RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RECK (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028476

Ensembl transcript IDs: ENSMUST00000030198.7

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATaGCATAGATGCTTGGATGTTGTGGGGCCGCCCCCACTCACAGGC +
Preference number: 1 (lower is better)
Translates to: GEYWRVYLANTTRQA*HRCLDVVGPPPLTG
Trigger: GCCTGTGAGTGGGGGCGGCCCCACAACATCCAAGCATCTATGTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR TCA 90 bp AGACAGAAACAGGCAACTGTGACAGAGGTACATCGACATCGGCACTaGGATCCTCTGAAAGCATTAAGTGCCCACTTTCAACAACATTTT +
Preference number: 1 (lower is better)
Translates to: RQKQATVTEVHRHRH*DPLKALSAHFQQHF
Trigger: AAAATGTTGTTGAAAGTGGGCACTTAATGCTTTCAGAGGATCTCAGTGCCGATGTCGATGTACCTCTGTCACAGTTGCCTGTTTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR CCA 90 bp AACTGGCCAGGGATCCACCAGGAAGAGGCATCATCTTCATTATATTaGGAGAGTCTAATTTACCATTTTATAAACCAAGGCAAACCCCCT +
Preference number: 1 (lower is better)
Translates to: NWPGIHQEEASSSLY*ESLIYHFINQGKPP
Trigger: AGGGGGTTTGCCTTGGTTTATAAAATGGTAAATTAGACTCTCCCAATATAATGAAGATGATGCCTCTTCCTGGTGGATCCCTGGCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR TCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACGTAGCGGCTTTTCACTaGGCCCTCAGCCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDVAAFH*ALSLQT
Trigger: TGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTAC...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR CCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACATGTCTTTCACAAGGTaGACGGCTGGGTGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDMSFTR*TAGWRK
Trigger: CTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACAT...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACTGTGGTGCTAAGAGGTaGCACATGCCTTTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDCGAKR*HMPLLG
Trigger: ACCAAGCAAAGGCATGTGGCACCTCTTAGCACCACA...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACAGCAGAGTAGAGTCCTaGCTTACATTTCTATGGAGT +
Preference number: 2 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDSRVES*LTFLWS
Trigger: ACTCCATAGAAATGTAAGGCAGGACTCTACTCTGCT...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR GCA 90 bp CTTATCCACACTGTGCACATTACAAAAAGCAGATGTGTCTTCATGAAAGTATGGGGTGGAGGAAGGCTTTaGAGTTCCTCCCAGTTGTGG +
Preference number: 2 (lower is better)
Translates to: LIHTVHITKSRCVFMKVWGGGRL*SSSQLW
Trigger: CCACAACTGGGAGGAACTGCAAAGCCTTCCTCCACC...CCATACTTTCATGAAGACACATCTGCTTTTTGTAATGTGCACAGTGTGGATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR TCA 90 bp CTTATCCACACTGTGCACATTACAAAAAGCAGATGTGTCTTCATGAAAGTATGGAAGTGGTTTAAAGTCTaGCCTTTAAACCTGTGGACT +
Preference number: 2 (lower is better)
Translates to: LIHTVHITKSRCVFMKVWKWFKV*PLNLWT
Trigger: AGTCCACAGGTTTAAAGGTCAGACTTTAAACCACTT...CCATACTTTCATGAAGACACATCTGCTTTTTGTAATGTGCACAGTGTGGATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR TCA 72 bp ACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTaGGGAGACCAGGGCACCCACCCAAGGACAAAGGGG +
Preference number: 3 (lower is better)
Translates to: TSTWRPQHSQEL*GDQGTHPRTKG
Trigger: CCCCTTTGTCCTTGGGTGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR TCA 72 bp CGGCCCGCCCTGTCATGGCAGGTAGCGGCTTTTCACTaGGCCCTCAGCCTCCAGACACAGAAACAAGCACAT +
Preference number: 3 (lower is better)
Translates to: RPALSWQVAAFH*ALSLQTQKQAH
Trigger: ATGTGCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCATGACAGGGCGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR TCA 72 bp GGATGTTGTGGGGCCGCCCCCACTCACAGGCACAAATaGCAACTGCTGAGAGGCCCAAGTGTGAGACAGGCA +
Preference number: 3 (lower is better)
Translates to: GCCGAAPTHRHK*QLLRGPSVRQA
Trigger: TGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGGGCGGCCCCACAACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR TCA 72 bp TGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATaGCATAGATGCTTGGATGTTGTGGGGCCGCCCCCA +
Preference number: 3 (lower is better)
Translates to: WRVYLANTTRQA*HRCLDVVGPPP
Trigger: TGGGGGCGGCCCCACAACATCCAAGCATCTATGTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR CAA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGGGTGGAGGAAGGCTTaGCAGTTCCTCCCAGTTGTG +
Preference number: 3 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKGWRKA*QFLPVV
Trigger: CACAACTGGGAGGAACTGCAAAGCCTTCCTCCACCC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR CAA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGTTGGTCGTCTTGCTTTaGCTAAGCAGAGTAGAGTCC +
Preference number: 3 (lower is better)
Translates to: HSQAQMTTAERPKCETGTLVVLL*LSRVES
Trigger: GGACTCTACTCTGCTTAGCAAAAGCAAGACGACCAA...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR-3UTR CAA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGTGTCACTTGGTCGTCTaGCTTTTGCTAAGCAGAGTA +
Preference number: 3 (lower is better)
Translates to: HSQAQMTTAERPKCETGTCHLVV*LLLSRV
Trigger: TACTCTGCTTAGCAAAAGCAAGACGACCAAGTGACA...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR TCA 72 bp CAGGCAACTGTGACAGAGGTACATCGACATCGGCACTaGGATCCTCTGAAAGCATTAAGTGCCCACTTTCAA +
Preference number: 3 (lower is better)
Translates to: QATVTEVHRHRH*DPLKALSAHFQ
Trigger: TTGAAAGTGGGCACTTAATGCTTTCAGAGGATCTCAGTGCCGATGTCGATGTACCTCTGTCACAGTTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCGAAGTAGCAGCGCGCTaGGCGGGGAGGCCCGGACGC +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGEVAAR*AGRPGR
Trigger: GCGTCCGGGCCTCCCCGCGCAGCGCGCTGCTACTTC...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCAGCAACCAACTTCCCCTaGAGAGGACGGCACCTGGAT +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPATNFP*RGRHLD
Trigger: ATCCAGGTGCCGTCCTCTGCAGGGGAAGTTGGTTGC...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCAACAGTGACTCCAGGGTaGACCGACTGTGAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPTVTPG*TDCELS
Trigger: CGAAAGCTCACAGTCGGTTCACCCTGGAGTCACTGT...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCACTAAAGCACTTGGCCTaGGGTACGTGTCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPLKHLA*GTCPEG
Trigger: TCCCTCTGGACACGTACCTCAGGCCAAGTGCTTTAG...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCACACACTGGGACAAACTaGTCTGCGCAGTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPHTGTN*SAQLQG
Trigger: GCCCTGTAACTGCGCAGATCAGTTTGTCCCAGTGTG...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCATCCACTGCTTTGATCTaGGATGGCCCAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPSTALI*DGPGEE
Trigger: CTCTTCTCCTGGGCCATCTCAGATCAAAGCAGTGGA...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACGGGCCTGGTCACAGGTaGGCTGTCTGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDGPGHR*AVWAHT
Trigger: AGTGTGTGCCCAGACAGCTCACCTGTGACCAGGCCC...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCCAGGCTCCTTGGCTCTaGAGAAAGGCTGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSQAPWL*RKAGKG
Trigger: GCCCTTGCCAGCCTTTCTGCAGAGCCAAGGAGCCTG...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGCTAGTCCAGAGCAAGTaGACGGTGAGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTLVQSK*TVRPRL
Trigger: CAGCCTGGGCCTCACCGTGCACTTGCTCTGGACTAG...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCATTTGTACAGCCCAACTaGCAAGGCTCCCGGACATCA +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPFVQPN*QGSRTS
Trigger: TGATGTCCGGGAGCCTTGCCAGTTGGGCTGTACAAA...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCCTGGCTGGCAGGTCTTaGTGTCTAGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSLAGRS*CLGQGC
Trigger: GCATCCCTGTCCTAGACATCAAGACCTGCCAGCCAG...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCATTGCTGTGCTCCATGTaGTCTGTGTCACACACAGGA +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPLLCSM*SVSHTG
Trigger: TCCTGTGTGTGACACAGATCACATGGAGCACAGCAA...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGAGATGCCTGCTTGCATaGCTGTCGGCACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTRCLLA*LSALQA
Trigger: GGCTTGGAGTGCCGACAGGCATGCAAGCAGGCATCT...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCGATGGCCTGCGTAACTaGAGCACACCGAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGDGLRN*STPSPF
Trigger: AAATGGGCTCGGTGTGCTGCAGTTACGCAGGCCATC...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCTCGTCGTCTGAACTGTaGTCACTGAGGCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSSSSEL*SLRHRR
Trigger: CCGCCTGTGCCTCAGTGAGCACAGTTCAGACGACGA...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp AGAAACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGGGCCTTCCACATCTCTaGCTGGCAGGTCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: RNKHMAASALTGTLRRPGGLPHL*LAGLDV
Trigger: GACATCAAGACCTGCCAGCCAGAGATGTGGAAGGCC...CCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGACACAGACAGGCTCCTTaGCTCTGCAGAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGHRQAP*LCRKAG
Trigger: GCCAGCCTTTCTGCAGAGCCAAGGAGCCTGTCTGTG...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCACAGCAAGCCCCTGGTaGGATGATGGGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSTASPW*DDGFAA
Trigger: GGCTGCAAACCCATCATCCCACCAGGGGCTTGCTGT...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGCCCCCTGGTCAGACTaGGCCGTGCAGCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKAPWSD*AVQLLN
Trigger: GTTCAGGAGCTGCACGGCTCAGTCTGACCAGGGGGC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGAGAGGGAAGGACACTTaGCAGCAGCACACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTRGKDT*QQHTQP
Trigger: TGGCTGAGTGTGCTGCTGTCAAGTGTCCTTCCCTCT...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCAGGCACTGGGGTAAGTaGGTCCATTCTGTGCACACA +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGRHWGK*VHSVHT
Trigger: TGTGTGCACAGAATGGACGCACTTACCCCAGTGCCT...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGAGCAACAGTGCAATTTaGCCCCGTCGAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTSNSAI*PRRGQL
Trigger: CAACTGGCCTCGACGGGGCCAAATTGCACTGTTGCT...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCGCTTCATGTCACTCATaGCCCCCTGGTCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSASCHS*PPGQTE
Trigger: CTCAGTCTGACCAGGGGGCCATGAGTGACATGAAGC...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCAACAGAGCTCGTTGGCTaGGCAGGGGTTTGGGTTACA +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFATELVG*AGVWVT
Trigger: TGTAACCCAAACCCCTGCCCAGCCAACGAGCTCTGT...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGATGGACAGCAAGCCCCTaGTGGGATGATGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGWTASP*WDDGFA
Trigger: TGCAAACCCATCATCCCACCAGGGGCTTGCTGTCCA...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGCTGGAGACCTGCACTTaGGAAATGATGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTLETCT*EMMRAE
Trigger: CTCGGCCCTCATCATTTCCCAAGTGCAGGTCTCCAG...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCAGTTCGAAAAATGGCTTaGCAGAATTCTCGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPVRKMA*QNSRQL
Trigger: CAACTGCCGAGAATTCTGTCAAGCCATTTTTCGAAC...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATGCCAAAGAGGATCTTaGGGCAAGGGCTGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFACQRGS*GKGWVL
Trigger: TAAGACCCAGCCCTTGCCTCAAGATCCTCTTTGGCA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGCGGCGGTCGTCGTCTaGACTGTGCTCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKAAVVV*TVLTEA
Trigger: TGCCTCAGTGAGCACAGTTCAGACGACGACCGCCGC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCAGCTTTAGAGCAACAGTaGAATTTGGCCCCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFAALEQQ*NLAPSR
Trigger: CCTCGACGGGGCCAAATTGCACTGTTGCTCTAAAGC...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp AGAAACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGAGTGCGTCCATTCTGTaGACACACTGGGACAAACTG +
Preference number: 4 (lower is better)
Translates to: RNKHMAASALTGTLRRPGSASIL*THWDKL
Trigger: CAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACT...CCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACCCAAACACGTCACACTaGGGCACAGACACGTGCATG +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDPNTSH*GTDTCM
Trigger: CATGCACGTGTCTGTGCCGCAGTGTGACGTGTTTGG...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCAGAATTCTCGGCAGTTaGTGTGATGGCCTGCGTAAC +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGRILGS*CDGLRN
Trigger: GTTACGCAGGCCATCACACCAACTGCCGAGAATTCT...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp AGAAACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGGCGTTTTGGCAAGCATaGTCTTCAGCTCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: RNKHMAASALTGTLRRPGAFWQA*SSALSQ
Trigger: CTGTGACAGAGCTGAAGACCATGCTTGCCAAAACGC...CCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCTTCCACATCTCTGGCTaGCAGGTCTTGATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGFHISG*QVLMSR
Trigger: CCTAGACATCAAGACCTGCCAGCCAGAGATGTGGAA...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGATGACGGGAGACTGCTaGAGACCTGCACTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTMTGDC*RPALGK
Trigger: TTTCCCAAGTGCAGGTCTCCAGCAGTCTCCCGTCAT...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCAATTTTCCACTGCTTTaGTCTGAGATGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGNFPLL*SEMAQE
Trigger: CTCCTGGGCCATCTCAGATCAAAGCAGTGGAAAATT...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGACCCAATTTGCAGCCTTaGACACAGGAGTATGGAAGG +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGPNLQP*TQEYGR
Trigger: CCTTCCATACTCCTGTGTTCAAGGCTGCAAATTGGG...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACTGGGACAAACTGATCTaGGCAGTTACAGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDWDKLI*AVTGQT
Trigger: GGTCTGCCCTGTAACTGCGCAGATCAGTTTGTCCCA...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAACCACACAGCGAGCGATaGAGGCACTGGGGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKPHSER*RHWGKC
Trigger: GCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGG...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAACAGAGTGCAGAGGTTaGTGTGCTCCATGTGATCTG +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGTECRG*CAPCDL
Trigger: CAGATCACATGGAGCACAGCAACCTCTGCACTCTGT...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCCTCTTTGGTACAGAGTaGAGAGGTTGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSLFGTE*RGCCAP
Trigger: TGGAGCACAGCAACCTCTGCACTCTGTACCAAAGAG...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCTATGTCTCACCATTGTaGCCACAGACAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSYVSPL*PQTGSL
Trigger: CAAGGAGCCTGTCTGTGGGCACAATGGTGAGACATA...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGACTCGATTTTCTCTaGCTCCTTATTGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGGLDFL*LLIAGL
Trigger: GAGGCCTGCAATAAGGAGGCAGAGAAAATCGAGTCC...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCCTCTTGCAGGCGTTTTaGCAAGCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSLLQAF*QAWSSA
Trigger: AGCTGAAGACCATGCTTGCCAAAACGCCTGCAAGAG...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAACACGGCCACACGATCTaGGTAGGCAGCACACACACT +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKHGHTI*VGSTHT
Trigger: AGTGTGTGTGCTGCCTACTCAGATCGTGTGGCCGTG...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCATCATTTTTCGAAGATaGCTGCTTGCATGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGIIFRR*LLACLS
Trigger: CGACAGGCATGCAAGCAGGCATCTTCGAAAAATGAT...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGATCTCTGCCTCCTTATTaGAGGCCTCAATCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGSLPPY*RPQSAK
Trigger: CTTTGCAGATTGAGGCCTGCAATAAGGAGGCAGAGA...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATGCTTTGATCTGAGATaGCCCAGGAGAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFACFDLR*PRRRVC
Trigger: ACAGACTCTTCTCCTGGGCCATCTCAGATCAAAGCA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCACCTGAACAGTTCTGTTaGCCTGTTGTTAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPPEQFC*PVVKVC
Trigger: ACAAACTTTAACAACAGGCCAACAGAACTGTTCAGG...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAACTTCACAGAGCTCGTTaGCTGGGCAGGGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKLHRAR*LGRGLG
Trigger: ACCCAAACCCCTGCCCAGCCAACGAGCTCTGTGAAG...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATTGAACACAGGAGTATaGAAGGCAGGGATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFALNTGV*KAGICR
Trigger: TCTGCAGATCCCTGCCTTCCATACTCCTGTGTTCAA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCAATTCTGTGCACACACTaGGACAAACTGATCTGCGCA +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFAILCTH*DKLICA
Trigger: TGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAAT...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCAGATTACAGGGATTCTTaGAGATACAAGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPDYRDS*RYKVQT
Trigger: AGTTTGGACCTTGTATCTCCAAGAATCCCTGTAATC...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATTTGGGTTACAGGGGTaGGTCACTTCTTCTATGATG +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFAFGLQG*VTSSMM
Trigger: CATCATAGAAGAAGTGACTCACCCCTGTAACCCAAA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp AGAAACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGTTTGAGGAGAAAATCTaGTCACATACATCACGGCAC +
Preference number: 4 (lower is better)
Translates to: RNKHMAASALTGTLRRPGFEEKI*SHTSRH
Trigger: GTGCCGTGATGTATGTGAGCAGATTTTCTCCTCAAA...CCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGTTGGTGTGATGGCCTaGGTAACTGCAGCACACCGA +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKVGVMA*VTAAHR
Trigger: TCGGTGTGCTGCAGTTACGCAGGCCATCACACCAAC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCTGCTATAAAGTTTGGTaGACAGTTCCCTACAGGTTG +
Preference number: 4 (lower is better)
Translates to: PHSQAQMTTAERPKCETGCYKVW*TVPYRL
Trigger: CAACCTGTAGGGAACTGTGCACCAAACTTTATAGCA...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACCGTCAGGCAGACTTGTaGTTTTGGCACACATCTTTG +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDRQADL*FWHTSL
Trigger: CAAAGATGTGTGCCAAAACCACAAGTCTGCCTGACG...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCAGGCACACACTCATATTaGCTACATCCAAATTTATCA +
Preference number: 4 (lower is better)
Translates to: KHMAASALTGTLRRPGHPGTHSY*LHPNLS
Trigger: TGATAAATTTGGATGTAGCCAATATGAGTGTGTGCC...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGTCTCCACATTTCTTaGGAATCTCTACACAATCTG +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGGLHIS*ESLHNL
Trigger: CAGATTGTGTAGAGATTCTCAAGAAATGTGGAGACC...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAATTTGCAGCCTATGGCTaGGAGGGAAGGACACTTGAC +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKFAAYG*EGRTLD
Trigger: GTCAAGTGTCCTTCCCTCTCAGCCATAGGCTGCAAA...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACATGCGGTCAAACTCTTaGCAACTCTGTGTATTTCCC +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDMRSNS*QLCVFP
Trigger: GGGAAATACACAGAGTTGGCAAGAGTTTGACCGCAT...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGCTCTCCAGGTCATCTaGAGGGGACAGAAACTCACA +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKALQVI*RGQKLT
Trigger: TGTGAGTTTCTGTCCCCTGCAGATGACCTGGAGAGC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGTCATGCTATAAAGTTTaGTGCACAGTTCCCTACAGG +
Preference number: 4 (lower is better)
Translates to: HSQAQMTTAERPKCETGTSCYKV*CTVPYR
Trigger: CCTGTAGGGAACTGTGCACCAAACTTTATAGCATGA...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACTTTGGCACACATCTTTaGCTTTTGGGGCAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDFGTHL*LLGQRL
Trigger: TAACCTCTGCCCCAAAAGCCAAAGATGTGTGCCAAA...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCAGCAGACTTGTGGTTTTaGCACACATCTTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFAADLWF*HTSLAF
Trigger: AAAAGCCAAAGATGTGTGCCAAAACCACAAGTCTGC...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACTCTTACAACCCTCAATaGGACCATCAACAATCTCCA +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDSYNPQ*DHQQSP
Trigger: TGGAGATTGTTGATGGTCTCATTGAGGGTTGTAAGA...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGCACAGACACGTGCATaGGGACCTTCTGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKAQTRA*GPSEES
Trigger: AGATTCTTCAGAAGGTCCGCATGCACGTGTCTGTGC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACCAATTTCCGACTCGATaGTCAAGTATCCAAACACGT +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDQFPTR*SSIQTR
Trigger: ACGTGTTTGGATACTTGAGCATCGAGTCGGAAATTG...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCAATCTCTACACAATCTaGTTTGCAGATAATACTGCC +
Preference number: 4 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSNLYTI*FADNTA
Trigger: GGCAGTATTATCTGCAAATCAGATTGTGTAGAGATT...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACACAATAATTTTCCACTaGTTTGATCTGAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDTIIFH*FDLRWP
Trigger: GGGCCATCTCAGATCAAAGCAGTGGAAAATTATTGT...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACACATTAGAATTCTCTTaGAGGCGTTTTGGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDTLEFS*RRFGKH
Trigger: ATGCTTGCCAAAACGCCTGCAAGAGAATTCTAATGT...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAATTCAGGGCAATAATCTaGGGCTCTCTGCAACAGATG +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKFRAII*GSLQQM
Trigger: CATCTGTTGCAGAGAGCCCCAGATTATTGCCCTGAA...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAAGTTGGGTTTCTCATTaGATAAGACTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: WSPASSPECLSQGGRLGGSWVSH*IRLGVI
Trigger: AATTACACCCAGTCTTATCCAATGAGAAACCCAACT...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACACAATACAAGACTTCTaGAGGTCGATACAGTGCATT +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDTIQDF*RSIQCI
Trigger: AATGCACTGTATCGACCTCCAGAAGTCTTGTATTGT...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAATCTCCACAACGGTTATaGGCTTCTTGCTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKSPQRL*ASCLSP
Trigger: AGGTGACAAGCAAGAAGCCCATAACCGTTGTGGAGA...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAACAGTTCCCTACAGGTTaGAGTGTTTGCTTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKQFPTG*SVCFRA
Trigger: TGCTCTAAAGCAAACACTTCAACCTGTAGGGAACTG...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACTCAGGGAATTTATTCTaGTCTCCACATTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDSGNLF*SPHFLR
Trigger: TCTCAAGAAATGTGGAGACCAGAATAAATTCCCTGA...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
3UTR CAA 72 bp AAAATACTGTGTGGTGCTAAGAGGTGCCACATGCCTTaGCTTGGTCACCAGCTAGCAGTCCTGAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: KILCGAKRCHMP*LGHQLAVLNVF
Trigger: AAAGACATTCAGGACTGCTAGCTGGTGACCAAGCAAAGGCATGTGGCACCTCTTAGCACCACACAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGATTATACTCACAGATaGGGTCAAACTCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKDYTHR*GQTLAN
Trigger: GTTGGCAAGAGTTTGACCGCATCTGTGAGTATAATC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR GCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAATGGAGGTCGATACAGTaGATTTCCATACAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKWRSIQ*ISIQFS
Trigger: GGAAAACTGTATGGAAATGCACTGTATCGACCTCCA...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAAGTCTGTTCGAAAAATaGCTTGACAGAATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKSLFEK*LDRILG
Trigger: GCCGAGAATTCTGTCAAGCCATTTTTCGAACAGACT...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CTTATCCACACTGTGCACATTACAAAAAGCAGATGTGTCTTCATGAAAGTATGGGAGCGATGCAGGCACTaGGGTAAGTGCGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LIHTVHITKSRCVFMKVWERCRH*GKCVHS
Trigger: AGAATGGACGCACTTACCCCAGTGCCTGCATCGCTC...CCATACTTTCATGAAGACACATCTGCTTTTTGTAATGTGCACAGTGTGGATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CCA 90 bp CTTATCCACACTGTGCACATTACAAAAAGCAGATGTGTCTTCATGAAAGTATGGCCAGACACGTCAGCATaGACACTTCCACCGGATTAT +
Preference number: 4 (lower is better)
Translates to: LIHTVHITKSRCVFMKVWPDTSA*TLPPDY
Trigger: ATAATCCGGTGGAAGTGTCCATGCTGACGTGTCTGG...CCATACTTTCATGAAGACACATCTGCTTTTTGTAATGTGCACAGTGTGGATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR TCA 90 bp CTTATCCACACTGTGCACATTACAAAAAGCAGATGTGTCTTCATGAAAGTATGGTGGTTATCTTTTGAATaGTTACAGCATACAGCACCC +
Preference number: 4 (lower is better)
Translates to: LIHTVHITKSRCVFMKVWWLSFE*LQHTAP
Trigger: GGGTGCTGTATGCTGTAATCATTCAAAAGATAACCA...CCATACTTTCATGAAGACACATCTGCTTTTTGTAATGTGCACAGTGTGGATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp CTGGAGACCTGCACTTGGGAAATGATGAGGGCCGAGAGTGGGACGTaGGACGCCAGCGTGGGGCTGTCGGAGTTGATGAGGGACTCGATT +
Preference number: 5 (lower is better)
Translates to: LETCTWEMMRAESGT*DASVGLSELMRDSI
Trigger: AATCGAGTCCCTCATCAACTCCGACAGCCCCACGCTGGCGTCCCACGTCCCACTCTCGGCCCTCATCATTTCCCAAGTGCAGGTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp GCCGACAGCCTGGCAGGGCCCGTAGTAATCCACGGCCACACGATCTaGGTAGGCAGCACACACACTGCTGTATGTCTCACCATTGTGCCC +
Preference number: 5 (lower is better)
Translates to: ADSLAGPVVIHGHTI*VGSTHTAVCLTIVP
Trigger: GGGCACAATGGTGAGACATACAGCAGTGTGTGTGCTGCCTACTCAGATCGTGTGGCCGTGGATTACTACGGGCCCTGCCAGGCTGTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCATTCGAAGATGCCTGCTaGCATGCCTGTCGGCACTCC +
Preference number: 5 (lower is better)
Translates to: KHMAASALTGTLRRPGHPFEDAC*HACRHS
Trigger: GGAGTGCCGACAGGCATGCAAGCAGGCATCTTCGAA...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp GGGGTAAGTGCGTCCATTCTGTGCACACACTGGGACAAACTGATCTaGGCAGTTACAGGGCAGACCTGTGAAGGTGCGGCGGTCGTCGTC +
Preference number: 5 (lower is better)
Translates to: GVSASILCTHWDKLI*AVTGQTCEGAAVVV
Trigger: GACGACGACCGCCGCACCTTCACAGGTCTGCCCTGTAACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp GGTCCTGGAGACCCACACAGCGAGCGATGCAGGCACTGGGGTAAGTaGGTCCATTCTGTGCACACACTGGGACAAACTGATCTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: GPGDPHSERCRHWGK*VHSVHTLGQTDLRS
Trigger: ACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGGGTCTCCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp GGCTTGATCTGCAGGGAGCAGGCCACGGCCTTCCACATCTCTGGCTaGCAGGTCTTGATGTCTAGGACAGGGATGCTGATGAAGGGCATC +
Preference number: 5 (lower is better)
Translates to: GLICREQATAFHISG*QVLMSRTGMLMKGI
Trigger: GATGCCCTTCATCAGCATCCCTGTCCTAGACATCAAGACCTGCCAGCCAGAGATGTGGAAGGCCGTGGCCTGCTCCCTGCAGATCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp AGAAACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGACTTCACAGAGCTCGTaGGCTGGGCAGGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: RNKHMAASALTGTLRRPGTSQSS*AGQGFG
Trigger: CCCAAACCCCTGCCCAGCCAACGAGCTCTGTGAAGT...CCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp CCCCTGCAGAGGACGGCACCTGGATCAGTGTCCCCTGGCGGACGATaGAGTCAGAAGCTTCTCCCAATTTGCAGCCTTGAACACAGGAGT +
Preference number: 5 (lower is better)
Translates to: PLQRTAPGSVSPGGR*SQKLLPICSLEHRS
Trigger: ACTCCTGTGTTCAAGGCTGCAAATTGGGAGAAGCTTCTGACTTCATCGTCCGCCAGGGGACACTGATCCAGGTGCCGTCCTCTGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp TGGACAGCAAGCCCCTGGTGGGATGATGGGTTTGCAGCCTATGGCTaGGAGGGAAGGACACTTGACAGCAGCACACTCAGCCACAGCACT +
Preference number: 5 (lower is better)
Translates to: WTASPWWDDGFAAYG*EGRTLDSSTLSHST
Trigger: AGTGCTGTGGCTGAGTGTGCTGCTGTCAAGTGTCCTTCCCTCTCAGCCATAGGCTGCAAACCCATCATCCCACCAGGGGCTTGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp TTGCAGATAATACTGCCTCGGGATTTGCTATGGCACGGCTTGATCTaGAGGGAGCAGGCCACGGCCTTCCACATCTCTGGCTGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LQIILPRDLLWHGLI*REQATAFHISGWQV
Trigger: GACCTGCCAGCCAGAGATGTGGAAGGCCGTGGCCTGCTCCCTGCAGATCAAGCCGTGCCATAGCAAATCCCGAGGCAGTATTATCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp TTACAGGGCAGACCTGTGAAGGTGCGGCGGTCGTCGTCTGAACTGTaGTCACTGAGGCACAGGCGGGTGGAACACACTAAATTACCCGCA +
Preference number: 5 (lower is better)
Translates to: LQGRPVKVRRSSSEL*SLRHRRVEHTKLPA
Trigger: TGCGGGTAATTTAGTGTGTTCCACCCGCCTGTGCCTCAGTGAGCACAGTTCAGACGACGACCGCCGCACCTTCACAGGTCTGCCCTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp CACACAGCGAGCGATGCAGGCACTGGGGTAAGTGCGTCCATTCTGTaGACACACTGGGACAAACTGATCTGCGCAGTTACAGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: HTASDAGTGVSASIL*THWDKLICAVTGQT
Trigger: GGTCTGCCCTGTAACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCCCACAGACAGGCTCCTaGGCTCTGCAGAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSPQTGS*ALQKGW
Trigger: CCAGCCTTTCTGCAGAGCCAAGGAGCCTGTCTGTGG...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp CCGTCGAGGCCAGTTGAGGGAGGAGGGTGCACAGTGACTCCAGGGTaGACCGACTGTGAGCTTTCGAGAAAACACTGCCAAAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: PSRPVEGGGCTVTPG*TDCELSRKHCQRGS
Trigger: AGATCCTCTTTGGCAGTGTTTTCTCGAAAGCTCACAGTCGGTTCACCCTGGAGTCACTGTGCACCCTCCTCCCTCAACTGGCCTCGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp GCCACTTTGTCCACAGGAACAGATCTTGTAGCAACCAACTTCCCCTaGAGAGGACGGCACCTGGATCAGTGTCCCCTGGCGGACGATGAA +
Preference number: 5 (lower is better)
Translates to: ATLSTGTDLVATNFP*RGRHLDQCPLADDE
Trigger: TTCATCGTCCGCCAGGGGACACTGATCCAGGTGCCGTCCTCTGCAGGGGAAGTTGGTTGCTACAAGATCTGTTCCTGTGGACAAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp GTCCAAACTCAAACTGATGGTCCTGGAGACCCACACAGCGAGCGATaGAGGCACTGGGGTAAGTGCGTCCATTCTGTGCACACACTGGGA +
Preference number: 5 (lower is better)
Translates to: VQTQTDGPGDPHSER*RHWGKCVHSVHTLG
Trigger: TCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGGGTCTCCAGGACCATCAGTTTGAGTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCGCTGGAGACCTGCACTaGGGAAATGATGAGGGCCGA +
Preference number: 5 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSAGDLH*GNDEGR
Trigger: TCGGCCCTCATCATTTCCCAAGTGCAGGTCTCCAGC...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp TCCCAATTTGCAGCCTTGAACACAGGAGTATGGAAGGCAGGGATCTaGAGACGGACACCCCTTCCGGTTCACTTCACAGAGCTCGTTGGC +
Preference number: 5 (lower is better)
Translates to: SQFAALNTGVWKAGI*RRTPLPVHFTELVG
Trigger: GCCAACGAGCTCTGTGAAGTGAACCGGAAGGGGTGTCCGTCTGCAGATCCCTGCCTTCCATACTCCTGTGTTCAAGGCTGCAAATTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp CGTAGTAATCCACGGCCACACGATCTGAGTAGGCAGCACACACACTaGTGTATGTCTCACCATTGTGCCCACAGACAGGCTCCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RSNPRPHDLSRQHTH*CMSHHCAHRQAPWL
Trigger: GAGCCAAGGAGCCTGTCTGTGGGCACAATGGTGAGACATACAGCAGTGTGTGTGCTGCCTACTCAGATCGTGTGGCCGTGGATTACTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp AGCGATGCAGGCACTGGGGTAAGTGCGTCCATTCTGTGCACACACTaGGACAAACTGATCTGCGCAGTTACAGGGCAGACCTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SDAGTGVSASILCTH*DKLICAVTGQTCEG
Trigger: ACCTTCACAGGTCTGCCCTGTAACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp CAAACTGATGGTCCTGGAGACCCACACAGCGAGCGATGCAGGCACTaGGGTAAGTGCGTCCATTCTGTGCACACACTGGGACAAACTGAT +
Preference number: 5 (lower is better)
Translates to: QTDGPGDPHSERCRH*GKCVHSVHTLGQTD
Trigger: ATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGGGTCTCCAGGACCATCAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp CACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGCTGCCAAAGAGGATCTaGAGGCAAGGGCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: HSQAQMTTAERPKCETGTLPKRI*RQGLGL
Trigger: AAGACCCAGCCCTTGCCTCAAGATCCTCTTTGGCAG...CGTGCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCACTGATGAAGGGCATCTaGATGCTCCCCTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFALMKGI*MLPFSH
Trigger: GTGGGAGAAGGGGAGCATCAAGATGCCCTTCATCAG...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp AAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGCACCCAGGCAGACTTGTGGTTTaGGCACACATCTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KHMAASALTGTLRRPGHPGRLVV*AHIFGF
Trigger: AAAGCCAAAGATGTGTGCCAAAACCACAAGTCTGCC...TGGGTGCCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACGAGAGGGAAGGACACTaGACAGCAGCACACTCAGCC +
Preference number: 5 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDEREGH*TAAHSA
Trigger: GGCTGAGTGTGCTGCTGTCAAGTGTCCTTCCCTCTC...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp CTTTTCCCTCTTTGGTACAGAGTGCAGAGGTTGCTGTGCTCCATGTaGTCTGTGTCACACACAGGATCTCGGGCCTGGTCACAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LFPLWYRVQRLLCSM*SVSHTGSRAWSQVS
Trigger: GCTCACCTGTGACCAGGCCCGAGATCCTGTGTGTGACACAGATCACATGGAGCACAGCAACCTCTGCACTCTGTACCAAAGAGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp GTGCACAGTTCCCTACAGGTTGAAGTGTTTGCTTTAGAGCAACAGTaGAATTTGGCCCCGTCGAGGCCAGTTGAGGGAGGAGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: VHSSLQVEVFALEQQ*NLAPSRPVEGGGCT
Trigger: TGTGCACCCTCCTCCCTCAACTGGCCTCGACGGGGCCAAATTGCACTGTTGCTCTAAAGCAAACACTTCAACCTGTAGGGAACTGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp AGCCCAACTGGCAAGGCTCCCGGACATCAGCCAGACACGTCAGCATaGACACTTCCACCGGATTATACTCACAGATGCGGTCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: SPTGKAPGHQPDTSA*TLPPDYTHRCGQTL
Trigger: AAGAGTTTGACCGCATCTGTGAGTATAATCCGGTGGAAGTGTCCATGCTGACGTGTCTGGCTGATGTCCGGGAGCCTTGCCAGTTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp ACACACTGCTGTATGTCTCACCATTGTGCCCACAGACAGGCTCCTTaGCTCTGCAGAAAGGCTGGCAAGGGCCTCTGTAAGACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: THCCMSHHCAHRQAP*LCRKAGKGLCKTGF
Trigger: AAAGCCTGTCTTACAGAGGCCCTTGCCAGCCTTTCTGCAGAGCCAAGGAGCCTGTCTGTGGGCACAATGGTGAGACATACAGCAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATCTCTTGCAGGCGTTTaGGCAAGCATGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFASLAGV*ASMVFS
Trigger: GCTGAAGACCATGCTTGCCAAAACGCCTGCAAGAGA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCGATGCGGTCAAACTCTaGCCAACTCTGTGTATTTCC +
Preference number: 5 (lower is better)
Translates to: PHSQAQMTTAERPKCETGDAVKL*PTLCIS
Trigger: GGAAATACACAGAGTTGGCAAGAGTTTGACCGCATC...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCTTCCAAGAGGCCACTTaGTCCACAGGAACAGATCTT +
Preference number: 5 (lower is better)
Translates to: PHSQAQMTTAERPKCETGFQEAT*STGTDL
Trigger: AAGATCTGTTCCTGTGGACAAAGTGGCCTCTTGGAA...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp ACTTCACAGAGCTCGTTGGCTGGGCAGGGGTTTGGGTTACAGGGGTaGGTCACTTCTTCTATGATGTTTCCTAAAGCACTTGGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TSQSSLAGQGFGLQG*VTSSMMFPKALGLR
Trigger: CCTCAGGCCAAGTGCTTTAGGAAACATCATAGAAGAAGTGACTCACCCCTGTAACCCAAACCCCTGCCCAGCCAACGAGCTCTGTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp TTAGGATTACAGGGATTCTTGGAGATACAAGGTCCAAACTCAAACTaGTGGTCCTGGAGACCCACACAGCGAGCGATGCAGGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: LGLQGFLEIQGPNSN*WSWRPTQRAMQALG
Trigger: CCCCAGTGCCTGCATCGCTCGCTGTGTGGGTCTCCAGGACCATCAGTTTGAGTTTGGACCTTGTATCTCCAAGAATCCCTGTAATCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp CCAAACACGTCACACTGCGGCACAGACACGTGCATGCGGACCTTCTaGAGAATCTCCACAACGGTTATGGGCTTCTTGCTTGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: PNTSHCGTDTCMRTF*RISTTVMGFLLVTL
Trigger: TAAGGTGACAAGCAAGAAGCCCATAACCGTTGTGGAGATTCTTCAGAAGGTCCGCATGCACGTGTCTGTGCCGCAGTGTGACGTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp CTCTGTAAGACAGGCTTTTCCCTCTTTGGTACAGAGTGCAGAGGTTaGTGTGCTCCATGTGATCTGTGTCACACACAGGATCTCGGGCCT +
Preference number: 5 (lower is better)
Translates to: LCKTGFSLFGTECRG*CAPCDLCHTQDLGP
Trigger: AGGCCCGAGATCCTGTGTGTGACACAGATCACATGGAGCACAGCAACCTCTGCACTCTGTACCAAAGAGGGAAAAGCCTGTCTTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp GGCAAGGGCCTCTGTAAGACAGGCTTTTCCCTCTTTGGTACAGAGTaGAGAGGTTGCTGTGCTCCATGTGATCTGTGTCACACACAGGAT +
Preference number: 5 (lower is better)
Translates to: GKGLCKTGFSLFGTE*RGCCAPCDLCHTQD
Trigger: ATCCTGTGTGTGACACAGATCACATGGAGCACAGCAACCTCTGCACTCTGTACCAAAGAGGGAAAAGCCTGTCTTACAGAGGCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp TGCTCAAGTATCCAAACACGTCACACTGCGGCACAGACACGTGCATaGGGACCTTCTGAAGAATCTCCACAACGGTTATGGGCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: CSSIQTRHTAAQTRA*GPSEESPQRLWASC
Trigger: GCAAGAAGCCCATAACCGTTGTGGAGATTCTTCAGAAGGTCCGCATGCACGTGTCTGTGCCGCAGTGTGACGTGTTTGGATACTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATACAGTAAGTCAGGTTaGTACAGCCCAACTGGCAAG +
Preference number: 5 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFAYSKSG*YSPTGK
Trigger: CTTGCCAGTTGGGCTGTACAAACCTGACTTACTGTA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACCAGGCTTTTCCCTCTTaGGTACAGAGTGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDQAFPS*VQSAEV
Trigger: AACCTCTGCACTCTGTACCAAAGAGGGAAAAGCCTG...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCACGGTTATGGGCTTCTaGCTTGTCACCTTAGCAATA +
Preference number: 5 (lower is better)
Translates to: PHSQAQMTTAERPKCETGTVMGF*LVTLAI
Trigger: TATTGCTAAGGTGACAAGCAAGAAGCCCATAACCGT...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp CCAGACACGTCAGCATGGACACTTCCACCGGATTATACTCACAGATaGGGTCAAACTCTTGCCAACTCTGTGTATTTCCCCAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: PDTSAWTLPPDYTHR*GQTLANSVYFPSSC
Trigger: GCATGAGCTGGGGAAATACACAGAGTTGGCAAGAGTTTGACCGCATCTGTGAGTATAATCCGGTGGAAGTGTCCATGCTGACGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp TGGTCACCAGCTAGCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGACATTAGAATTCTCTaGCAGGCGTTTTGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: WSPASSPECLSQGGRLGGDIRIL*QAFWQA
Trigger: TGCTTGCCAAAACGCCTGCAAGAGAATTCTAATGTC...TCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGCTAGCTGGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp AGAAACAAGCACATGGCGGCCTCAGCACTCACAGGAACTCTGAGGAGACCAGGGTCTACACAATCTGATTaGCAGATAATACTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: RNKHMAASALTGTLRRPGSTQSD*QIILPR
Trigger: CCGAGGCAGTATTATCTGCAAATCAGATTGTGTAGA...CCCTGGTCTCCTCAGAGTTCCTGTGAGTGCTGAGGCCGCCATGTGCTTGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAGTGGGGCTGTCGGAGTaGATGAGGGACTCGATTTTC +
Preference number: 5 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKVGLSE*MRDSIF
Trigger: GAAAATCGAGTCCCTCATCAACTCCGACAGCCCCAC...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 90 bp CCATGTGATCTGTGTCACACACAGGATCTCGGGCCTGGTCACAGGTaGGCTGTCTGGGCACACACTCATATTGGCTACATCCAAATTTAT +
Preference number: 5 (lower is better)
Translates to: PCDLCHTQDLGPGHR*AVWAHTHIGYIQIY
Trigger: ATAAATTTGGATGTAGCCAATATGAGTGTGTGCCCAGACAGCTCACCTGTGACCAGGCCCGAGATCCTGTGTGTGACACAGATCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp TCTCGGGCCTGGTCACAGGTGAGCTGTCTGGGCACACACTCATATTaGCTACATCCAAATTTATCAAAAGTCGTCAGGCAGACTTGTGGT +
Preference number: 5 (lower is better)
Translates to: SRAWSQVSCLGTHSY*LHPNLSKVVRQTCG
Trigger: ACCACAAGTCTGCCTGACGACTTTTGATAAATTTGGATGTAGCCAATATGAGTGTGTGCCCAGACAGCTCACCTGTGACCAGGCCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GCAGTCCTGAATGTCTTTCACAAGGTGGACGGCTGGGTGGAGGAAGGCTTTGCATGTTCGAAAAATGGCTaGACAGAATTCTCGGCAGTT +
Preference number: 5 (lower is better)
Translates to: AVLNVFHKVDGWVEEGFACSKNG*TEFSAV
Trigger: AACTGCCGAGAATTCTGTCAAGCCATTTTTCGAACA...TGCAAAGCCTTCCTCCACCCAGCCGTCCACCTTGTGAAAGACATTCAGGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp CCCCACTCACAGGCACAAATGACAACTGCTGAGAGGCCCAAGTGTGAGACAGGCTGGTCTCCACATTTCTaGAGAATCTCTACACAATCT +
Preference number: 5 (lower is better)
Translates to: PHSQAQMTTAERPKCETGWSPHF*RISTQS
Trigger: AGATTGTGTAGAGATTCTCAAGAAATGTGGAGACCA...GCCTGTCTCACACTTGGGCCTCTCAGCAGTTGTCATTTGTGCCTGTGAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp ATGGCAGGTAGCGGCTTTTCACTGAGCCCTCAGCCTCCAGACACAGAAACAAGCGGGCACACACTCATATaGGCTACATCCAAATTTATC +
Preference number: 5 (lower is better)
Translates to: MAGSGFSLSPQPPDTETSGHTLI*ATSKFI
Trigger: GATAAATTTGGATGTAGCCAATATGAGTGTGTGCCC...GCTTGTTTCTGTGTCTGGAGGCTGAGGGCTCAGTGAAAAGCCGCTACCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp TCGAAAAATGGCTTGACAGAATTCTCGGCAGTTGGTGTGATGGCCTaGGTAACTGCAGCACACCGAGCCCATTTCATTTCTGCTAATGCA +
Preference number: 5 (lower is better)
Translates to: SKNGLTEFSAVGVMA*VTAAHRAHFISANA
Trigger: TGCATTAGCAGAAATGAAATGGGCTCGGTGTGCTGCAGTTACGCAGGCCATCACACCAACTGCCGAGAATTCTGTCAAGCCATTTTTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAAGTCGTCAGGCAGACTaGTGGTTTTGGCACACATCT +
Preference number: 5 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKSRQAD*WFWHTS
Trigger: AGATGTGTGCCAAAACCACAAGTCTGCCTGACGACT...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACTCCAAATTTCAACCATaGTTTCAGGGCAATAATCTG +
Preference number: 5 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDSKFQP*FQGNNL
Trigger: CAGATTATTGCCCTGAAACAATGGTTGAAATTTGGA...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp ACAAAGGGGGCTGCCTCCTATAAAGTGACCATGCCATTGATCAGGGATGCTAAAACACATCTTTGGCTTTaGGGGCAGAGGTTAGGATTA +
Preference number: 5 (lower is better)
Translates to: TKGAASYKVTMPLIRDAKTHLWL*GQRLGL
Trigger: TAATCCTAACCTCTGCCCCAAAAGCCAAAGATGTGT...TTTAGCATCCCTGATCAATGGCATGGTCACTTTATAGGAGGCAGCCCCCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS-3UTR CAA 90 bp GACTTGGTGAGTACTGGCGAGTGTATCTGGCTAACACAACACGGCAGGCATGACGTGTCCAGTTTTTCTTaGTCAAATAATACCCGTAAC +
Preference number: 5 (lower is better)
Translates to: DLVSTGECIWLTQHGRHDVSSFS*SNNTRN
Trigger: GTTACGGGTATTATTTGACAAAGAAAAACTGGACAC...GTCATGCCTGCCGTGTTGTGTTAGCCAGATACACTCGCCAGTACTCACCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp AGATGCGGTCAAACTCTTGCCAACTCTGTGTATTTCCCCAGCTCATaGTATAAAGTTTGGTGCACAGTTCCCTACAGGTTGAAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RCGQTLANSVYFPSS*YKVWCTVPYRLKCL
Trigger: CAAACACTTCAACCTGTAGGGAACTGTGCACCAAACTTTATAGCATGAGCTGGGGAAATACACAGAGTTGGCAAGAGTTTGACCGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp TTTCTTTTTCCTCCGACAATACAAGACTTCTGGAGGTCGATACAGTaGATTTCCATACAGTTTTCCAAGAGGCCACTTTGTCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: FLFPPTIQDFWRSIQ*ISIQFSKRPLCPQE
Trigger: TTCCTGTGGACAAAGTGGCCTCTTGGAAAACTGTATGGAAATGCACTGTATCGACCTCCAGAAGTCTTGTATTGTCGGAGGAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp TGGACTGATAGAGGCACAATAATTTTCCACTGCTTTGATCTGAGATaGCCCAGGAGAAGAGTCTGTTCGAAAAATGGCTTGACAGAATTC +
Preference number: 5 (lower is better)
Translates to: WTDRGTIIFHCFDLR*PRRRVCSKNGLTEF
Trigger: GAATTCTGTCAAGCCATTTTTCGAACAGACTCTTCTCCTGGGCCATCTCAGATCAAAGCAGTGGAAAATTATTGTGCCTCTATCAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 90 bp ACAGTGTATCAACTGTGGACTGATAGAGGCACAATAATTTTCCACTaGTTTGATCTGAGATGGCCCAGGAGAAGAGTCTGTTCGAAAAAT +
Preference number: 5 (lower is better)
Translates to: TVYQLWTDRGTIIFH*FDLRWPRRRVCSKN
Trigger: ATTTTTCGAACAGACTCTTCTCCTGGGCCATCTCAGATCAAAGCAGTGGAAAATTATTGTGCCTCTATCAGTCCACAGTTGATACACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp CATTGGATAAGACTGGGTGTAATTATTCACACAGTGTATCAACTGTaGACTGATAGAGGCACAATAATTTTCCACTGCTTTGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: HWIRLGVIIHTVYQL*TDRGTIIFHCFDLR
Trigger: TCTCAGATCAAAGCAGTGGAAAATTATTGTGCCTCTATCAGTCCACAGTTGATACACTGTGTGAATAATTACACCCAGTCTTATCCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 90 bp AACTCACAGATACTTTCAGCTGTGTGTTCTTCAGGGAATTTATTCTaGTCTCCACATTTCTTGAGAATCTCTACACAATCTGATTTGCAG +
Preference number: 5 (lower is better)
Translates to: NSQILSAVCSSGNLF*SPHFLRISTQSDLQ
Trigger: CTGCAAATCAGATTGTGTAGAGATTCTCAAGAAATGTGGAGACCAGAATAAATTCCCTGAAGAACACACAGCTGAAAGTATCTGTGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp GGAGACCTGCACTTGGGAAATGATGAGGGCCGAGAGTaGGACGTGGGACGCCAGCGTGGGGCTGTCGGAGTT +
Preference number: 6 (lower is better)
Translates to: GDLHLGNDEGRE*DVGRQRGAVGV
Trigger: AACTCCGACAGCCCCACGCTGGCGTCCCACGTCCCACTCTCGGCCCTCATCATTTCCCAAGTGCAGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp ACAGGGCAGACCTGTGAAGGTGCGGCGGTCGTCGTCTaGACTGTGCTCACTGAGGCACAGGCGGGTGGAACA +
Preference number: 6 (lower is better)
Translates to: TGQTCEGAAVVV*TVLTEAQAGGT
Trigger: TGTTCCACCCGCCTGTGCCTCAGTGAGCACAGTTCAGACGACGACCGCCGCACCTTCACAGGTCTGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp TGCACTTGGGAAATGATGAGGGCCGAGAGTGGGACGTaGGACGCCAGCGTGGGGCTGTCGGAGTTGATGAGG +
Preference number: 6 (lower is better)
Translates to: CTWEMMRAESGT*DASVGLSELMR
Trigger: CCTCATCAACTCCGACAGCCCCACGCTGGCGTCCCACGTCCCACTCTCGGCCCTCATCATTTCCCAAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp AGGGCCGAGAGTGGGACGTGGGACGCCAGCGTGGGGCTGTCGGAGTaGATGAGGGACTCGATTTTCTCTGCCTCCTTATTGCAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: RAESGTWDASVGLSE*MRDSIFSASLLQAS
Trigger: TGAGGCCTGCAATAAGGAGGCAGAGAAAATCGAGTCCCTCATCAACTCCGACAGCCCCACGCTGGCGTCCCACGTCCCACTCTCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp GGTCCTGGAGACCCACACAGCGAGCGATGCAGGCACTaGGGTAAGTGCGTCCATTCTGTGCACACACTGGGA +
Preference number: 6 (lower is better)
Translates to: GPGDPHSERCRH*GKCVHSVHTLG
Trigger: TCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGGGTCTCCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp AGAGCAACAGTGCAATTTGGCCCCGTCGAGGCCAGTTaGGGGAGGAGGGTGCACAGTGACTCCAGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: RATVQFGPVEAS*GRRVHSDSRVN
Trigger: GTTCACCCTGGAGTCACTGTGCACCCTCCTCCCTCAACTGGCCTCGACGGGGCCAAATTGCACTGTTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp ATACTGCCTCGGGATTTGCTATGGCACGGCTTGATCTaGAGGGAGCAGGCCACGGCCTTCCACATCTCTGGC +
Preference number: 6 (lower is better)
Translates to: ILPRDLLWHGLI*REQATAFHISG
Trigger: GCCAGAGATGTGGAAGGCCGTGGCCTGCTCCCTGCAGATCAAGCCGTGCCATAGCAAATCCCGAGGCAGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp TGCAGGGAGCAGGCCACGGCCTTCCACATCTCTGGCTaGCAGGTCTTGATGTCTAGGACAGGGATGCTGATG +
Preference number: 6 (lower is better)
Translates to: CREQATAFHISG*QVLMSRTGMLM
Trigger: CATCAGCATCCCTGTCCTAGACATCAAGACCTGCCAGCCAGAGATGTGGAAGGCCGTGGCCTGCTCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp TGCAGGGAGCAGGCCACGGCCTTCCACATCTCTGGCTGGCAGGTCTaGATGTCTAGGACAGGGATGCTGATGAAGGGCATCTTGATGCTC +
Preference number: 6 (lower is better)
Translates to: CREQATAFHISGWQV*MSRTGMLMKGILML
Trigger: GAGCATCAAGATGCCCTTCATCAGCATCCCTGTCCTAGACATCAAGACCTGCCAGCCAGAGATGTGGAAGGCCGTGGCCTGCTCCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CTGGCAGGGCCCGTAGTAATCCACGGCCACACGATCTaGGTAGGCAGCACACACACTGCTGTATGTCTCACC +
Preference number: 6 (lower is better)
Translates to: LAGPVVIHGHTI*VGSTHTAVCLT
Trigger: GGTGAGACATACAGCAGTGTGTGTGCTGCCTACTCAGATCGTGTGGCCGTGGATTACTACGGGCCCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp TCCCAGCACATAGTGGACAGCAAGCCCCTGGTGGGATaGTGGGTTTGCAGCCTATGGCTGAGAGGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SQHIVDSKPLVG*WVCSLWLRGKD
Trigger: GTCCTTCCCTCTCAGCCATAGGCTGCAAACCCATCATCCCACCAGGGGCTTGCTGTCCACTATGTGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp TCCACAGGAACAGATCTTGTAGCAACCAACTTCCCCTaGAGAGGACGGCACCTGGATCAGTGTCCCCTGGCG +
Preference number: 6 (lower is better)
Translates to: STGTDLVATNFP*RGRHLDQCPLA
Trigger: CGCCAGGGGACACTGATCCAGGTGCCGTCCTCTGCAGGGGAAGTTGGTTGCTACAAGATCTGTTCCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp AGACCTGTGAAGGTGCGGCGGTCGTCGTCTGAACTGTaGTCACTGAGGCACAGGCGGGTGGAACACACTAAA +
Preference number: 6 (lower is better)
Translates to: RPVKVRRSSSEL*SLRHRRVEHTK
Trigger: TTTAGTGTGTTCCACCCGCCTGTGCCTCAGTGAGCACAGTTCAGACGACGACCGCCGCACCTTCACAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp GCGTCCATTCTGTGCACACACTGGGACAAACTGATCTaGGCAGTTACAGGGCAGACCTGTGAAGGTGCGGCG +
Preference number: 6 (lower is better)
Translates to: ASILCTHWDKLI*AVTGQTCEGAA
Trigger: CGCCGCACCTTCACAGGTCTGCCCTGTAACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp CAAACTGATGGTCCTGGAGACCCACACAGCGAGCGATaGAGGCACTGGGGTAAGTGCGTCCATTCTGTGCAC +
Preference number: 6 (lower is better)
Translates to: QTDGPGDPHSER*RHWGKCVHSVH
Trigger: GTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGGGTCTCCAGGACCATCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp CAGGCCACGGCCTTCCACATCTCTGGCTGGCAGGTCTaGATGTCTAGGACAGGGATGCTGATGAAGGGCATC +
Preference number: 6 (lower is better)
Translates to: QATAFHISGWQV*MSRTGMLMKGI
Trigger: GATGCCCTTCATCAGCATCCCTGTCCTAGACATCAAGACCTGCCAGCCAGAGATGTGGAAGGCCGTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp GCAGCCTTGAACACAGGAGTATGGAAGGCAGGGATCTaGAGACGGACACCCCTTCCGGTTCACTTCACAGAG +
Preference number: 6 (lower is better)
Translates to: AALNTGVWKAGI*RRTPLPVHFTE
Trigger: CTCTGTGAAGTGAACCGGAAGGGGTGTCCGTCTGCAGATCCCTGCCTTCCATACTCCTGTGTTCAAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp GACCCACACAGCGAGCGATGCAGGCACTGGGGTAAGTaGGTCCATTCTGTGCACACACTGGGACAAACTGAT +
Preference number: 6 (lower is better)
Translates to: DPHSERCRHWGK*VHSVHTLGQTD
Trigger: ATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCTCGCTGTGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp CCACGGCCACACGATCTGAGTAGGCAGCACACACACTaGTGTATGTCTCACCATTGTGCCCACAGACAGGCT +
Preference number: 6 (lower is better)
Translates to: PRPHDLSRQHTH*CMSHHCAHRQA
Trigger: AGCCTGTCTGTGGGCACAATGGTGAGACATACAGCAGTGTGTGTGCTGCCTACTCAGATCGTGTGGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp GGCAAGGCTCCCGGACATCAGCCAGACACGTCAGCATaGACACTTCCACCGGATTATACTCACAGATGCGGT +
Preference number: 6 (lower is better)
Translates to: GKAPGHQPDTSA*TLPPDYTHRCG
Trigger: ACCGCATCTGTGAGTATAATCCGGTGGAAGTGTCCATGCTGACGTGTCTGGCTGATGTCCGGGAGCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp GGCACTGGGGTAAGTGCGTCCATTCTGTGCACACACTaGGACAAACTGATCTGCGCAGTTACAGGGCAGACC +
Preference number: 6 (lower is better)
Translates to: GTGVSASILCTH*DKLICAVTGQT
Trigger: GGTCTGCCCTGTAACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp TCTGATTTGCAGATAATACTGCCTCGGGATTTGCTATGGCACGGCTaGATCTGCAGGGAGCAGGCCACGGCCTTCCACATCTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SDLQIILPRDLLWHG*ICREQATAFHISGW
Trigger: CCAGCCAGAGATGTGGAAGGCCGTGGCCTGCTCCCTGCAGATCAAGCCGTGCCATAGCAAATCCCGAGGCAGTATTATCTGCAAATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CCAGTTGAGGGAGGAGGGTGCACAGTGACTCCAGGGTaGACCGACTGTGAGCTTTCGAGAAAACACTGCCAA +
Preference number: 6 (lower is better)
Translates to: PVEGGGCTVTPG*TDCELSRKHCQ
Trigger: TTGGCAGTGTTTTCTCGAAAGCTCACAGTCGGTTCACCCTGGAGTCACTGTGCACCCTCCTCCCTCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CTGTGTCACACACAGGATCTCGGGCCTGGTCACAGGTaGGCTGTCTGGGCACACACTCATATTGGCTACATC +
Preference number: 6 (lower is better)
Translates to: LCHTQDLGPGHR*AVWAHTHIGYI
Trigger: GATGTAGCCAATATGAGTGTGTGCCCAGACAGCTCACCTGTGACCAGGCCCGAGATCCTGTGTGTGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp TCTGATTTGCAGATAATACTGCCTCGGGATTTGCTATaGCACGGCTTGATCTGCAGGGAGCAGGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: SDLQIILPRDLL*HGLICREQATA
Trigger: GGCCGTGGCCTGCTCCCTGCAGATCAAGCCGTGCCATAGCAAATCCCGAGGCAGTATTATCTGCAAATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp CAGGTTGAAGTGTTTGCTTTAGAGCAACAGTGCAATTaGGCCCCGTCGAGGCCAGTTGAGGGAGGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: QVEVFALEQQCN*APSRPVEGGGC
Trigger: GCACCCTCCTCCCTCAACTGGCCTCGACGGGGCCAAATTGCACTGTTGCTCTAAAGCAAACACTTCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CTTTGGTACAGAGTGCAGAGGTTGCTGTGCTCCATGTaGTCTGTGTCACACACAGGATCTCGGGCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: LWYRVQRLLCSM*SVSHTGSRAWS
Trigger: TGACCAGGCCCGAGATCCTGTGTGTGACACAGATCACATGGAGCACAGCAACCTCTGCACTCTGTACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp AGCGATGCAGGCACTGGGGTAAGTGCGTCCATTCTGTaGACACACTGGGACAAACTGATCTGCGCAGTTACA +
Preference number: 6 (lower is better)
Translates to: SDAGTGVSASIL*THWDKLICAVT
Trigger: TGTAACTGCGCAGATCAGTTTGTCCCAGTGTGTGCACAGAATGGACGCACTTACCCCAGTGCCTGCATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp AGTTCCCTACAGGTTGAAGTGTTTGCTTTAGAGCAACAGTGCAATTaGGCCCCGTCGAGGCCAGTTGAGGGAGGAGGGTGCACAGTGACT +
Preference number: 6 (lower is better)
Translates to: SSLQVEVFALEQQCN*APSRPVEGGGCTVT
Trigger: AGTCACTGTGCACCCTCCTCCCTCAACTGGCCTCGACGGGGCCAAATTGCACTGTTGCTCTAAAGCAAACACTTCAACCTGTAGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp GCAGAAAGGCTGGCAAGGGCCTCTGTAAGACAGGCTTTTCCCTCTTaGGTACAGAGTGCAGAGGTTGCTGTGCTCCATGTGATCTGTGTC +
Preference number: 6 (lower is better)
Translates to: AERLARASVRQAFPS*VQSAEVAVLHVICV
Trigger: GACACAGATCACATGGAGCACAGCAACCTCTGCACTCTGTACCAAAGAGGGAAAAGCCTGTCTTACAGAGGCCCTTGCCAGCCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp AGGAGGGTGCACAGTGACTCCAGGGTGAACCGACTGTaGGCTTTCGAGAAAACACTGCCAAAGAGGATCTTG +
Preference number: 6 (lower is better)
Translates to: RRVHSDSRVNRL*AFEKTLPKRIL
Trigger: CAAGATCCTCTTTGGCAGTGTTTTCTCGAAAGCTCACAGTCGGTTCACCCTGGAGTCACTGTGCACCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CAGGGATTCTTGGAGATACAAGGTCCAAACTCAAACTaGTGGTCCTGGAGACCCACACAGCGAGCGATGCAG +
Preference number: 6 (lower is better)
Translates to: QGFLEIQGPNSN*WSWRPTQRAMQ
Trigger: CTGCATCGCTCGCTGTGTGGGTCTCCAGGACCATCAGTTTGAGTTTGGACCTTGTATCTCCAAGAATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp TCACACTGCGGCACAGACACGTGCATGCGGACCTTCTaGAGAATCTCCACAACGGTTATGGGCTTCTTGCTT +
Preference number: 6 (lower is better)
Translates to: SHCGTDTCMRTF*RISTTVMGFLL
Trigger: AAGCAAGAAGCCCATAACCGTTGTGGAGATTCTTCAGAAGGTCCGCATGCACGTGTCTGTGCCGCAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp TCCCTACAGGTTGAAGTGTTTGCTTTAGAGCAACAGTaGAATTTGGCCCCGTCGAGGCCAGTTGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: SLQVEVFALEQQ*NLAPSRPVEGG
Trigger: TCCTCCCTCAACTGGCCTCGACGGGGCCAAATTGCACTGTTGCTCTAAAGCAAACACTTCAACCTGTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp ATCCAAACACGTCACACTGCGGCACAGACACGTGCATaGGGACCTTCTGAAGAATCTCCACAACGGTTATGG +
Preference number: 6 (lower is better)
Translates to: IQTRHTAAQTRA*GPSEESPQRLW
Trigger: CCATAACCGTTGTGGAGATTCTTCAGAAGGTCCGCATGCACGTGTCTGTGCCGCAGTGTGACGTGTTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp AGGAGAAAATCTGCTCACATACATCACGGCACATTTGGTTATCTTTaGAATGATTACAGCATACAGCACCCGCGCTGCCCGGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRKSAHIHHGTFGYL*NDYSIQHPRCPGPG
Trigger: GCCTGGCCCCGGGCAGCGCGGGTGCTGTATGCTGTAATCATTCAAAAGATAACCAAATGTGCCGTGATGTATGTGAGCAGATTTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp TCACATACATCACGGCACATTTGGTTATCTTTTGAATaGTTACAGCATACAGCACCCGCGCTGCCCGGGGCC +
Preference number: 6 (lower is better)
Translates to: SHTSRHIWLSFE*LQHTAPALPGA
Trigger: GGCCCCGGGCAGCGCGGGTGCTGTATGCTGTAATCATTCAAAAGATAACCAAATGTGCCGTGATGTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp GTACGTGTCCAGAGGGATACAGCTCTCCAGGTCATCTaGAGGGGACAGAAACTCACAGATACTTTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: VRVQRDTALQVI*RGQKLTDTFSC
Trigger: ACAGCTGAAAGTATCTGTGAGTTTCTGTCCCCTGCAGATGACCTGGAGAGCTGTATCCCTCTGGACACGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp GGGGCTGTCGGAGTTGATGAGGGACTCGATTTTCTCTaGCTCCTTATTGCAGGCCTCAATCTGCAAAGCTTT +
Preference number: 6 (lower is better)
Translates to: GAVGVDEGLDFL*LLIAGLNLQSF
Trigger: AAAGCTTTGCAGATTGAGGCCTGCAATAAGGAGGCAGAGAAAATCGAGTCCCTCATCAACTCCGACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp GTTCACTTCACAGAGCTCGTTGGCTGGGCAGGGGTTTaGGTTACAGGGGTGAGTCACTTCTTCTATGATGTT +
Preference number: 6 (lower is better)
Translates to: VHFTELVGWAGV*VTGVSHFFYDV
Trigger: AACATCATAGAAGAAGTGACTCACCCCTGTAACCCAAACCCCTGCCCAGCCAACGAGCTCTGTGAAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp AGATGGCCCAGGAGAAGAGTCTGTTCGAAAAATGGCTaGACAGAATTCTCGGCAGTTGGTGTGATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RWPRRRVCSKNG*TEFSAVGVMAC
Trigger: GCAGGCCATCACACCAACTGCCGAGAATTCTGTCAAGCCATTTTTCGAACAGACTCTTCTCCTGGGCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp TTGATGTCTAGGACAGGGATGCTGATGAAGGGCATCTaGATGCTCCCCTTCTCCCACAGCTTCATGTCACTC +
Preference number: 6 (lower is better)
Translates to: LMSRTGMLMKGI*MLPFSHSFMSL
Trigger: GAGTGACATGAAGCTGTGGGAGAAGGGGAGCATCAAGATGCCCTTCATCAGCATCCCTGTCCTAGACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp ACACAATCTGATTTGCAGATAATACTGCCTCGGGATTaGCTATGGCACGGCTTGATCTGCAGGGAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: TQSDLQIILPRD*LWHGLICREQA
Trigger: GGCCTGCTCCCTGCAGATCAAGCCGTGCCATAGCAAATCCCGAGGCAGTATTATCTGCAAATCAGATTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp ATCTCGGGCCTGGTCACAGGTGAGCTGTCTGGGCACACACTCATATaGGCTACATCCAAATTTATCAAAAGTCGTCAGGCAGACTTGTGG +
Preference number: 6 (lower is better)
Translates to: ISGLVTGELSGHTLI*ATSKFIKSRQADLW
Trigger: CCACAAGTCTGCCTGACGACTTTTGATAAATTTGGATGTAGCCAATATGAGTGTGTGCCCAGACAGCTCACCTGTGACCAGGCCCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CTGCTCACATACATCACGGCACATTTGGTTATCTTTTaGATGATTACAGCATACAGCACCCGCGCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: LLTYITAHLVIF*MITAYSTRAAR
Trigger: CCGGGCAGCGCGGGTGCTGTATGCTGTAATCATTCAAAAGATAACCAAATGTGCCGTGATGTATGTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp AGCTCGTTGGCTGGGCAGGGGTTTGGGTTACAGGGGTaGGTCACTTCTTCTATGATGTTTCCTAAAGCACTT +
Preference number: 6 (lower is better)
Translates to: SSLAGQGFGLQG*VTSSMMFPKAL
Trigger: AAGTGCTTTAGGAAACATCATAGAAGAAGTGACTCACCCCTGTAACCCAAACCCCTGCCCAGCCAACGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp ACAGGCTTTTCCCTCTTTGGTACAGAGTGCAGAGGTTaGTGTGCTCCATGTGATCTGTGTCACACACAGGAT +
Preference number: 6 (lower is better)
Translates to: TGFSLFGTECRG*CAPCDLCHTQD
Trigger: ATCCTGTGTGTGACACAGATCACATGGAGCACAGCAACCTCTGCACTCTGTACCAAAGAGGGAAAAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp TTTGATCTGAGATGGCCCAGGAGAAGAGTCTGTTCGAAAAATGGCTaGACAGAATTCTCGGCAGTTGGTGTGATGGCCTGCGTAACTGCA +
Preference number: 6 (lower is better)
Translates to: FDLRWPRRRVCSKNG*TEFSAVGVMACVTA
Trigger: TGCAGTTACGCAGGCCATCACACCAACTGCCGAGAATTCTGTCAAGCCATTTTTCGAACAGACTCTTCTCCTGGGCCATCTCAGATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp TGTGAGCTTTCGAGAAAACACTGCCAAAGAGGATCTTaGGGCAAGGGCTGGGTCTTACAACCCTCAATGAGA +
Preference number: 6 (lower is better)
Translates to: CELSRKHCQRGS*GKGWVLQPSMR
Trigger: TCTCATTGAGGGTTGTAAGACCCAGCCCTTGCCTCAAGATCCTCTTTGGCAGTGTTTTCTCGAAAGCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp GAGGTCGATACAGTGCATTTCCATACAGTTTTCCAAGAGGCCACTTaGTCCACAGGAACAGATCTTGTAGCAACCAACTTCCCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: EVDTVHFHTVFQEAT*STGTDLVATNFPCR
Trigger: TCTGCAGGGGAAGTTGGTTGCTACAAGATCTGTTCCTGTGGACAAAGTGGCCTCTTGGAAAACTGTATGGAAATGCACTGTATCGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp TGGTCACAGGTGAGCTGTCTGGGCACACACTCATATTaGCTACATCCAAATTTATCAAAAGTCGTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: WSQVSCLGTHSY*LHPNLSKVVRQ
Trigger: CTGCCTGACGACTTTTGATAAATTTGGATGTAGCCAATATGAGTGTGTGCCCAGACAGCTCACCTGTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp CTGGTCACAGGTGAGCTGTCTGGGCACACACTCATATaGGCTACATCCAAATTTATCAAAAGTCGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: LVTGELSGHTLI*ATSKFIKSRQA
Trigger: TGCCTGACGACTTTTGATAAATTTGGATGTAGCCAATATGAGTGTGTGCCCAGACAGCTCACCTGTGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp CATGGACACTTCCACCGGATTATACTCACAGATGCGGTCAAACTCTaGCCAACTCTGTGTATTTCCCCAGCTCATGCTATAAAGTTTGGT +
Preference number: 6 (lower is better)
Translates to: HGHFHRIILTDAVKL*PTLCISPAHAIKFG
Trigger: ACCAAACTTTATAGCATGAGCTGGGGAAATACACAGAGTTGGCAAGAGTTTGACCGCATCTGTGAGTATAATCCGGTGGAAGTGTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS GCA 72 bp CAACTGTGGACTGATAGAGGCACAATAATTTTCCACTaGTTTGATCTGAGATGGCCCAGGAGAAGAGTCTGT +
Preference number: 6 (lower is better)
Translates to: QLWTDRGTIIFH*FDLRWPRRRVC
Trigger: ACAGACTCTTCTCCTGGGCCATCTCAGATCAAAGCAGTGGAAAATTATTGTGCCTCTATCAGTCCACAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp TTCCACCGGATTATACTCACAGATGCGGTCAAACTCTaGCCAACTCTGTGTATTTCCCCAGCTCATGCTATA +
Preference number: 6 (lower is better)
Translates to: FHRIILTDAVKL*PTLCISPAHAI
Trigger: TATAGCATGAGCTGGGGAAATACACAGAGTTGGCAAGAGTTTGACCGCATCTGTGAGTATAATCCGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp AGAGGCACAATAATTTTCCACTGCTTTGATCTGAGATaGCCCAGGAGAAGAGTCTGTTCGAAAAATGGCTTG +
Preference number: 6 (lower is better)
Translates to: RGTIIFHCFDLR*PRRRVCSKNGL
Trigger: CAAGCCATTTTTCGAACAGACTCTTCTCCTGGGCCATCTCAGATCAAAGCAGTGGAAAATTATTGTGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp TGCCTCCTTATTGCAGGCCTCAATCTGCAAAGCTTTTaGGTAATGGTCCACAGGAATAATGAGGATCACAAT +
Preference number: 6 (lower is better)
Translates to: CLLIAGLNLQSF*VMVHRNNEDHN
Trigger: ATTGTGATCCTCATTATTCCTGTGGACCATTACCCAAAAGCTTTGCAGATTGAGGCCTGCAATAAGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp CTCTCTGCAACAGATGTTTCAGTCGGGATTCACTTTTaGAGGAGAAAATCTGCTCACATACATCACGGCACA +
Preference number: 6 (lower is better)
Translates to: LSATDVSVGIHF*RRKSAHIHHGT
Trigger: TGTGCCGTGATGTATGTGAGCAGATTTTCTCCTCAAAAAGTGAATCCCGACTGAAACATCTGTTGCAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp ACAGTGCATTTCCATACAGTTTTCCAAGAGGCCACTTaGTCCACAGGAACAGATCTTGTAGCAACCAACTTC +
Preference number: 6 (lower is better)
Translates to: TVHFHTVFQEAT*STGTDLVATNF
Trigger: GAAGTTGGTTGCTACAAGATCTGTTCCTGTGGACAAAGTGGCCTCTTGGAAAACTGTATGGAAATGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp TCTCTGCAACAGATGTTTCAGTCGGGATTCACTTTTTaGGGAGAAAATCTGCTCACATACATCACGGCACAT +
Preference number: 6 (lower is better)
Translates to: SLQQMFQSGFTF*GENLLTYITAH
Trigger: ATGTGCCGTGATGTATGTGAGCAGATTTTCTCCTCAAAAAGTGAATCCCGACTGAAACATCTGTTGCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS TCA 72 bp CATGCTATAAAGTTTGGTGCACAGTTCCCTACAGGTTaGAGTGTTTGCTTTAGAGCAACAGTGCAATTTGGC +
Preference number: 6 (lower is better)
Translates to: HAIKFGAQFPTG*SVCFRATVQFG
Trigger: GCCAAATTGCACTGTTGCTCTAAAGCAAACACTTCAACCTGTAGGGAACTGTGCACCAAACTTTATAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp AACTCTGTGTATTTCCCCAGCTCATGCTATAAAGTTTaGTGCACAGTTCCCTACAGGTTGAAGTGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: NSVYFPSSCYKV*CTVPYRLKCLL
Trigger: AAGCAAACACTTCAACCTGTAGGGAACTGTGCACCAAACTTTATAGCATGAGCTGGGGAAATACACAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp TTATTCTGGTCTCCACATTTCTTGAGAATCTCTACACAATCTGATTaGCAGATAATACTGCCTCGGGATTTGCTATGGCACGGCTTGATC +
Preference number: 6 (lower is better)
Translates to: LFWSPHFLRISTQSD*QIILPRDLLWHGLI
Trigger: GATCAAGCCGTGCCATAGCAAATCCCGAGGCAGTATTATCTGCAAATCAGATTGTGTAGAGATTCTCAAGAAATGTGGAGACCAGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp ATGGGCTTCTTGCTTGTCACCTTAGCAATAGTGTCCAGTTTTTCTTaGTCAAATAATACCCGTAACATCCCAGCACATAGTGGACAGCAA +
Preference number: 6 (lower is better)
Translates to: MGFLLVTLAIVSSFS*SNNTRNIPAHSGQQ
Trigger: TTGCTGTCCACTATGTGCTGGGATGTTACGGGTATTATTTGACAAAGAAAAACTGGACACTATTGCTAAGGTGACAAGCAAGAAGCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp GACATTAGAATTCTCTTGCAGGCGTTTTGGCAAGCATaGTCTTCAGCTCTGTCACAGCAATATAAACTATCA +
Preference number: 6 (lower is better)
Translates to: DIRILLQAFWQA*SSALSQQYKLS
Trigger: TGATAGTTTATATTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAACGCCTGCAAGAGAATTCTAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp TCTCCACATTTCTTGAGAATCTCTACACAATCTGATTaGCAGATAATACTGCCTCGGGATTTGCTATGGCAC +
Preference number: 6 (lower is better)
Translates to: SPHFLRISTQSD*QIILPRDLLWH
Trigger: GTGCCATAGCAAATCCCGAGGCAGTATTATCTGCAAATCAGATTGTGTAGAGATTCTCAAGAAATGTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp TCAGCTGTGTGTTCTTCAGGGAATTTATTCTGGTCTCCACATTTCTaGAGAATCTCTACACAATCTGATTTGCAGATAATACTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: SAVCSSGNLFWSPHF*RISTQSDLQIILPR
Trigger: CCGAGGCAGTATTATCTGCAAATCAGATTGTGTAGAGATTCTCAAGAAATGTGGAGACCAGAATAAATTCCCTGAAGAACACACAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 90 bp CTTCAGCTCTGTCACAGCAATATAAACTATCAGTTGGGTTTCTCATaGGATAAGACTGGGTGTAATTATTCACACAGTGTATCAACTGTG +
Preference number: 6 (lower is better)
Translates to: LQLCHSNINYQLGFS*DKTGCNYSHSVSTV
Trigger: CACAGTTGATACACTGTGTGAATAATTACACCCAGTCTTATCCAATGAGAAACCCAACTGATAGTTTATATTGCTGTGACAGAGCTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CCA 72 bp ATACTTTCAGCTGTGTGTTCTTCAGGGAATTTATTCTaGTCTCCACATTTCTTGAGAATCTCTACACAATCT +
Preference number: 6 (lower is better)
Translates to: ILSAVCSSGNLF*SPHFLRISTQS
Trigger: AGATTGTGTAGAGATTCTCAAGAAATGTGGAGACCAGAATAAATTCCCTGAAGAACACACAGCTGAAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp TGTCACAGCAATATAAACTATCAGTTGGGTTTCTCATaGGATAAGACTGGGTGTAATTATTCACACAGTGTA +
Preference number: 6 (lower is better)
Translates to: CHSNINYQLGFS*DKTGCNYSHSV
Trigger: TACACTGTGTGAATAATTACACCCAGTCTTATCCAATGAGAAACCCAACTGATAGTTTATATTGCTGTGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7
CDS CAA 72 bp TGTTCTTCAGGGAATTTATTCTGGTCTCCACATTTCTaGAGAATCTCTACACAATCTGATTTGCAGATAATA +
Preference number: 6 (lower is better)
Translates to: CSSGNLFWSPHF*RISTQSDLQII
Trigger: TATTATCTGCAAATCAGATTGTGTAGAGATTCTCAAGAAATGTGGAGACCAGAATAAATTCCCTGAAGAACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030198.7