RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REC8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002324

Ensembl transcript IDs: ENSMUST00000002395.8

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CAGAATAATAACTGGCGCCGCCGGTGTCGGCGGGGAAGTGGCCTCTaGAGAGACGGGAGCCTCTTCTCTGTACTGGGTGGGGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: QNNNWRRRCRRGSGL*RDGSLFSVLGGAGS
Trigger: GCTGCCTGCCCCACCCAGTACAGAGAAGAGGCTCCCGTCTCTTCAGAGGCCACTTCCCCGCCGACACCGGCGGCGCCAGTTATTATTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 90 bp TCTAGGGAGAGCTCTGAAGACAGCATGAGGGGACCACTGGGCTCCTaGGCCTCCCTCAGAACCTCGATCTCGCTCAGAGCTTCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: SRESSEDSMRGPLGS*ASLRTSISLRASVF
Trigger: AAAGACTGAAGCTCTGAGCGAGATCGAGGTTCTGAGGGAGGCCCAGGAGCCCAGTGGTCCCCTCATGCTGTCTTCAGAGCTCTCCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS TCA 90 bp TCCAGTGGTAGTGAAGCTCTCCGCTGTCGGAGAAGCCTGCCTCTCTaGCGTTCCTCTAGCAAGATGGCGTCATCTTTCTCTGCGATCAGC +
Preference number: 5 (lower is better)
Translates to: SSGSEALRCRRSLPL*RSSSKMASSFSAIS
Trigger: GCTGATCGCAGAGAAAGATGACGCCATCTTGCTAGAGGAACGTCAGAGAGGCAGGCTTCTCCGACAGCGGAGAGCTTCACTACCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 90 bp ATCTGCTGCTCTCTCTTCCTCCACTGTCTCCTCAGTCTCCAGCTGTaGCCTTTGTCTGAGCATTCTTTGGGGGACCTGGGCACAGTGTGT +
Preference number: 5 (lower is better)
Translates to: ICCSLFLHCLLSLQL*PLSEHSLGDLGTVC
Trigger: ACACACTGTGCCCAGGTCCCCCAAAGAATGCTCAGACAAAGGCCACAGCTGGAGACTGAGGAGACAGTGGAGGAAGAGAGAGCAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 90 bp GCCTCCTCCATATCAATGCGAATCCGCAGCTGGGCACGATGTAGGTaGTCCAGGATATGCTGGATGTCTTCCACAAGGTACTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: ASSISMRIRSWARCR*SRICWMSSTRYWHC
Trigger: ACAGTGCCAGTACCTTGTGGAAGACATCCAGCATATCCTGGAGCACCTACATCGTGCCCAGCTGCGGATTCGCATTGATATGGAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 90 bp TCCGCTGTCGGAGAAGCCTGCCTCTCTGACGTTCCTCTAGCAAGATaGCGTCATCTTTCTCTGCGATCAGCAGTTCTAAGTCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: SAVGEACLSDVPLAR*RHLSLRSAVLSLLD
Trigger: GTCGAGGAGACTTAGAACTGCTGATCGCAGAGAAAGATGACGCCATCTTGCTAGAGGAACGTCAGAGAGGCAGGCTTCTCCGACAGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 90 bp ACTGTCTCCTCAGTCTCCAGCTGTGGCCTTTGTCTGAGCATTCTTTaGGGGACCTGGGCACAGTGTGTCCATAAACCTAGGAGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TVSSVSSCGLCLSIL*GTWAQCVHKPRSSG
Trigger: CCCAGAACTCCTAGGTTTATGGACACACTGTGCCCAGGTCCCCCAAAGAATGCTCAGACAAAGGCCACAGCTGGAGACTGAGGAGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 90 bp TCTTTACCACATTCACATTTAGGTATTCACGCTTCACCAAACGGCTaGCTCGGGTTGCTGCCAGCCAGATGGTGGCGAAGCAGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: SLPHSHLGIHASPNG*LGLLPARWWRSSLC
Trigger: ACACAGGCTGCTTCGCCACCATCTGGCTGGCAGCAACCCGAGGCAGCCGTTTGGTGAAGCGTGAATACCTAAATGTGAATGTGGTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 90 bp AAGCTAGGTAGGTCAGCCTCCTCCATATCAATGCGAATCCGCAGCTaGGCACGATGTAGGTGCTCCAGGATATGCTGGATGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: KLGRSASSISMRIRS*ARCRCSRICWMSST
Trigger: TGTGGAAGACATCCAGCATATCCTGGAGCACCTACATCGTGCCCAGCTGCGGATTCGCATTGATATGGAGGAGGCTGACCTACCTAGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS TCA 90 bp TGGCGTCATCTTTCTCTGCGATCAGCAGTTCTAAGTCTCCTCGACTaGTCTCTGGGAGATCCTGCTCTCCTTCAATCTGCAGCATGCGGA +
Preference number: 5 (lower is better)
Translates to: WRHLSLRSAVLSLLD*SLGDPALLQSAACG
Trigger: TCCGCATGCTGCAGATTGAAGGAGAGCAGGATCTCCCAGAGATCAGTCGAGGAGACTTAGAACTGCTGATCGCAGAGAAAGATGACGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS TCA 90 bp GGGGCAGCCCGGCCACCGGAGGTTGCACTCTTACCAGCACATAATTaGGGATTTCCTCGCAGGTCTTTACCACATTCACATTTAGGTATT +
Preference number: 5 (lower is better)
Translates to: GAARPPEVALLPAHN*GFPRRSLPHSHLGI
Trigger: AATACCTAAATGTGAATGTGGTAAAGACCTGCGAGGAAATCCTCAATTATGTGCTGGTAAGAGTGCAACCTCCGGTGGCCGGGCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS TCA 72 bp AACTGGCGCCGCCGGTGTCGGCGGGGAAGTGGCCTCTaGAGAGACGGGAGCCTCTTCTCTGTACTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: NWRRRCRRGSGL*RDGSLFSVLGG
Trigger: CCCACCCAGTACAGAGAAGAGGCTCCCGTCTCTTCAGAGGCCACTTCCCCGCCGACACCGGCGGCGCCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp CCTCTGAAGAGACGGGAGCCTCTTCTCTGTACTGGGTaGGGCAGGCAGCCGCAGCTCCTGAGGTGGGGTCAC +
Preference number: 6 (lower is better)
Translates to: PLKRREPLLCTG*GRQPQLLRWGH
Trigger: GTGACCCCACCTCAGGAGCTGCGGCTGCCTGCCCCACCCAGTACAGAGAAGAGGCTCCCGTCTCTTCAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp GCATCTCCATGGGCACTTCAGGAAGTTCAGGCAGCATaGGCAGTGCAGGGGGCTCGGGCTGCCCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: ASPWALQEVQAA*AVQGARAAPPQ
Trigger: CTGAGGAGGGGCAGCCCGAGCCCCCTGCACTGCCCATGCTGCCTGAACTTCCTGAAGTGCCCATGGAGATGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 72 bp GGCTCTGCCTCCTGTAAGGTGATGACCTCAGGGGACTaGACGGTGGCCAAGGTCCTGTCAGGCTTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: GSASCKVMTSGD*TVAKVLSGFLG
Trigger: CCCCAGGAAGCCTGACAGGACCTTGGCCACCGTGCAGTCCCCTGAGGTCATCACCTTACAGGAGGCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp TCACCAAACGGCTGCCTCGGGTTGCTGCCAGCCAGATaGTGGCGAAGCAGCCTGTGTGGCGCTGAAGCACGT +
Preference number: 6 (lower is better)
Translates to: SPNGCLGLLPAR*WRSSLCGAEAR
Trigger: ACGTGCTTCAGCGCCACACAGGCTGCTTCGCCACCATCTGGCTGGCAGCAACCCGAGGCAGCCGTTTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp GGGACTGCACGGTGGCCAAGGTCCTGTCAGGCTTCCTaGGGTCTGGAGTGGCTTCAGGAAGGGTCTCCTTAC +
Preference number: 6 (lower is better)
Translates to: GTARWPRSCQAS*GLEWLQEGSPY
Trigger: GTAAGGAGACCCTTCCTGAAGCCACTCCAGACCCCAGGAAGCCTGACAGGACCTTGGCCACCGTGCAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp CCAGCCAGAGAGAGTTGGGGTTCTGAAGAGCTCCGCTaGGCTTGTGAGCATCCTCTTGGGAGGCTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: PARESWGSEELR*ACEHPLGRLGH
Trigger: GTGGCCCAGCCTCCCAAGAGGATGCTCACAAGCCCAGCGGAGCTCTTCAGAACCCCAACTCTCTCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp TGGGCTTGTGAGCATCCTCTTGGGAGGCTGGGCCACTaGATACTCCCAGCAGTGAGCCCCAGTCTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: WACEHPLGRLGH*ILPAVSPSLQL
Trigger: CAACTGCAGACTGGGGCTCACTGCTGGGAGTATCCAGTGGCCCAGCCTCCCAAGAGGATGCTCACAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp AGCTCTGAAGACAGCATGAGGGGACCACTGGGCTCCTaGGCCTCCCTCAGAACCTCGATCTCGCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SSEDSMRGPLGS*ASLRTSISLRA
Trigger: AGCTCTGAGCGAGATCGAGGTTCTGAGGGAGGCCCAGGAGCCCAGTGGTCCCCTCATGCTGTCTTCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 72 bp ACCTGGCCTGGTAGTGCTTCTTGTATCCCTTCCACCTaGGCAGGAGCTGGAGGTGAGAGTGCCGAGACCAAA +
Preference number: 6 (lower is better)
Translates to: TWPGSASCIPST*AGAGGESAETK
Trigger: TTTGGTCTCGGCACTCTCACCTCCAGCTCCTGCGCAGGTGGAAGGGATACAAGAAGCACTACCAGGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp CACGGTGGCCAAGGTCCTGTCAGGCTTCCTGGGGTCTaGAGTGGCTTCAGGAAGGGTCTCCTTACGAGTTTT +
Preference number: 6 (lower is better)
Translates to: HGGQGPVRLPGV*SGFRKGLLTSF
Trigger: AAAACTCGTAAGGAGACCCTTCCTGAAGCCACTCCAGACCCCAGGAAGCCTGACAGGACCTTGGCCACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp CCAAACCAGCACCTTCTAGGGCCCGGGGTTCTTCCCTaGATTCATCCAGTGGTAGTGAAGCTCTCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: PNQHLLGPGVLP*IHPVVVKLSAV
Trigger: GACAGCGGAGAGCTTCACTACCACTGGATGAATCCAGGGAAGAACCCCGGGCCCTAGAAGGTGCTGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CAA 72 bp TTAGGTATTCACGCTTCACCAAACGGCTGCCTCGGGTaGCTGCCAGCCAGATGGTGGCGAAGCAGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: LGIHASPNGCLG*LPARWWRSSLC
Trigger: ACACAGGCTGCTTCGCCACCATCTGGCTGGCAGCAACCCGAGGCAGCCGTTTGGTGAAGCGTGAATACCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CAA 90 bp GTCTGCAGTTGTTCCTCAAACTTCTCCCGAGAGATCTGGGTCTCCTaGTCCCAGAATAATAACTGGCGCCGCCGGTGTCGGCGGGGAAGT +
Preference number: 6 (lower is better)
Translates to: VCSCSSNFSREIWVS*SQNNNWRRRCRRGS
Trigger: ACTTCCCCGCCGACACCGGCGGCGCCAGTTATTATTCTGGGACAAGGAGACCCAGATCTCTCGGGAGAAGTTTGAGGAACAACTGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 72 bp CATTCACATTTAGGTATTCACGCTTCACCAAACGGCTaGCTCGGGTTGCTGCCAGCCAGATGGTGGCGAAGC +
Preference number: 6 (lower is better)
Translates to: HSHLGIHASPNG*LGLLPARWWRS
Trigger: GCTTCGCCACCATCTGGCTGGCAGCAACCCGAGGCAGCCGTTTGGTGAAGCGTGAATACCTAAATGTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp CAGCCTGTCATCTTCTGTACCTCAGGAGGGAAGACCTaGCCTGGTAGTGCTTCTTGTATCCCTTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: QPVIFCTSGGKT*PGSASCIPSTC
Trigger: GCAGGTGGAAGGGATACAAGAAGCACTACCAGGCCAGGTCTTCCCTCCTGAGGTACAGAAGATGACAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CAA 90 bp AAGGGTTCTGGGGCATCTTCCAGCGTCTCCATCATGGCCAGGCAGTaGGGAAGAAGCAAGCTAGGTAGGTCAGCCTCCTCCATATCAATG +
Preference number: 6 (lower is better)
Translates to: KGSGASSSVSIMARQ*GRSKLGRSASSISM
Trigger: CATTGATATGGAGGAGGCTGACCTACCTAGCTTGCTTCTTCCCAACTGCCTGGCCATGATGGAGACGCTGGAAGATGCCCCAGAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp AGCTGTGGCCTTTGTCTGAGCATTCTTTGGGGGACCTaGGCACAGTGTGTCCATAAACCTAGGAGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: SCGLCLSILWGT*AQCVHKPRSSG
Trigger: CCCAGAACTCCTAGGTTTATGGACACACTGTGCCCAGGTCCCCCAAAGAATGCTCAGACAAAGGCCACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp TCAGTCTCCAGCTGTGGCCTTTGTCTGAGCATTCTTTaGGGGACCTGGGCACAGTGTGTCCATAAACCTAGG +
Preference number: 6 (lower is better)
Translates to: SVSSCGLCLSIL*GTWAQCVHKPR
Trigger: CCTAGGTTTATGGACACACTGTGCCCAGGTCCCCCAAAGAATGCTCAGACAAAGGCCACAGCTGGAGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 72 bp AGTTCTAAGTCTCCTCGACTGATCTCTGGGAGATCCTaGTCTCCTTCAATCTGCAGCATGCGGATGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSKSPRLISGRS*SPSICSMRMGS
Trigger: AGAGCCCATCCGCATGCTGCAGATTGAAGGAGAGCAGGATCTCCCAGAGATCAGTCGAGGAGACTTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp GTCTGCAGTTGTTCCTCAAACTTCTCCCGAGAGATCTaGGTCTCCTTGTCCCAGAATAATAACTGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: VCSCSSNFSREI*VSLSQNNNWRR
Trigger: GCGGCGCCAGTTATTATTCTGGGACAAGGAGACCCAGATCTCTCGGGAGAAGTTTGAGGAACAACTGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CAA 90 bp GAATTTGGGTCCAGGACGAATCAGGAGGGGCCCATATGGCTTCTGTaGTTCCACAAGAAGGATCTTCTGTGTGGACAGCACCAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: EFGSRTNQEGPIWLL*FHKKDLLCGQHQEQ
Trigger: CTGCTCTTGGTGCTGTCCACACAGAAGATCCTTCTTGTGGAACAACAGAAGCCATATGGGCCCCTCCTGATTCGTCCTGGACCCAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CAA 90 bp GTGCTCCAGGATATGCTGGATGTCTTCCACAAGGTACTGGCACTGTaGAAAGTAGACCCTTATCACACCAATCTGAAGCTGGGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: VLQDMLDVFHKVLAL*KVDPYHTNLKLGGE
Trigger: CTCTCCGCCCAGCTTCAGATTGGTGTGATAAGGGTCTACTTTCAACAGTGCCAGTACCTTGTGGAAGACATCCAGCATATCCTGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS GCA 72 bp ATATCAATGCGAATCCGCAGCTGGGCACGATGTAGGTaGTCCAGGATATGCTGGATGTCTTCCACAAGGTAC +
Preference number: 6 (lower is better)
Translates to: ISMRIRSWARCR*SRICWMSSTRY
Trigger: GTACCTTGTGGAAGACATCCAGCATATCCTGGAGCACCTACATCGTGCCCAGCTGCGGATTCGCATTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp GGAGAAGCCTGCCTCTCTGACGTTCCTCTAGCAAGATaGCGTCATCTTTCTCTGCGATCAGCAGTTCTAAGT +
Preference number: 6 (lower is better)
Translates to: GEACLSDVPLAR*RHLSLRSAVLS
Trigger: ACTTAGAACTGCTGATCGCAGAGAAAGATGACGCCATCTTGCTAGAGGAACGTCAGAGAGGCAGGCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS TCA 72 bp CGGCCACCGGAGGTTGCACTCTTACCAGCACATAATTaGGGATTTCCTCGCAGGTCTTTACCACATTCACAT +
Preference number: 6 (lower is better)
Translates to: RPPEVALLPAHN*GFPRRSLPHSH
Trigger: ATGTGAATGTGGTAAAGACCTGCGAGGAAATCCTCAATTATGTGCTGGTAAGAGTGCAACCTCCGGTGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS TCA 72 bp CTTTCTCTGCGATCAGCAGTTCTAAGTCTCCTCGACTaGTCTCTGGGAGATCCTGCTCTCCTTCAATCTGCA +
Preference number: 6 (lower is better)
Translates to: LSLRSAVLSLLD*SLGDPALLQSA
Trigger: TGCAGATTGAAGGAGAGCAGGATCTCCCAGAGATCAGTCGAGGAGACTTAGAACTGCTGATCGCAGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CCA 72 bp ATGGCTTCTGTTGTTCCACAAGAAGGATCTTCTGTGTaGACAGCACCAAGAGCAGATAGAAGACCCGAGAAG +
Preference number: 6 (lower is better)
Translates to: MASVVPQEGSSV*TAPRADRRPEK
Trigger: CTTCTCGGGTCTTCTATCTGCTCTTGGTGCTGTCCACACAGAAGATCCTTCTTGTGGAACAACAGAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8
CDS CAA 72 bp GATATGCTGGATGTCTTCCACAAGGTACTGGCACTGTaGAAAGTAGACCCTTATCACACCAATCTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: DMLDVFHKVLAL*KVDPYHTNLKL
Trigger: CAGCTTCAGATTGGTGTGATAAGGGTCTACTTTCAACAGTGCCAGTACCTTGTGGAAGACATCCAGCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002395.8