Pregenerated sensors for RECQL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030243Ensembl transcript IDs: ENSMUST00000032370.13, ENSMUST00000100832.10, ENSMUST00000111803.9, ENSMUST00000123912.2, ENSMUST00000128082.2, ENSMUST00000129694.8, ENSMUST00000141504.8, ENSMUST00000203772.3
Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCGTGCTGGGTGGGTGGCTCCTGCTCCCCCTGTTGCCCTCAGCCTaGGAGGCTTCCCGGGAAGCTCTGCCTGTCCCTGTCTACACAGGC | + |
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Preference number: 1 (lower is better) Translates to: PVLGGWLLLPLLPSA*EASREALPVPVYTG Trigger: GCCTGTGTAGACAGGGACAGGCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR CCA 90 bp | CACTTCCAGGCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTaGGTGGGTGGCTCCTGCTCCCCCTGTTGCCCTCAGCCTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HFQAPSLAIRLAFPC*VGGSCSPCCPQPER Trigger: CCTCTCAGGCTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR GCA 90 bp | TATCACTTCCAGGCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTaGTGGGTGGGTGGCTCCTGCTCCCCCTGTTGCCCTCAGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: YHFQAPSLAIRLAFP*WVGGSCSPCCPQPE Trigger: CTCAGGCTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR CCA 90 bp | AGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCGCCATTCGCTTaGCCTTCCCGTGCTGGGTGGGTGGCTCCTGCTCCCCCTGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: SSADITSRPLHSPFA*PSRAGWVAPAPPVA Trigger: GGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR CCA 90 bp | CCAGGGGTGTGCACTCCGCAGCTCCTTTACCTTTCTGACAGAGCTTaGCATCCATCAGCACGTACAGGCCCGACTTGCTCACTAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PGVCTPQLLYLSDRA*HPSARTGPTCSLVK Trigger: TTTCACTAGTGAGCAAGTCGGGCCTGTACGTGCTGATGGATGCCAAGCTCTGTCAGAAAGGTAAAGGAGCTGCGGAGTGCACACCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR TCA 90 bp | GCTTCCCGGGAAGCTCTGCCTGTCCCTGTCTACACAGGCACCGTCTaGAGCCTGCTGACCAGTAGTTATTTTGCTTCCAGTTTTCTCACA | + |
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Preference number: 1 (lower is better) Translates to: ASREALPVPVYTGTV*SLLTSSYFASSFLT Trigger: TGTGAGAAAACTGGAAGCAAAATAACTACTGGTCAGCAGGCTTCAGACGGTGCCTGTGTAGACAGGGACAGGCAGAGCTTCCCGGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR GCA 90 bp | TTCTGGGACATTTGGATCTGTTCAGTAGGAGTCTGGCCAGGGGTGTaGACTCCGCAGCTCCTTTACCTTTCTGACAGAGCTTGGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: FWDIWICSVGVWPGV*TPQLLYLSDRAWHP Trigger: TGGATGCCAAGCTCTGTCAGAAAGGTAAAGGAGCTGCGGAGTGCACACCCCTGGCCAGACTCCTACTGAACAGATCCAAATGTCCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR TCA 90 bp | GACTGCTCTTCCACACGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCTCTTGTCTGGTGTGTCTGAAGGCAGCAACAGTGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: DCSSTRWLTTICNGI*CSCLVCLKAATVYS Trigger: TGAGTACACTGTTGCTGCCTTCAGACACACCAGACAAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCGTGTGGAAGAGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR GCA 90 bp | CAGGCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATaGAGGCCATTCTTGCTGACACACTTGGTGCTGAGGACTGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: QAAASGGCCRDLLRI*RPFLLTHLVLRTVL Trigger: TAAAACAGTCCTCAGCACCAAGTGTGTCAGCAAGAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR GCA 90 bp | TACAACGCACAAGGCCTGGGCGCAGACCATGAGTTGATGCTGAGGTaGACCAGAGGACAAGAGTATGTCAAAGTCGTTATGCAGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: YNAQGLGADHELMLR*TRGQEYVKVVMQNG Trigger: TCCATTCTGCATAACGACTTTGACATACTCTTGTCCTCTGGTGCACCTCAGCATCAACTCATGGTCTGCGCCCAGGCCTTGTGCGTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR TCA 90 bp | TTGAGGTCAGCATGTTTTCCACTTGAATTAAAACACAGCATTCCATaGTCAGGCCTGGTGTACTCCTGTGCTGAGGGCACTTTGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LRSACFPLELKHSIP*SGLVYSCAEGTLEG Trigger: CCCCTCCAAAGTGCCCTCAGCACAGGAGTACACCAGGCCTGATCATGGAATGCTGTGTTTTAATTCAAGTGGAAAACATGCTGACCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| 3UTR TCA 90 bp | AAGCTCTGCCTGTCCCTGTCTACACAGGCACCGTCTGAAGCCTGCTaGCCAGTAGTTATTTTGCTTCCAGTTTTCTCACAGTGTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: KLCLSLSTQAPSEAC*PVVILLPVFSQCSH Trigger: ATGTGAACACTGTGAGAAAACTGGAAGCAAAATAACTACTGGTCAGCAGGCTTCAGACGGTGCCTGTGTAGACAGGGACAGGCAGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR TCA 90 bp | TTGTCTCGGCCAATGGACCTTCAGAAAATAAAGTGGCCTTCCTTCTaGAGCCGTCTGTCTTCTCGCCGTTCCTGTAACATTCACATGACG | + |
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Preference number: 1 (lower is better) Translates to: LSRPMDLQKIKWPSF*SRLSSRRSCNIHMT Trigger: CGTCATGTGAATGTTACAGGAACGGCGAGAAGACAGACGGCTTCAGAAGGAAGGCCACTTTATTTTCTGAAGGTCCATTGGCCGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR TCA 90 bp | TTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCTGGCTAAATaGTATCTAACTGGGGATAGGAATGACATGAAATCACTGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: FETSRFKWVGGELAK*YLTGDRNDMKSLLL Trigger: CAGGAGCAGTGATTTCATGTCATTCCTATCCCCAGTTAGATATCATTTAGCCAGCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR CCA 90 bp | TCCATGAGAAATACAGCACTGGCTACCGATGAGTCCAGCTGTCTGTaGCAGCTTTTCTACTTTAAATTGAAGCCACTGGAGCCAATTTCT | + |
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Preference number: 1 (lower is better) Translates to: SMRNTALATDESSCL*QLFYFKLKPLEPIS Trigger: AGAAATTGGCTCCAGTGGCTTCAATTTAAAGTAGAAAAGCTGCCACAGACAGCTGGACTCATCGGTAGCCAGTGCTGTATTTCTCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR GCA 90 bp | AATAAAGAGAAAAGAAAGTACATGGGGAAACATAACCACACGGAGTaGATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTT | + |
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Preference number: 1 (lower is better) Translates to: NKEKRKYMGKHNHTE*MGTQVENADTRLDV Trigger: AACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGTGTGGTTATGTTTCCCCATGTACTTTCTTTTCTCTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR TCA 90 bp | CAGGCCATTCTTGCTGACACACTTGGTGCTGAGGACTGTTTTATCTaGATTATAACAGCAACTCTTCTCACTAGAAGTCATCTACATTGC | + |
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Preference number: 1 (lower is better) Translates to: QAILADTLGAEDCFI*IITATLLTRSHLHC Trigger: GCAATGTAGATGACTTCTAGTGAGAAGAGTTGCTGTTATAATTCAGATAAAACAGTCCTCAGCACCAAGTGTGTCAGCAAGAATGGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR TCA 90 bp | GTCACCCCAAACGTACACCCTTTTCTTCATAGAAACAATGTAAGGTaGATTCTTTCCACTTGCCTATTTCTTATAGTCCTCATCTTTATC | + |
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Preference number: 1 (lower is better) Translates to: VTPNVHPFLHRNNVR*ILSTCLFLIVLIFI Trigger: GATAAAGATGAGGACTATAAGAAATAGGCAAGTGGAAAGAATTCACCTTACATTGTTTCTATGAAGAAAAGGGTGTACGTTTGGGGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR GCA 90 bp | TATGACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATaGCATTTAAATGCTTTCATTGGACCCCTCCCACTATATAACTGT | + |
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Preference number: 1 (lower is better) Translates to: YDCRLCGSIIYRVYS*HLNAFIGPLPLYNC Trigger: ACAGTTATATAGTGGGAGGGGTCCAATGAAAGCATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR CCA 90 bp | CCCATAGCCAACAGGCTTGTATCCAGGATAGCTATGAATGTAGCCTaGTATAAAGCTTTGAACTTAGTTAAATATTATGAAGTGTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: PIANRLVSRIAMNVA*YKALNLVKYYEVFV Trigger: CACAAACACTTCATAATATTTAACTAAGTTCAAAGCTTTATACCAGGCTACATTCATAGCTATCCTGGATACAAGCCTGTTGGCTATGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCCCCTGTTGCCCTCAGCCTGAGAGGCTTCCCGGGAAGCTCTGCCTGTCCGCACTCTTCTGGACATaGCCAGAGCTCATGCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: CSPCCPQPERLPGKLCLSALFWT*PELMPA Trigger: TGCGGGCATGAGCTCTGGGCATGTCCAGAAGAGTGC...GGACAGGCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR CAA 90 bp | AAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCGCCATTCGCTaGGCCTTCCCGTGCTGGGTGGGTGGCTCCTGCTCCCCCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: KLCRYHFQAPSLAIR*AFPCWVGGSCSPCC Trigger: GCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGACCACACTGAAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCGCCTTGGCCTTCCCGTGCTaGGTGGGTGGCTCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RGTTLKLCRYHFQAPSLALAFPC*VGGSCS Trigger: GGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAA...GGCGAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGACCACACTGAAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCGCCTCCTGCTCCCCCTGTTaGCCTCAGCCTGAGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: RGTTLKLCRYHFQAPSLASCSPC*PQPERL Trigger: AAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCAGGA...GGCGAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCCCCTGTTGCCCTCAGCCTGAGAGGCTTCCCGGGAAGCTCTGCCTGTCCCCGTCTGAAGCCTGCTaGCCAGTAGTTATTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: CSPCCPQPERLPGKLCLSPSEAC*PVVILL Trigger: AAGCAAAATAACTACTGGTCAGCAGGCTTCAGACGG...GGACAGGCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGAACGTCAAAGTCAGGCTaGGGCCTCAGGAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TECMGTQVENADTRLDVGTSKSG*GLRRLL Trigger: CAGCAGCCTCCTGAGGCCGCAGCCTGACTTTGACGT...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGCAAACACGGCTGCCTaGTGTTTCCTCATTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ESFSKHGCLLFPHCSLLIANTAA*CFLIAP Trigger: GGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGC...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATACAGCAGTTGAGAGACTaGTCTTCCACACGGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: ESFSKHGCLLFPHCSLLIQQLRD*SSTRWL Trigger: GAGCCACCGTGTGGAAGAGCAGTCTCTCAACTGCTG...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGGGGACCACACTGAAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCAGGGAGTCTGAACAGTaGGGAAAAACATCAACAAGA | + |
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Preference number: 2 (lower is better) Translates to: ARGTTLKLCRYHFQAPSLRESEQ*GKTSTR Trigger: TCTTGTTGATGTTTTTCCTCACTGTTCAGACTCCCT...GAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCACAAGAAAAAGTAGGTaGGCTGGAGAGGTAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QTRLPAVSSLLPSDRAHGTRKSR*AGEVAQ Trigger: CTGAGCTACCTCTCCAGCCCACCTACTTTTTCTTGT...GCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGACTGTTGCCCTCAGCCTaGGAGGCTTCCCGGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FGRIWTIITQPSQSVFHRLLPSA*EASREA Trigger: AGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAG...TCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAAGGAAAGCCTTCCCGTGCTGGGTaGGTGGCTCCTGCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LFQRTTISQLQLIKVKGKPSRAG*VAPAPP Trigger: AGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGG...CTTTCCTTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCCAGCCGAGTCCAGTCTaGCAGCAGGTGAGCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: QICVFILKLPGLSGWEGSQPSPV*QQVSLH Trigger: GTGCAGGCTCACCTGCTGCCAGACTGGACTCGGCTG...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR CAA 90 bp | ACATCAACAAGAAAAAGTAGGTGGGCTGGAGAGGTAGCTCAGCAGTaGAGAGACTGCTCTTCCACACGGTGGCTCACAACCATCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: TSTRKSRWAGEVAQQ*RDCSSTRWLTTICN Trigger: ATTACAGATGGTTGTGAGCCACCGTGTGGAAGAGCAGTCTCTCAACTGCTGAGCTACCTCTCCAGCCCACCTACTTTTTCTTGTTGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGGGATAGGAATGACATaGAATCACTGCTCCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: ESFSKHGCLLFPHCSLLIGIGMT*NHCSWI Trigger: AATCCAGGAGCAGTGATTTCATGTCATTCCTATCCC...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCTCCTGCTCCCCCTGTTaGCCTCAGCCTGAGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QICVFILKLPGLSGWEGSSCSPC*PQPERL Trigger: AAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCAGGA...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | ACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCCGTCTGAAGCCTGCTaGCCAGTAGTTATTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: TSPEGFKSPSANTAACCFPSEAC*PVVILL Trigger: AAGCAAAATAACTACTGGTCAGCAGGCTTCAGACGG...GAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCTGTAACCCAAGATGGCAGCAACACGTGATTTACAGTATTCTCTTCTACGAGGTCCTGCGGCTGTaGTATGCTCTGCCTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: ISCNPRWQQHVIYSILFYEVLRL*YALPGL Trigger: TAGACCAGGCAGAGCATAGCACAGCCGCAGGACCTC...GTAGAAGAGAATACTGTAAATCACGTGTTGCTGCCATCTTGGGTTACAGCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCAAAATGACCCAGACATaGACATACAGAACAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: AAASGGCCRDLLRICRPFKMTQT*TYRTVT Trigger: TGTAACTGTTCTGTATGTTCATGTCTGGGTCATTTT...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR-3UTR TCA 90 bp | CAAATCTTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTCTCAGCTCTCCAGTGTaGGTTCTGGAGACGTATCCG | + |
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Preference number: 2 (lower is better) Translates to: QIFGRIWTIITQPSQSVFLSSPV*VLETYP Trigger: CGGATACGTCTCCAGAACTCACACTGGAGAGCTGAG...AAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAAGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGTCTGACAAGAAAAAGTAGGTaGGCTGGAGAGGTAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VVFQLFVQKEMVEFTGSLTRKSR*AGEVAQ Trigger: CTGAGCTACCTCTCCAGCCCACCTACTTTTTCTTGT...CAGACTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCATTTCATATAAAATTTaGCCTAACTACAGGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QTRLPAVSSLLPSDRAHGISYKI*PNYRPS Trigger: TGAGGGCCTGTAGTTAGGCCAAATTTTATATGAAAT...GCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGAGATTTACTTAGAATATaGAGGCCATTCTTGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: TECMGTQVENADTRLDVGDLLRI*RPFLLT Trigger: TGTCAGCAAGAATGGCCTGCATATTCTAAGTAAATC...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAAGGAAAGCCAGGTTTAAGTGGGTaGGAGGGGAGCTGGCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LFQRTTISQLQLIKVKGKPGLSG*EGSWLN Trigger: ATTTAGCCAGCTCCCCTCCCACCCACTTAAACCTGG...CTTTCCTTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| 3UTR-3UTR TCA 90 bp | ACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCGGATTAAGCACTGAGTaGCATGAAGTGTTAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TSPEGFKSPSANTAACCFGLSTE*HEVLIK Trigger: TTTGATTAACACTTCATGTCACTCAGTGCTTAATCC...GAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTTTTCACATCCCAATTTaGTTTACATCACGCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: PEGFKSPSANTAACCFLIFHIPI*FTSRTM Trigger: CATTGTGCGTGATGTAAAGCAAATTGGGATGTGAAA...AATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACAAAACAGCTTTCATAAGTACCATGCCTTCTTCATTAAAAAGCCTGTGTGTGTGCTATGCTCTGCCTaGTCTAGAGCAGAGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KQNSFHKYHAFFIKKPVCVLCSA*SRAEPE Trigger: CTCAGGCTCTGCTCTAGACCAGGCAGAGCATAGCAC...ACACACAGGCTTTTTAATGAAGAAGGCATGGTACTTATGAAAGCTGTTTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGCGGCCTCAGGAGGCTaGTGTCGTGATTTACTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNAASGG*CRDLLR Trigger: TCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR-3UTR TCA 90 bp | GACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGAGGGAGTCTGAACAGTaGGGAAAAACATCAACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: DHHNPTQSVSISQIKTKQRESEQ*GKTSTR Trigger: TCTTGTTGATGTTTTTCCTCACTGTTCAGACTCCCT...CTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGAATTTCATATAAAATTTaGCCTAACTACAGGCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FGRIWTIITQPSQSVFHRISYKI*PNYRPS Trigger: TGAGGGCCTGTAGTTAGGCCAAATTTTATATGAAAT...TCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATAAAATGTCACCCATTTaGAAAGGAGAGCCCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNKMSPI*KGEPMS Trigger: TGACATGGGCTCTCCTTTCCAAATGGGTGACATTTT...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATAGAAAAGAAAGTACATaGGGAAACATAACCACACGG | + |
|
Preference number: 2 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNRKEST*GNITTR Trigger: CCGTGTGGTTATGTTTCCCCATGTACTTTCTTTTCT...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR-3UTR CCA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTATTATTCCAAATCTCCTaGTTTCACATCCCAATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LFCFQFSHSVHIETRCEVLFQIS*FHIPIC Trigger: GCAAATTGGGATGTGAAACCAGGAGATTTGGAATAA...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | TTCCCGTGCTGGGTGGGTGGCTCCTGCTCCCCCTGTTaGCCTCAGCCTGAGAGGCTTCCCGGGAAGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FPCWVGGSCSPC*PQPERLPGKLC Trigger: GCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | GCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTaGGTGGGTGGCTCCTGCTCCCCCTGTTGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: APSLAIRLAFPC*VGGSCSPCCPQ Trigger: CTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | ATTCGCTTGGCCTTCCCGTGCTGGGTGGGTGGCTCCTaGTCCCCCTGTTGCCCTCAGCCTGAGAGGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IRLAFPCWVGGS*SPCCPQPERLP Trigger: GGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | CTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTGGGTaGGTGGCTCCTGCTCCCCCTGTTGCCCTCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LHSPFAWPSRAG*VAPAPPVALSL Trigger: CAGGCTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | GATATCACTTCCAGGCCCCTTCACTCGCCATTCGCTTaGCCTTCCCGTGCTGGGTGGGTGGCTCCTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DITSRPLHSPFA*PSRAGWVAPAP Trigger: GGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGATATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | TGTTGCCCTCAGCCTGAGAGGCTTCCCGGGAAGCTCTaGCTGTCCCTGTCTACACAGGCACCGTCTGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CCPQPERLPGKL*LSLSTQAPSEA Trigger: GGCTTCAGACGGTGCCTGTGTAGACAGGGACAGGCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR TCA 72 bp | GCCAGGGGTGTGCACTCCGCAGCTCCTTTACCTTTCTaGCAGAGCTTGGCATCCATCAGCACGTACAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ARGVHSAAPLPF*QSLASISTYRP Trigger: GGGCCTGTACGTGCTGATGGATGCCAAGCTCTGTCAGAAAGGTAAAGGAGCTGCGGAGTGCACACCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | ACTCTTCTGGACATGCCCAGAGCTCATGCCCGCAGCTaGGAGGTGTACACGAGGTCAACGCTAGGTACACCC | + |
|
Preference number: 3 (lower is better) Translates to: TLLDMPRAHARS*EVYTRSTLGTP Trigger: GGGTGTACCTAGCGTTGACCTCGTGTACACCTCCCAGCTGCGGGCATGAGCTCTGGGCATGTCCAGAAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | TCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTaGTCCCTTCTGATAGAGCACACGGCCAGGGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SFSKHGCLLFPH*SLLIEHTARGT Trigger: GGTCCCCCTGGCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | ATAGAGCACACGGCCAGGGGGACCACACTGAAGCTCTaGAGATATCACTTCCAGGCCCCTTCACTCGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: IEHTARGTTLKL*RYHFQAPSLAI Trigger: AATGGCGAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCTGGCCGTGTGCTCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | TGCACTCCGCAGCTCCTTTACCTTTCTGACAGAGCTTaGCATCCATCAGCACGTACAGGCCCGACTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CTPQLLYLSDRA*HPSARTGPTCS Trigger: TGAGCAAGTCGGGCCTGTACGTGCTGATGGATGCCAAGCTCTGTCAGAAAGGTAAAGGAGCTGCGGAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTTCCAGGCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTGGGTGGGGTTTCACATCCCAATTaGCTTTACATCACGCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLPGPFTRHSLGLPVLGGVSHPN*LYITHN Trigger: ATTGTGCGTGATGTAAAGCAAATTGGGATGTGAAAC...CCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR TCA 72 bp | GAAGCTCTGCCTGTCCCTGTCTACACAGGCACCGTCTaGAGCCTGCTGACCAGTAGTTATTTTGCTTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EALPVPVYTGTV*SLLTSSYFASS Trigger: ACTGGAAGCAAAATAACTACTGGTCAGCAGGCTTCAGACGGTGCCTGTGTAGACAGGGACAGGCAGAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | CCTGAACGTCAAAGTCAGGCTGCGGCCTCAGGAGGCTaGTGTCGTGATTTACTTAGAATATGCAGGCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: PERQSQAAASGG*CRDLLRICRPF Trigger: GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGCCTGACTTTGACGTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR GCA 72 bp | CAAGGCCTGGGCGCAGACCATGAGTTGATGCTGAGGTaGACCAGAGGACAAGAGTATGTCAAAGTCGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: QGLGADHELMLR*TRGQEYVKVVM Trigger: CATAACGACTTTGACATACTCTTGTCCTCTGGTGCACCTCAGCATCAACTCATGGTCTGCGCCCAGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR GCA 72 bp | ATTTGGATCTGTTCAGTAGGAGTCTGGCCAGGGGTGTaGACTCCGCAGCTCCTTTACCTTTCTGACAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IWICSVGVWPGV*TPQLLYLSDRA Trigger: AGCTCTGTCAGAAAGGTAAAGGAGCTGCGGAGTGCACACCCCTGGCCAGACTCCTACTGAACAGATCCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | AGATTCTGGGACATTTGGATCTGTTCAGTAGGAGTCTaGCCAGGGGTGTGCACTCCGCAGCTCCTTTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RFWDIWICSVGV*PGVCTPQLLYL Trigger: AAGGTAAAGGAGCTGCGGAGTGCACACCCCTGGCCAGACTCCTACTGAACAGATCCAAATGTCCCAGAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR TCA 72 bp | TCCACACGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCTCTTGTCTGGTGTGTCTGAAGGCAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: STRWLTTICNGI*CSCLVCLKAAT Trigger: TGTTGCTGCCTTCAGACACACCAGACAAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCGTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | GCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATaGAGGCCATTCTTGCTGACACACTTGGTGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASGGCCRDLLRI*RPFLLTHLVLR Trigger: CCTCAGCACCAAGTGTGTCAGCAAGAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR CCA 72 bp | TGTTGGGTGTTTCTGAGGTTGAGATTCTGGGACATTTaGATCTGTTCAGTAGGAGTCTGGCCAGGGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CWVFLRLRFWDI*ICSVGVWPGVC Trigger: GCACACCCCTGGCCAGACTCCTACTGAACAGATCCAAATGTCCCAGAATCTCAACCTCAGAAACACCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | TGTTCTGCTGATTGGGGCTGGGTACACACTGACTGTTaGGTGTTTCTGAGGTTGAGATTCTGGGACATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSADWGWVHTDC*VFLRLRFWDIW Trigger: CCAAATGTCCCAGAATCTCAACCTCAGAAACACCCAACAGTCAGTGTGTACCCAGCCCCAATCAGCAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTTTAACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCGAGGTAGCTCAGCAGTaGAGAGACTGCTCTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: CTLTSPEGFKSPSANTAAEVAQQ*RDCSST Trigger: TGTGGAAGAGCAGTCTCTCAACTGCTGAGCTACCTC...GGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGTTAAAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | CACACTGACTGTTGGGTGTTTCTGAGGTTGAGATTCTaGGACATTTGGATCTGTTCAGTAGGAGTCTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HTDCWVFLRLRF*DIWICSVGVWP Trigger: TGGCCAGACTCCTACTGAACAGATCCAAATGTCCCAGAATCTCAACCTCAGAAACACCCAACAGTCAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR CCA 72 bp | AATACAGCACTGGCTACCGATGAGTCCAGCTGTCTGTaGCAGCTTTTCTACTTTAAATTGAAGCCACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NTALATDESSCL*QLFYFKLKPLE Trigger: CTCCAGTGGCTTCAATTTAAAGTAGAAAAGCTGCCACAGACAGCTGGACTCATCGGTAGCCAGTGCTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGAACTGCTCCTGGATTCTaGGGTCTCCTAAGATTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FGRIWTIITQPSQSVFHRTAPGF*GLLRLH Trigger: GTGCAATCTTAGGAGACCCAAGAATCCAGGAGCAGT...TCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR TCA 72 bp | TCCAGGTTTAAGTGGGTGGGAGGGGAGCTGGCTAAATaGTATCTAACTGGGGATAGGAATGACATGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SRFKWVGGELAK*YLTGDRNDMKS Trigger: TGATTTCATGTCATTCCTATCCCCAGTTAGATATCATTTAGCCAGCTCCCCTCCCACCCACTTAAACCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGGCGCAGACCATGAGTaGATGCTGAGGTGCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNGADHE*MLRCTR Trigger: TCTGGTGCACCTCAGCATCAACTCATGGTCTGCGCC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR CCA 72 bp | TTTAGCTTTTCAAGTCTTAAAGGATGTTCTGCTGATTaGGGCTGGGTACACACTGACTGTTGGGTGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSFSSLKGCSAD*GWVHTDCWVFL Trigger: CAGAAACACCCAACAGTCAGTGTGTACCCAGCCCCAATCAGCAGAACATCCTTTAAGACTTGAAAAGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAATTTGGCCTAACTACAGGCCCTCATTTCACTAATTCCATGTTATGCAACGAGGTAGCTCAGCAGTaGAGAGACTGCTCTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: IKFGLTTGPHFTNSMLCNEVAQQ*RDCSST Trigger: TGTGGAAGAGCAGTCTCTCAACTGCTGAGCTACCTC...GTTGCATAACATGGAATTAGTGAAATGAGGGCCTGTAGTTAGGCCAAATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR TCA 72 bp | AAAGGAGATGGTAGAGTTCACAGGGAGTCTGAACAGTaGGGAAAAACATCAACAAGAAAAAGTAGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGDGRVHRESEQ*GKTSTRKSRWA Trigger: AGCCCACCTACTTTTTCTTGTTGATGTTTTTCCTCACTGTTCAGACTCCCTGTGAACTCTACCATCTCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | CCCTTATTCCAAATCTCCTGGTTTCACATCCCAATTTaGTTTACATCACGCACAATGCAGACTAAAGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLFQISWFHIPI*FTSRTMQTKGV Trigger: AACTCCTTTAGTCTGCATTGTGCGTGATGTAAAGCAAATTGGGATGTGAAACCAGGAGATTTGGAATAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| 3UTR GCA 72 bp | AGGCTATGTGGCAGTATTATCTACAGAGTATATTCATaGCATTTAAATGCTTTCATTGGACCCCTCCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: RLCGSIIYRVYS*HLNAFIGPLPL Trigger: TAGTGGGAGGGGTCCAATGAAAGCATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATTCATTGTGCTGCAGGTaGTATTGCTGGGAAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNSLCCR*YCWENT Trigger: TGTATTTTCCCAGCAATACAACCTGCAGCACAATGA...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR CCA 72 bp | ACTTTCCATTTTACTTGTCAAATCTTTGGTAGGATTTaGACCATCATAACCCAACCCAGTCAGTCAGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TFHFTCQIFGRI*TIITQPSQSVF Trigger: AAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAAGATTTGACAAGTAAAATGGAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CAA 72 bp | AGATATCACTTCCAGGCCCCTTCACTCGCCATTCGCTaGGCCTTCCCGTGCTGGGTGGGTGGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RYHFQAPSLAIR*AFPCWVGGSCS Trigger: GGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGATATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACGGCTGCATGAGAGCCTaGGCTTTGCTCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDGCMRA*ALLFPL Trigger: AAGGGGGAAGAGCAAAGCTCAGGCTCTCATGCAGCC...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACAGGACTGACTTTCTCTaGAGGAGCTCTTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHRTDFL*RSSCRL Trigger: GAGGCGGCAAGAGCTCCTTCAGAGAAAGTCAGTCCT...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | TCACTTCCAGGCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTGGGTGGGTTTCCCTGTCAGGACTaGCTTTCTCTGAAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPFTRHSLGLPVLGGFPCQD*LSLKEL Trigger: GAGCTCCTTCAGAGAAAGTCAGTCCTGACAGGGAAA...CCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAGTTGCCACTACCACCTaGAGCTCATTGGCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRVATTT*SSLADH Trigger: GTGGTCAGCCAATGAGCTTCAGGTGGTAGTGGCAAC...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | CGCTTGGCCTTCCCGTGCTGGGTGGGTGGCTCCTGCTCCCCCTGTTGCCCTCAGTATTGGCATGGTAAGTaGCTGCATGAATTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RLAFPCWVGGSCSPCCPQYWHGK*LHEFPT Trigger: AGTTGGGAATTCATGCAGGCACTTACCATGCCAATA...CTGAGGGCAACAGGGGGAGCAGGAGCCACCCACCCAGCACGGGAAGGCCAAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTCTTTGAGATATTGCTaGAGGAGGGCGTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHSLRYC*RRAWAT Trigger: CGTCGCCCACGCCCTCCTGCAGCAATATCTCAAAGA...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR CCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACAGCCACTCTCAACTTaGCTGCTCCCTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRQPLST*LLPFPS Trigger: GGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTG...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACGCCAAATGCGACTGTTaGCACTACCACCTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDAKCDC*HYHLKL Trigger: GAGCTTCAGGTGGTAGTGGCAACAGTCGCATTTGGC...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACTCATACAGCTTCTGCTaGCCCACGTTCTCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDSYSFC*PTFSMT Trigger: GGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGA...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | TCCCCCTGTTGCCCTCAGCCTGAGAGGCTTCCCGGGAAGCTCTGCCTGTCCCTGTTCAGGCCTTCAGCCTaGTTCAGAATCTTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPCCPQPERLPGKLCLSLFRPSA*FRIFIR Trigger: CCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAA...CAGGGACAGGCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACCACTCTCAACTTGGCTaGTCCCTTTCCCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHHSQLG*SLSHPS Trigger: GCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTG...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACTGGATGTCAATGGCATaGAGCTCACTGGCTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDWMSMA*SSLATD Trigger: ATCCGTAGCCAGTGAGCTTCATGCCATTGACATCCA...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTTTCCCTGTCAGGACTaGCTTTCTCTGAAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHFPCQD*LSLKEL Trigger: GAGCTCCTTCAGAGAAAGTCAGTCCTGACAGGGAAA...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACCTTATAATCAGGCCTaGAGTCATGACCCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRPYNQA*SHDPTD Trigger: GTCAGTGGGGTCATGACTTCAGGCCTGATTATAAGG...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAAAAGTCTTCAGCACTTaGGGGCTTTTGCCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRKVFST*GLLPNL Trigger: GAGGTTCGGCAAAAGCCCTCAAGTGCTGAAGACTTT...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACCATGACCCCACTGACTaGAGCAATGCACTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHHDPTD*SNALHP Trigger: TGGATGAAGTGCATTGCTGCAGTCAGTGGGGTCATG...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACAGAACATGGTTGGTTaGTGTTGCAGTCAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRQNMVG*CCSQPH Trigger: ATGGGGCTGACTGCAACAGCAACCAACCATGTTCTG...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAATCTCATACAGCTTCTaGTGCCCCACGTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRISYSF*CPTFSM Trigger: CATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGAT...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACCCTTCAGAACATGGTTaGTTGCTGTTGCAGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDPSEHG*LLLQSA Trigger: GGCTGACTGCAACAGCAACCAACCATGTTCTGAAGG...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GCCAGGGGGACCACACTGAAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCAAAGTCTTCAGCACTTaGGGGCTTTTGCCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARGTTLKLCRYHFQAPSLKVFST*GLLPNL Trigger: GAGGTTCGGCAAAAGCCCTCAAGTGCTGAAGACTTT...GAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACAGCTGTAGTCTTCTTTaGGATATTGCTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHSCSLL*DIAAGG Trigger: CCCTCCTGCAGCAATATCTCAAAGAAGACTACAGCT...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACAACGCTGCTCTGTGCTaGCTTCTTCACTTGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDNAALC*LLHLHS Trigger: ACTATGCAAGTGAAGAAGTCAGCACAGAGCAGCGTT...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | TCACTTCCAGGCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTGGGTGGGTTCACCATTTCAGCGTaGACCCATTTTACATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGPFTRHSLGLPVLGGFTISA*THFTCS Trigger: GGAACATGTAAAATGGGTGCACGCTGAAATGGTGAA...CCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAGGCATGGTAAGTGCCTaGATGAATTCCCAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRGMVSA*MNSQLL Trigger: CAGAAGTTGGGAATTCATGCAGGCACTTACCATGCC...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAAATTCCCATGCCAAATaGGACTGTTGCCACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRNSHAK*DCCHYH Trigger: GTGGTAGTGGCAACAGTCGCATTTGGCATGGGAATT...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACGACAAACCTCACGTCTaGCTTATCAATTCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDDKPHV*LINSHA Trigger: GGCATGGGAATTGATAAGCCAGACGTGAGGTTTGTC...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACGCTGACCACTGTGTATaGACCTTGGTCTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHADHCV*TLVLSS Trigger: AGAAGATAAGACCAAGGTTCATACACAGTGGTCAGC...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTCATTGAATGATGGATaGCAAACCTCACGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHSLNDG*QTSRLA Trigger: AGCCAGACGTGAGGTTTGTCATCCATCATTCAATGA...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACGACATTCTGGCAGTATaGCACCATCTCATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHDILAV*HHLIQL Trigger: AAGCTGTATGAGATGGTGTCATACTGCCAGAATGTC...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | AGGGGGACCACACTGAAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCGCCAGCTGTAGTCTTCTTTaGGATATTGCTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTTLKLCRYHFQAPSLASCSLL*DIAAGG Trigger: CCCTCCTGCAGCAATATCTCAAAGAAGACTACAGCT...GGCGAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGGGGACCACACTGAAGCTCTGCAGATATCACTTCCAGGCCCCTTCACTCAACGCTGCTCTGTGCTaGCTTCTTCACTTGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARGTTLKLCRYHFQAPSLNAALC*LLHLHS Trigger: ACTATGCAAGTGAAGAAGTCAGCACAGAGCAGCGTT...GAGTGAAGGGGCCTGGAAGTGATATCTGCAGAGCTTCAGTGTGGTCCCCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTGGCGCTTCAAGATaGCAAGAGCCTTATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDTGASR*QEPYNQ Trigger: CTGATTATAAGGCTCTTGGCATCTTGAAGCGCCAGT...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACGCTTATCAATTCCCATaGCAAATGCGACTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDAYQFP*QMRLLP Trigger: TGGCAACAGTCGCATTTGGCATGGGAATTGATAAGC...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGATTCAGGCCTTCAGCCTaGTTCAGAATCTTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRFRPSA*FRIFIR Trigger: CCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAA...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | CAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCGGTGTGTCTGAGCTTTaGTCTTCCCCCTTCGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QTRLPAVSSLLPSDRAHGGVSEL*SSPFES Trigger: GGATTCGAAGGGGGAAGAGCAAAGCTCAGACACACC...GCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCCAGGGGGACCACACTGCCTTCAGAACATGGTTaGTTGCTGTTGCAGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPHCSLLIEHTARGTTLPSEHG*LLLQSA Trigger: GGCTGACTGCAACAGCAACCAACCATGTTCTGAAGG...CAGTGTGGTCCCCCTGGCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACATCCTTCAGAACATaGTTGGTTGCTGTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDTSFRT*LVAVAV Trigger: GACTGCAACAGCAACCAACCATGTTCTGAAGGATGT...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACCACTTGCTGACATTCTaGCAGTATGACACCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDHLLTF*QYDTIS Trigger: TGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTG...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| 3UTR CAA 72 bp | AGAAAAAGTAGGTGGGCTGGAGAGGTAGCTCAGCAGTaGAGAGACTGCTCTTCCACACGGTGGCTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: RKSRWAGEVAQQ*RDCSSTRWLTT Trigger: GGTTGTGAGCCACCGTGTGGAAGAGCAGTCTCTCAACTGCTGAGCTACCTCTCCAGCCCACCTACTTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGAAGGACTGACTTTCTCTaGAGGAGCTCTTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLQQTRLPAVSSLLPSDRRTDFL*RSSCRL Trigger: GAGGCGGCAAGAGCTCCTTCAGAGAAAGTCAGTCCT...TCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACGGCTTTCTCCAGTCTTaGCATGAACATCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDGFLQS*HEHLAF Trigger: AAAAGCAAGATGTTCATGTCAAGACTGGAGAAAGCC...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACGATTTGCTCATTGAATaGTGGATGACAAACCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDDLLIE*WMTNLT Trigger: CGTGAGGTTTGTCATCCATCATTCAATGAGCAAATC...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | CTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCCAGGGGGACCACACTGAACGCTGCTCTGTGCTaGCTTCTTCACTTGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPHCSLLIEHTARGTTLNAALC*LLHLHS Trigger: ACTATGCAAGTGAAGAAGTCAGCACAGAGCAGCGTT...CAGTGTGGTCCCCCTGGCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACTTCACCATTTCAGCGTaGACCCATTTTACATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDFTISA*THFTCS Trigger: GGAACATGTAAAATGGGTGCACGCTGAAATGGTGAA...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACTATTGGCATGGTAAGTaGCTGCATGAATTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDYWHGK*LHEFPT Trigger: AGTTGGGAATTCATGCAGGCACTTACCATGCCAATA...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCGCCAAATGCGACTGTTaGCACTACCACCTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAASGGCCRDLLRICRPFAKCDC*HYHLKL Trigger: GAGCTTCAGGTGGTAGTGGCAACAGTCGCATTTGGC...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCTCATACAGCTTCTGCTaGCCCACGTTCTCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: AAASGGCCRDLLRICRPFSYSFC*PTFSMT Trigger: GGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGA...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | CAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCATCTCATACAGCTTCTaGTGCCCCACGTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTRLPAVSSLLPSDRAHGISYSF*CPTFSM Trigger: CATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGAT...GCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATCTTTGAGATATTGCTaGAGGAGGGCGTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGSLRYC*RRAWAT Trigger: CGTCGCCCACGCCCTCCTGCAGCAATATCTCAAAGA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATATCATACAGCTTCTGCTaGCCCACGTTCTCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: ESFSKHGCLLFPHCSLLISYSFC*PTFSMT Trigger: GGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGA...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACCACACTTCATCAAAATaGTGTGCTATTAACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHHTSSK*CAINTR Trigger: CCGTGTGTTAATAGCACAGCATTTTGATGAAGTGTG...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTTTGTTACAGGCATCTaGGTTCCACACTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHFVTGI*VPHFIK Trigger: TTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAA...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | CTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCCAGGGGGACCACACTGTTCAGGCCTTCAGCCTaGTTCAGAATCTTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPHCSLLIEHTARGTTLFRPSA*FRIFIR Trigger: CCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAA...CAGTGTGGTCCCCCTGGCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACCTTGGTCTTATCTTCTaGTTCCATATTGGCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHLGLIF*FHIGMV Trigger: TACCATGCCAATATGGAACCAGAAGATAAGACCAAG...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR CCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAACTGTGTATGAACCTTaGTCTTATCTTCTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRTVYEP*SYLLVP Trigger: TGGAACCAGAAGATAAGACCAAGGTTCATACACAGT...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATGGATGTCAATGGCATaGAGCTCACTGGCTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGWMSMA*SSLATD Trigger: ATCCGTAGCCAGTGAGCTTCATGCCATTGACATCCA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACTTTAAAACCATCAGCTaGTCTTCCATAAGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RALWRGDRKIRTSRPSPDFKTIS*SSIREM Trigger: CATCTCTCTTATGGAAGATCAGCTGATGGTTTTAAA...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACGAGAGAAACAGTATATaGTTCCTGATTGTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHERNSI*FLIVLC Trigger: ACAAAGGACAATCAGGAATCATATACTGTTTCTCTC...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAGACATGACCCCACTGACTaGAGCAATGCACTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQQTRLPAVSSLLPSDRHDPTD*SNALHP Trigger: TGGATGAAGTGCATTGCTGCAGTCAGTGGGGTCATG...TCTATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGACATGACCCCACTGACTaGAGCAATGCACTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGHDPTD*SNALHP Trigger: TGGATGAAGTGCATTGCTGCAGTCAGTGGGGTCATG...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGACAGAACATGGTTGGTTaGTGTTGCAGTCAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGQNMVG*CCSQPH Trigger: ATGGGGCTGACTGCAACAGCAACCAACCATGTTCTG...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGAATCTCATACAGCTTCTaGTGCCCCACGTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGISYSF*CPTFSM Trigger: CATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGAT...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTCAGCCACTCTCAACTTaGCTGCTCCCTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PEGFKSPSANTAACCFLIQPLST*LLPFPS Trigger: GGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTG...AATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CAA 72 bp | CTGTTGGGTGTTTCTGAGGTTGAGATTCTGGGACATTaGGATCTGTTCAGTAGGAGTCTGGCCAGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVSEVEILGH*DLFSRSLARGV Trigger: CACACCCCTGGCCAGACTCCTACTGAACAGATCCAAATGTCCCAGAATCTCAACCTCAGAAACACCCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGGTTGCCACTACCACCTaGAGCTCATTGGCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCCLPAVCTKGDGRVHREVATTT*SSLADH Trigger: GTGGTCAGCCAATGAGCTTCAGGTGGTAGTGGCAAC...CTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCGACATTCTGGCAGTATaGCACCATCTCATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAASGGCCRDLLRICRPFDILAV*HHLIQL Trigger: AAGCTGTATGAGATGGTGTCATACTGCCAGAATGTC...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACGAACATCTTGCTTTTTaGAATTTTCTCTGGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHEHLAF*NFLWSY Trigger: GTAACTCCAGAGAAAATTGCAAAAAGCAAGATGTTC...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR GCA 90 bp | ATAATCAACTCTGCCGTCAGGCAGCTCATGTCCTGTTGTCTTCCAGCTGTTTGTGCCAAATGCGACTGTTaGCACTACCACCTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IINSAVRQLMSCCLPAVCAKCDC*HYHLKL Trigger: GAGCTTCAGGTGGTAGTGGCAACAGTCGCATTTGGC...ACAAACAGCTGGAAGACAACAGGACATGAGCTGCCTGACGGCAGAGTTGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGAAATTCCCATGCCAAATaGGACTGTTGCCACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGNSHAK*DCCHYH Trigger: GTGGTAGTGGCAACAGTCGCATTTGGCATGGGAATT...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGATACCTTTCCGAACCATaGAAAATCTTCTTTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRYLSEP*KIFFIP Trigger: TGGAATAAAGAAGATTTTCCATGGTTCGGAAAGGTA...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
||
| CDS-3UTR TCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATCATTGAATGATGGATaGCAAACCTCACGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGSLNDG*QTSRLA Trigger: AGCCAGACGTGAGGTTTGTCATCCATCATTCAATGA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCGATTTGCTCATTGAATaGTGGATGACAAACCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: AAASGGCCRDLLRICRPFDLLIE*WMTNLT Trigger: CGTGAGGTTTGTCATCCATCATTCAATGAGCAAATC...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGCACTCTCAACTTGGCTaGTCCCTTTCCCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCCLPAVCTKGDGRVHREHSQLG*SLSHPS Trigger: GCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTG...CTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | ACCGATGAGTCCAGCTGTCTGTGGCAGCTTTTCTACTTTAAATTGAAGCCACTGCCTGAAGCTGAGCTTTaGTCTTCCCCCTTCGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TDESSCLWQLFYFKLKPLPEAEL*SSPFES Trigger: GGATTCGAAGGGGGAAGAGCAAAGCTCAGCTTCAGG...CAGTGGCTTCAATTTAAAGTAGAAAAGCTGCCACAGACAGCTGGACTCATCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| CDS-3UTR CCA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATACACTTGCTGACATTCTaGCAGTATGACACCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESFSKHGCLLFPHCSLLIHLLTF*QYDTIS Trigger: TGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTG...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| 3UTR CAA 72 bp | GGCTGGGTACACACTGACTGTTGGGTGTTTCTGAGGTaGAGATTCTGGGACATTTGGATCTGTTCAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWVHTDCWVFLR*RFWDIWICSVG Trigger: TCCTACTGAACAGATCCAAATGTCCCAGAATCTCAACCTCAGAAACACCCAACAGTCAGTGTGTACCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATTCACCATTTCAGCGTaGACCCATTTTACATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGFTISA*THFTCS Trigger: GGAACATGTAAAATGGGTGCACGCTGAAATGGTGAA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | GTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGTCTGCAGAACATGGTTGGTTaGTGTTGCAGTCAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVFQLFVQKEMVEFTGSLQNMVG*CCSQPH Trigger: ATGGGGCTGACTGCAACAGCAACCAACCATGTTCTG...CAGACTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATATTGGCATGGTAAGTaGCTGCATGAATTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TECMGTQVENADTRLDVGYWHGK*LHEFPT Trigger: AGTTGGGAATTCATGCAGGCACTTACCATGCCAATA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCGAGAGAAACAGTATATaGTTCCTGATTGTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAASGGCCRDLLRICRPFERNSI*FLIVLC Trigger: ACAAAGGACAATCAGGAATCATATACTGTTTCTCTC...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTTTAACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCGGCATGGTAAGTGCCTaGATGAATTCCCAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSPEGFKSPSANTAAGMVSA*MNSQLL Trigger: CAGAAGTTGGGAATTCATGCAGGCACTTACCATGCC...GGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGTTAAAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | CAAATCTTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTTCTTTGAGATATTGCTaGAGGAGGGCGTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: QIFGRIWTIITQPSQSVFSLRYC*RRAWAT Trigger: CGTCGCCCACGCCCTCCTGCAGCAATATCTCAAAGA...AAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAAGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR CCA 90 bp | GACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCAGCCACTCTCAACTTaGCTGCTCCCTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DHHNPTQSVSISQIKTKQQPLST*LLPFPS Trigger: GGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTG...CTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGTTTCTGAGGTTGAGATTCTGGGACATTTGGATCTGTTCAGTAGGAGTCGACATTCTGGCAGTATaGCACCATCTCATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WVFLRLRFWDIWICSVGVDILAV*HHLIQL Trigger: AAGCTGTATGAGATGGTGTCATACTGCCAGAATGTC...GACTCCTACTGAACAGATCCAAATGTCCCAGAATCTCAACCTCAGAAACACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | GACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCTTGTCTGGTGTGTCTaGGCTTTGCTCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DHHNPTQSVSISQIKTKQLVWCV*ALLFPL Trigger: AAGGGGGAAGAGCAAAGCTCAGACACACCAGACAAG...CTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | TGCACTTTAACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCACTGGCGCTTCAAGATaGCAAGAGCCTTATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSPEGFKSPSANTAATGASR*QEPYNQ Trigger: CTGATTATAAGGCTCTTGGCATCTTGAAGCGCCAGT...GGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGTTAAAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGAATCTCATACAGCTTCTaGTGCCCCACGTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FGRIWTIITQPSQSVFHRISYSF*CPTFSM Trigger: CATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGAT...TCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | GACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCACTCTCAACTTGGCTaGTCCCTTTCCCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHHNPTQSVSISQIKTKQHSQLG*SLSHPS Trigger: GCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTG...CTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTTTAACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCACATCCTTCAGAACATaGTTGGTTGCTGTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSPEGFKSPSANTAATSFRT*LVAVAV Trigger: GACTGCAACAGCAACCAACCATGTTCTGAAGGATGT...GGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGTTAAAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCTGGATGTCAATGGCATaGAGCTCACTGGCTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QICVFILKLPGLSGWEGSWMSMA*SSLATD Trigger: ATCCGTAGCCAGTGAGCTTCATGCCATTGACATCCA...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGGGCTTTCTCCAGTCTTaGCATGAACATCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCLPAVCTKGDGRVHREGFLQS*HEHLAF Trigger: AAAAGCAAGATGTTCATGTCAAGACTGGAGAAAGCC...CTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | GACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCCTTATAATCAGGCCTaGAGTCATGACCCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DHHNPTQSVSISQIKTKQPYNQA*SHDPTD Trigger: GTCAGTGGGGTCATGACTTCAGGCCTGATTATAAGG...CTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| 3UTR CAA 72 bp | AAGTACCATGCCTTCTTCATTAAAAAGCCTGTGTGTTaGGGACTAAGTGCAGATCCCCAGACTTCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KYHAFFIKKPVC*GLSADPQTSCT Trigger: TGTACAGGAAGTCTGGGGATCTGCACTTAGTCCCAAACACACAGGCTTTTTAATGAAGAAGGCATGGTACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGTTGCCACTACCACCTaGAGCTCATTGGCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNVATTT*SSLADH Trigger: GTGGTCAGCCAATGAGCTTCAGGTGGTAGTGGCAAC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | ATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCTTTCATTCATACAGCTTCTGCTaGCCCACGTTCTCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: ITQPSQSVFHRSKQNSFHSYSFC*PTFSMT Trigger: GGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGA...ATGAAAGCTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTTTAACATCTCCTGAAGGTTTTAAGAGTCCTTCAGCAAACACGGCTGCCCACACTTCATCAAAATaGTGTGCTATTAACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: CTLTSPEGFKSPSANTAAHTSSK*CAINTR Trigger: CCGTGTGTTAATAGCACAGCATTTTGATGAAGTGTG...GGCAGCCGTGTTTGCTGAAGGACTCTTAAAACCTTCAGGAGATGTTAAAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | ACCGATGAGTCCAGCTGTCTGTGGCAGCTTTTCTACTTTAAATTGAAGCCACTGTTTGTTACAGGCATCTaGGTTCCACACTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDESSCLWQLFYFKLKPLFVTGI*VPHFIK Trigger: TTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAA...CAGTGGCTTCAATTTAAAGTAGAAAAGCTGCCACAGACAGCTGGACTCATCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTATCTTTGAGATATTGCTaGAGGAGGGCGTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: LFCFQFSHSVHIETRCEVSLRYC*RRAWAT Trigger: CGTCGCCCACGCCCTCCTGCAGCAATATCTCAAAGA...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGCTTGGTCTTATCTTCTaGTTCCATATTGGCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCCLPAVCTKGDGRVHRELGLIF*FHIGMV Trigger: TACCATGCCAATATGGAACCAGAAGATAAGACCAAG...CTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAACAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGACACTTGCTGACATTCTaGCAGTATGACACCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGRIWTIITQPSQSVFHRHLLTF*QYDTIS Trigger: TGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTG...TCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCAGCCACTCTCAACTTaGCTGCTCCCTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNQPLST*LLPFPS Trigger: GGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| 3UTR CAA 72 bp | TGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCTaGCTGACACACTTGGTGCTGAGGACTGTTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: CCRDLLRICRPF*LTHLVLRTVLS Trigger: AGATAAAACAGTCCTCAGCACCAAGTGTGTCAGCAAGAATGGCCTGCATATTCTAAGTAAATCACGACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAATCATTGAATGATGGATaGCAAACCTCACGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PWLFQRTTISQLQLIKVKSLNDG*QTSRLA Trigger: AGCCAGACGTGAGGTTTGTCATCCATCATTCAATGA...TTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAGCCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAAGGAAAGAGCTGTAGTCTTCTTTaGGATATTGCTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFQRTTISQLQLIKVKGKSCSLL*DIAAGG Trigger: CCCTCCTGCAGCAATATCTCAAAGAAGACTACAGCT...CTTTCCTTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCTTCTGGGAGTTACCTaGGCTTTGCTCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNLLGVT*ALLFPL Trigger: AAGGGGGAAGAGCAAAGCTCAGGTAACTCCCAGAAG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCCACTCTCAACTTGGCTaGTCCCTTTCCCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSHSQLG*SLSHPS Trigger: GCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTG...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCGCGGCCTCAGGAGGCTaGTGTCGTGATTTACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSAASGG*CRDLLR Trigger: TCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGC...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
||
| 3UTR CAA 72 bp | ATGACTCATTTGCAGATGAACACTCCTCCTCTAGAGTaGACGATAAACCTTGACTCATACAAATACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MTHLQMNTPPLE*TINLDSYKYTS Trigger: GCTGGTGTATTTGTATGAGTCAAGGTTTATCGTCAACTCTAGAGGAGGAGTGTTCATCTGCAAATGAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111803.9 ENSMUST00000123912.2 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATTTTCCCTGTCAGGACTaGCTTTCTCTGAAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNFPCQD*LSLKEL Trigger: GAGCTCCTTCAGAGAAAGTCAGTCCTGACAGGGAAA...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCCTTATAATCAGGCCTaGAGTCATGACCCCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNPYNQA*SHDPTD Trigger: GTCAGTGGGGTCATGACTTCAGGCCTGATTATAAGG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCAAAGTCTTCAGCACTTaGGGGCTTTTGCCGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSKVFST*GLLPNL Trigger: GAGGTTCGGCAAAAGCCCTCAAGTGCTGAAGACTTT...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | ATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCTTTCATAATTCCCATGCCAAATaGGACTGTTGCCACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITQPSQSVFHRSKQNSFHNSHAK*DCCHYH Trigger: GTGGTAGTGGCAACAGTCGCATTTGGCATGGGAATT...ATGAAAGCTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAAGGAAAGGCTTATCAATTCCCATaGCAAATGCGACTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFQRTTISQLQLIKVKGKAYQFP*QMRLLP Trigger: TGGCAACAGTCGCATTTGGCATGGGAATTGATAAGC...CTTTCCTTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCGAGTTACCTGAGCTTTaGTCTTCCCCCTTCGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSELPEL*SSPFES Trigger: GGATTCGAAGGGGGAAGAGCAAAGCTCAGGTAACTC...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCTTTCATAAGTACCATGCCGACAAACCTCACGTCTaGCTTATCAATTCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSVFHRSKQNSFHKYHADKPHV*LINSHA Trigger: GGCATGGGAATTGATAAGCCAGACGTGAGGTTTGTC...GGCATGGTACTTATGAAAGCTGTTTTGTTTTGATCTGTGAAATACTGACTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | ATAAAATTTGGCCTAACTACAGGCCCTCATTTCACTAATTCCATGTTATGCAACGCTGACCACTGTGTATaGACCTTGGTCTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKFGLTTGPHFTNSMLCNADHCV*TLVLSS Trigger: AGAAGATAAGACCAAGGTTCATACACAGTGGTCAGC...GTTGCATAACATGGAATTAGTGAAATGAGGGCCTGTAGTTAGGCCAAATTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAAGGAAAGGATTTGCTCATTGAATaGTGGATGACAAACCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LFQRTTISQLQLIKVKGKDLLIE*WMTNLT Trigger: CGTGAGGTTTGTCATCCATCATTCAATGAGCAAATC...CTTTCCTTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATAGCTGTAGTCTTCTTTaGGATATTGCTGCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNSCSLL*DIAAGG Trigger: CCCTCCTGCAGCAATATCTCAAAGAAGACTACAGCT...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATAACGCTGCTCTGTGCTaGCTTCTTCACTTGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNNAALC*LLHLHS Trigger: ACTATGCAAGTGAAGAAGTCAGCACAGAGCAGCGTT...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCTTAGAGCCAGATGGCTaGAGCCTGCTTTTAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSLEPDG*SLLLDF Trigger: GAAGTCTAAAAGCAGGCTTCAGCCATCTGGCTCTAA...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCGAGGACTGTTTTATCTaGGCTTTGCTCTTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSEDCFI*ALLFPL Trigger: AAGGGGGAAGAGCAAAGCTCAGATAAAACAGTCCTC...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGGCATGGTAAGTGCCTaGATGAATTCCCAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNGMVSA*MNSQLL Trigger: CAGAAGTTGGGAATTCATGCAGGCACTTACCATGCC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGACAAACCTCACGTCTaGCTTATCAATTCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNDKPHV*LINSHA Trigger: GGCATGGGAATTGATAAGCCAGACGTGAGGTTTGTC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCTTTAAAACCATCAGCTaGTCTTCCATAAGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QICVFILKLPGLSGWEGSFKTIS*SSIREM Trigger: CATCTCTCTTATGGAAGATCAGCTGATGGTTTTAAA...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCGAGAGAAACAGTATATaGTTCCTGATTGTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QICVFILKLPGLSGWEGSERNSI*FLIVLC Trigger: ACAAAGGACAATCAGGAATCATATACTGTTTCTCTC...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGCTGACCACTGTGTATaGACCTTGGTCTTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNADHCV*TLVLSS Trigger: AGAAGATAAGACCAAGGTTCATACACAGTGGTCAGC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTAGACATTCTGGCAGTATaGCACCATCTCATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFCFQFSHSVHIETRCEVDILAV*HHLIQL Trigger: AAGCTGTATGAGATGGTGTCATACTGCCAGAATGTC...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTAATCTGTAATGGGATCTaGTGCTCTTGTCTGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFCFQFSHSVHIETRCEVICNGI*CSCLVC Trigger: ACACACCAGACAAGAGCATCAGATCCCATTACAGAT...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCACTGGCGCTTCAAGATaGCAAGAGCCTTATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSTGASR*QEPYNQ Trigger: CTGATTATAAGGCTCTTGGCATCTTGAAGCGCCAGT...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATGCTTATCAATTCCCATaGCAAATGCGACTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNAYQFP*QMRLLP Trigger: TGGCAACAGTCGCATTTGGCATGGGAATTGATAAGC...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATTTCAGGCCTTCAGCCTaGTTCAGAATCTTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNFRPSA*FRIFIR Trigger: CCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAA...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCGTTTTATCTGAGCTTTaGTCTTCCCCCTTCGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSVLSEL*SSPFES Trigger: GGATTCGAAGGGGGAAGAGCAAAGCTCAGATAAAAC...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATACATCCTTCAGAACATaGTTGGTTGCTGTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNTSFRT*LVAVAV Trigger: GACTGCAACAGCAACCAACCATGTTCTGAAGGATGT...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCCACTTGCTGACATTCTaGCAGTATGACACCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSHLLTF*QYDTIS Trigger: TGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTG...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCTGCTTTTAGACTTCTaGGAGTTACCTGAGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNLLLDF*ELPELC Trigger: GCAAAGCTCAGGTAACTCCCAGAAGTCTAAAAGCAG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCGGCTTTCTCCAGTCTTaGCATGAACATCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSGFLQS*HEHLAF Trigger: AAAAGCAAGATGTTCATGTCAAGACTGGAGAAAGCC...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | CAAATCTTTGGTAGGATTTGGACCATCATAACCCAACCCAGTCAGTCAGTATTTGAACATCTTGCTTTTTaGAATTTTCTCTGGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QIFGRIWTIITQPSQSVFEHLAF*NFLWSY Trigger: GTAACTCCAGAGAAAATTGCAAAAAGCAAGATGTTC...AAATACTGACTGACTGGGTTGGGTTATGATGGTCCAAATCCTACCAAAGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | AGTCAGTCAGTATTTCACAGATCAAAACAAAACAGCTTTCATAAGTACCATGCCTTTGTTACAGGCATCTaGGTTCCACACTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQSVFHRSKQNSFHKYHAFVTGI*VPHFIK Trigger: TTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAA...GGCATGGTACTTATGAAAGCTGTTTTGTTTTGATCTGTGAAATACTGACTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR CCA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCTACCTTTCCGAACCATaGAAAATCTTCTTTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QICVFILKLPGLSGWEGSYLSEP*KIFFIP Trigger: TGGAATAAAGAAGATTTTCCATGGTTCGGAAAGGTA...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR GCA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTACACACTTCATCAAAATaGTGTGCTATTAACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCFQFSHSVHIETRCEVHTSSK*CAINTR Trigger: CCGTGTGTTAATAGCACAGCATTTTGATGAAGTGTG...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCACACTTCATCAAAATaGTGTGCTATTAACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNHTSSK*CAINTR Trigger: CCGTGTGTTAATAGCACAGCATTTTGATGAAGTGTG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS-3UTR GCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATTTTGTTACAGGCATCTaGGTTCCACACTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNFVTGI*VPHFIK Trigger: TTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAA...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS-3UTR CCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCCTTGGTCTTATCTTCTaGTTCCATATTGGCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSLGLIF*FHIGMV Trigger: TACCATGCCAATATGGAACCAGAAGATAAGACCAAG...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS-3UTR CCA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTAACTGTGTATGAACCTTaGTCTTATCTTCTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFCFQFSHSVHIETRCEVTVYEP*SYLLVP Trigger: TGGAACCAGAAGATAAGACCAAGGTTCATACACAGT...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
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| CDS-3UTR CCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCACTGTGTATGAACCTTaGTCTTATCTTCTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSTVYEP*SYLLVP Trigger: TGGAACCAGAAGATAAGACCAAGGTTCATACACAGT...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS-3UTR TCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATTTTAAAACCATCAGCTaGTCTTCCATAAGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNFKTIS*SSIREM Trigger: CATCTCTCTTATGGAAGATCAGCTGATGGTTTTAAA...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCGATTTACTTAGAATATaGAGGCCATTCTTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KKILQMNSFNDSFADEHSDLLRI*RPFLLT Trigger: TGTCAGCAAGAATGGCCTGCATATTCTAAGTAAATC...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
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| CDS-3UTR CCA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATTACCTTTCCGAACCATaGAAAATCTTCTTTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNYLSEP*KIFFIP Trigger: TGGAATAAAGAAGATTTTCCATGGTTCGGAAAGGTA...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS CCA 90 bp | CTTCCCGGGGAAGGGCCGGGGCAACAACGCCAGCCACTCTCAACTTaGCTGCTCCCTTTCCCATCCAAGCATCAATCAGCTTCAGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGEGPGQQRQPLST*LLPFPSKHQSASAG Trigger: CCCCGCTGAAGCTGATTGATGCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGGCGTTGTTGCCCCGGCCCTTCCCCGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS-3UTR CAA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACCAGCCACTCTCAACTaGGCTGCTCCCTTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRPATLN*AAPFPI Trigger: GATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGG...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACATGGTTGGTTGCTGTaGCAGTCAGCCCCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRHGWLL*QSAPSV Trigger: CACTGATGGGGCTGACTGCAACAGCAACCAACCATG...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | TCACTTCCAGGCCCCTTCACTCGCCATTCGCTTGGCCTTCCCGTGCTGGGTGGGAACACACGGCGACACTaGCTGACATTCTGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPGPFTRHSLGLPVLGGNTRRH*LTFWQY Trigger: ATACTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTT...CCCACCCAGCACGGGAAGGCCAAGCGAATGGCGAGTGAAGGGGCCTGGAAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| CDS GCA 90 bp | CCTGAAGTCATGACCCCACTGACTGCAGCAATGCACTTCATCCACTaGCGCTCCCGTCAGCCTCCCGGCTTCATAGGCTTTCTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PEVMTPLTAAMHFIH*RSRQPPGFIGFLQS Trigger: AGACTGGAGAAAGCCTATGAAGCCGGGAGGCTGACGGGAGCGGCAGTGGATGAAGTGCATTGCTGCAGTCAGTGGGGTCATGACTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS-3UTR CAA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTCAGAACATGGTTGGTaGCTGTTGCAGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHSEHGW*LLQSAP Trigger: TGGGGCTGACTGCAACAGCAACCAACCATGTTCTGA...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGATGCCAAATGCGACTGTaGCCACTACCACCTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRCQMRL*PLPPEA Trigger: AGCTTCAGGTGGTAGTGGCAACAGTCGCATTTGGCA...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | GGACATTTGGATCTGTTCAGTAGGAGTCTGGCCAGGGGTGTGCACTCCGCAGCTCCAGCCACTCTCAACTaGGCTGCTCCCTTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GHLDLFSRSLARGVHSAAPATLN*AAPFPI Trigger: GATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGG...AGCTGCGGAGTGCACACCCCTGGCCAGACTCCTACTGAACAGATCCAAATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141504.8 |
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| CDS-3UTR CAA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACAACACACGGCGACACTaGCTGACATTCTGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHNTRRH*LTFWQY Trigger: ATACTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTT...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | TGCTCCCCCTGTTGCCCTCAGCCTGAGAGGCTTCCCGGGAAGCTCTGCCTGTCCACGTCTTTACAGCAGTaGTCACACATTTTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: CSPCCPQPERLPGKLCLSTSLQQ*SHILLQ Trigger: CTGTAACAAAATGTGTGACAACTGCTGTAAAGACGT...GGACAGGCAGAGCTTCCCGGGAAGCCTCTCAGGCTGAGGGCAACAGGGGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| CDS-3UTR CAA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACTCCTCCAAGTACTGTTaGATTTTCCCTGTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHSSKYC*IFPVRT Trigger: AGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGA...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | AGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACCAGTTGTCACACATTTaGTTACAGGCATCTGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RALWRGDRKIRTSRPSPDQLSHI*LQASAF Trigger: GAACGCAGATGCCTGTAACAAAATGTGTGACAACTG...GTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS TCA 90 bp | CCAAGTCGCTGCTCGCCTCAGCCGAAGAGTCCTCCAAGTACTGTTTaGTTTTCCCTGTCAGGACTGACTTTCTCTGAAGGAGCTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSRCSPQPKSPPSTV*FSLSGLTFSEGALA Trigger: GGCAAGAGCTCCTTCAGAGAAAGTCAGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGACTCTTCGGCTGAGGCGAGCAGCGACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
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| CDS CCA 90 bp | GAACATGGTTGGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTaGGAAACTGGCGCTTCAAGATGCCAAGAGCCTTATAATCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EHGWLLLQSAPSVRR*ETGASRCQEPYNQA Trigger: GGCCTGATTATAAGGCTCTTGGCATCTTGAAGCGCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS-3UTR CAA 90 bp | GAGGGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGAAAAAGATTTGGCCGGTaGAAAGACGCTGTAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGTLEGRQEDQDLEAIPRKRFGR*KDAVKV Trigger: GACTTTTACAGCGTCTTTCAACCGGCCAAATCTTTT...TCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCTGCCAAATGCGACTGTaGCCACTACCACCTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAASGGCCRDLLRICRPFCQMRL*PLPPEA Trigger: AGCTTCAGGTGGTAGTGGCAACAGTCGCATTTGGCA...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS GCA 90 bp | GCTGATCCTGAATATGTCCCCAAAGCCGTAATACAGAATACAGTCTaGTCTCGAGTCATCGCGACCGGCACGCCCGCTCTCTTGATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ADPEYVPKAVIQNTV*SRVIATGTPALLIV Trigger: TACTATCAAGAGAGCGGGCGTGCCGGTCGCGATGACTCGAGAGCAGACTGTATTCTGTATTACGGCTTTGGGGACATATTCAGGATCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS-3UTR CAA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATCAGAACATGGTTGGTaGCTGTTGCAGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TECMGTQVENADTRLDVGSEHGW*LLQSAP Trigger: TGGGGCTGACTGCAACAGCAACCAACCATGTTCTGA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
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| CDS-3UTR CAA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACATTCCTGATTGTCCTTaGTACCGTCCATTAATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHIPDCP*YRPLIS Trigger: GCTAATTAATGGACGGTACAAAGGACAATCAGGAAT...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS-3UTR CAA 90 bp | GGCACTTTGGAGGGGAGACAGGAAGATCAGGACCTCGAGGCCATCCCCAGACACACGTCTTTACAGCAGTaGTCACACATTTTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GTLEGRQEDQDLEAIPRHTSLQQ*SHILLQ Trigger: CTGTAACAAAATGTGTGACAACTGCTGTAAAGACGT...GTGTCTGGGGATGGCCTCGAGGTCCTGATCTTCCTGTCTCCCCTCCAAAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS TCA 90 bp | CTGTCAGGACTGACTTTCTCTGAAGGAGCTCTTGCCGCCTCTCTGTaGGTTCCTGAATCTGGATGTCAATGGCATGAAGCTCACTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSGLTFSEGALAASL*VPESGCQWHEAHWL Trigger: TAGCCAGTGAGCTTCATGCCATTGACATCCAGATTCAGGAACTCACAGAGAGGCGGCAAGAGCTCCTTCAGAGAAAGTCAGTCCTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
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| CDS TCA 90 bp | AGCCGAAGAGTCCTCCAAGTACTGTTTGATTTTCCCTGTCAGGACTaGCTTTCTCTGAAGGAGCTCTTGCCGCCTCTCTGTGAGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRVLQVLFDFPCQD*LSLKELLPPLCEFL Trigger: CAGGAACTCACAGAGAGGCGGCAAGAGCTCCTTCAGAGAAAGTCAGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGACTCTTCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
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| CDS TCA 90 bp | ATCCTTCAGAACATGGTTGGTTGCTGTTGCAGTCAGCCCCATCAGTaGGGCGTTGGGAAACTGGCGCTTCAAGATGCCAAGAGCCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: ILQNMVGCCCSQPHQ*GVGKLALQDAKSLI Trigger: TATAAGGCTCTTGGCATCTTGAAGCGCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS GCA 90 bp | CACTTGCTGACATTCTGGCAGTATGACACCATCTCATACAGCTTCTaGTGCCCCACGTTCTCCATGACCACCATCGAGCTGATCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HLLTFWQYDTISYSF*CPTFSMTTIELILN Trigger: ATTCAGGATCAGCTCGATGGTGGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 90 bp | TCAATCAGCTTCAGCGGGGTCAGCTTTTCATTCAGGCCTTCAGCCTaGTTCAGAATCTTTATCAGGTCCCGGCAGTGCTGTGTCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: SISFSGVSFSFRPSA*FRIFIRSRQCCVTF Trigger: GAATGTGACACAGCACTGCCGGGACCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAATGAAAAGCTGACCCCGCTGAAGCTGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS-3UTR CAA 90 bp | CTGTTTCCTCATTGCTCCCTTCTGATAGAGCACACGGCCAGGGGGACCACACTGAAAAGATTTGGCCGGTaGAAAGACGCTGTAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFPHCSLLIEHTARGTTLKRFGR*KDAVKV Trigger: GACTTTTACAGCGTCTTTCAACCGGCCAAATCTTTT...CAGTGTGGTCCCCCTGGCCGTGTGCTCTATCAGAAGGGAGCAATGAGGAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
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| CDS-3UTR CAA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATAAACACACGGCGACACTaGCTGACATTCTGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ESFSKHGCLLFPHCSLLINTRRH*LTFWQY Trigger: ATACTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTT...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| CDS GCA 90 bp | TTGCTGACATTCTGGCAGTATGACACCATCTCATACAGCTTCTGCTaGCCCACGTTCTCCATGACCACCATCGAGCTGATCCTGAATATG | + |
|
Preference number: 5 (lower is better) Translates to: LLTFWQYDTISYSFC*PTFSMTTIELILNM Trigger: CATATTCAGGATCAGCTCGATGGTGGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGATGGTGTCATACTGCCAGAATGTCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS CCA 90 bp | ACTTTCCCACACACAGGATTTTCTGTACATCCTTCAGAACATGGTTaGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTGGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TFPHTGFSVHPSEHG*LLLQSAPSVRRWET Trigger: AGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTGTGGGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CCA 90 bp | AAACACTTTCCCACACACAGGATTTTCTGTACATCCTTCAGAACATaGTTGGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KHFPTHRIFCTSFRT*LVAVAVSPISEALG Trigger: TCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTGTGGGAAAGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | GAGTCCTTCAGCAAACACGGCTGCCTGCTGTTTCCTCATTGCTCCCTTCTGATATCCTCCAAGTACTGTTaGATTTTCCCTGTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ESFSKHGCLLFPHCSLLISSKYC*IFPVRT Trigger: AGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGA...TATCAGAAGGGAGCAATGAGGAAACAGCAGGCAGCCGTGTTTGCTGAAGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR CAA 90 bp | ACGGAGTGCATGGGCACTCAAGTAGAGAATGCAGACACCAGACTGGATGTTGGATCCTCCAAGTACTGTTaGATTTTCCCTGTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TECMGTQVENADTRLDVGSSKYC*IFPVRT Trigger: AGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGA...TCCAACATCCAGTCTGGTGTCTGCATTCTCTACTTGAGTGCCCATGCACTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | GTTGTCTTCCAGCTGTTTGTACAAAAGGAGATGGTAGAGTTCACAGGGAGTCTGTGCCAAATGCGACTGTaGCCACTACCACCTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVFQLFVQKEMVEFTGSLCQMRL*PLPPEA Trigger: AGCTTCAGGTGGTAGTGGCAACAGTCGCATTTGGCA...CAGACTCCCTGTGAACTCTACCATCTCCTTTTGTACAAACAGCTGGAAGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS TCA 90 bp | TGCCGCTCCCGTCAGCCTCCCGGCTTCATAGGCTTTCTCCAGTCTTaGCATGAACATCTTGCTTTTTGCAATTTTCTCTGGAGTTACATA | + |
|
Preference number: 5 (lower is better) Translates to: CRSRQPPGFIGFLQS*HEHLAFCNFLWSYI Trigger: TATGTAACTCCAGAGAAAATTGCAAAAAGCAAGATGTTCATGTCAAGACTGGAGAAAGCCTATGAAGCCGGGAGGCTGACGGGAGCGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CCA 90 bp | CCACTACCACCTGAAGCTCATTGGCTGACCACTGTGTATGAACCTTaGTCTTATCTTCTGGTTCCATATTGGCATGGTAAGTGCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLPPEAHWLTTVYEP*SYLLVPYWHGKCLH Trigger: ATGCAGGCACTTACCATGCCAATATGGAACCAGAAGATAAGACCAAGGTTCATACACAGTGGTCAGCCAATGAGCTTCAGGTGGTAGTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCATTCCTGATTGTCCTTaGTACCGTCCATTAATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAASGGCCRDLLRICRPFIPDCP*YRPLIS Trigger: GCTAATTAATGGACGGTACAAAGGACAATCAGGAAT...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCGGCCTCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCACGTCTTTACAGCAGTaGTCACACATTTTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: AAASGGCCRDLLRICRPFTSLQQ*SHILLQ Trigger: CTGTAACAAAATGTGTGACAACTGCTGTAAAGACGT...GAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGAGGCCGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCCCAGCCACTCTCAACTaGGCTGCTCCCTTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QICVFILKLPGLSGWEGSPATLN*AAPFPI Trigger: GATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGG...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS GCA 90 bp | TTCAGGCCTTCAGCCTGCTTCAGAATCTTTATCAGGTCCCGGCAGTaGTGTGTCACATTCTTTTTCTCAAACGAAACGTCTTTACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FRPSACFRIFIRSRQ*CVTFFFSNETSLQQ Trigger: CTGCTGTAAAGACGTTTCGTTTGAGAAAAAGAATGTGACACAGCACTGCCGGGACCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
||
| CDS-3UTR CAA 90 bp | CAAATATGTGTATTTATTTTGAAACTTCCAGGTTTAAGTGGGTGGGAGGGGAGCCATGGTTGGTTGCTGTaGCAGTCAGCCCCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QICVFILKLPGLSGWEGSHGWLL*QSAPSV Trigger: CACTGATGGGGCTGACTGCAACAGCAACCAACCATG...GCTCCCCTCCCACCCACTTAAACCTGGAAGTTTCAAAATAAATACACATATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR CAA 90 bp | ATAATCAACTCTGCCGTCAGGCAGCTCATGTCCTGTTGTCTTCCAGCTGTTTGTCAGTTGTCACACATTTaGTTACAGGCATCTGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IINSAVRQLMSCCLPAVCQLSHI*LQASAF Trigger: GAACGCAGATGCCTGTAACAAAATGTGTGACAACTG...ACAAACAGCTGGAAGACAACAGGACATGAGCTGCCTGACGGCAGAGTTGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
||
| CDS TCA 90 bp | GGCACGCCCGCTCTCTTGATAGTAATTCTCCATGGATTTGCTCATTaGATGATGGATGACAAACCTCACGTCTGGCTTATCAATTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GTPALLIVILHGFAH*MMDDKPHVWLINSH Trigger: ATGGGAATTGATAAGCCAGACGTGAGGTTTGTCATCCATCATTCAATGAGCAAATCCATGGAGAATTACTATCAAGAGAGCGGGCGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS GCA 90 bp | TCACACATTTTGTTACAGGCATCTGCGTTCCACACTTCATCAAAATaGTGTGCTATTAACACACGGCGACACTTGCTGACATTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHILLQASAFHTSSK*CAINTRRHLLTFWQ Trigger: CTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTTAATAGCACAGCATTTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAAATGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
||
| CDS TCA 90 bp | CTCCCGTCAGCCTCCCGGCTTCATAGGCTTTCTCCAGTCTTGACATaGACATCTTGCTTTTTGCAATTTTCTCTGGAGTTACATAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSASRLHRLSPVLT*TSCFLQFSLELHKS Trigger: TGATTTATGTAACTCCAGAGAAAATTGCAAAAAGCAAGATGTTCATGTCAAGACTGGAGAAAGCCTATGAAGCCGGGAGGCTGACGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTCCAAAGGACCACCATAAGTCAGTTACAGCTGATAAAGGTAAAAGGAAAGTCAGAACATGGTTGGTaGCTGTTGCAGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFQRTTISQLQLIKVKGKSEHGW*LLQSAP Trigger: TGGGGCTGACTGCAACAGCAACCAACCATGTTCTGA...CTTTCCTTTTACCTTTATCAGCTGTAACTGACTTATGGTGGTCCTTTGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS-3UTR CAA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCCAGCCACTCTCAACTaGGCTGCTCCCTTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNPATLN*AAPFPI Trigger: GATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS TCA 90 bp | TCTCTTGATAGTAATTCTCCATGGATTTGCTCATTGAATGATGGATaGCAAACCTCACGTCTGGCTTATCAATTCCCATGCCAAATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLDSNSPWICSLNDG*QTSRLAYQFPCQMR Trigger: TCGCATTTGGCATGGGAATTGATAAGCCAGACGTGAGGTTTGTCATCCATCATTCAATGAGCAAATCCATGGAGAATTACTATCAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCAACACACGGCGACACTaGCTGACATTCTGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KKILQMNSFNDSFADEHSNTRRH*LTFWQY Trigger: ATACTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTT...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCATATGCAGGCCATTCTaGCTGACACACTTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKILQMNSFNDSFADEHSICRPF*LTHLVL Trigger: CAGCACCAAGTGTGTCAGCAAGAATGGCCTGCATAT...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
||
| CDS-3UTR CAA 90 bp | GACCATCATAACCCAACCCAGTCAGTCAGTATTTCACAGATCAAAACAAAACAGACGTCTTTACAGCAGTaGTCACACATTTTGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: DHHNPTQSVSISQIKTKQTSLQQ*SHILLQ Trigger: CTGTAACAAAATGTGTGACAACTGCTGTAAAGACGT...CTGTTTTGTTTTGATCTGTGAAATACTGACTGACTGGGTTGGGTTATGATGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| CDS-3UTR CAA 90 bp | GACTGTAGGCTATGTGGCAGTATTATCTACAGAGTATATTCATGCCATTTAAATCAGTTGTCACACATTTaGTTACAGGCATCTGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DCRLCGSIIYRVYSCHLNQLSHI*LQASAF Trigger: GAACGCAGATGCCTGTAACAAAATGTGTGACAACTG...ATTTAAATGGCATGAATATACTCTGTAGATAATACTGCCACATAGCCTACAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS-3UTR CAA 90 bp | TTATTTTGCTTCCAGTTTTCTCACAGTGTTCACATTGAAACCAGATGTGAAGTACAGTTGTCACACATTTaGTTACAGGCATCTGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFCFQFSHSVHIETRCEVQLSHI*LQASAF Trigger: GAACGCAGATGCCTGTAACAAAATGTGTGACAACTG...TACTTCACATCTGGTTTCAATGTGAACACTGTGAGAAAACTGGAAGCAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100832.10 ENSMUST00000141504.8 |
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| CDS-3UTR CAA 90 bp | AAGAAAATTCTTCAGATGAACTCGTTTAATGACTCATTTGCAGATGAACACTCCAAAAGATTTGGCCGGTaGAAAGACGCTGTAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KKILQMNSFNDSFADEHSKRFGR*KDAVKV Trigger: GACTTTTACAGCGTCTTTCAACCGGCCAAATCTTTT...GGAGTGTTCATCTGCAAATGAGTCATTAAACGAGTTCATCTGAAGAATTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS TCA 90 bp | TTCAACATAGTAGCTGAAATTCCCAACTGTTTTAAAACCATCAGCTaGTCTTCCATAAGAGAGATGAGTGGGCAAATCACAAGTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FNIVAEIPNCFKTIS*SSIREMSGQITSVK Trigger: TTTTACACTTGTGATTTGCCCACTCATCTCTCTTATGGAAGATCAGCTGATGGTTTTAAAACAGTTGGGAATTTCAGCTACTATGTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000129694.8 ENSMUST00000203772.3 |
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| CDS-3UTR CAA 90 bp | AAACAAAACAGCTTTCATAAGTACCATGCCTTCTTCATTAAAAAGCCTGTGTGTATTCCTGATTGTCCTTaGTACCGTCCATTAATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQNSFHKYHAFFIKKPVCIPDCP*YRPLIS Trigger: GCTAATTAATGGACGGTACAAAGGACAATCAGGAAT...ACACACAGGCTTTTTAATGAAGAAGGCATGGTACTTATGAAAGCTGTTTTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
||
| CDS CAA 90 bp | TCTTCCCGGGGAAGGGCCGGGGCAACAACGCCAGCCACTCTCAACTaGGCTGCTCCCTTTCCCATCCAAGCATCAATCAGCTTCAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRGRAGATTPATLN*AAPFPIQASISFSG Trigger: CCCGCTGAAGCTGATTGATGCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGGCGTTGTTGCCCCGGCCCTTCCCCGGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | ATGACCCCACTGACTGCAGCAATGCACTTCATCCACTaGCGCTCCCGTCAGCCTCCCGGCTTCATAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MTPLTAAMHFIH*RSRQPPGFIGF Trigger: AAAGCCTATGAAGCCGGGAGGCTGACGGGAGCGGCAGTGGATGAAGTGCATTGCTGCAGTCAGTGGGGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS GCA 72 bp | GGCCGGGGCAACAACGCCAGCCACTCTCAACTTGGCTaGTCCCTTTCCCATCCAAGCATCAATCAGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGNNASHSQLG*SLSHPSINQLQ Trigger: CTGAAGCTGATTGATGCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGGCGTTGTTGCCCCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS CCA 72 bp | GAAGGGCCGGGGCAACAACGCCAGCCACTCTCAACTTaGCTGCTCCCTTTCCCATCCAAGCATCAATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGPGQQRQPLST*LLPFPSKHQSA Trigger: AGCTGATTGATGCTTGGATGGGAAAGGGAGCAGCCAAGTTGAGAGTGGCTGGCGTTGTTGCCCCGGCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS TCA 72 bp | CTAGACATTGGCGGCTGTGTCGGCTGCATGAGAGCCTaGGCTTTGCTCTTCCCCCTTCGAATCCACTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDIGGCVGCMRA*ALLFPLRIHLF Trigger: GAACAAGTGGATTCGAAGGGGGAAGAGCAAAGCTCAGGCTCTCATGCAGCCGACACAGCCGCCAATGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032370.13 |
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| CDS GCA 72 bp | GAATATGTCCCCAAAGCCGTAATACAGAATACAGTCTaGTCTCGAGTCATCGCGACCGGCACGCCCGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EYVPKAVIQNTV*SRVIATGTPAL Trigger: GAGAGCGGGCGTGCCGGTCGCGATGACTCGAGAGCAGACTGTATTCTGTATTACGGCTTTGGGGACATATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 72 bp | GGCGTAAGCCGTGAAGCTGTAGTCTTCTTTGAGATATaGCTGCAGGAGGGCGTGGGCGACGATTCTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVSREAVVFFEI*LQEGVGDDSLQ Trigger: CTGGAGAGAATCGTCGCCCACGCCCTCCTGCAGCAATATCTCAAAGAAGACTACAGCTTCACGGCTTACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS TCA 72 bp | AACATGGTTGGTTGCTGTTGCAGTCAGCCCCATCAGTaGGGCGTTGGGAAACTGGCGCTTCAAGATGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NMVGCCCSQPHQ*GVGKLALQDAK Trigger: CTTGGCATCTTGAAGCGCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CCA 72 bp | TGGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTaGGAAACTGGCGCTTCAAGATGCCAAGAGCCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WLLLQSAPSVRR*ETGASRCQEPY Trigger: ATAAGGCTCTTGGCATCTTGAAGCGCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 72 bp | TTGGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTaGGGAAACTGGCGCTTCAAGATGCCAAGAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LVAVAVSPISEA*GNWRFKMPRAL Trigger: TAAGGCTCTTGGCATCTTGAAGCGCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS TCA 72 bp | AGCTTCAGACAGTGCACCCCTAACGCTGCTCTGTGCTaGCTTCTTCACTTGCATAGTGACAGCATGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFRQCTPNAALC*LLHLHSDSMGF Trigger: GAAGCCCATGCTGTCACTATGCAAGTGAAGAAGTCAGCACAGAGCAGCGTTAGGGGTGCACTGTCTGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | TTCTGGCAGTATGACACCATCTCATACAGCTTCTGCTaGCCCACGTTCTCCATGACCACCATCGAGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: FWQYDTISYSFC*PTFSMTTIELI Trigger: GATCAGCTCGATGGTGGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGATGGTGTCATACTGCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | ACATTCTGGCAGTATGACACCATCTCATACAGCTTCTaGTGCCCCACGTTCTCCATGACCACCATCGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TFWQYDTISYSF*CPTFSMTTIEL Trigger: CAGCTCGATGGTGGTCATGGAGAACGTGGGGCAGCAGAAGCTGTATGAGATGGTGTCATACTGCCAGAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | TTCAGCGGGGTCAGCTTTTCATTCAGGCCTTCAGCCTaGTTCAGAATCTTTATCAGGTCCCGGCAGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSGVSFSFRPSA*FRIFIRSRQCC Trigger: ACAGCACTGCCGGGACCTGATAAAGATTCTGAAGCAGGCTGAAGGCCTGAATGAAAAGCTGACCCCGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS CAA 90 bp | CACACAGGATTTTCTGTACATCCTTCAGAACATGGTTGGTTGCTGTaGCAGTCAGCCCCATCAGTGAGGCGTTGGGAAACTGGCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HTGFSVHPSEHGWLL*QSAPSVRRWETGAS Trigger: TGAAGCGCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 90 bp | TTCCCACACACAGGATTTTCTGTACATCCTTCAGAACATGGTTGGTaGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTGGGAAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPHTGFSVHPSEHGW*LLQSAPSVRRWETG Trigger: GCCAGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS CAA 72 bp | GACTTCTTCACTTGCATAGTGACAGCATGGGCTTCGTaGCTGAGAAGACAAGCTCTGGGTCCCACCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DFFTCIVTAWAS*LRRQALGPTFR Trigger: TCTGAAGGTGGGACCCAGAGCTTGTCTTCTCAGCAACGAAGCCCATGCTGTCACTATGCAAGTGAAGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS CAA 90 bp | CACTTTCCCACACACAGGATTTTCTGTACATCCTTCAGAACATGGTaGGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTGGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HFPTHRIFCTSFRTW*VAVAVSPISEALGN Trigger: GTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTGTGGGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS TCA 72 bp | CTGACTTTCTCTGAAGGAGCTCTTGCCGCCTCTCTGTaGGTTCCTGAATCTGGATGTCAATGGCATGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTFSEGALAASL*VPESGCQWHEA Trigger: AGCTTCATGCCATTGACATCCAGATTCAGGAACTCACAGAGAGGCGGCAAGAGCTCCTTCAGAGAAAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
||
| CDS TCA 72 bp | GTCCTCCAAGTACTGTTTGATTTTCCCTGTCAGGACTaGCTTTCTCTGAAGGAGCTCTTGCCGCCTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VLQVLFDFPCQD*LSLKELLPPLC Trigger: ACAGAGAGGCGGCAAGAGCTCCTTCAGAGAAAGTCAGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
||
| CDS TCA 72 bp | TGCTCGCCTCAGCCGAAGAGTCCTCCAAGTACTGTTTaGTTTTCCCTGTCAGGACTGACTTTCTCTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSPQPKSPPSTV*FSLSGLTFSEG Trigger: TCCTTCAGAGAAAGTCAGTCCTGACAGGGAAAATCAAACAGTACTTGGAGGACTCTTCGGCTGAGGCGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
||
| CDS TCA 72 bp | TGCGACTGTTGCCACTACCACCTGAAGCTCATTGGCTaGCCACTGTGTATGAACCTTGGTCTTATCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CDCCHYHLKLIG*PLCMNLGLIFW Trigger: CCAGAAGATAAGACCAAGGTTCATACACAGTGGTCAGCCAATGAGCTTCAGGTGGTAGTGGCAACAGTCGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS TCA 72 bp | TGGCTGAAGCCTGCTTTTAGACTTCTGGGAGTTACCTaGGCTTTGCTCTTCCCCCTTCGAATCCACTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WLKPAFRLLGVT*ALLFPLRIHLF Trigger: GAACAAGTGGATTCGAAGGGGGAAGAGCAAAGCTCAGGTAACTCCCAGAAGTCTAAAAGCAGGCTTCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111803.9 |
||
| CDS CCA 72 bp | CACACAGGATTTTCTGTACATCCTTCAGAACATGGTTaGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: HTGFSVHPSEHG*LLLQSAPSVRR Trigger: ACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
||
| CDS CAA 72 bp | ACAGGATTTTCTGTACATCCTTCAGAACATGGTTGGTaGCTGTTGCAGTCAGCCCCATCAGTGAGGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: TGFSVHPSEHGW*LLQSAPSVRRW Trigger: CCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 72 bp | ACACACAGGATTTTCTGTACATCCTTCAGAACATGGTaGGTTGCTGTTGCAGTCAGCCCCATCAGTGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: THRIFCTSFRTW*VAVAVSPISEA Trigger: CGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAATCCTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS TCA 72 bp | TCTGTAATGGGATCTGATGCTCTTGTCTGGTGTGTCTaGGCTTTGCTCTTCCCCCTTCGAATCCACTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SVMGSDALVWCV*ALLFPLRIHLF Trigger: GAACAAGTGGATTCGAAGGGGGAAGAGCAAAGCTCAGACACACCAGACAAGAGCATCAGATCCCATTACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100832.10 |
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| CDS TCA 72 bp | CTTGCTGACACACTTGGTGCTGAGGACTGTTTTATCTaGGCTTTGCTCTTCCCCCTTCGAATCCACTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LADTLGAEDCFI*ALLFPLRIHLF Trigger: GAACAAGTGGATTCGAAGGGGGAAGAGCAAAGCTCAGATAAAACAGTCCTCAGCACCAAGTGTGTCAGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
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| CDS CCA 72 bp | GTTCCTGAATCTGGATGTCAATGGCATGAAGCTCACTaGCTACGGATTCCAGTTCCTCTGTCAAAGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VPESGCQWHEAH*LRIPVPLSKLR Trigger: TCTCAGCTTTGACAGAGGAACTGGAATCCGTAGCCAGTGAGCTTCATGCCATTGACATCCAGATTCAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000128082.2 ENSMUST00000129694.8 ENSMUST00000203772.3 |
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| CDS CAA 72 bp | TTTTCTGTACATCCTTCAGAACATGGTTGGTTGCTGTaGCAGTCAGCCCCATCAGTGAGGCGTTGGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: FSVHPSEHGWLL*QSAPSVRRWET Trigger: AGTTTCCCAACGCCTCACTGATGGGGCTGACTGCAACAGCAACCAACCATGTTCTGAAGGATGTACAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 90 bp | TCAGGAGGCTGCTGTCGTGATTTACTTAGAATATGCAGGCCATTCTaGCTGACACACTTGGTGCTGAGGACTGTTTTATCTGAGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SGGCCRDLLRICRPF*LTHLVLRTVLSELC Trigger: GCAAAGCTCAGATAAAACAGTCCTCAGCACCAAGTGTGTCAGCAAGAATGGCCTGCATATTCTAAGTAAATCACGACAGCAGCCTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123912.2 |
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| CDS TCA 72 bp | CGTCAGCCTCCCGGCTTCATAGGCTTTCTCCAGTCTTaGCATGAACATCTTGCTTTTTGCAATTTTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RQPPGFIGFLQS*HEHLAFCNFLW Trigger: CCAGAGAAAATTGCAAAAAGCAAGATGTTCATGTCAAGACTGGAGAAAGCCTATGAAGCCGGGAGGCTGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS TCA 72 bp | CAAAATGCTGTGCTATTAACACACGGCGACACTTGCTaGCATTCTGGCAGTATGACACCATCTCATACAGCT | + |
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Preference number: 6 (lower is better) Translates to: QNAVLLTHGDTC*HSGSMTPSHTA Trigger: AGCTGTATGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTTAATAGCACAGCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | TTGTTACAGGCATCTGCGTTCCACACTTCATCAAAATaGTGTGCTATTAACACACGGCGACACTTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: LLQASAFHTSSK*CAINTRRHLLT Trigger: TGTCAGCAAGTGTCGCCGTGTGTTAATAGCACAGCATTTTGATGAAGTGTGGAACGCAGATGCCTGTAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | TCAGCCTGCTTCAGAATCTTTATCAGGTCCCGGCAGTaGTGTGTCACATTCTTTTTCTCAAACGAAACGTCT | + |
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Preference number: 6 (lower is better) Translates to: SACFRIFIRSRQ*CVTFFFSNETS Trigger: AGACGTTTCGTTTGAGAAAAAGAATGTGACACAGCACTGCCGGGACCTGATAAAGATTCTGAAGCAGGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS CCA 72 bp | CCTGAAGCTCATTGGCTGACCACTGTGTATGAACCTTaGTCTTATCTTCTGGTTCCATATTGGCATGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: PEAHWLTTVYEP*SYLLVPYWHGK Trigger: CTTACCATGCCAATATGGAACCAGAAGATAAGACCAAGGTTCATACACAGTGGTCAGCCAATGAGCTTCAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 72 bp | TCATCAAAATGCTGTGCTATTAACACACGGCGACACTaGCTGACATTCTGGCAGTATGACACCATCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SSKCCAINTRRH*LTFWQYDTISY Trigger: GTATGAGATGGTGTCATACTGCCAGAATGTCAGCAAGTGTCGCCGTGTGTTAATAGCACAGCATTTTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS TCA 72 bp | GCTCTCTTGATAGTAATTCTCCATGGATTTGCTCATTaGATGATGGATGACAAACCTCACGTCTGGCTTATC | + |
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Preference number: 6 (lower is better) Translates to: ALLIVILHGFAH*MMDDKPHVWLI Trigger: GATAAGCCAGACGTGAGGTTTGTCATCCATCATTCAATGAGCAAATCCATGGAGAATTACTATCAAGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS GCA 72 bp | AGCTTTAACTGGGAGTTTTTATTCACCATTTCAGCGTaGACCCATTTTACATGTTCCTTAGAGCTGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SFNWEFLFTISA*THFTCSLELEA Trigger: TGCTTCCAGCTCTAAGGAACATGTAAAATGGGTGCACGCTGAAATGGTGAATAAAAACTCCCAGTTAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 90 bp | TTCTTTTTCTCAAACGAAACGTCTTTACAGCAGTTGTCACACATTTaGTTACAGGCATCTGCGTTCCACACTTCATCAAAATGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FFFSNETSLQQLSHI*LQASAFHTSSKCCA Trigger: AGCACAGCATTTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAAATGTGTGACAACTGCTGTAAAGACGTTTCGTTTGAGAAAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS CAA 72 bp | ATTCCTGATTGTCCTTTGTACCGTCCATTAATTAGCTaGACAATGTCCTCAGTAAAGTCTTCAGCACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: IPDCPLYRPLIS*TMSSVKSSALE Trigger: CTCAAGTGCTGAAGACTTTACTGAGGACATTGTCAAGCTAATTAATGGACGGTACAAAGGACAATCAGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 |
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| CDS CAA 72 bp | TCAAACGAAACGTCTTTACAGCAGTTGTCACACATTTaGTTACAGGCATCTGCGTTCCACACTTCATCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SNETSLQQLSHI*LQASAFHTSSK Trigger: TTTTGATGAAGTGTGGAACGCAGATGCCTGTAACAAAATGTGTGACAACTGCTGTAAAGACGTTTCGTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000141504.8 |
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| CDS GCA 72 bp | TCCTTTCTAGCCATGGTGACATTGATGGTTTCCAGCTaGAGAGGTCTGAATTTTTGCAGTTTAAAAACATTT | + |
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Preference number: 6 (lower is better) Translates to: SFLAMVTLMVSS*RGLNFCSLKTF Trigger: AAATGTTTTTAAACTGCAAAAATTCAGACCTCTGCAGCTGGAAACCATCAATGTCACCATGGCTAGAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000032370.13 ENSMUST00000100832.10 ENSMUST00000111803.9 ENSMUST00000129694.8 ENSMUST00000203772.3 |
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