTACACCTGGACTTTCATGCCCTGATGCACCTAGCTACAGAAGAGCTCCTGCTGAGAGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp GCCGGTCCAGCCCATACACCTGGGCTGGGTAGCATGGACTCGCAATaGCATGGAAGATGCGGGCCACAGCCCTTCCTGAAAACCTTTCTT +
Preference number: 1 (lower is better)
Translates to: AGPAHTPGLGSMDSQ*HGRCGPQPFLKTFL
Trigger: AAGAAAGGTTTTCAGGAAGGGCTGTGGCCCGCATCTTCCATGGCATTGCGAGTCCATGCTACCCAGCCCAGGTGTATGGGCTGGACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CCCCTTGCAGCAATGTCACCAGAGCCTGGTCTGAGTCTCTATCCATaGACACGGAGAGGTGCAGATTGGCAGGGATGTTGGCTGACCCGC +
Preference number: 1 (lower is better)
Translates to: PLAAMSPEPGLSLYP*TRRGADWQGCWLTR
Trigger: GCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTGACATTGCTGCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp ACTGTAGACTGCACTGGGAGTGCCCGCTCATGGCCCAGGCAGGCCTaGCCCAGTACAGGGTATGTTTGTTGGCCACTGTGCTCTTTGACT +
Preference number: 1 (lower is better)
Translates to: TVDCTGSARSWPRQA*PSTGYVCWPLCSLT
Trigger: AGTCAAAGAGCACAGTGGCCAACAAACATACCCTGTACTGGGCCAGGCCTGCCTGGGCCATGAGCGGGCACTCCCAGTGCAGTCTACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp GGTCCACAACTGGGAAAGGCCACACTTCGAAAGGCCTTGGACATTTaGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTGCACACGG +
Preference number: 1 (lower is better)
Translates to: GPQLGKATLRKALDI*CRWARALCSRACTR
Trigger: CCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGCCTTTCCCAGTTGTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp TCTATCCATGGACACGGAGAGGTGCAGATTGGCAGGGATGTTGGCTaGCCCGCTGAGCTCAAACTCGCCAGCTATGCCAAGGTGCTGAGC +
Preference number: 1 (lower is better)
Translates to: SIHGHGEVQIGRDVG*PAELKLASYAKVLS
Trigger: GCTCAGCACCTTGGCATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp CCCCACCAAGGCCTCTGGGGACACGATCAGCACGTGCACCTGGGCTaGCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTTGGTCAT +
Preference number: 1 (lower is better)
Translates to: PHQGLWGHDQHVHLG*PYLLQDRLSLFLGH
Trigger: ATGACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCCTTGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp GTGGGAACACACGCTGCACCAGCCTCTTCACAGCTAGGAAGTCAGTaGTGTCAGCGTGGGCATGTCTGCGCAGTTCCCAAAGGTCTTCAC +
Preference number: 1 (lower is better)
Translates to: VGTHAAPASSQLGSQ*CQRGHVCAVPKGLH
Trigger: GTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTGTGAAGAGGCTGGTGCAGCGTGTGTTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp CATACACCTGGGCTGGGTAGCATGGACTCGCAATGCCATGGAAGATaGGGGCCACAGCCCTTCCTGAAAACCTTTCTTCTGGCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: HTPGLGSMDSQCHGR*GPQPFLKTFLLASG
Trigger: CCCTGAGGCCAGAAGAAAGGTTTTCAGGAAGGGCTGTGGCCCGCATCTTCCATGGCATTGCGAGTCCATGCTACCCAGCCCAGGTGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp ATCTGGTCCTTTTCCTCATCTGTCAGGTCCCCGCGACTGTGCAGGTaGAAGGCCAACTCGCTGAACTTCACAAGCACTCCGGTGCCCTGT +
Preference number: 1 (lower is better)
Translates to: IWSFSSSVRSPRLCR*KANSLNFTSTPVPC
Trigger: ACAGGGCACCGGAGTGCTTGTGAAGTTCAGCGAGTTGGCCTTTCACCTGCACAGTCGCGGGGACCTGACAGATGAGGAAAAGGACCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CCCAGTGACCAAACTGCCCACACCGGAAACAAGTGTCCTTGTCTGTaGCCCTGGGTCCACTTCCCCCAAACGCAGCTTGTTTCTTCTTCC +
Preference number: 1 (lower is better)
Translates to: PSDQTAHTGNKCPCL*PWVHFPQTQLVSSS
Trigger: GGAAGAAGAAACAAGCTGCGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGGACACTTGTTTCCGGTGTGGGCAGTTTGGTCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CTGGGAAAGGCCACACTTCGAAAGGCCTTGGACATTTGGTGTAGGTaGGCCAGGGCCTTGTGTTCACGAGCCTGCACACGGTTGTACAGA +
Preference number: 1 (lower is better)
Translates to: LGKATLRKALDIWCR*ARALCSRACTRLYR
Trigger: TCTGTACAACCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGCCTTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp GGTACGAAAACGGTCCCCTTGCAGCAATGTCACCAGAGCCTGGTCTaGGTCTCTATCCATGGACACGGAGAGGTGCAGATTGGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: GTKTVPLQQCHQSLV*VSIHGHGEVQIGRD
Trigger: ATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTGACATTGCTGCAAGGGGACCGTTTTCGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp TCCAGGGTACGAAAACGGTCCCCTTGCAGCAATGTCACCAGAGCCTaGTCTGAGTCTCTATCCATGGACACGGAGAGGTGCAGATTGGCA +
Preference number: 1 (lower is better)
Translates to: SRVRKRSPCSNVTRA*SESLSMDTERCRLA
Trigger: TGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTGACATTGCTGCAAGGGGACCGTTTTCGTACCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp TTCTTATCCCCTTCCTGCAGCCAGAAGGTTTTGCCTGACAGTCAGTaGTGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTA +
Preference number: 1 (lower is better)
Translates to: FLSPSCSQKVLPDSQ*WPHHGLGEPDTLGV
Trigger: TACTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAGGCAAAACCTTCTGGCTGCAGGAAGGGGATAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
3UTR GCA 90 bp CAGCAGGCTGTGTTTCCTCACCTGCAGAGTGGTGACAGGAAGCAGTaGCTGTCCTCTGTGCTACTTCTTCCAAGGTGGAAATGGGCTGTT +
Preference number: 1 (lower is better)
Translates to: QQAVFPHLQSGDRKQ*LSSVLLLPRWKWAV
Trigger: AACAGCCCATTTCCACCTTGGAAGAAGTAGCACAGAGGACAGGCACTGCTTCCTGTCACCACTCTGCAGGTGAGGAAACACAGCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp AGGAAGCAGTGCCTGTCCTCTGTGCTACTTCTTCCAAGGTGGAAATaGGCTGTTTGTCATCCCTGTCACCTTCCTCTTGGACGGTCAGGG +
Preference number: 1 (lower is better)
Translates to: RKQCLSSVLLLPRWK*AVCHPCHLPLGRSG
Trigger: CCCTGACCGTCCAAGAGGAAGGTGACAGGGATGACAAACAGCCCATTTCCACCTTGGAAGAAGTAGCACAGAGGACAGGCACTGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp CCTGGGCTGCCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTTaGTCATTCCTGAGTGGAGGCAGGCTGCCTTCAGACATGAAGGCA +
Preference number: 1 (lower is better)
Translates to: PGLPVPSSRQTLVVS*SFLSGGRLPSDMKA
Trigger: TGCCTTCATGTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp GCGTATTTGGTCCTCCCAGTCCTGAAGCTGAGTCTGCCCAGGTTTTaGACCCTGAGTGTCCGTCATAGTTTCTTCCTCCTCCTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: AYLVLPVLKLSLPRF*TLSVRHSFFLLLLF
Trigger: GAAGAGGAGGAGGAGGAAGAAACTATGACGGACACTCAGGGTCCAAAACCTGGGCAGACTCAGCTTCAGGACTGGGAGGACCAAATACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp GACCAAACTGCCCACACCGGAAACAAGTGTCCTTGTCTGTGGCCCTaGGTCCACTTCCCCCAAACGCAGCTTGTTTCTTCTTCCACTTTT +
Preference number: 1 (lower is better)
Translates to: DQTAHTGNKCPCLWP*VHFPQTQLVSSSTF
Trigger: AAAAGTGGAAGAAGAAACAAGCTGCGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGGACACTTGTTTCCGGTGTGGGCAGTTTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 90 bp TTGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTaGACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: LDIWCRWARALCSRA*TRLYRKSQIWSFSS
Trigger: TGAGGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 90 bp ACCTTCTTCAAGACAGACTCTCGTTGTTTCTTGGTCATTCCTGAGTaGAGGCAGGCTGCCTTCAGACATGAAGGCAGATCGGACACCTGG +
Preference number: 1 (lower is better)
Translates to: TFFKTDSRCFLVIPE*RQAAFRHEGRSDTW
Trigger: CCAGGTGTCCGATCTGCCTTCATGTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 90 bp AGCCACCCGTTCTGTATCCTTTCGCCGAGTGCAGTAAATGATAACTaGATCCAGGGTACGAAAACGGTCCCCTTGCAGCAATGTCACCAG +
Preference number: 1 (lower is better)
Translates to: SHPFCILSPSAVNDN*IQGTKTVPLQQCHQ
Trigger: CTGGTGACATTGCTGCAAGGGGACCGTTTTCGTACCCTGGATTCAGTTATCATTTACTGCACTCGGCGAAAGGATACAGAACGGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp TACCGTGGCCACTACCATGCGCAGGTGGCCCCGCATGAAGGCCTGTaGTACTCGTCGCCGTTCCTGGCTGCTCATGCCAGCATGGTAGGC +
Preference number: 2 (lower is better)
Translates to: YRGHYHAQVAPHEGL*YSSPFLAAHASMVG
Trigger: GCCTACCATGCTGGCATGAGCAGCCAGGAACGGCGACGAGTACAACAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp GTGGCAATGGGCAGGCTTCCCATCACGCCCTGCACGGCCGATAGCTaGCACGTAGCTCTCGAAGCTTGGAGGCAGTCCCAGGTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: VAMGRLPITPCTADS*HVALEAWRQSQVQH
Trigger: GTGCTGCACCTGGGACTGCCTCCAAGCTTCGAGAGCTACGTGCAAGCTATCGGCCGTGCAGGGCGTGATGGGAAGCCTGCCCATTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp CCCAAATGCTACCGTGGCCACTACCATGCGCAGGTGGCCCCGCATGAAGGCCTGGTGTGGCTGTGGCTGTaGGACCCAAGAAGCAGCGCA +
Preference number: 2 (lower is better)
Translates to: PKCYRGHYHAQVAPHEGLVWLWL*DPRSSA
Trigger: TGCGCTGCTTCTTGGGTCTCACAGCCACAGCCACAC...CAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTAGCATTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp CTCTTGGCCTTGAGTCGCCCACCATGGACAGGCAGGTGCGGAGGAGTGCAGCCACTGGTCATCCATGAGTaGCAGGAGAGGCGAGACCAC +
Preference number: 2 (lower is better)
Translates to: LLALSRPPWTGRCGGVQPLVIHE*QERRDH
Trigger: GTGGTCTCGCCTCTCCTGTCACTCATGGATGACCAG...TGGCTGCACTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp GGCATGCAGCCAAAGGGGGACACCTGTGGGCCAGAGCTTGCAGCTGGGCACTGCCAGCGTGGGCATGTCTaGGCAGTTCCCAAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: GMQPKGDTCGPELAAGHCQRGHV*AVPKGL
Trigger: AAGACCTTTGGGAACTGCGCAGACATGCCCACGCTG...GCAGTGCCCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTTGGCTGCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp GGCATGCAGCCAAAGGGGGACACCTGTGGGCCAGAGCTTGCAGCTGGGCACTGCCCTCAGGTGAGGACTTaGAAACAGGTCTCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GMQPKGDTCGPELAAGHCPQVRT*KQVSGC
Trigger: GCAGCCAGAGACCTGTTTCCAAGTCCTCACCTGAGG...GCAGTGCCCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTTGGCTGCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp GTCATCCCTGTCACCTTCCTCTTGGACGGTCAGGGTGGGGCCTGGTaGGGAACACTGGGATGCCCAGTGACCAAACTGCCCACACCGGAA +
Preference number: 2 (lower is better)
Translates to: VIPVTFLLDGQGGAW*GTLGCPVTKLPTPE
Trigger: TTCCGGTGTGGGCAGTTTGGTCACTGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAGAGGAAGGTGACAGGGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp CAGCTATGCCAAGGTGCTGAGCCACATCTCGAGCAGTGCTTCGTGTGGCTGTGGGACACGATCAGCACGTaGACCTGGGCTGCCCGTACC +
Preference number: 2 (lower is better)
Translates to: QLCQGAEPHLEQCFVWLWDTIST*TWAART
Trigger: GGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTC...CCACAGCCACACGAAGCACTGCTCGAGATGTGGCTCAGCACCTTGGCATAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp CCCAAATGCTACCGTGGCCACTACCATGCGCAGGTGGCCCCGCATGAAGGCCTGCGAAAACGGTCCCCTTaGAGCAATGTCACCAGAGCC +
Preference number: 2 (lower is better)
Translates to: PKCYRGHYHAQVAPHEGLRKRSP*SNVTRA
Trigger: GGCTCTGGTGACATTGCTGCAAGGGGACCGTTTTCG...CAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTAGCATTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTCGCTGAACTTCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTTGGCTCGGTCAGGGTGGGGCCTaGTTGGGAACACTGGGATGC +
Preference number: 2 (lower is better)
Translates to: LAELHKHSGALCCAFLWLGQGGA*LGTLGC
Trigger: GCATCCCAGTGTTCCCAACCAGGCCCCACCCTGACC...GAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGAAGTTCAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp TTCTTCTGGCCTCAGGGACAGGAGCTGGCGGACATCCCGGCGTATTaGGTCCTCCCAGTCCTGAAGCTGAGTCTGCCCAGGTTTTGGACC +
Preference number: 2 (lower is better)
Translates to: FFWPQGQELADIPAY*VLPVLKLSLPRFWT
Trigger: GGTCCAAAACCTGGGCAGACTCAGCTTCAGGACTGGGAGGACCAAATACGCCGGGATGTCCGCCAGCTCCTGTCCCTGAGGCCAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp ATGATTGCACGCTCTTGCCCAGGGCGGAAGGCTCGGTACCCTAGCCGCTCTAGGTTGGGAACACTGGGATaGCCAGTGACCAAACTGCCC +
Preference number: 2 (lower is better)
Translates to: MIARSCPGRKARYPSRSRLGTLG*PVTKLP
Trigger: GGGCAGTTTGGTCACTGGGCATCCCAGTGTTCCCAA...CCTAGAGCGGCTAGGGTACCGAGCCTTCCGCCCTGGGCAAGAGCGTGCAATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp TTCCTGGCTGCTCATGCCAGCATGGTAGGCTTCAGCTATAGCCTCGGGGCCACACCTTGTCTGTGGCCCTaGGTCCACTTCCCCCAAACG +
Preference number: 2 (lower is better)
Translates to: FLAAHASMVGFSYSLGATPCLWP*VHFPQT
Trigger: CGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGG...TGTGGCCCCGAGGCTATAGCTGAAGCCTACCATGCTGGCATGAGCAGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CAGCTATGCCAAGGTGCTGAGCCACATCTCGAGCAGTGCTTCGTGTGGCTGTGGCTTGGACGGTCAGGGTaGGGCCTGGTTGGGAACACT +
Preference number: 2 (lower is better)
Translates to: QLCQGAEPHLEQCFVWLWLGRSG*GLVGNT
Trigger: AGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAG...CCACAGCCACACGAAGCACTGCTCGAGATGTGGCTCAGCACCTTGGCATAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTGTGCTGCGCCTTTCTTTGGCTCTGGGTCCCACTTCAGCTGGTGGAGAGCCTGTACTGTAGACTGCACTaGGAGTGCCCGCTCATGGCC +
Preference number: 2 (lower is better)
Translates to: LCCAFLWLWVPLQLVESLYCRLH*ECPLMA
Trigger: GGCCATGAGCGGGCACTCCCAGTGCAGTCTACAGTA...CAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp CAAGGCCTCTGGGGACACGATCAGCACGTGCACCTGGGCTGCCCGTACCTTCTTCTGTGTTTCCTCACCTaGAGAGTGGTGACAGGAAGC +
Preference number: 2 (lower is better)
Translates to: QGLWGHDQHVHLGCPYLLLCFLT*RVVTGS
Trigger: GCTTCCTGTCACCACTCTGCAGGTGAGGAAACACAG...AAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp AGGCCACACTTCGAAAGGCCTTGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTCCACTTGGCCTGGCATaGAGCCAAAGGGGGACACCT +
Preference number: 2 (lower is better)
Translates to: RPHFERPWTFGVGGPGPCPLGLA*SQRGTP
Trigger: AGGTGTCCCCCTTTGGCTGCATGCCAGGCCAAGTGG...ACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTCGCTGAACTTCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTTGGCTCAAGTGTCCTTGTCTGTaGCCCTGGGTCCACTTCCCC +
Preference number: 2 (lower is better)
Translates to: LAELHKHSGALCCAFLWLKCPCL*PWVHFP
Trigger: GGGGAAGTGGACCCAGGGCCACAGACAAGGACACTT...GAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGAAGTTCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp GCCTTGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTGCACAGGGGTGACATTGGGGTaGGGCAATGAGGCACCTGTA +
Preference number: 2 (lower is better)
Translates to: ALDIWCRWARALCSRACTGVTLG*GNEAPV
Trigger: TACAGGTGCCTCATTGCCCCACCCCAATGTCACCCC...TGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTGTGCTGCGCCTTTCTTTGGCTCTGGGTCCCACTTCAGCTGGTGGAGAGCCTGGGCAGATCGGACACCTaGTCATCCATGAGTGACAGG +
Preference number: 2 (lower is better)
Translates to: LCCAFLWLWVPLQLVESLGRSDT*SSMSDR
Trigger: CCTGTCACTCATGGATGACCAGGTGTCCGATCTGCC...CAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTCTTGGCCTTGAGTCGCCCACCATGGACAGGCAGGTGCGGAGGAGTGCAGCCACTGAGTCTCTATCCATaGACACGGAGAGGTGCAGAT +
Preference number: 2 (lower is better)
Translates to: LLALSRPPWTGRCGGVQPLSLYP*TRRGAD
Trigger: ATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAG...TGGCTGCACTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp GAGTCTCTATCCATGGACACGGAGAGGTGCAGATTGGCAGGGATGTaGGCTGACCCGCTGAGCTCAAACTCGCCAGCTATGCCAAGGTGC +
Preference number: 2 (lower is better)
Translates to: ESLSMDTERCRLAGM*ADPLSSNSPAMPRC
Trigger: GCACCTTGGCATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp AGAGCCTGGTCTGAGTCTCTATCCATGGACACGGAGAGGTGCAGATaGGCAGGGATGTTGGCTGACCCGCTGAGCTCAAACTCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RAWSESLSMDTERCR*AGMLADPLSSNSPA
Trigger: AGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp ATGGACAGGCAGGTGCGGAGGAGTGCAGCCACCCGTTCTGTATCCTTTCGCCGATTTCTTGGTCATTCCTaGGTGGAGGCAGGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: MDRQVRRSAATRSVSFRRFLGHS*VEAGCL
Trigger: AAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAA...TCGGCGAAAGGATACAGAACGGGTGGCTGCACTCCTCCGCACCTGCCTGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp AGGCCACACTTCGAAAGGCCTTGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGCTATGCCAAGGTGCTaGGCCACATCTCGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: RPHFERPWTFGVGGPGPCAMPRC*ATSRAV
Trigger: CACTGCTCGAGATGTGGCTCAGCACCTTGGCATAGC...ACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp GGACACGATCAGCACGTGCACCTGGGCTGCCCGTACCTTCTTCAAGACAGACTCAAGAATCCGCATGATTaGACGCTCTTGCCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: GHDQHVHLGCPYLLQDRLKNPHD*TLLPRA
Trigger: CGCCCTGGGCAAGAGCGTGCAATCATGCGGATTCTT...GAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp AAAGTCACAGATCTGGTCCTTTTCCTCATCTGTCAGGTCCCCGCGACTGTGCAGAGGGTGGGGCCTGGTTaGGAACACTGGGATGCCCAG +
Preference number: 2 (lower is better)
Translates to: KVTDLVLFLICQVPATVQRVGPG*EHWDAQ
Trigger: CTGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCT...CTGCACAGTCGCGGGGACCTGACAGATGAGGAAAAGGACCAGATCTGTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp CCTGGGTCCACTTCCCCCAAACGCAGCTTGTTTCTTCTTCCACTTTaGCTTCCATACCTGCTTACGGAGAAGCCTGCCCCGATTGGCCCC +
Preference number: 2 (lower is better)
Translates to: PGSTSPKRSLFLLPL*LPYLLTEKPAPIGP
Trigger: GGGGCCAATCGGGGCAGGCTTCTCCGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAAACAAGCTGCGTTTGGGGGAAGTGGACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp CTCGCTGAACTTCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTTGGCTCGCAGCCAGAAGGTTTTaGCTGACAGTCAGTGATGGC +
Preference number: 2 (lower is better)
Translates to: LAELHKHSGALCCAFLWLAARRF*LTVSDG
Trigger: GCCATCACTGACTGTCAGGCAAAACCTTCTGGCTGC...GAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGAAGTTCAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp TGCACCTGGGCTGCCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTTGGTCATGATTGCACGCTCTTaGCCAGGGCGGAAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: CTWAARTFFKTDSRCFLVMIARS*PGRKAR
Trigger: CCGAGCCTTCCGCCCTGGGCAAGAGCGTGCAATCAT...GACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp ATGCCTCAATCATGTGGCACCCTCCCATGTAAGGTGGTCATCGGCCTCTCAGCAGGTGGGAACACACGCTaGACCAGCCTCTTCACAGCT +
Preference number: 2 (lower is better)
Translates to: MPQSCGTLPCKVVIGLSAGGNTR*TSLFTA
Trigger: AGCTGTGAAGAGGCTGGTGCAGCGTGTGTTCCCACC...TGCTGAGAGGCCGATGACCACCTTACATGGGAGGGTGCCACATGATTGAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp GAGAGGTGGCACCAGCCTCTCCCTGTAACCCAAATCCTGCTTGGCTCCTTACCCATGAATAGGTGGCAATaGGCAGGCTTCCCATCACGC +
Preference number: 2 (lower is better)
Translates to: ERWHQPLPVTQILLGSLPMNRWQ*AGFPSR
Trigger: GCGTGATGGGAAGCCTGCCCATTGCCACCTATTCAT...GGGTAAGGAGCCAAGCAGGATTTGGGTTACAGGGAGAGGCTGGTGCCACCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTGTGCTGCGCCTTTCTTTGGCTCTGGGTCCCACTTCAGCTGGTGGAGAGCCTGACTCTCGTTGTTTCTTaGTCATTCCTGAGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LCCAFLWLWVPLQLVESLTLVVS*SFLSGG
Trigger: GCCTCCACTCAGGAATGACCAAGAAACAACGAGAGT...CAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp ACCTGGGCTGCCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTaGGTCATTCCTGAGTGGAGGCAGGCTGCCTTCAGACATGAAGGC +
Preference number: 2 (lower is better)
Translates to: TWAARTFFKTDSRCF*VIPEWRQAAFRHEG
Trigger: GCCTTCATGTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp TGGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTGCACACGGTaGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCATCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: WCRWARALCSRACTR*YRKSQIWSFSSSVR
Trigger: CCTGACAGATGAGGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp TTCTTGGTCATTCCTGAGTGGAGGCAGGCTGCCTTCAGACATGAAGGCAGATCGACACCTGGTCATCCATaGGTGACAGGAGAGGCGAGA +
Preference number: 2 (lower is better)
Translates to: FLVIPEWRQAAFRHEGRSTPGHP*VTGEAR
Trigger: TCTCGCCTCTCCTGTCACTCATGGATGACCAGGTGT...CGATCTGCCTTCATGTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp TGTTCACGAGCCTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCAAAGGGGGACACCTGTaGGCCAGAGCTTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: CSRACTRLYRKSQIWSFSKGGHL*ARACSW
Trigger: CCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTT...GGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp ATGCCTCAATCATGTGGCACCCTCCCATGTAAGGTGGTCATCGGCCTCTCAGCAAGTCTGCCCAGGTTTTaGACCCTGAGTGTCCGTCAT +
Preference number: 2 (lower is better)
Translates to: MPQSCGTLPCKVVIGLSASLPRF*TLSVRH
Trigger: ATGACGGACACTCAGGGTCCAAAACCTGGGCAGACT...TGCTGAGAGGCCGATGACCACCTTACATGGGAGGGTGCCACATGATTGAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp ACACTTCGAAAGGCCTTGGACATTTGGTGTAGGTGGGCCAGGGCCTaGTGTTCACGAGCCTGCACACGGTTGTACAGAAAGTCACAGATC +
Preference number: 2 (lower is better)
Translates to: TLRKALDIWCRWARA*CSRACTRLYRKSQI
Trigger: GATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp TTCTTGGTCATTCCTGAGTGGAGGCAGGCTGCCTTCAGACATGAAGGCAGATCGTTGCCTGACAGTCAGTaGTGGCCACATCATGGCCTT +
Preference number: 2 (lower is better)
Translates to: FLVIPEWRQAAFRHEGRSLPDSQ*WPHHGL
Trigger: AAGGCCATGATGTGGCCATCACTGACTGTCAGGCAA...CGATCTGCCTTCATGTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR TCA 90 bp TGTTCACGAGCCTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCGGCTGCCTTCAGACATaGAGGCAGATCGGACACCTG +
Preference number: 2 (lower is better)
Translates to: CSRACTRLYRKSQIWSFSGCLQT*RQIGHL
Trigger: CAGGTGTCCGATCTGCCTTCATGTCTGAAGGCAGCC...GGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp AAAGTCACAGATCTGGTCCTTTTCCTCATCTGTCAGGTCCCCGCGACTGTGCAGGCTCCCGGAGAACTTTaGAAACACGTAGGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: KVTDLVLFLICQVPATVQAPGEL*KHVGSR
Trigger: CCTGCTACCTACGTGTTTGCAAAGTTCTCCGGGAGC...CTGCACAGTCGCGGGGACCTGACAGATGAGGAAAAGGACCAGATCTGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp TGGTCTGAGTCTCTATCCATGGACACGGAGAGGTGCAGATTGGCAGGGATGTTGGTAGTGGCCACAGTCTaGCTTGCCTCATGCCTCAAT +
Preference number: 2 (lower is better)
Translates to: WSESLSMDTERCRLAGMLVVATV*LASCLN
Trigger: ATTGAGGCATGAGGCAAGCCAGACTGTGGCCACTAC...CAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 90 bp AGTGTCCTTGTCTGTGGCCCTGGGTCCACTTCCCCCAAACGCAGCTaGTTTCTTCTTCCACTTTTGCTTCCATACCTGCTTACGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SVLVCGPGSTSPKRS*FLLPLLLPYLLTEK
Trigger: CTTCTCCGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAAACAAGCTGCGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp TGTTCACGAGCCTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCCTGGGCATAGAGCAGTaGAGGAAGCTGGTAGCACAG +
Preference number: 2 (lower is better)
Translates to: CSRACTRLYRKSQIWSFSLGIEQ*RKLVAQ
Trigger: CTGTGCTACCAGCTTCCTGCACTGCTCTATGCCCAG...GGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR GCA 90 bp CGGTACCCTAGCCGCTCTAGGGCCTGGAATACTTCAGCAGGGGTTTCTGCTACTTTCTTCTTCCACTTTTaGTTCCATACCTGCTTACGG +
Preference number: 2 (lower is better)
Translates to: RYPSRSRAWNTSAGVSATFFFHF*FHTCLR
Trigger: CCGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAA...AGTAGCAGAAACCCCTGCTGAAGTATTCCAGGCCCTAGAGCGGCTAGGGTACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp GCCTTGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTGCACATTTTATTCTGCAGTTTaGATCTTCTTATCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: ALDIWCRWARALCSRACTFYSAV*IFLSPS
Trigger: GGAAGGGGATAAGAAGATCCAAACTGCAGAATAAAA...TGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CCA 90 bp CTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCATCTGTCAGAACCCAAATCCTGCTTaGCTCCTTACCCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LHTVVQKVTDLVLFLICQNPNPA*LLTLLC
Trigger: ACAGAGGAGGGTAAGGAGCCAAGCAGGATTTGGGTT...CTGACAGATGAGGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CGGGGCCACAGCCTCTTGGCCTTGAGTCGCCCACCATaGACAGGCAGGTGCGGAGGAGTGCAGCCACCCGTT +
Preference number: 3 (lower is better)
Translates to: RGHSLLALSRPP*TGRCGGVQPPV
Trigger: AACGGGTGGCTGCACTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAGGCTGTGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp GGGGACACCTGTGGGCCAGAGCTTGCAGCTGGGCACTaGCGCCAAGGCAATGCAGATGGCACTGGGCGTAGG +
Preference number: 3 (lower is better)
Translates to: GDTCGPELAAGH*RQGNADGTGRR
Trigger: CCTACGCCCAGTGCCATCTGCATTGCCTTGGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCACAGGTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CACTTGGCCTGGCATGCAGCCAAAGGGGGACACCTGTaGGCCAGAGCTTGCAGCTGGGCACTGCCGCCAAGG +
Preference number: 3 (lower is better)
Translates to: HLAWHAAKGGHL*ARACSWALPPR
Trigger: CCTTGGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTTGGCTGCATGCCAGGCCAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp CTACCGTGGCCACTACCATGCGCAGGTGGCCCCGCATaGAGGCCTGTTGTACTCGTCGCCGTTCCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: LPWPLPCAGGPA*RPVVLVAVPGC
Trigger: GCAGCCAGGAACGGCGACGAGTACAACAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGTGGCCACGGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp TGGGCCAGAGCTTGCAGCTGGGCACTGCCGCCAAGGCAATGCAGATGGCACTGGTGCAGGCGAAGGCAATaGGAGGCAGCTGAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: WARACSWALPPRQCRWHWCRRRQ*EAAERP
Trigger: AGGCCGCTCAGCTGCCTCCAATTGCCTTCGCCTGCA...CCAGTGCCATCTGCATTGCCTTGGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp TTCAGCTATAGCCTCGGGGCCACAGCCTCTTGGCCTTaGGTCGCCCACCATGGACAGGCAGGTGCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: FSYSLGATASWP*VAHHGQAGAEE
Trigger: CTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAGGCTGTGGCCCCGAGGCTATAGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CCAAAGGTCCCGGTGGGTAGAGGGGTGACATTGGGGTaGGGCAATGAGGCACCTGTAGCTCTGGCGCAGCAG +
Preference number: 3 (lower is better)
Translates to: PKVPVGRGVTLG*GNEAPVALAQQ
Trigger: CTGCTGCGCCAGAGCTACAGGTGCCTCATTGCCCCACCCCAATGTCACCCCTCTACCCACCGGGACCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp TGCACTGGGAGTGCCCGCTCATGGCCCAGGCAGGCCTaGCCCAGTACAGGGTATGTTTGTTGGCCACTGTGC +
Preference number: 3 (lower is better)
Translates to: CTGSARSWPRQA*PSTGYVCWPLC
Trigger: GCACAGTGGCCAACAAACATACCCTGTACTGGGCCAGGCCTGCCTGGGCCATGAGCGGGCACTCCCAGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CACTCCGGTGCCCTGTGCTGCGCCTTTCTTTGGCTCTaGGTCCCACTTCAGCTGGTGGAGAGCCTGCCGTAC +
Preference number: 3 (lower is better)
Translates to: HSGALCCAFLWL*VPLQLVESLPY
Trigger: GTACGGCAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp CACCCCACCAAGGCCTCTGGGGACACGATCAGCACGTaGACCTGGGCTGCCCGTACCTTCTTCAAGACAGAC +
Preference number: 3 (lower is better)
Translates to: HPTKASGDTIST*TWAARTFFKTD
Trigger: GTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCCTTGGTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GCCTGTACTGTAGACTGCACTGGGAGTGCCCGCTCATaGCCCAGGCAGGCCTGGCCCAGTACAGGGTATGTT +
Preference number: 3 (lower is better)
Translates to: ACTVDCTGSARS*PRQAWPSTGYV
Trigger: AACATACCCTGTACTGGGCCAGGCCTGCCTGGGCCATGAGCGGGCACTCCCAGTGCAGTCTACAGTACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CCTCCAGAAGCGCCGGTCCAGCCCATACACCTGGGCTaGGTAGCATGGACTCGCAATGCCATGGAAGATGCG +
Preference number: 3 (lower is better)
Translates to: PPEAPVQPIHLG*VAWTRNAMEDA
Trigger: CGCATCTTCCATGGCATTGCGAGTCCATGCTACCCAGCCCAGGTGTATGGGCTGGACCGGCGCTTCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp GGACACGATCAGCACGTGCACCTGGGCTGCCCGTACCTTCTTCAAGACAGACTCGGCCACATCATGGCCTaGGTGAGCCTGACACCCTCG +
Preference number: 3 (lower is better)
Translates to: GHDQHVHLGCPYLLQDRLGHIMA*VSLTPS
Trigger: CGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCC...GAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp CCACATCTCGAGCAGTGCTTCGTGTGGCTGTGGCTGTaGGACCCAAGAAGCAGCGCACCCCCATATGCTCCC +
Preference number: 3 (lower is better)
Translates to: PHLEQCFVWLWL*DPRSSAPPYAP
Trigger: GGGAGCATATGGGGGTGCGCTGCTTCTTGGGTCTCACAGCCACAGCCACACGAAGCACTGCTCGAGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp GACGGTCAGGGTGGGGCCTGGTTGGGAACACTGGGATaGCCAGTGACCAAACTGCCCACACCGGAAACAAGT +
Preference number: 3 (lower is better)
Translates to: DGQGGAWLGTLG*PVTKLPTPETS
Trigger: ACTTGTTTCCGGTGTGGGCAGTTTGGTCACTGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCTGACCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp CTCTTGGCCTTGAGTCGCCCACCATGGACAGGCAGGTaGGGAGGAGTGCAGCCACCCGTTCTGTATCCTTTC +
Preference number: 3 (lower is better)
Translates to: LLALSRPPWTGR*GGVQPPVLYPF
Trigger: GAAAGGATACAGAACGGGTGGCTGCACTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp CTTCCTCAGGTGAGGACTTGGAAACAGGTCTCTGGCTaGAGGTGCAGGGTGGGAACACACGCTGCACCAGCC +
Preference number: 3 (lower is better)
Translates to: LPQVRTWKQVSG*RCRVGTHAAPA
Trigger: GGCTGGTGCAGCGTGTGTTCCCACCCTGCACCTGCAGCCAGAGACCTGTTTCCAAGTCCTCACCTGAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GGTGAGCCTGACACCCTCGGAGTAGTGGCCACAGTCTaGCTTGCCTCATGCCTCAATCATGTGGCACCCTCC +
Preference number: 3 (lower is better)
Translates to: GEPDTLGVVATV*LASCLNHVAPS
Trigger: GGAGGGTGCCACATGATTGAGGCATGAGGCAAGCCAGACTGTGGCCACTACTCCGAGGGTGTCAGGCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
3UTR CCA 72 bp TGTCATCCCTGTCACCTTCCTCTTGGACGGTCAGGGTaGGGCCTGGTTGGGAACACTGGGATGCCCAGTGAC +
Preference number: 3 (lower is better)
Translates to: CHPCHLPLGRSG*GLVGNTGMPSD
Trigger: GTCACTGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAGAGGAAGGTGACAGGGATGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp CCGCTGAGCTCAAACTCGCCAGCTATGCCAAGGTGCTaGGCCACATCTCGAGCAGTGCTTCGTGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: PLSSNSPAMPRC*ATSRAVLRVAV
Trigger: CACAGCCACACGAAGCACTGCTCGAGATGTGGCTCAGCACCTTGGCATAGCTGGCGAGTTTGAGCTCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp GGACACGGAGAGGTGCAGATTGGCAGGGATGTTGGCTaGCCCGCTGAGCTCAAACTCGCCAGCTATGCCAAG +
Preference number: 3 (lower is better)
Translates to: GHGEVQIGRDVG*PAELKLASYAK
Trigger: CTTGGCATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp CAGCTAGGAAGTCAGTGCTGTCAGCGTGGGCATGTCTaGGCAGTTCCCAAAGGTCTTCACCCTGGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: QLGSQCCQRGHV*AVPKGLHPGGA
Trigger: TGCACCCCCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp ACCAAGGCCTCTGGGGACACGATCAGCACGTGCACCTaGGCTGCCCGTACCTTCTTCAAGACAGACTCTCGT +
Preference number: 3 (lower is better)
Translates to: TKASGDTISTCT*AARTFFKTDSR
Trigger: ACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GCCACACTTCGAAAGGCCTTGGACATTTGGTGTAGGTaGGCCAGGGCCTTGTGTTCACGAGCCTGCACACGG +
Preference number: 3 (lower is better)
Translates to: ATLRKALDIWCR*ARALCSRACTR
Trigger: CCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CCTGAAAACCTTTCTTCTGGCCTCAGGGACAGGAGCTaGCGGACATCCCGGCGTATTTGGTCCTCCCAGTCC +
Preference number: 3 (lower is better)
Translates to: PENLSSGLRDRS*RTSRRIWSSQS
Trigger: GGACTGGGAGGACCAAATACGCCGGGATGTCCGCCAGCTCCTGTCCCTGAGGCCAGAAGAAAGGTTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTGGCCACAGTCTGGCTaGCCTCATGCCTCAATCATG +
Preference number: 3 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEWPQSG*PHASIM
Trigger: CATGATTGAGGCATGAGGCAAGCCAGACTGTGGCCA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp CCGAACATCTGGACGGTCCAGTCCCATCCCAAATGCTACCGTGGCCACTACCATCGGAAACAAGTGTCCTaGTCTGTGGCCCTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: PNIWTVQSHPKCYRGHYHRKQVS*SVALGP
Trigger: TGGACCCAGGGCCACAGACAAGGACACTTGTTTCCG...ATGGTAGTGGCCACGGTAGCATTTGGGATGGGACTGGACCGTCCAGATGTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp CTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCATCTGTCAGCCTGTGGGCCAGAGCTaGCAGCTGGGCACTGCCGCC +
Preference number: 3 (lower is better)
Translates to: LHTVVQKVTDLVLFLICQPVGQS*QLGTAA
Trigger: GGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCACAGG...CTGACAGATGAGGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp AGAGGTGCAGATTGGCAGGGATGTTGGCTGACCCGCTaGGCTCAAACTCGCCAGCTATGCCAAGGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: RGADWQGCWLTR*AQTRQLCQGAE
Trigger: CTCAGCACCTTGGCATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp GGCCTCTGGGGACACGATCAGCACGTGCACCTGGGCTaGCCGTACCTTCTTCAAGACAGACTCTCGTTGTTT +
Preference number: 3 (lower is better)
Translates to: GLWGHDQHVHLG*PYLLQDRLSLF
Trigger: AAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp CACGCTGCACCAGCCTCTTCACAGCTAGGAAGTCAGTaGTGTCAGCGTGGGCATGTCTGCGCAGTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: HAAPASSQLGSQ*CQRGHVCAVPK
Trigger: TTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTGTGAAGAGGCTGGTGCAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GTGGCACCAGCCTCTCCCTGTAACCCAAATCCTGCTTaGCTCCTTACCCTCCTCTGTCATGTCCAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: VAPASPCNPNPA*LLTLLCHVQSL
Trigger: CAGGCTCTGGACATGACAGAGGAGGGTAAGGAGCCAAGCAGGATTTGGGTTACAGGGAGAGGCTGGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp CGGTACCCTAGCCGCTCTAGGGCCTGGAATACTTCAGCAGGGGTTTCTGCTACTTGGCCACAGTCTGGCTaGCCTCATGCCTCAATCATG +
Preference number: 3 (lower is better)
Translates to: RYPSRSRAWNTSAGVSATWPQSG*PHASIM
Trigger: CATGATTGAGGCATGAGGCAAGCCAGACTGTGGCCA...AGTAGCAGAAACCCCTGCTGAAGTATTCCAGGCCCTAGAGCGGCTAGGGTACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp CCTTCCTGCAGCCAGAAGGTTTTGCCTGACAGTCAGTaGTGGCCACATCATGGCCTTGGTGAGCCTGACACC +
Preference number: 3 (lower is better)
Translates to: PSCSQKVLPDSQ*WPHHGLGEPDT
Trigger: GGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAGGCAAAACCTTCTGGCTGCAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
3UTR GCA 72 bp TATGTGACCACTGAGAGAGGCAGTGGACCTCATCAATaGAGGCGAAGGCAATTGGAGGCAGCTGAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: YVTTERGSGPHQ*RRRQLEAAERP
Trigger: AGGCCGCTCAGCTGCCTCCAATTGCCTTCGCCTGCATTGATGAGGTCCACTGCCTCTCTCAGTGGTCACATA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp TGGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTaGACACGGTTGTACAGAAAGTCACAGATCTGGTCC +
Preference number: 3 (lower is better)
Translates to: WCRWARALCSRA*TRLYRKSQIWS
Trigger: GGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp GGGCTGGGTAGCATGGACTCGCAATGCCATGGAAGATaGGGGCCACAGCCCTTCCTGAAAACCTTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: GLGSMDSQCHGR*GPQPFLKTFLL
Trigger: CAGAAGAAAGGTTTTCAGGAAGGGCTGTGGCCCGCATCTTCCATGGCATTGCGAGTCCATGCTACCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GCCCACACCGGAAACAAGTGTCCTTGTCTGTGGCCCTaGGTCCACTTCCCCCAAACGCAGCTTGTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: AHTGNKCPCLWP*VHFPQTQLVSS
Trigger: AGAAGAAACAAGCTGCGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGGACACTTGTTTCCGGTGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CAAACTGCCCACACCGGAAACAAGTGTCCTTGTCTGTaGCCCTGGGTCCACTTCCCCCAAACGCAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: QTAHTGNKCPCL*PWVHFPQTQLV
Trigger: AACAAGCTGCGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGGACACTTGTTTCCGGTGTGGGCAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CGAAAACGGTCCCCTTGCAGCAATGTCACCAGAGCCTaGTCTGAGTCTCTATCCATGGACACGGAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: RKRSPCSNVTRA*SESLSMDTERC
Trigger: GCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTGACATTGCTGCAAGGGGACCGTTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp AGCCTCTTCACAGCTAGGAAGTCAGTGCTGTCAGCGTaGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCC +
Preference number: 3 (lower is better)
Translates to: SLFTARKSVLSA*ACLRSSQRSSP
Trigger: GGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTGTGAAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp ACGGTCCCCTTGCAGCAATGTCACCAGAGCCTGGTCTaGGTCTCTATCCATGGACACGGAGAGGTGCAGATT +
Preference number: 3 (lower is better)
Translates to: TVPLQQCHQSLV*VSIHGHGEVQI
Trigger: AATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTGACATTGCTGCAAGGGGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp TTTTCCTCATCTGTCAGGTCCCCGCGACTGTGCAGGTaGAAGGCCAACTCGCTGAACTTCACAAGCACTCCG +
Preference number: 3 (lower is better)
Translates to: FSSSVRSPRLCR*KANSLNFTSTP
Trigger: CGGAGTGCTTGTGAAGTTCAGCGAGTTGGCCTTTCACCTGCACAGTCGCGGGGACCTGACAGATGAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp AGAAGCAGCGCACCCCCATATGCTCCCGGAGAACTTTaGAAACACGTAGGTAGCAGGGCCGGAAGTTATGTG +
Preference number: 3 (lower is better)
Translates to: RSSAPPYAPGEL*KHVGSRAGSYV
Trigger: CACATAACTTCCGGCCCTGCTACCTACGTGTTTGCAAAGTTCTCCGGGAGCATATGGGGGTGCGCTGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GCAATGTCACCAGAGCCTGGTCTGAGTCTCTATCCATaGACACGGAGAGGTGCAGATTGGCAGGGATGTTGG +
Preference number: 3 (lower is better)
Translates to: AMSPEPGLSLYP*TRRGADWQGCW
Trigger: CCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTGACATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GTCCACAACTGGGAAAGGCCACACTTCGAAAGGCCTTaGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGTT +
Preference number: 3 (lower is better)
Translates to: VHNWERPHFERP*TFGVGGPGPCV
Trigger: AACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGCCTTTCCCAGTTGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp GTCCTCCCAGTCCTGAAGCTGAGTCTGCCCAGGTTTTaGACCCTGAGTGTCCGTCATAGTTTCTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: VLPVLKLSLPRF*TLSVRHSFFLL
Trigger: GAGGAGGAAGAAACTATGACGGACACTCAGGGTCCAAAACCTGGGCAGACTCAGCTTCAGGACTGGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp GAGAGGTGGCACCAGCCTCTCCCTGTAACCCAAATCCTGCTTGGCTCCTTACCCTCCCCCAAACGCAGCTaGTTTCTTCTTCCACTTTTG +
Preference number: 3 (lower is better)
Translates to: ERWHQPLPVTQILLGSLPSPKRS*FLLPLL
Trigger: CAAAAGTGGAAGAAGAAACAAGCTGCGTTTGGGGGA...GGGTAAGGAGCCAAGCAGGATTTGGGTTACAGGGAGAGGCTGGTGCCACCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp CTGTGCTGCGCCTTTCTTTGGCTCTGGGTCCCACTTCAGCTGGTGGAGAGCCTGTTTCTTCTTCCACTTTaGCTTCCATACCTGCTTACG +
Preference number: 3 (lower is better)
Translates to: LCCAFLWLWVPLQLVESLFLLPL*LPYLLT
Trigger: CGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAAA...CAGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp TGCAGAGTGGTGACAGGAAGCAGTGCCTGTCCTCTGTaGTACTTCTTCCAAGGTGGAAATGGGCTGTTTGTC +
Preference number: 3 (lower is better)
Translates to: CRVVTGSSACPL*YFFQGGNGLFV
Trigger: GACAAACAGCCCATTTCCACCTTGGAAGAAGTAGCACAGAGGACAGGCACTGCTTCCTGTCACCACTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp GCCTGGCCCAGTACAGGGTATGTTTGTTGGCCACTGTaGTCTTTGACTTCCTCAGGTGAGGACTTGGAAACA +
Preference number: 3 (lower is better)
Translates to: AWPSTGYVCWPL*SLTSSGEDLET
Trigger: TGTTTCCAAGTCCTCACCTGAGGAAGTCAAAGAGCACAGTGGCCAACAAACATACCCTGTACTGGGCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp CCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTTaGTCATTCCTGAGTGGAGGCAGGCTGCCTTCAGAC +
Preference number: 3 (lower is better)
Translates to: PVPSSRQTLVVS*SFLSGGRLPSD
Trigger: GTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp TGTTCACGAGCCTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCCTCAGGTGAGGACTaGGAAACAGGTCTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: CSRACTRLYRKSQIWSFSSSGED*ETGLWL
Trigger: CAGCCAGAGACCTGTTTCCAAGTCCTCACCTGAGGA...GGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp TGCCTGTCCTCTGTGCTACTTCTTCCAAGGTGGAAATaGGCTGTTTGTCATCCCTGTCACCTTCCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: CLSSVLLLPRWK*AVCHPCHLPLG
Trigger: TCCAAGAGGAAGGTGACAGGGATGACAAACAGCCCATTTCCACCTTGGAAGAAGTAGCACAGAGGACAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CCA 72 bp AAGACAGACTCTCGTTGTTTCTTGGTCATTCCTGAGTaGAGGCAGGCTGCCTTCAGACATGAAGGCAGATCG +
Preference number: 3 (lower is better)
Translates to: KTDSRCFLVIPE*RQAAFRHEGRS
Trigger: CGATCTGCCTTCATGTCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAACAACGAGAGTCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR GCA 72 bp ATGATAACTGAATCCAGGGTACGAAAACGGTCCCCTTaGAGCAATGTCACCAGAGCCTGGTCTGAGTCTCTA +
Preference number: 3 (lower is better)
Translates to: MITESRVRKRSP*SNVTRAWSESL
Trigger: TAGAGACTCAGACCAGGCTCTGGTGACATTGCTGCAAGGGGACCGTTTTCGTACCCTGGATTCAGTTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp TTCTGTATCCTTTCGCCGAGTGCAGTAAATGATAACTaGATCCAGGGTACGAAAACGGTCCCCTTGCAGCAA +
Preference number: 3 (lower is better)
Translates to: FCILSPSAVNDN*IQGTKTVPLQQ
Trigger: TTGCTGCAAGGGGACCGTTTTCGTACCCTGGATTCAGTTATCATTTACTGCACTCGGCGAAAGGATACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR TCA 72 bp TGGCCCCAACTCGTACAAAGCGTTTGTTTTTCATGTTaGGTCGAATATAGTTCCCTCTGTCTAGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: WPQLVQSVCFSC*VEYSSLCLGKL
Trigger: CAGCTTCCCTAGACAGAGGGAACTATATTCGACTCAACATGAAAAACAAACGCTTTGTACGAGTTGGGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR-3UTR CAA 90 bp CTGCACACGGTTGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCATCTGTCAGTTTTTATTCTGCAGTTaGGATCTTCTTATCCCCTTC +
Preference number: 3 (lower is better)
Translates to: LHTVVQKVTDLVLFLICQFLFCS*DLLIPF
Trigger: GAAGGGGATAAGAAGATCCAAACTGCAGAATAAAAA...CTGACAGATGAGGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGAGTGCCCGCTCATaGCCCAGGCAGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGSARS*PRQAWP
Trigger: GGGCCAGGCCTGCCTGGGCCATGAGCGGGCACTCCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CCAGGGCGGAAGGCTCGGTACCCTAGCCGCTCTAGGGCCTGGAATACTTCAGCAGGGACCCCAGCAGCTTaGCTCCTGTGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGRKARYPSRSRAWNTSAGTPAA*LLCLLS
Trigger: GCTGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCC...TGCTGAAGTATTCCAGGCCCTAGAGCGGCTAGGGTACCGAGCCTTCCGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 72 bp GGCAGGCTTCCCATCACGCCCTGCACGGCCGATAGCTaGCACGTAGCTCTCGAAGCTTGGAGGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRLPITPCTADS*HVALEAWRQSQ
Trigger: CTGGGACTGCCTCCAAGCTTCGAGAGCTACGTGCAAGCTATCGGCCGTGCAGGGCGTGATGGGAAGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 72 bp CCTCAGGGACAGGAGCTGGCGGACATCCCGGCGTATTaGGTCCTCCCAGTCCTGAAGCTGAGTCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQGQELADIPAY*VLPVLKLSLPR
Trigger: CCTGGGCAGACTCAGCTTCAGGACTGGGAGGACCAAATACGCCGGGATGTCCGCCAGCTCCTGTCCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCGAGACCACGAGTGTaGGGCAGGGGCTTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEARPRV*GRGFAG
Trigger: CCCAGCGAAGCCCCTGCCTCACACTCGTGGTCTCGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCAATTGGAGGCAGCTaGGCGGCCTGGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEAIGGS*AAWGRL
Trigger: CAGCCTCCCCCAGGCCGCTCAGCTGCCTCCAATTGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp ATCCCTGTCACCTTCCTCTTGGACGGTCAGGGTGGGGCCTGGTTGGGAACACTGGCAGCTCGACTCAGGTaGGGACCCCAGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: IPVTFLLDGQGGAWLGTLAARLR*GPQQLG
Trigger: GCCAAGCTGCTGGGGTCCCCACCTGAGTCGAGCTGC...CAGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAGAGGAAGGTGACAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTCAGACAGGGGTCCTaGTCCGCTGCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELRQGS*SAAGLV
Trigger: GACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTGTGGGCCAGAGCTTaGAGCTGGGCACTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELWARA*SWALPP
Trigger: TGGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCACAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGACCCCAGCAGCTTaGCTCCTGTGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGTPAA*LLCLLS
Trigger: GCTGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCAGCTCGACTCAGGTaGGGACCCCAGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEAARLR*GPQQLG
Trigger: GCCAAGCTGCTGGGGTCCCCACCTGAGTCGAGCTGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGATGATCGGAGCTGCTaGAGCTGGCCCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEDDRSC*SWPSLG
Trigger: GCCGAGGCTGGGCCAGCTCCAGCAGCTCCGATCATC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTCGCTGAACTTCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTTGGCTCGATGATCGGAGCTGCTaGAGCTGGCCCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LAELHKHSGALCCAFLWLDDRSC*SWPSLG
Trigger: GCCGAGGCTGGGCCAGCTCCAGCAGCTCCGATCATC...GAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGAAGTTCAGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGGGATTCAGTCTTTaGGCCTGGTGGCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGGFSL*AWWPWG
Trigger: GCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGACACGATCAGCACGTaGACCTGGGCTGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEDTIST*TWAART
Trigger: GGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGACTGCACTGGGAGTaGCCGCTCATGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERLHWE*PLMAQA
Trigger: TGCCTGGGCCATGAGCGGGCACTCCCAGTGCAGTCT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGGGTGGGGCCTGGTTaGGAACACTGGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERVGPG*EHWDAQ
Trigger: CTGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGTCAGGGTGGGGCCTaGTTGGGAACACTGGGATGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGQGGA*LGTLGC
Trigger: GCATCCCAGTGTTCCCAACCAGGCCCCACCCTGACC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCAGGCGAAGGCAATTaGAGGCAGCTGAGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEAGEGN*RQLSGL
Trigger: CAGGCCGCTCAGCTGCCTCCAATTGCCTTCGCCTGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
3UTR CAA 72 bp TCACAAGCACTCCGGTGCCCTGTGCTGCGCCTTTCTTaGGCTCTGGGTCCCACTTCAGCTGGTGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQALRCPVLRLS*ALGPTSAGGEP
Trigger: AGGCTCTCCACCAGCTGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCACAGGGCACCGGAGTGCTTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGATTGGGGTGGGGCAATaGGGCACCTGTAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEIGVGQ*GTCSSG
Trigger: GCCAGAGCTACAGGTGCCTCATTGCCCCACCCCAAT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGTGTGGCTGTGGCTGTaGGACCCAAGAAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEVWLWL*DPRSSA
Trigger: TGCGCTGCTTCTTGGGTCTCACAGCCACAGCCACAC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGCAGGGATGTTGGCTaGCCCGCTGAGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGRDVG*PAELKL
Trigger: GAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACAGCCTCTTGGCCTTaGGTCGCCCACCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETASWP*VAHHGQ
Trigger: CTGTCCATGGTGGGCGACTCAAGGCCAAGAGGCTGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGATGATTGCACGCTCTTaGCCAGGGCGGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEMIARS*PGRKAR
Trigger: CCGAGCCTTCCGCCCTGGGCAAGAGCGTGCAATCAT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGAGGCAGTCCCAGGTaGAGCACAGCCCGAACATCT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGGSPR*STARTS
Trigger: AGATGTTCGGGCTGTGCTGCACCTGGGACTGCCTCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCCACTTGGCCTGGCATaGAGCCAAAGGGGGACACCT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEPLGLA*SQRGTP
Trigger: AGGTGTCCCCCTTTGGCTGCATGCCAGGCCAAGTGG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCCGGTGCCCTGTGCTaGGCCTTTCTTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESGALC*AFLWLW
Trigger: CCAGAGCCAAAGAAAGGCGCAGCACAGGGCACCGGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCCTTGTCTGTGGCCCTaGGTCCACTTCCCCCAAACG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEPCLWP*VHFPQT
Trigger: CGTTTGGGGGAAGTGGACCCAGGGCCACAGACAAGG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTTGGACGGTCAGGGTaGGGCCTGGTTGGGAACACT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELGRSG*GLVGNT
Trigger: AGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGAGTCGCCCACCATaGACAGGCAGGTGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELSRPP*TGRCGG
Trigger: TCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACTACCATGCGCAGGTaGCCCCGCATGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETTMRR*PRMKAC
Trigger: ACAGGCCTTCATGCGGGGCCACCTGCGCATGGTAGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTGGCCCAGGCAGGCCTaGCCCAGTACAGGGTATGTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEWPRQA*PSTGYV
Trigger: AACATACCCTGTACTGGGCCAGGCCTGCCTGGGCCA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAAAGGGGGACACCTGTaGGCCAGAGCTTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEKGGHL*ARACSW
Trigger: CCAGCTGCAAGCTCTGGCCCACAGGTGTCCCCCTTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGTCCCACTTCAGCTaGTGGAGAGCCTGCCGTACA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGSHFS*WRACRT
Trigger: TGTACGGCAGGCTCTCCACCAGCTGAAGTGGGACCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGACTCGCAATGCCATaGAAGATGCGGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGLAMP*KMRATA
Trigger: GGCTGTGGCCCGCATCTTCCATGGCATTGCGAGTCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTGGTCATCCATGAGTaGCAGGAGAGGCGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELVIHE*QERRDH
Trigger: GTGGTCTCGCCTCTCCTGTCACTCATGGATGACCAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGCTGCCTTCAGACATaGAGGCAGATCGGACACCTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGCLQT*RQIGHL
Trigger: CAGGTGTCCGATCTGCCTTCATGTCTGAAGGCAGCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGCCGGAAGTTATGTaGCCACTGAGAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGPEVM*PLREAV
Trigger: CACTGCCTCTCTCAGTGGTCACATAACTTCCGGCCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCTATGCCAAGGTGCTaGGCCACATCTCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEAMPRC*ATSRAV
Trigger: CACTGCTCGAGATGTGGCTCAGCACCTTGGCATAGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGTGGGAACACACGCTaGACCAGCCTCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGGNTR*TSLFTA
Trigger: AGCTGTGAAGAGGCTGGTGCAGCGTGTGTTCCCACC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCCTGTACTGTAGACTaGACTGGGAGTGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEACTVD*TGSARS
Trigger: TGAGCGGGCACTCCCAGTGCAGTCTACAGTACAGGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAATGCCATGGAAGATaGGGGCCACAGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQCHGR*GPQPFL
Trigger: CAGGAAGGGCTGTGGCCCGCATCTTCCATGGCATTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGTCCTGCTCCGCTGCTaGGCTGGTCTTGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEVLLRC*AGLVQS
Trigger: ACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGAC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGTCGAGGAGAGGCATaGAGGTGGGTTGTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGRGEA*RWVVPL
Trigger: TAAGGGCACAACCCACCTCCATGCCTCTCCTCGACC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAAGTGTCCTTGTCTGTaGCCCTGGGTCCACTTCCCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEKCPCL*PWVHFP
Trigger: GGGGAAGTGGACCCAGGGCCACAGACAAGGACACTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGGTGACATTGGGGTaGGGCAATGAGGCACCTGTA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGVTLG*GNEAPV
Trigger: TACAGGTGCCTCATTGCCCCACCCCAATGTCACCCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGATCAGCACGTGCACCTaGGCTGCCCGTACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEISTCT*AARTFF
Trigger: GAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGAT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCGGAGAGGTGCAGATTaGCAGGGATGTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERRGAD*QGCWLT
Trigger: GGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGTAGCTCTCGAAGCTTaGAGGCAGTCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEVALEA*RQSQVQ
Trigger: CTGCACCTGGGACTGCCTCCAAGCTTCGAGAGCTAC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCAGTGCTGTCAGCGTaGGCATGTCTGCGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESVLSA*ACLRSS
Trigger: GGAACTGCGCAGACATGCCCACGCTGACAGCACTGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGGAAACAGGTCTCTaGCTGCAGGTGCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELETGL*LQVQGG
Trigger: CCCACCCTGCACCTGCAGCCAGAGACCTGTTTCCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTACTGTAGACTGCACTaGGAGTGCCCGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEYCRLH*ECPLMA
Trigger: GGCCATGAGCGGGCACTCCCAGTGCAGTCTACAGTA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAAGGCCTTGGACATTTaGTGTAGGTGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEKALDI*CRWARA
Trigger: GGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACCTTGCCTGACATCTaGGGCTGTGACTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETLPDI*GCDSSA
Trigger: TGCAGAGGAGTCACAGCCTCAGATGTCAGGCAAGGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTGTCCTGGCCTGGTTTaGGGAATTGCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSECPGLV*GIAWLR
Trigger: CCTCAGCCATGCAATTCCTCAAACCAGGCCAGGACA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACACCTGGTCATCCATaGGTGACAGGAGAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETPGHP*VTGEAR
Trigger: TCTCGCCTCTCCTGTCACTCATGGATGACCAGGTGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCACCAGAGCCTGGTCTaGGTCTCTATCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEHQSLV*VSIHGH
Trigger: GTGTCCATGGATAGAGACTCAGACCAGGCTCTGGTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGGGAACACTGGGATaGCCAGTGACCAAACTGCCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELGTLG*PVTKLP
Trigger: GGGCAGTTTGGTCACTGGGCATCCCAGTGTTCCCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAAGAATCCGCATGATTaGACGCTCTTGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEKNPHD*TLLPRA
Trigger: CGCCCTGGGCAAGAGCGTGCAATCATGCGGATTCTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTGGGCATAGAGCAGTaGAGGAAGCTGGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELGIEQ*RKLVAQ
Trigger: CTGTGCTACCAGCTTCCTGCACTGCTCTATGCCCAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCGAAAACGGTCCCCTTaGAGCAATGTCACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERKRSP*SNVTRA
Trigger: GGCTCTGGTGACATTGCTGCAAGGGGACCGTTTTCG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAGCGTGGGCATGTCTaGGCAGTTCCCAAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQRGHV*AVPKGL
Trigger: AAGACCTTTGGGAACTGCGCAGACATGCCCACGCTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAAACAGGTCTCTGGCTaGAGGTGCAGGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEKQVSG*RCRVGT
Trigger: TGTTCCCACCCTGCACCTGCAGCCAGAGACCTGTTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGCAGATCGGACACCTaGTCATCCATGAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGRSDT*SSMSDR
Trigger: CCTGTCACTCATGGATGACCAGGTGTCCGATCTGCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGTGCATGAATAGGTaGCAATGGGCAGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGCMNR*QWAGFP
Trigger: TGGGAAGCCTGCCCATTGCCACCTATTCATGCACCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCCTCAGGTGAGGACTTaGAAACAGGTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEPQVRT*KQVSGC
Trigger: GCAGCCAGAGACCTGTTTCCAAGTCCTCACCTGAGG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
3UTR CAA 72 bp TCCATGGACACGGAGAGGTGCAGATTGGCAGGGATGTaGGCTGACCCGCTGAGCTCAAACTCGCCAGCTATG +
Preference number: 4 (lower is better)
Translates to: SMDTERCRLAGM*ADPLSSNSPAM
Trigger: CATAGCTGGCGAGTTTGAGCTCAGCGGGTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGTGTCCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 72 bp TGGCCACTGTGCTCTTTGACTTCCTCAGGTGAGGACTaGGAAACAGGTCTCTGGCTGCAGGTGCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WPLCSLTSSGED*ETGLWLQVQGG
Trigger: CCCACCCTGCACCTGCAGCCAGAGACCTGTTTCCAAGTCCTCACCTGAGGAAGTCAAAGAGCACAGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTTCTTGGTCATTCCTaGGTGGAGGCAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFLGHS*VEAGCL
Trigger: AAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGGTGCATCAGGGCATaGAAGTCCAGGTGTAGGTAC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERCIRA*KSRCRY
Trigger: GTACCTACACCTGGACTTTCATGCCCTGATGCACCT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAGCGATGTTCACCTTaGCTGACATCTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQRCSP*LTSEAV
Trigger: CACAGCCTCAGATGTCAGGCAAGGTGAACATCGCTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGCTCCCGGAGAACTTTaGAAACACGTAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEAPGEL*KHVGSR
Trigger: CCTGCTACCTACGTGTTTGCAAAGTTCTCCGGGAGC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAAACTCGCCAGCTATaGCAAGGTGCTGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQTRQL*QGAEPH
Trigger: ATGTGGCTCAGCACCTTGGCATAGCTGGCGAGTTTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGATGGACACGGAGAGGTaGAGATTGGCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEMDTER*RLAGML
Trigger: CAACATCCCTGCCAATCTGCACCTCTCCGTGTCCAT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAGTCCCATCCCAAATaGTACCGTGGCCACTACCAT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQSHPK*YRGHYH
Trigger: ATGGTAGTGGCCACGGTAGCATTTGGGATGGGACTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCTTCACCCTGGGGGTaGATGAATAGGTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESSPWG*MNRWQW
Trigger: CCATTGCCACCTATTCATGCACCCCCAGGGTGAAGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTCTGTGACAAAACCTaGGCTGGCTGTTGGGCTATG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELCDKT*AGCWAM
Trigger: CATAGCCCAACAGCCAGCCCAGGTTTTGTCACAGAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGATGAATAGGTGGCAATaGGCAGGCTTCCCATCACGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEMNRWQ*AGFPSR
Trigger: GCGTGATGGGAAGCCTGCCCATTGCCACCTATTCAT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAAAGGTCTTCACCCTaGGGGTGCATGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQRSSP*GCMNRW
Trigger: CCACCTATTCATGCACCCCCAGGGTGAAGACCTTTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGTCTGCCCAGGTTTTaGACCCTGAGTGTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESLPRF*TLSVRH
Trigger: ATGACGGACACTCAGGGTCCAAAACCTGGGCAGACT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
3UTR CAA 72 bp GGTCCACAACTGGGAAAGGCCACACTTCGAAAGGCCTaGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GPQLGKATLRKA*DIWCRWARALC
Trigger: ACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGCCTTTCGAAGTGTGGCCTTTCCCAGTTGTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCCTGCCTTTACTGTTaGTGGATTTGGGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESCLYC*WIWGSV
Trigger: CACAGAGCCCCAAATCCATCAACAGTAAAGGCAGGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAAGTTATGTGACCACTaGGAGAGGCAGTGGACCTCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEKLCDH*ERQWTS
Trigger: TGAGGTCCACTGCCTCTCTCAGTGGTCACATAACTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGAAGCTGGAGTTTTCTaGTCTGGGTTGGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEEAGVF*SGLVQS
Trigger: AGACTGGACCAACCCAGAGCAGAAAACTCCAGCTTC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR GCA 90 bp GCCTTGGACATTTGGTGTAGGTGGGCCAGGGCCTTGTGTTCACGAGCCTGCACAGAAGCTGGAGTTTTCTaGTCTGGGTTGGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ALDIWCRWARALCSRACTEAGVF*SGLVQS
Trigger: AGACTGGACCAACCCAGAGCAGAAAACTCCAGCTTC...TGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCTACACCAAATGTCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGTGCCTGTCCTCTGTaGTACTTCTTCCAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESACPL*YFFQGG
Trigger: TCCACCTTGGAAGAAGTAGCACAGAGGACAGGCACT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp ATCCCTGTCACCTTCCTCTTGGACGGTCAGGGTGGGGCCTGGTTGGGAACACTGTTGGGGCAGGAACTGTaGACAAGGATCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: IPVTFLLDGQGGAWLGTLLGQEL*TRISSE
Trigger: TTCAGAAGAGATCCTTGTCCACAGTTCCTGCCCCAA...CAGTGTTCCCAACCAGGCCCCACCCTGACCGTCCAAGAGGAAGGTGACAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGGGCTATGGCCTCTaGGCTCTGTACAGATACTTC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELGYGL*ALYRYF
Trigger: GAAGTATCTGTACAGAGCCCAGAGGCCATAGCCCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGACATTCACTTGTGTaGGTTCTCCTGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGHSLV*VLLEGL
Trigger: AAGACCCTCCAGGAGAACCCACACAAGTGAATGTCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTCTCTGTCCTGGCCTaGTTTGAGGAATTGCATGGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFSVLA*FEELHG
Trigger: GCCATGCAATTCCTCAAACCAGGCCAGGACAGAGAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTGAGTCTCTATCCATaGACACGGAGAGGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELSLYP*TRRGAD
Trigger: ATCTGCACCTCTCCGTGTCCATGGATAGAGACTCAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGACAAGGATCTCTTCTaGAGCTGGAGTTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEDKDLF*SWSFLL
Trigger: GAGCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCTGTACAGATACTTCTaGCTGGATGTCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELYRYF*LDVRIS
Trigger: GCTGATCCTGACATCCAGTCAGAAGTATCTGTACAG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTTGACTTCCTCAGGTaGGGACTTGGAAACAGGTCT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFDFLR*GLGNRS
Trigger: AGACCTGTTTCCAAGTCCTCACCTGAGGAAGTCAAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCCTGGTTTGAGGAATTaGATGGCTGAGGGACATTCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEPGLRN*MAEGHS
Trigger: TGAATGTCCCTCAGCCATGCAATTCCTCAAACCAGG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGTTTGTTGGCCACTGTaGTCTTTGACTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEVCWPL*SLTSSG
Trigger: ACCTGAGGAAGTCAAAGAGCACAGTGGCCAACAAAC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTGGAGTTTTCTGCTCTaGGTTGGTCCAGTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEWSFLL*VGPVCV
Trigger: AACACAGACTGGACCAACCCAGAGCAGAAAACTCCA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGGGGCAGGAACTGTaGACAAGGATCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELGQEL*TRISSE
Trigger: TTCAGAAGAGATCCTTGTCCACAGTTCCTGCCCCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACTCTCGTTGTTTCTTaGTCATTCCTGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETLVVS*SFLSGG
Trigger: GCCTCCACTCAGGAATGACCAAGAAACAACGAGAGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
3UTR CAA 72 bp TGGGCCAGGGCCTTGTGTTCACGAGCCTGCACACGGTaGTACAGAAAGTCACAGATCTGGTCCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: WARALCSRACTR*YRKSQIWSFSS
Trigger: TGAGGAAAAGGACCAGATCTGTGACTTTCTGTACAACCGTGTGCAGGCTCGTGAACACAAGGCCCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCTGAAACTCTGTTGTaGCACCTCTCTAACCAACCA +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESETLL*HLSNQP
Trigger: TGGTTGGTTAGAGAGGTGTCACAACAGAGTTTCAGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTTTCTGCTCTGGGTTaGTCCAGTCTGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFSALG*SSLCCV
Trigger: AACACAACACAGACTGGACCAACCCAGAGCAGAAAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CGGTACCCTAGCCGCTCTAGGGCCTGGAATACTTCAGCAGGGGTTTCTGCTACTTGGAGTTTTCTGCTCTaGGTTGGTCCAGTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RYPSRSRAWNTSAGVSATWSFLL*VGPVCV
Trigger: AACACAGACTGGACCAACCCAGAGCAGAAAACTCCA...AGTAGCAGAAACCCCTGCTGAAGTATTCCAGGCCCTAGAGCGGCTAGGGTACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR CCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACAGATACTTCTGACTaGATGTCAGGATCAGCGATG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETDTSD*MSGSAM
Trigger: CATCGCTGATCCTGACATCCAGTCAGAAGTATCTGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
3UTR CAA 72 bp ACTTCCCCCAAACGCAGCTTGTTTCTTCTTCCACTTTaGCTTCCATACCTGCTTACGGAGAAGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TSPKRSLFLLPL*LPYLLTEKPAP
Trigger: CGGGGCAGGCTTCTCCGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAAACAAGCTGCGTTTGGGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
3UTR CAA 72 bp GCCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTaGGTCATTCCTGAGTGGAGGCAGGCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ARTFFKTDSRCF*VIPEWRQAAFR
Trigger: TCTGAAGGCAGCCTGCCTCCACTCAGGAATGACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTTTCAGATTGGCTTTaGGCCTCTTCCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFSDWL*ASSHSL
Trigger: AAGACTATGGGAAGAGGCTCAAAGCCAATCTGAAAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR TCA 90 bp TTCCTGGCTGCTCATGCCAGCATGGTAGGCTTCAGCTATAGCCTCGGGGCCACATTTTCAGATTGGCTTTaGGCCTCTTCCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: FLAAHASMVGFSYSLGATFSDWL*ASSHSL
Trigger: AAGACTATGGGAAGAGGCTCAAAGCCAATCTGAAAA...TGTGGCCCCGAGGCTATAGCTGAAGCCTACCATGCTGGCATGAGCAGCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR GCA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTCTTCTTCCACTTTTaGTTCCATACCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFFFHF*FHTCLR
Trigger: CCGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR TCA 90 bp TGCACCTGGGCTGCCCGTACCTTCTTCAAGACAGACTCTCGTTGTTTCTTGGTCGACAAGGATCTCTTCTaGAGCTGGAGTTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CTWAARTFFKTDSRCFLVDKDLF*SWSFLL
Trigger: GAGCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTC...GACCAAGAAACAACGAGAGTCTGTCTTGAAGAAGGTACGGGCAGCCCAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS GCA 90 bp CCAGGGTCTAGGGAAGTCAACCTCCGGCTGAGGGATGATCGGAGCTaGTGGAGCTGGCCCAGCCTCGGCCGGGGCTCAGGAACCCGAGGA +
Preference number: 5 (lower is better)
Translates to: PGSREVNLRLRDDRS*WSWPSLGRGSGTRG
Trigger: TCCTCGGGTTCCTGAGCCCCGGCCGAGGCTGGGCCAGCTCCAGCAGCTCCGATCATCCCTCAGCCGGAGGTTGACTTCCCTAGACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS CCA 90 bp GGGTCTAGGGAAGTCAACCTCCGGCTGAGGGATGATCGGAGCTGCTaGAGCTGGCCCAGCCTCGGCCGGGGCTCAGGAACCCGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GSREVNLRLRDDRSC*SWPSLGRGSGTRGS
Trigger: ACTTCCTCGGGTTCCTGAGCCCCGGCCGAGGCTGGGCCAGCTCCAGCAGCTCCGATCATCCCTCAGCCGGAGGTTGACTTCCCTAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTCTGGGGACACGATCAGCACGTGCACCTGGGCTGCCCGTACCTTCTTCAAGACGGGGACCCCAGCAGCTaGGCTCCTGTGCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LWGHDQHVHLGCPYLLQDGDPSS*APVPPQ
Trigger: CTGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCCC...GTCTTGAAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCCTGTGGGCCAGAGCTaGCAGCTGGGCACTGCCGCC +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEPVGQS*QLGTAA
Trigger: GGCGGCAGTGCCCAGCTGCAAGCTCTGGCCCACAGG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGGGGACCCCAGCAGCTaGGCTCCTGTGCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEGDPSS*APVPPQ
Trigger: CTGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCCC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTCTTGGCCTTGAGTCGCCCACCATGGACAGGCAGGTGCGGAGGAGTGCAGCCAAGGGGGATTCAGTCTTaGAGCCTGGTGGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LLALSRPPWTGRCGGVQPRGIQS*SLVALG
Trigger: CCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCT...TGGCTGCACTCCTCCGCACCTGCCTGTCCATGGTGGGCGACTCAAGGCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS GCA 90 bp GTCTTGCCCATGTACTGTAGCCCTGGCTCCCTCAGACAGGGGTCCTaGTCCGCTGCTGGGCTGGTCTTGTGCAAAGTCCTCCCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VLPMYCSPGSLRQGS*SAAGLVLCKVLPLL
Trigger: GAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAGGGAGCCAGGGCTACAGTACATGGGCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CCA 90 bp GTAGCCCTGGCTCCCTCAGACAGGGGTCCTGCTCCGCTGCTGGGCTaGTCTTGTGCAAAGTCCTCCCCCTTCTCATTCCACTTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: VALAPSDRGPAPLLG*SCAKSSPFSFHFRF
Trigger: GAAGCGGAAGTGGAATGAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAGGGAGCCAGGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS-3UTR CAA 90 bp CAAGGCCTCTGGGGACACGATCAGCACGTGCACCTGGGCTGCCCGTACCTTCTTTTGAGCCTGGTGGCCTaGGGGCAGGAACTGTGGACA +
Preference number: 5 (lower is better)
Translates to: QGLWGHDQHVHLGCPYLLLSLVA*GQELWT
Trigger: TGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAA...AAGAAGGTACGGGCAGCCCAGGTGCACGTGCTGATCGTGTCCCCAGAGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCAGGGTGGGGCCTGGTaGGGAACACTGGGATGCCCA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEQGGAW*GTLGCP
Trigger: TGGGCATCCCAGTGTTCCCAACCAGGCCCCACCCTG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAACCTGGGCTGGCTGTaGGGCTATGGCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSENLGWL*GYGLWA
Trigger: AGCCCAGAGGCCATAGCCCAACAGCCAGCCCAGGTT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTGCAGGCGAAGGCAATaGGAGGCAGCTGAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSECRRRQ*EAAERP
Trigger: AGGCCGCTCAGCTGCCTCCAATTGCCTTCGCCTGCA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGGTGGGCCAGGGCCTaGTGTTCACGAGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERWARA*CSRACT
Trigger: TGTGCAGGCTCGTGAACACAAGGCCCTGGCCCACCT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS TCA 90 bp GGCCCAGGGCGGCAGCTTACAGGAAGACAAGATAGCAGCTGGGGCTaGAGTGGCCTAGGAATAGTGGAACCCCTGGGTCTGTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: GPGRQLTGRQDSSWG*SGLGIVEPLGLSWS
Trigger: AGACCAGGACAGACCCAGGGGTTCCACTATTCCTAGGCCACTTCAGCCCCAGCTGCTATCTTGTCTTCCTGTAAGCTGCCGCCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS CCA 90 bp TGTTTTGGCATAGACTGCGTATTCTGCGTTGCAGCTCGACTCAGGTaGGGACCCCAGCAGCTTGGCTCCTGTGCCTCCTCAGCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: CFGIDCVFCVAARLR*GPQQLGSCASSAAS
Trigger: CGAGGCAGCTGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCCCACCTGAGTCGAGCTGCAACGCAGAATACGCAGTCTATGCCAAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGAGCCTGGTGGCCTaGGGGCAGGAACTGTGGACA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELSLVA*GQELWT
Trigger: TGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGAGGGGGATTCAGTCTTaGAGCCTGGTGGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERGIQS*SLVALG
Trigger: CCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCGTAGCTCTCGAAGCTaGGAGGCAGTCCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERSSRS*EAVPGA
Trigger: TGCACCTGGGACTGCCTCCAAGCTTCGAGAGCTACG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS CCA 90 bp CGCTGCACCAGCCTCTTCACAGCTAGGAAGTCAGTGCTGTCAGCGTaGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTGCATTGGG +
Preference number: 5 (lower is better)
Translates to: RCTSLFTARKSVLSA*ACLRSSQRSSPCIG
Trigger: CCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTGTGAAGAGGCTGGTGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGCGGAAACAAGTGTCCTaGTCTGTGGCCCTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSERKQVS*SVALGP
Trigger: TGGACCCAGGGCCACAGACAAGGACACTTGTTTCCG...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGACGGAGAGGTGCAGATaGGCAGGGATGTTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSETERCR*AGMLAD
Trigger: GTCAGCCAACATCCCTGCCAATCTGCACCTCTCCGT...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTGCACGGCCGATAGCTaGCACGTAGCTCTCGAAGCT +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSECTADS*HVALEA
Trigger: AGCTTCGAGAGCTACGTGCAAGCTATCGGCCGTGCA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGTGCTGCGCCTTTCTTaGGCTCTGGGTCCCACTTCA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEVLRLS*ALGPTS
Trigger: TGAAGTGGGACCCAGAGCCAAAGAAAGGCGCAGCAC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGAGTCTGCCCAGGTTTaGGACCCTGAGTGTCCGTCA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEESAQV*DPECPS
Trigger: TGACGGACACTCAGGGTCCAAAACCTGGGCAGACTC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGACATCCCGGCGTATTaGGTCCTCCCAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEDIPAY*VLPVLK
Trigger: CTTCAGGACTGGGAGGACCAAATACGCCGGGATGTC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTCTCCTGGAGGGTCTaGCCCATGTACTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFSWRV*PMYCSP
Trigger: AGGGCTACAGTACATGGGCAAGACCCTCCAGGAGAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCCTCAGGTGAGGACTaGGAAACAGGTCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESSGED*ETGLWL
Trigger: CAGCCAGAGACCTGTTTCCAAGTCCTCACCTGAGGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCTTTAGGTGGCCACTaGGCCTGGCATGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESLGGH*AWHAAK
Trigger: TTTGGCTGCATGCCAGGCCAAGTGGCCACCTAAAGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS CCA 90 bp AGCGTGGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTGCATTaGGACAGTCATATGCACAGAACTACCACACTTAGGCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SVGMSAQFPKVFTLH*DSHMHRTTTLRPRA
Trigger: CGCCCTGGGCCTAAGTGTGGTAGTTCTGTGCATATGACTGTCCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS TCA 90 bp AGGAAGTGCATCGTCAGCTTCGTCTGGACAGGGGGATTCAGTCTTTaGGCCTGGTGGCCTTGGGGCAGGAACTGTGGACAAGGATCTCTT +
Preference number: 5 (lower is better)
Translates to: RKCIVSFVWTGGFSL*AWWPWGRNCGQGSL
Trigger: AAGAGATCCTTGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCTGTCCAGACGAAGCTGACGATGCACTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS TCA 90 bp TCTGACTGGATGTCAGGATCAGCGATGTTCACCTTGCCTGACATCTaGGGCTGTGACTCCTCTGCACTCAGGTCAAGCCCACAAGCACCC +
Preference number: 5 (lower is better)
Translates to: SDWMSGSAMFTLPDI*GCDSSALRSSPQAP
Trigger: GGGTGCTTGTGGGCTTGACCTGAGTGCAGAGGAGTCACAGCCTCAGATGTCAGGCAAGGTGAACATCGCTGATCCTGACATCCAGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS GCA 90 bp GCGCAGCAGGCTGTGTTTCCTCACCAGAGTGGTGACAGGAAGCAGTaGCTGTCCTCTGTGCTACTTCTTCCAAGGTGGAAATGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: AQQAVFPHQSGDRKQ*LSSVLLLPRWKWAV
Trigger: AACAGCCCATTTCCACCTTGGAAGAAGTAGCACAGAGGACAGGCACTGCTTCCTGTCACCACTCTGGTGAGGAAACACAGCCTGCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS-3UTR CAA 90 bp CCGTTCCTGGCTGCTCATGCCAGCATGGTAGGCTTCAGCTATAGCCTCGGGGCCGTTGTGTTTTTCAGATaGGCTTTGAGCCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: PFLAAHASMVGFSYSLGAVVFFR*ALSLFP
Trigger: TGGGAAGAGGCTCAAAGCCAATCTGAAAAACACAAC...GGCCCCGAGGCTATAGCTGAAGCCTACCATGCTGGCATGAGCAGCCAGGAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230724.2
CDS TCA 90 bp ATGGAGGTGGGTTGTGCCCTTAGCCTTCTCTGTCCTGGCCTGGTTTaGGGAATTGCATGGCTGAGGGACATTCACTTGTGTGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: MEVGCALSLLCPGLV*GIAWLRDIHLCGFS
Trigger: GGAGAACCCACACAAGTGAATGTCCCTCAGCCATGCAATTCCTCAAACCAGGCCAGGACAGAGAAGGCTAAGGGCACAACCCACCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS GCA 90 bp CTGTCAGCGTGGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTaGATTGGGACAGTCATATGCACAGAACTACCACACTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: LSAWACLRSSQRSSP*IGTVICTELPHLGP
Trigger: TGGGCCTAAGTGTGGTAGTTCTGTGCATATGACTGTCCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS GCA 90 bp GCCTCTTCACAGCTAGGAAGTCAGTGCTGTCAGCGTGGGCATGTCTaGGCAGTTCCCAAAGGTCTTCACCCTGCATTGGGACAGTCATAT +
Preference number: 5 (lower is better)
Translates to: ASSQLGSQCCQRGHV*AVPKGLHPALGQSY
Trigger: ATATGACTGTCCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTGTGAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTCCCCCAAACGCAGCTaGTTTCTTCTTCCACTTTTG +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSESPKRS*FLLPLL
Trigger: CAAAAGTGGAAGAAGAAACAAGCTGCGTTTGGGGGA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGGTTGTGTTTTTCAGATaGGCTTTGAGCCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEVVFFR*ALSLFP
Trigger: TGGGAAGAGGCTCAAAGCCAATCTGAAAAACACAAC...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTGGTCCAGTCTGTGTaGTGTTTTTCAGATTGGCTT +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSELVQSV*CFSDWL
Trigger: AAGCCAATCTGAAAAACACAACACAGACTGGACCAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS-3UTR CAA 90 bp CTGACAGTCAGTGATGGCCACATCATGGCCTTGGTGAGCCTGACACCCTCGGAGTTTCTTCTTCCACTTTaGCTTCCATACCTGCTTACG +
Preference number: 5 (lower is better)
Translates to: LTVSDGHIMALVSLTPSEFLLPL*LPYLLT
Trigger: CGTAAGCAGGTATGGAAGCAAAAGTGGAAGAAGAAA...CTCCGAGGGTGTCAGGCTCACCAAGGCCATGATGTGGCCATCACTGACTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036852.9
CDS GCA 90 bp GGGCAGGAACTGTGGACAAGGATCTCTTCTGAAGCTGGAGTTTTCTaGTCTGGGTTGGTCCAGTCTGTGTTGTGTTTTTCAGATTGGCTT +
Preference number: 5 (lower is better)
Translates to: GQELWTRISSEAGVF*SGLVQSVLCFSDWL
Trigger: AAGCCAATCTGAAAAACACAACACAGACTGGACCAACCCAGAGCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTCCACAGTTCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS CCA 90 bp TGTGGACAAGGATCTCTTCTGAAGCTGGAGTTTTCTGCTCTGGGTTaGTCCAGTCTGTGTTGTGTTTTTCAGATTGGCTTTGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: CGQGSLLKLEFSALG*SSLCCVFQIGFEPL
Trigger: AAGAGGCTCAAAGCCAATCTGAAAAACACAACACAGACTGGACCAACCCAGAGCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS GCA 72 bp ACGGTACTCACGGTAGAGCGCGCGGGTCTCTTCAGGTaGCGCCTCCACATCCCCCTTCGCTGGCCGTCGCCC +
Preference number: 6 (lower is better)
Translates to: TVLTVERAGLFR*RLHIPLRWPSP
Trigger: GGGCGACGGCCAGCGAAGGGGGATGTGGAGGCGGCACCTGAAGAGACCCGCGCGCTCTACCGTGAGTACCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS CCA 72 bp GAAGTCAACCTCCGGCTGAGGGATGATCGGAGCTGCTaGAGCTGGCCCAGCCTCGGCCGGGGCTCAGGAACC +
Preference number: 6 (lower is better)
Translates to: EVNLRLRDDRSC*SWPSLGRGSGT
Trigger: GGTTCCTGAGCCCCGGCCGAGGCTGGGCCAGCTCCAGCAGCTCCGATCATCCCTCAGCCGGAGGTTGACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS CCA 72 bp CCCTGGCTCCCTCAGACAGGGGTCCTGCTCCGCTGCTaGGCTGGTCTTGTGCAAAGTCCTCCCCCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: PWLPQTGVLLRC*AGLVQSPPPSH
Trigger: ATGAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAGGGAGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CAA 90 bp CCTGGCTCCCTCAGACAGGGGTCCTGCTCCGCTGCTGGGCTGGTCTaGTGCAAAGTCCTCCCCCTTCTCATTCCACTTCCGCTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: PGSLRQGSCSAAGLV*CKVLPLLIPLPLPA
Trigger: GGCAGGAAGCGGAAGTGGAATGAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAGGGAGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CCA 72 bp GCTCCCTCAGACAGGGGTCCTGCTCCGCTGCTGGGCTaGTCTTGTGCAAAGTCCTCCCCCTTCTCATTCCAC +
Preference number: 6 (lower is better)
Translates to: APSDRGPAPLLG*SCAKSSPFSFH
Trigger: GTGGAATGAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CAA 90 bp GCGTATTCTGCGTTGCAGCTCGACTCAGGTGGGGACCCCAGCAGCTaGGCTCCTGTGCCTCCTCAGCTGCCTCGGCAAGTGATTGCTCTA +
Preference number: 6 (lower is better)
Translates to: AYSALQLDSGGDPSS*APVPPQLPRQVIAL
Trigger: TAGAGCAATCACTTGCCGAGGCAGCTGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCCCACCTGAGTCGAGCTGCAACGCAGAATACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS CCA 72 bp CTGTCTAGGGAAGCTGGTCGAGGAGAGGCATGGAGGTaGGTTGTGCCCTTAGCCTTCTCTGTCCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LSREAGRGEAWR*VVPLAFSVLAW
Trigger: CCAGGCCAGGACAGAGAAGGCTAAGGGCACAACCCACCTCCATGCCTCTCCTCGACCAGCTTCCCTAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CAA 72 bp CTCAGACAGGGGTCCTGCTCCGCTGCTGGGCTGGTCTaGTGCAAAGTCCTCCCCCTTCTCATTCCACTTCCG +
Preference number: 6 (lower is better)
Translates to: LRQGSCSAAGLV*CKVLPLLIPLP
Trigger: CGGAAGTGGAATGAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CAA 90 bp GCATGGCTGAGGGACATTCACTTGTGTGGGTTCTCCTGGAGGGTCTaGCCCATGTACTGTAGCCCTGGCTCCCTCAGACAGGGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: AWLRDIHLCGFSWRV*PMYCSPGSLRQGSC
Trigger: GCAGGACCCCTGTCTGAGGGAGCCAGGGCTACAGTACATGGGCAAGACCCTCCAGGAGAACCCACACAAGTGAATGTCCCTCAGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS GCA 72 bp AGACAGGGGTCCTGCTCCGCTGCTGGGCTGGTCTTGTaGAAAGTCCTCCCCCTTCTCATTCCACTTCCGCTT +
Preference number: 6 (lower is better)
Translates to: RQGSCSAAGLVL*KVLPLLIPLPL
Trigger: AAGCGGAAGTGGAATGAGAAGGGGGAGGACTTTGCACAAGACCAGCCCAGCAGCGGAGCAGGACCCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CCA 72 bp ATAGACTGCGTATTCTGCGTTGCAGCTCGACTCAGGTaGGGACCCCAGCAGCTTGGCTCCTGTGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: IDCVFCVAARLR*GPQQLGSCASS
Trigger: TGAGGAGGCACAGGAGCCAAGCTGCTGGGGTCCCCACCTGAGTCGAGCTGCAACGCAGAATACGCAGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS CCA 72 bp TTCCCTCTGTCTAGGGAAGCTGGTCGAGGAGAGGCATaGAGGTGGGTTGTGCCCTTAGCCTTCTCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: FPLSREAGRGEA*RWVVPLAFSVL
Trigger: CAGGACAGAGAAGGCTAAGGGCACAACCCACCTCCATGCCTCTCCTCGACCAGCTTCCCTAGACAGAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CAA 72 bp CATCGTCAGCTTCGTCTGGACAGGGGGATTCAGTCTTaGAGCCTGGTGGCCTTGGGGCAGGAACTGTGGACA +
Preference number: 6 (lower is better)
Translates to: HRQLRLDRGIQS*SLVALGQELWT
Trigger: TGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCTGTCCAGACGAAGCTGACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS CAA 90 bp GAGGAAGTGCATCGTCAGCTTCGTCTGGACAGGGGGATTCAGTCTTaGAGCCTGGTGGCCTTGGGGCAGGAACTGTGGACAAGGATCTCT +
Preference number: 6 (lower is better)
Translates to: EEVHRQLRLDRGIQS*SLVALGQELWTRIS
Trigger: AGAGATCCTTGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCTGTCCAGACGAAGCTGACGATGCACTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS TCA 72 bp ATCGTCAGCTTCGTCTGGACAGGGGGATTCAGTCTTTaGGCCTGGTGGCCTTGGGGCAGGAACTGTGGACAA +
Preference number: 6 (lower is better)
Translates to: IVSFVWTGGFSL*AWWPWGRNCGQ
Trigger: TTGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCTGTCCAGACGAAGCTGACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS TCA 72 bp TCTGGCGCAGCAGGCTGTGTTTCCTCACCAGAGTGGTaGCAGGAAGCAGTGCCTGTCCTCTGTGCTACTTCT +
Preference number: 6 (lower is better)
Translates to: SGAAGCVSSPEW*QEAVPVLCATS
Trigger: AGAAGTAGCACAGAGGACAGGCACTGCTTCCTGTCACCACTCTGGTGAGGAAACACAGCCTGCTGCGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS TCA 72 bp CGGCAGCTTACAGGAAGACAAGATAGCAGCTGGGGCTaGAGTGGCCTAGGAATAGTGGAACCCCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: RQLTGRQDSSWG*SGLGIVEPLGL
Trigger: CAGACCCAGGGGTTCCACTATTCCTAGGCCACTTCAGCCCCAGCTGCTATCTTGTCTTCCTGTAAGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS GCA 72 bp CAGCTAGGAAGTCAGTGCTGTCAGCGTGGGCATGTCTaGGCAGTTCCCAAAGGTCTTCACCCTGCATTGGGA +
Preference number: 6 (lower is better)
Translates to: QLGSQCCQRGHV*AVPKGLHPALG
Trigger: TCCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCACGCTGACAGCACTGACTTCCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS CAA 90 bp CAGCTTCGTCTGGACAGGGGGATTCAGTCTTTGAGCCTGGTGGCCTaGGGGCAGGAACTGTGGACAAGGATCTCTTCTGAAGCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: QLRLDRGIQSLSLVA*GQELWTRISSEAGV
Trigger: AACTCCAGCTTCAGAAGAGATCCTTGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCTGTCCAGACGAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS TCA 72 bp GGCCTTGGGGCAGGAACTGTGGACAAGGATCTCTTCTaGAGCTGGAGTTTTCTGCTCTGGGTTGGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: GLGAGTVDKDLF*SWSFLLWVGPV
Trigger: GACTGGACCAACCCAGAGCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTCCACAGTTCCTGCCCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS GCA 72 bp TCCCAAAGGTCTTCACCCTGCATTGGGACAGTCATATaGACAGAACTACCACACTTAGGCCCAGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SQRSSPCIGTVI*TELPHLGPGRQ
Trigger: CTGCCGCCCTGGGCCTAAGTGTGGTAGTTCTGTGCATATGACTGTCCCAATGCAGGGTGAAGACCTTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS CCA 72 bp GGCTCTGTGACAAAACCTGGGCTGGCTGTTGGGCTATaGCCTCTGGGCTCTGTACAGATACTTCTGACTGGA +
Preference number: 6 (lower is better)
Translates to: GSVTKPGLAVGL*PLGSVQILLTG
Trigger: TCCAGTCAGAAGTATCTGTACAGAGCCCAGAGGCCATAGCCCAACAGCCAGCCCAGGTTTTGTCACAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CAA 72 bp CTGGACAGGGGGATTCAGTCTTTGAGCCTGGTGGCCTaGGGGCAGGAACTGTGGACAAGGATCTCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: LDRGIQSLSLVA*GQELWTRISSE
Trigger: TTCAGAAGAGATCCTTGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTGAATCCCCCTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS TCA 72 bp ATGTCAGGATCAGCGATGTTCACCTTGCCTGACATCTaGGGCTGTGACTCCTCTGCACTCAGGTCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: MSGSAMFTLPDI*GCDSSALRSSP
Trigger: TGGGCTTGACCTGAGTGCAGAGGAGTCACAGCCTCAGATGTCAGGCAAGGTGAACATCGCTGATCCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS TCA 72 bp CTTCCTGCCTTTACTGTTGATGGATTTGGGGCTCTGTaGCAAAACCTGGGCTGGCTGTTGGGCTATGGCCTC +
Preference number: 6 (lower is better)
Translates to: LPAFTVDGFGAL*QNLGWLLGYGL
Trigger: GAGGCCATAGCCCAACAGCCAGCCCAGGTTTTGTCACAGAGCCCCAAATCCATCAACAGTAAAGGCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CCA 72 bp CAGTCTTTGAGCCTGGTGGCCTTGGGGCAGGAACTGTaGACAAGGATCTCTTCTGAAGCTGGAGTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: QSLSLVALGQEL*TRISSEAGVFC
Trigger: GCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTCCACAGTTCCTGCCCCAAGGCCACCAGGCTCAAAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS CCA 72 bp GATTTGGGGCTCTGTGACAAAACCTGGGCTGGCTGTTaGGCTATGGCCTCTGGGCTCTGTACAGATACTTCT +
Preference number: 6 (lower is better)
Translates to: DLGLCDKTWAGC*AMASGLCTDTS
Trigger: AGAAGTATCTGTACAGAGCCCAGAGGCCATAGCCCAACAGCCAGCCCAGGTTTTGTCACAGAGCCCCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CCA 72 bp TTACTGTTGATGGATTTGGGGCTCTGTGACAAAACCTaGGCTGGCTGTTGGGCTATGGCCTCTGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LLLMDLGLCDKT*AGCWAMASGLC
Trigger: ACAGAGCCCAGAGGCCATAGCCCAACAGCCAGCCCAGGTTTTGTCACAGAGCCCCAAATCCATCAACAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS TCA 72 bp TTGGGCTATGGCCTCTGGGCTCTGTACAGATACTTCTaGCTGGATGTCAGGATCAGCGATGTTCACCTTGCC +
Preference number: 6 (lower is better)
Translates to: LGYGLWALYRYF*LDVRISDVHLA
Trigger: GGCAAGGTGAACATCGCTGATCCTGACATCCAGTCAGAAGTATCTGTACAGAGCCCAGAGGCCATAGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS GCA 72 bp ACCAGAGTGGTGACAGGAAGCAGTGCCTGTCCTCTGTaGTACTTCTTCCAAGGTGGAAATGGGCTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: TRVVTGSSACPL*YFFQGGNGLFV
Trigger: GACAAACAGCCCATTTCCACCTTGGAAGAAGTAGCACAGAGGACAGGCACTGCTTCCTGTCACCACTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS GCA 72 bp TGGGCATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTaGATTGGGACAGTCATATGCACAGAACTACCACAC +
Preference number: 6 (lower is better)
Translates to: WACLRSSQRSSP*IGTVICTELPH
Trigger: GTGTGGTAGTTCTGTGCATATGACTGTCCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS CAA 72 bp TTCCACTTCCGCTTCCTGCCTTTACTGTTGATGGATTaGGGGCTCTGTGACAAAACCTGGGCTGGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: FHFRFLPLLLMD*GLCDKTWAGCW
Trigger: CCAACAGCCAGCCCAGGTTTTGTCACAGAGCCCCAAATCCATCAACAGTAAAGGCAGGAAGCGGAAGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS TCA 72 bp CCTTCTCATTCCACTTCCGCTTCCTGCCTTTACTGTTaGTGGATTTGGGGCTCTGTGACAAAACCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: PSHSTSASCLYC*WIWGSVTKPGL
Trigger: CAGCCCAGGTTTTGTCACAGAGCCCCAAATCCATCAACAGTAAAGGCAGGAAGCGGAAGTGGAATGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS GCA 72 bp TGTACAGAACTCAGTAGGCTCTGTTTTGGCATAGACTaGGTATTCTGCGTTGCAGCTCGACTCAGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: CTELSRLCFGID*VFCVAARLRWG
Trigger: TCCCCACCTGAGTCGAGCTGCAACGCAGAATACGCAGTCTATGCCAAAACAGAGCCTACTGAGTTCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230724.2
CDS CAA 72 bp CCCTTCTCATTCCACTTCCGCTTCCTGCCTTTACTGTaGATGGATTTGGGGCTCTGTGACAAAACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: PFSFHFRFLPLL*MDLGLCDKTWA
Trigger: AGCCCAGGTTTTGTCACAGAGCCCCAAATCCATCAACAGTAAAGGCAGGAAGCGGAAGTGGAATGAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
CDS CCA 72 bp ATGTCTGCGCAGTTCCCAAAGGTCTTCACCCTGCATTaGGACAGTCATATGCACAGAACTACCACACTTAGG +
Preference number: 6 (lower is better)
Translates to: MSAQFPKVFTLH*DSHMHRTTTLR
Trigger: CCTAAGTGTGGTAGTTCTGTGCATATGACTGTCCCAATGCAGGGTGAAGACCTTTGGGAACTGCGCAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230544.2
CDS GCA 72 bp CTGTGGACAAGGATCTCTTCTGAAGCTGGAGTTTTCTaGTCTGGGTTGGTCCAGTCTGTGTTGTGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: LWTRISSEAGVF*SGLVQSVLCFS
Trigger: TGAAAAACACAACACAGACTGGACCAACCCAGAGCAGAAAACTCCAGCTTCAGAAGAGATCCTTGTCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS CAA 72 bp AGGATCTCTTCTGAAGCTGGAGTTTTCTGCTCTGGGTaGGTCCAGTCTGTGTTGTGTTTTTCAGATTGGCTT +
Preference number: 6 (lower is better)
Translates to: RISSEAGVFCSG*VQSVLCFSDWL
Trigger: AAGCCAATCTGAAAAACACAACACAGACTGGACCAACCCAGAGCAGAAAACTCCAGCTTCAGAAGAGATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2
CDS TCA 72 bp TTGGTCCAGTCTGTGTTGTGTTTTTCAGATTGGCTTTaGGCCTCTTCCCATAGTCTTGTACAGAACTCAGTA +
Preference number: 6 (lower is better)
Translates to: LVQSVLCFSDWL*ASSHSLVQNSV
Trigger: TACTGAGTTCTGTACAAGACTATGGGAAGAGGCTCAAAGCCAATCTGAAAAACACAACACAGACTGGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000036852.9
ENSMUST00000230544.2
ENSMUST00000230724.2