Pregenerated sensors for RDH16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069456Ensembl transcript IDs: ENSMUST00000071646.2, ENSMUST00000125163.2, ENSMUST00000155739.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGCATCAAAACCCATTGCAGGTGGTTGTGAGCCACCACGTGGTTaGTGGGATTTGAACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: RASKPIAGGCEPPRG*WDLNSGALEEQSVP Trigger: GGGCACTGACTGCTCTTCCAGAGCTCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGGTTTTGATGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR GCA 90 bp | CTAGCCAGGGCATGTACATTTCCTGCAGAGGAGGACACAGGAGAGTaGTTGGCACAAACTTGTCCCAGCCTCCTCATCTGTGTGGACCTT | + |
|
Preference number: 1 (lower is better) Translates to: LARACTFPAEEDTGE*LAQTCPSLLICVDL Trigger: AAGGTCCACACAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCACTCTCCTGTGTCCTCCTCTGCAGGAAATGTACATGCCCTGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 90 bp | GTTTCACCACCAGGAACTGAACCTTCCACCCAGAGCCTGGCAACCTaGCACCAGGGAATGGGTGCTGGCATTATTAGTAACTCCCTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: VSPPGTEPSTQSLAT*HQGMGAGIISNSLR Trigger: TCTGAGGGAGTTACTAATAATGCCAGCACCCATTCCCTGGTGTCAGGTTGCCAGGCTCTGGGTGGAAGGTTCAGTTCCTGGTGGTGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 90 bp | AAAAATTGGTGTCTCCGTACTCTGCTAGGTTTCACCACCAGGAACTaGACCTTCCACCCAGAGCCTGGCAACCTGACACCAGGGAATGGG | + |
|
Preference number: 1 (lower is better) Translates to: KNWCLRTLLGFTTRN*TFHPEPGNLTPGNG Trigger: CCCATTCCCTGGTGTCAGGTTGCCAGGCTCTGGGTGGAAGGTTCAGTTCCTGGTGGTGAAACCTAGCAGAGTACGGAGACACCAATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 90 bp | CTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTGTaGGCCACCACGTGGTTGCTGGGATTTGAACTCAGGAGCTCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: LQTPEEGIKTHCRWL*ATTWLLGFELRSSG Trigger: TCCAGAGCTCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR GCA 90 bp | AGGGACACTTCCATGCTGCATAAGGGCTTAACTAGCCAGGGCAAGTaGATTTCCTGCAGAGGAGGACACAGGGCACTGTTTGGAACAAGC | + |
|
Preference number: 1 (lower is better) Translates to: RDTSMLHKGLTSQGK*ISCRGGHRALFGTS Trigger: GCTTGTTCCAAACAGTGCCCTGTGTCCTCCTCTGCAGGAAATGCACTTGCCCTGGCTAGTTAAGCCCTTATGCAGCATGGAAGTGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | GCATCAAAACCCATTGCAGGTGGTTGTGAGCCACCACGTGGTTGCTaGGATTTGAACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ASKPIAGGCEPPRGC*DLNSGALEEQSVPL Trigger: TAAGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGGTTTTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 90 bp | CAGGCTTCAGGGAAATCCAGTAGAGAACAGCATCCACAAGAAAGGTaGGCAGGTAGCTCAAGGGGAGGAAGAAGAACTTGGCATCCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: QASGKSSREQHPQER*AGSSRGGRRTWHPS Trigger: GCTGGGATGCCAAGTTCTTCTTCCTCCCCTTGAGCTACCTGCCCACCTTTCTTGTGGATGCTGTTCTCTACTGGATTTCCCTGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | TCTGCAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGGGAAGGCATaGTCACTTAGTGAGTCTGCAGAAAAGGGATGGGCGCCTAGTCTA | + |
|
Preference number: 1 (lower is better) Translates to: SAGKAWSLSESAGKA*SLSESAEKGWAPSL Trigger: TAGACTAGGCGCCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | TCTGCAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGGGAAGGCATaGTCACTTAGTGAGTCTGCAGGGAAGGCATGGTCACTTAGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SAGKAWSLSESAGKA*SLSESAGKAWSLSE Trigger: CTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 90 bp | GAAGAAGAGTCAGGCATCTATGAAAGTCCCACCAAAGCACAAGTCTaGACTGAGCCCAGGATTCTCTGCCTCTTCCACACATGCTGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: EEESGIYESPTKAQV*TEPRILCLFHTCCP Trigger: GGGACAGCATGTGTGGAAGAGGCAGAGAATCCTGGGCTCAGTGCAGACTTGTGCTTTGGTGGGACTTTCATAGATGCCTGACTCTTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | TCTGCTAGGTTTCACCACCAGGAACTGAACCTTCCACCCAGAGCCTaGCAACCTGACACCAGGGAATGGGTGCTGGCATTATTAGTAACT | + |
|
Preference number: 1 (lower is better) Translates to: SARFHHQELNLPPRA*QPDTREWVLALLVT Trigger: AGTTACTAATAATGCCAGCACCCATTCCCTGGTGTCAGGTTGCCAGGCTCTGGGTGGAAGGTTCAGTTCCTGGTGGTGAAACCTAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 90 bp | CCAGGGCAAGTGCATTTCCTGCAGAGGAGGACACAGGGCACTGTTTaGAACAAGCTGGTCCTAACCTCCTCATCTGTGTGGATCTTCATT | + |
|
Preference number: 1 (lower is better) Translates to: PGQVHFLQRRTQGTV*NKLVLTSSSVWIFI Trigger: AATGAAGATCCACACAGATGAGGAGGTTAGGACCAGCTTGTTCCAAACAGTGCCCTGTGTCCTCCTCTGCAGGAAATGCACTTGCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 90 bp | CCTACTTCAGTGTCTGCAAGGGCTGAGACAAAGCAAGAAGAAGCCTaGTGTCCTGTAGAAACCCTTCTCAGGACATTTCCCCTTACCCCT | + |
|
Preference number: 1 (lower is better) Translates to: PTSVSARAETKQEEA*CPVETLLRTFPLTP Trigger: AGGGGTAAGGGGAAATGTCCTGAGAAGGGTTTCTACAGGACAGCAGGCTTCTTCTTGCTTTGTCTCAGCCCTTGCAGACACTGAAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | TCTGCAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGATaGGCGCCTAGTCTACAGGGAATTGATGATCACCCAGTGAGTCTA | + |
|
Preference number: 1 (lower is better) Translates to: SAGKAWSLSESAEKG*APSLQGIDDHPVSL Trigger: TAGACTCACTGGGTGATCATCAATTCCCTGTAGACTAGGCGCCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 90 bp | AACCATCACGATGCTCCAGAGTATACTGAGAAAGGTCCAGCCTCCTaGCCTTCTCACAGGGCACAACATGCAGAGATGCTGTTGATGTAC | + |
|
Preference number: 1 (lower is better) Translates to: NHHDAPEYTEKGPAS*PSHRAQHAEMLLMY Trigger: GTACATCAACAGCATCTCTGCATGTTGTGCCCTGTGAGAAGGTCAGGAGGCTGGACCTTTCTCAGTATACTCTGGAGCATCGTGATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR TCA 90 bp | GGTTCCAGGAGGTCTCTCCCTTTTGAGGTCAATCGCCTCAGTCTATaGAACTTGTCACATAGATCCTACTGGAGGTGGTGTGGCAGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: GSRRSLPFEVNRLSL*NLSHRSYWRWCGRN Trigger: ATTTCTGCCACACCACCTCCAGTAGGATCTATGTGACAAGTTTCATAGACTGAGGCGATTGACCTCAAAAGGGAGAGACCTCCTGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | TCTAAAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGATaGATGCCTAGTCTACAGGGAGTTGATGATCACCCAGTGAGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: SKGKAWSLSESAEKG*MPSLQGVDDHPVSL Trigger: CAGACTCACTGGGTGATCATCAACTCCCTGTAGACTAGGCATCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | TGCCAGGTATTTCTCGCCATAGATCTCCCTGATTTCTCCCTGGTCTaGTCCCACAGCACCTGGATGTTTGATGATAATCTTTCACTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: CQVFLAIDLPDFSLV*SHSTWMFDDNLSLS Trigger: TGAGAGTGAAAGATTATCATCAAACATCCAGGTGCTGTGGGACCAGACCAGGGAGAAATCAGGGAGATCTATGGCGAGAAATACCTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | GAGAAAGGAGTGGTGAAGCCGAGGCCTACAAGTAAATTCCGTTCATaGACCTGCATGCACAGAATTCTGCACTATTTGCTGGTGTTAAGT | + |
|
Preference number: 1 (lower is better) Translates to: EKGVVKPRPTSKFRS*TCMHRILHYLLVLS Trigger: ACTTAACACCAGCAAATAGTGCAGAATTCTGTGCATGCAGGTCCATGAACGGAATTTACTTGTAGGCCTCGGCTTCACCACTCCTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 90 bp | CCTCATCTGTGTGGATCTTCATTGAAGGCCATAATGCTCAGAGCCTaGGCATCAGTCAGTGCTTTTGTATCTGAATCCCTTGGCAGAATT | + |
|
Preference number: 1 (lower is better) Translates to: PHLCGSSLKAIMLRA*ASVSAFVSESLGRI Trigger: AATTCTGCCAAGGGATTCAGATACAAAAGCACTGACTGATGCTCAGGCTCTGAGCATTATGGCCTTCAATGAAGATCCACACAGATGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 90 bp | GCATCAGCCAGCTCTTTTGTAACTGAATCCCTTGGCAGAATTCTTTaGCTATTTCTTTGGTCATCATCAGTCTTGAGTAGTGTCATAGGA | + |
|
Preference number: 1 (lower is better) Translates to: ASASSFVTESLGRIL*LFLWSSSVLSSVIG Trigger: TCCTATGACACTACTCAAGACTGATGATGACCAAAGAAATAGGCAAAGAATTCTGCCAAGGGATTCAGTTACAAAAGAGCTGGCTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 90 bp | TGCATGCACAGAATTCTGCACTATTTGCTGGTGTTAAGTTTTGAATaGAAAGTTGTTGTTCCTACTTCAGTGTCTGCAAGGGCTGAGACA | + |
|
Preference number: 1 (lower is better) Translates to: CMHRILHYLLVLSFE*KVVVPTSVSARAET Trigger: TGTCTCAGCCCTTGCAGACACTGAAGTAGGAACAACAACTTTCCATTCAAAACTTAACACCAGCAAATAGTGCAGAATTCTGTGCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 90 bp | TGGTCATCATCAGTCTCAAGTAGTATCATAGGAGAATTAATGAGATaGAGTGTGTTGACTAAGAACCCCAGAGTAAAACACTCCCTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: WSSSVSSSIIGELMR*SVLTKNPRVKHSLH Trigger: ATGGAGGGAGTGTTTTACTCTGGGGTTCTTAGTCAACACACTTCATCTCATTAATTCTCCTATGATACTACTTGAGACTGATGATGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 90 bp | GAAGACAGTAAGGCTAGAGCTTACAAGGTCATGGTAAACCTGCCATaGAGTGAGACATCTCAAAATAAAATGAAACAAGATGCAGTATCA | + |
|
Preference number: 1 (lower is better) Translates to: EDSKARAYKVMVNLP*SETSQNKMKQDAVS Trigger: TGATACTGCATCTTGTTTCATTTTATTTTGAGATGTCTCACTGCATGGCAGGTTTACCATGACCTTGTAAGCTCTAGCCTTACTGTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR GCA 90 bp | GCATCAGTCAGTGCTTTTGTATCTGAATCCCTTGGCAGAATTCTTTaGCTATTTCATTGGTCATCATCAGTCTCAAGTAGTATCATAGGA | + |
|
Preference number: 1 (lower is better) Translates to: ASVSAFVSESLGRIL*LFHWSSSVSSSIIG Trigger: TCCTATGATACTACTTGAGACTGATGATGACCAATGAAATAGGCAAAGAATTCTGCCAAGGGATTCAGATACAAAAGCACTGACTGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | GGAAAAAGACTTGTGAAACTGAGGCCTACAGGTAAATTCTGTCCATaGACTTGCATGCACAGTCTTCTGCCTTATGTGTTATTATTAAGT | + |
|
Preference number: 1 (lower is better) Translates to: GKRLVKLRPTGKFCP*TCMHSLLPYVLLLS Trigger: ACTTAATAATAACACATAAGGCAGAAGACTGTGCATGCAAGTCCATGGACAGAATTTACCTGTAGGCCTCAGTTTCACAAGTCTTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR GCA 90 bp | AGACTTGTGAAACTGAGGCCTACAGGTAAATTCTGTCCATGGACTTaGATGCACAGTCTTCTGCCTTATGTGTTATTATTAAGTTTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: RLVKLRPTGKFCPWT*MHSLLPYVLLLSFE Trigger: TTCAAAACTTAATAATAACACATAAGGCAGAAGACTGTGCATGCAAGTCCATGGACAGAATTTACCTGTAGGCCTCAGTTTCACAAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 90 bp | GTTGCCTGGGACAAAGATAGATGGAAAATCAGAAGGGCTTTGTTGTaGTGGTCAGTAAGTGATTCTTATATGAAGAAATGGTCATTTAGT | + |
|
Preference number: 1 (lower is better) Translates to: VAWDKDRWKIRRALL*WSVSDSYMKKWSFS Trigger: ACTAAATGACCATTTCTTCATATAAGAATCACTTACTGACCATCACAACAAAGCCCTTCTGATTTTCCATCTATCTTTGTCCCAGGCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 90 bp | AATGTCCAATATGAAAGACTAGTGTTGAGAAGGATACTCTCTACATaGTCACATAGTGATTCTACAGGAAAAAGACTTGTGAAACTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: NVQYERLVLRRILST*SHSDSTGKRLVKLR Trigger: CCTCAGTTTCACAAGTCTTTTTCCTGTAGAATCACTATGTGACCATGTAGAGAGTATCCTTCTCAACACTAGTCTTTCATATTGGACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCCCTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACAAGCATCCCAGCCAGCTaGGTATCGGGTACGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TPSQGKSVLSPGFSVSSTSIPAS*VSGTRV Trigger: CACCCTCGTACCCGATACTCAGCTGGCTGGGATGCT...TGTGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCAGAAAAGGGATGGATGCCTAGTCTACAGGGAGTTGATGATCACCCAGTGCTCACCACCAGAGACTaGACCTCCCACCCAGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SAEKGWMPSLQGVDDHPVLTTRD*TSHPGP Trigger: AGGCCCTGGGTGGGAGGTTCAGTCTCTGGTGGTGAG...CACTGGGTGATCATCAACTCCCTGTAGACTAGGCATCCATCCCTTTTCTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACCCCAGTCTGGTATGGGGGTCCCTGGAATGAGGGTCCTTGAAGCTAAGTGGAGTGTCTGCAAGGGCTaGGACAAAGCAAGAAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPQSGMGVPGMRVLEAKWSVCKG*DKARRS Trigger: GCTTCTTCTTGCTTTGTCTCAGCCCTTGCAGACACT...CCACTTAGCTTCAAGGACCCTCATTCCAGGGACCCCCATACCAGACTGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGATGGGCGCCTAGTCTAGGCAAGTGCATTTCCTaGAGAGGAGGACACAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GKAWSLSESAEKGWAPSLGKCIS*RGGHRA Trigger: TGCCCTGTGTCCTCCTCTGCAGGAAATGCACTTGCC...TAGACTAGGCGCCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CAA 90 bp | GCCAGGGCAAGTGCATTTCCTGCAGAGGAGGACACAGGGCACTGTTaGGAACAAGCTGGTCCTAACCTCCTCATCTGTGTGGATCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ARASAFPAEEDTGHC*EQAGPNLLICVDLH Trigger: ATGAAGATCCACACAGATGAGGAGGTTAGGACCAGCTTGTTCCAAACAGTGCCCTGTGTCCTCCTCTGCAGGAAATGCACTTGCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCTTAACTGCTGAGCCATCTCTGGAGGACACAGGAGAGTaGTTGGCACAAACTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NSGALEEQSVPLTAEPSLEDTGE*LAQTCP Trigger: GGGACAAGTTTGTGCCAAGCACTCTCCTGTGTCCTC...CAGAGATGGCTCAGCAGTTAAGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACCCCTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACAGTCAAAGAAAGCCTaGTGGCCTGTGCCAATCCTT | + |
|
Preference number: 2 (lower is better) Translates to: EPLPRASLYLAQDSLSLPQSKKA*WPVPIL Trigger: AAGGATTGGCACAGGCCAGCAGGCTTTCTTTGACTG...TGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAGGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCCCTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACAAGCTCTCAGAGGCCATaGGAAGTTCAAGACCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: TPSQGKSVLSPGFSVSSTSSQRP*EVQDPY Trigger: ATAAGGGTCTTGAACTTCTCATGGCCTCTGAGAGCT...TGTGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCGCTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTGAGCCACCACGTGGTTaGTGGGATTTGAACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QSLSSDTRRGHQNPLQVVEPPRG*WDLNSG Trigger: TCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTC...AACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAGCGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTCGCTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTGGTAGCTGGAAGGGATaGGACAGTCAAAGAAAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QSLSSDTRRGHQNPLQVVGSWKG*DSQRKP Trigger: AGGCTTTCTTTGACTGTCTCATCCCTTCCAGCTACC...AACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAGCGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCTTAACTGCTGAGCCATCTCTGCAGCTCTTTTGTAACTaGATCCCTTGGCAGAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSGALEEQSVPLTAEPSLQLFCN*IPWQNS Trigger: AGAATTCTGCCAAGGGATTCAGTTACAAAAGAGCTG...CAGAGATGGCTCAGCAGTTAAGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCTTAACTGCTGAGCCATCTCTGTACCTTGGACAGAGGTaGTTTCAGAACAGGGATAAT | + |
|
Preference number: 2 (lower is better) Translates to: NSGALEEQSVPLTAEPSLYLGQR*FQNRDN Trigger: ATTATCCCTGTTCTGAAATCACCTCTGTCCAAGGTA...CAGAGATGGCTCAGCAGTTAAGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTGGCACAAACTTGTCCCAGCCTCCTCATCTGTGTGGACCTTCATGGTAGCTCAGACCTAGTACCTTaGACAGAGGTGATTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CLAQTCPSLLICVDLHGSSDLVP*TEVISE Trigger: TTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGA...GCTACCATGAAGGTCCACACAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCCTGAGAAGAGTTCCACAACCGGTTCCAGGAGGTCTCTCCCTTTTGAGGTGGTCCCACAGCATCTaGGTATTTGAGCATAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLLRRVPQPVPGGLSLLRWSHSI*VFEHNL Trigger: CAGATTATGCTCAAATACCCAGATGCTGTGGGACCA...CCTCAAAAGGGAGAGACCTCCTGGAACCGGTTGTGGAACTCTTCTCAGGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTGTTGCACCTCTGGTTCATTTTGTTTAGGCATTTCAGACAGGATGCCAGGGATTTCTCCCTGGTCTaGTCCCACAGCACCTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: FVLHLWFILFRHFRQDARDFSLV*SHSTWM Trigger: CATCCAGGTGCTGTGGGACCAGACCAGGGAGAAATC...CCTGGCATCCTGTCTGAAATGCCTAAACAAAATGAACCAGAGGTGCAACACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CCA 90 bp | CATAAAATGAAAAACAGAGTTGAGAGGGACACTCTCGGCATGGTGCTGGAGGAGACACAGGGCACTGTTTaGAACAAGCTGGTCCTAACC | + |
|
Preference number: 2 (lower is better) Translates to: HKMKNRVERDTLGMVLEETQGTV*NKLVLT Trigger: GGTTAGGACCAGCTTGTTCCAAACAGTGCCCTGTGT...CTCCTCCAGCACCATGCCGAGAGTGTCCCTCTCAACTCTGTTTTTCATTTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAAGGATAAAGCCATACTTCAAAACGCAGAGCAACAGAGATCACCTCATATTCAGAGCCTGGCAACCTaGCACCAGGGAATGGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LKDKAILQNAEQQRSPHIQSLAT*HQGMGA Trigger: AGCACCCATTCCCTGGTGTCAGGTTGCCAGGCTCTG...AATATGAGGTGATCTCTGTTGCTCTGCGTTTTGAAGTATGGCTTTATCCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGATGGGCGCCTAGTCTAGCTGGTGTTAAGTTTTaGATGGAAAGTTGTTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GKAWSLSESAEKGWAPSLAGVKF*MESCCS Trigger: GGAACAACAACTTTCCATTCAAAACTTAACACCAGC...TAGACTAGGCGCCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCTGCACTGAGCCCAGGATTCTCTGCCTCTTCCACACATGCTGTCCCTGCTTCTGCAGTAAATATATaGTCACTTTGTGAGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KSALSPGFSASSTHAVPASAVNI*SLCESA Trigger: TGCAGACTCACAAAGTGATCATATATTTACTGCAGA...AGCAGGGACAGCATGTGTGGAAGAGGCAGAGAATCCTGGGCTCAGTGCAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTCCTGAGAAGAGTTCCACAACCGGTTCCAGGAGGTCTCTCCCTTTTGAGGTACAAGTTTCTCCTGTaGCTTCTCAGTCTCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: FLLRRVPQPVPGGLSLLRYKFLL*LLSLHV Trigger: AACATGGAGACTGAGAAGTCACAGGAGAAACTTGTA...CCTCAAAAGGGAGAGACCTCCTGGAACCGGTTGTGGAACTCTTCTCAGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCACAGCCTACTCTTAAACCTCACCAACCTAGCAGCAGGCAGAGCCAGCTCTTATTAAGTTTTGAATaGAGAGCAGTTGTTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: TAQPTLKPHQPSSRQSQLLLSFE*RAVVPT Trigger: GGTGGGAACAACTGCTCTCCATTCAAAACTTAATAA...GAGCTGGCTCTGCCTGCTGCTAGGTTGGTGAGGTTTAAGAGTAGGCTGTGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACACATGATTTCAAGCTCTCAGAGGCCATaGGAAGTTCAAGACCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: RASLYLAQDSLSLPHMISSSQRP*EVQDPY Trigger: ATAAGGGTCTTGAACTTCTCATGGCCTCTGAGAGCT...TGAAATCATGTGTGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTGAGTCTGCAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGACAGTGCTTTTGTATCTaGATCCCTTGGCAGAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSESAGKAWSLSESAEKGQCFCI*IPWQNS Trigger: AGAATTCTGCCAAGGGATTCAGATACAAAAGCACTG...TCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTGGCACAAACTTGTCCCAGCCTCCTCATCTGTGTGGACCTTCATGGTAGCCTTTGCCTATTTCTTTaGTCATCATCAGTCTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLAQTCPSLLICVDLHGSLCLFL*SSSVLS Trigger: ACTCAAGACTGATGATGACCAAAGAAATAGGCAAAG...GCTACCATGAAGGTCCACACAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCGCTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTGGTAAATTCTGTCCATaGACTTGCATGCACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: QSLSSDTRRGHQNPLQVVGKFCP*TCMHSL Trigger: AAGACTGTGCATGCAAGTCCATGGACAGAATTTACC...AACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAGCGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTAGTGGCCCCATTTCTAGGGATGCTTTCTTACCCATTATTCTCACTTAAGTCCCTGATTTCTCCCTaGTCTGGTCCCACAGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: MLVAPFLGMLSYPLFSLKSLISP*SGPTAP Trigger: AGGTGCTGTGGGACCAGACCAGGGAGAAATCAGGGA...CTTAAGTGAGAATAATGGGTAAGAAAGCATCCCTAGAAATGGGGCCACTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCCTGAGAAGAGTTCCACAACCGGTTCCAGGAGGTCTCTCCCTTTTGAGGAGTAAATTCCGTTCATaGACCTGCATGCACAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: FLLRRVPQPVPGGLSLLRSKFRS*TCMHRI Trigger: AATTCTGTGCATGCAGGTCCATGAACGGAATTTACT...CCTCAAAAGGGAGAGACCTCCTGGAACCGGTTGTGGAACTCTTCTCAGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAGCTCTCAAGCAGGGGATTTTATACCTTAAGAAGCCAAACATTACATCTCCAGAGAAAGGAGTGGTaGAGCCGAGGCCTACAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LQLSSRGFYTLRSQTLHLQRKEW*SRGLQV Trigger: TACTTGTAGGCCTCGGCTTCACCACTCCTTTCTCTG...GAGATGTAATGTTTGGCTTCTTAAGGTATAAAATCCCCTGCTTGAGAGCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCCTTATGTGTTATTATTAAGTTTTGAATGGAGAGCAGTTGTTCCCACCTCGGAGGACACAGGAGAGTaGTTGGCACAAACTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LPYVLLLSFEWRAVVPTSEDTGE*LAQTCP Trigger: GGGACAAGTTTGTGCCAAGCACTCTCCTGTGTCCTC...CGAGGTGGGAACAACTGCTCTCCATTCAAAACTTAATAATAACACATAAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGAAATTATTGTATATTTACAAGTTTCTCCTGCGTCCCCTCTTCCCCCACAGGCATGTACATTTCCTaGAGAGGAGGACACAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRNYCIFTSFSCVPSSPTGMYIS*RGGHRR Trigger: TCTCCTGTGTCCTCCTCTGCAGGAAATGTACATGCC...TGTGGGGGAAGAGGGGACGCAGGAGAAACTTGTAAATATACAATAATTTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGTCAGTGCCCTTAACTGCTGAGCCATCTCTGCAGCCAGCTAAAAGTTTCCTTTGCCTATTTCTTTaGTCATCATCAGTCTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: EQSVPLTAEPSLQPAKSFLCLFL*SSSVLS Trigger: ACTCAAGACTGATGATGACCAAAGAAATAGGCAAAG...GAAACTTTTAGCTGGCTGCAGAGATGGCTCAGCAGTTAAGGGCACTGACTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCACATTTCTACTGAGAGAAGAGGAGTCAGGCATCTATGGGAACCCCTTCCCATACAAATGAAAAATTaGTGTCTCCGTACTCTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PHISTERRGVRHLWEPLPIQMKN*CLRTLL Trigger: TAGCAGAGTACGGAGACACCAATTTTTCATTTGTAT...GGGAAGGGGTTCCCATAGATGCCTGACTCCTCTTCTCTCAGTAGAAATGTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCTTAACTGCTGAGCCATCTCTGATACAAATGAAAAATTaGTGTCTCCGTACTCTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: NSGALEEQSVPLTAEPSLIQMKN*CLRTLL Trigger: TAGCAGAGTACGGAGACACCAATTTTTCATTTGTAT...CAGAGATGGCTCAGCAGTTAAGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAGCTCTCAAGCAGGGGATTTTATACCTTAAGAAGCCAAACATTACATCTCGGAGGAAGAAGAACTTaGCATCCCAGCCTACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LQLSSRGFYTLRSQTLHLGGRRT*HPSLLS Trigger: GCTCAGTAGGCTGGGATGCCAAGTTCTTCTTCCTCC...GAGATGTAATGTTTGGCTTCTTAAGGTATAAAATCCCCTGCTTGAGAGCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CAA 90 bp | GGAATGGGTGCTGGCATTATTAGTAACTCCCTCAGACCTAGTACCTaGGACAGAGGTGATTTCAGAACAGGGATAATTCCATCTTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: GMGAGIISNSLRPST*DRGDFRTGIIPSCI Trigger: TATGCAAGATGGAATTATCCCTGTTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGAGGGAGTTACTAATAATGCCAGCACCCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTAGCCCAGGATTCTCTGTCTCTTCCACACATGATTTCACTGCACAGCCTATACCTTGGACAGAGGTaGTTTCAGAACAGGGATAAT | + |
|
Preference number: 2 (lower is better) Translates to: YLAQDSLSLPHMISLHSLYLGQR*FQNRDN Trigger: ATTATCCCTGTTCTGAAATCACCTCTGTCCAAGGTA...TAGGCTGTGCAGTGAAATCATGTGTGGAAGAGACAGAGAATCCTGGGCTAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAGCCCAGGATTCTCTGTCTCTTCCACACATGATTTCACTGCACAGCCTATCAGACCTAGTACCTTaGACAGAGGTGATTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YLAQDSLSLPHMISLHSLSDLVP*TEVISE Trigger: TTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGA...TAGGCTGTGCAGTGAAATCATGTGTGGAAGAGACAGAGAATCCTGGGCTAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGATTCTCTGTCTCTTCCACACATGATTTCACTGCACAGCCTACTCTTAAACTGGTCCCACAGCATCTaGGTATTTGAGCATAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: QDSLSLPHMISLHSLLLNWSHSI*VFEHNL Trigger: CAGATTATGCTCAAATACCCAGATGCTGTGGGACCA...GTTTAAGAGTAGGCTGTGCAGTGAAATCATGTGTGGAAGAGACAGAGAATCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTAGTGGCCCCATTTCTAGGGATGCTTTCTTACCCATTATTCTCACTTAAGCCTAACTCCAGGGCATaGGTGCTGGCATTATTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: MLVAPFLGMLSYPLFSLKPNSRA*VLALLV Trigger: CACTAATAATGCCAGCACCCATGCCCTGGAGTTAGG...CTTAAGTGAGAATAATGGGTAAGAAAGCATCCCTAGAAATGGGGCCACTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CAA 90 bp | TGCTCAGAGCCTGAGCATCAGTCAGTGCTTTTGTATCTGAATCCCTaGGCAGAATTCTTTGCCTATTTCATTGGTCATCATCAGTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: CSEPEHQSVLLYLNP*AEFFAYFIGHHQSQ Trigger: TTGAGACTGATGATGACCAATGAAATAGGCAAAGAATTCTGCCAAGGGATTCAGATACAAAAGCACTGACTGATGCTCAGGCTCTGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCAATACAAATGAAAAATTGGTGTCTCCGTACTCTGCTAGGTTTCACCACCAGTTCTGTCCATGGACTTaGATGCACAGTCTTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FNTNEKLVSPYSARFHHQFCPWT*MHSLLP Trigger: AGGCAGAAGACTGTGCATGCAAGTCCATGGACAGAA...CTGGTGGTGAAACCTAGCAGAGTACGGAGACACCAATTTTTCATTTGTATTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTATTGTATTCTAATAGTTGAAGATCTCAGGTTGGAGGGATGGGTCTTGGTTGGAAAGGGGAAATGTTaGAGGCATCCTGGGATCACC | + |
|
Preference number: 2 (lower is better) Translates to: FYCILIVEDLRLEGWVLVGKGKC*RHPGIT Trigger: GGTGATCCCAGGATGCCTGCAACATTTCCCCTTTCC...AACCAAGACCCATCCCTCCAACCTGAGATCTTCAACTATTAGAATACAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAGTTCCTACATCTCCCCAGGTATGCACATAGGTGAAGACTTCAGAGGGCTTTTTGTGTTGCACCTCTaGTTCATTTTGTTTAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: YSSYISPGMHIGEDFRGLFVLHL*FILFRH Trigger: ATGCCTAAACAAAATGAACCAGAGGTGCAACACAAA...AAGCCCTCTGAAGTCTTCACCTATGTGCATACCTGGGGAGATGTAGGAACTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAAATTATTGTTTACTTTACAAGTTTCTCCTGTGACTTCTCAGTCTCCATGTTAGTGAGTCTGCAGTaGAGGGAAGGTCACTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AEIIVYFTSFSCDFSVSMLVSLQ*REGHLG Trigger: CCCTAAGTGACCTTCCCTTCACTGCAGACTCACTAA...CATGGAGACTGAGAAGTCACAGGAGAAACTTGTAAAGTAAACAATAATTTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGAGCATCAGTCAGTGCTTTTGTATCTGAATCCCTTGGCAGAATTCTTTGCCAATTCAGGTTTGTGTTaGACCTCTGGTTCATTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PEHQSVLLYLNPLAEFFANSGLC*TSGSFC Trigger: ACAAAATGAACCAGAGGTGCAACACAAACCTGAATT...GGCAAAGAATTCTGCCAAGGGATTCAGATACAAAAGCACTGACTGATGCTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCACAGAATTCTGCACTATTTGCTGGTGTTAAGTTTTGAATGGAAAGTTGTTACTAGCCAGGGCAAGTaGATTTCCTGCAGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: MHRILHYLLVLSFEWKVVTSQGK*ISCRGG Trigger: TCCTCCTCTGCAGGAAATGCACTTGCCCTGGCTAGT...AACAACTTTCCATTCAAAACTTAACACCAGCAAATAGTGCAGAATTCTGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGTTCCAAACTTCACTAAAGGATAAAGCCATACTTCAAAACGCAGAGCAACCTGACACCAGGGAATaGGTGCTGGCATTATTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SVFQTSLKDKAILQNAEQPDTRE*VLALLV Trigger: TACTAATAATGCCAGCACCCATTCCCTGGTGTCAGG...TTGCTCTGCGTTTTGAAGTATGGCTTTATCCTTTAGTGAAGTTTGGAACACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAGCTCTCAAGCAGGGGATTTTATACCTTAAGAAGCCAAACATTACATCTCTCTAAAGGGAAGGCATaGTCACTTAGTGAGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LQLSSRGFYTLRSQTLHLSKGKA*SLSESA Trigger: TGCAGACTCACTAAGTGACCATGCCTTCCCTTTAGA...GAGATGTAATGTTTGGCTTCTTAAGGTATAAAATCCCCTGCTTGAGAGCTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CAA 90 bp | GACAAACAGAAACAAACACAGAGGCAGTTTGAATCTGAGTGTGTTTaGCAGCTCTCAAGCAGGGGATTTTATACCTTAAGAAGCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: DKQKQTQRQFESECV*QLSSRGFYTLRSQT Trigger: TGTTTGGCTTCTTAAGGTATAAAATCCCCTGCTTGAGAGCTGCAAAACACACTCAGATTCAAACTGCCTCTGTGTTTGTTTCTGTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAAATGAATGACCAGGCAACTGATAGGGTAGAGGAATTTCTATTTTCATTAGGCATGTACATTTCCTaGAGAGGAGGACACAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKMNDQATDRVEEFLFSLGMYIS*RGGHRR Trigger: TCTCCTGTGTCCTCCTCTGCAGGAAATGTACATGCC...TAATGAAAATAGAAATTCCTCTACCCTATCAGTTGCCTGGTCATTCATTTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGATTCTCTGTCTCTTCCACACATGATTTCACTGCACAGCCTACTCTTAAACTTATTAAGTTTTGAATaGAGAGCAGTTGTTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: QDSLSLPHMISLHSLLLNLLSFE*RAVVPT Trigger: GGTGGGAACAACTGCTCTCCATTCAAAACTTAATAA...GTTTAAGAGTAGGCTGTGCAGTGAAATCATGTGTGGAAGAGACAGAGAATCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTAAAATGAATGACCAGGCAACTGATAGGGTAGAGGAATTTCTATTTTCATTATTCTGTCCATGGACTTaGATGCACAGTCTTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GKMNDQATDRVEEFLFSLFCPWT*MHSLLP Trigger: AGGCAGAAGACTGTGCATGCAAGTCCATGGACAGAA...TAATGAAAATAGAAATTCCTCTACCCTATCAGTTGCCTGGTCATTCATTTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAAATTATTGTATATTTACAAGTTTCTCCTGCGTCCCCTCTTCCCCCACAAGGATACTCTCTACATaGTCACATAGTGATTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: SRNYCIFTSFSCVPSSPTRILST*SHSDST Trigger: TGTAGAATCACTATGTGACCATGTAGAGAGTATCCT...TGTGGGGGAAGAGGGGACGCAGGAGAAACTTGTAAATATACAATAATTTCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGCAGGGGATTTTATACCTTAAGAAGCCAAACATTACATCTCTTAGAAACTTCTGCAGAAAAGGGATaGATGCCTAGTCTACAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSRGFYTLRSQTLHLLETSAEKG*MPSLQG Trigger: TCCCTGTAGACTAGGCATCCATCCCTTTTCTGCAGA...AGTTTCTAAGAGATGTAATGTTTGGCTTCTTAAGGTATAAAATCCCCTGCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGCAGGGGATTTTATACCTTAAGAAGCCAAACATTACATCTCTTAGAAACTATAATGCTCAGAGCCTaGGCATCAGTCAGTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSRGFYTLRSQTLHLLETIMLRA*ASVSAF Trigger: AAAAGCACTGACTGATGCTCAGGCTCTGAGCATTAT...AGTTTCTAAGAGATGTAATGTTTGGCTTCTTAAGGTATAAAATCCCCTGCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAAATGAATGACCAGGCAACTGATAGGGTAGAGGAATTTCTATTTTCATTACAGCTCTTTTGTAACTaGATCCCTTGGCAGAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: GKMNDQATDRVEEFLFSLQLFCN*IPWQNS Trigger: AGAATTCTGCCAAGGGATTCAGTTACAAAAGAGCTG...TAATGAAAATAGAAATTCCTCTACCCTATCAGTTGCCTGGTCATTCATTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAAATGAATGACCAGGCAACTGATAGGGTAGAGGAATTTCTATTTTCATTAGGTAAATTCTGTCCATaGACTTGCATGCACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GKMNDQATDRVEEFLFSLGKFCP*TCMHSL Trigger: AAGACTGTGCATGCAAGTCCATGGACAGAATTTACC...TAATGAAAATAGAAATTCCTCTACCCTATCAGTTGCCTGGTCATTCATTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTAGTGGCCCCATTTCTAGGGATGCTTTCTTACCCATTATTCTCACTTAAGTCTTATATGAAGAAATaGTCATTTAGTGGGTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: MLVAPFLGMLSYPLFSLKSYMKK*SFSGSG Trigger: TCCAGACCCACTAAATGACCATTTCTTCATATAAGA...CTTAAGTGAGAATAATGGGTAAGAAAGCATCCCTAGAAATGGGGCCACTAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | CAGGTGGTTGTGAGCCACCACGTGGTTGCTGGGATTTaGACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QVVVSHHVVAGI*TQELWKSSQCP Trigger: AGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | CAAGGGGAGGAAGAAGAACTTGGCATCCCAGCCTACTaGGCATCGGATTCGAGGGTGACAGGCAGTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QGEEEELGIPAY*ASDSRVTGSQS Trigger: GCTCTGACTGCCTGTCACCCTCGAATCCGATGCTCAGTAGGCTGGGATGCCAAGTTCTTCTTCCTCCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACCCAGAGCCTGGCAACCTGACACCAGGGAATGGGTGCTGGCATTATTAGTAGTGCTTGGCACAAACTaGTCCCAGCCTCCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPRAWQPDTREWVLALLVVLGTN*SQPPHL Trigger: CAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCAC...TACTAATAATGCCAGCACCCATTCCCTGGTGTCAGGTTGCCAGGCTCTGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | TGTCTCCGTACTCTGCTAGGTTTCACCACCAGGAACTaGACCTTCCACCCAGAGCCTGGCAACCTGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: CLRTLLGFTTRN*TFHPEPGNLTP Trigger: TGGTGTCAGGTTGCCAGGCTCTGGGTGGAAGGTTCAGTTCCTGGTGGTGAAACCTAGCAGAGTACGGAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | CTCAGGATGCCAGGTACTTCTCGCCATAGATCTCCCTaGTTTCTGAGCTGGTCTGGTCCCACAGCATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRMPGTSRHRSP*FLSWSGPTASG Trigger: CCCAGATGCTGTGGGACCAGACCAGCTCAGAAATCAGGGAGATCTATGGCGAGAAGTACCTGGCATCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 72 bp | ACCAAAGCACAAGTCTGCACTGAGCCCAGGATTCTCTaGCTCTTCCACACATGCTGTCCCTGCTCAGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TKAQVCTEPRIL*LFHTCCPCSAY Trigger: GTAGGCTGAGCAGGGACAGCATGTGTGGAAGAGGCAGAGAATCCTGGGCTCAGTGCAGACTTGTGCTTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | TTTCACCACCAGGAACTGAACCTTCCACCCAGAGCCTaGCAACCTGACACCAGGGAATGGGTGCTGGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: FHHQELNLPPRA*QPDTREWVLAL Trigger: TAATGCCAGCACCCATTCCCTGGTGTCAGGTTGCCAGGCTCTGGGTGGAAGGTTCAGTTCCTGGTGGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | CCCATTGCAGGTGGTTGTGAGCCACCACGTGGTTGCTaGGATTTGAACTCAGGAGCTCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PIAGGCEPPRGC*DLNSGALEEQS Trigger: TGACTGCTCTTCCAGAGCTCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGGCACAAACTTGTCCCAGCCTCCTCATCTGTGTGGACCTTCATGGTAGCGTGCTTGGCACAAACTaGTCCCAGCCTCCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLAQTCPSLLICVDLHGSVLGTN*SQPPHL Trigger: CAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCAC...GCTACCATGAAGGTCCACACAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | CCAGGAACTGAACCTTCCACCCAGAGCCTGGCAACCTaGCACCAGGGAATGGGTGCTGGCATTATTAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGTEPSTQSLAT*HQGMGAGIISN Trigger: GTTACTAATAATGCCAGCACCCATTCCCTGGTGTCAGGTTGCCAGGCTCTGGGTGGAAGGTTCAGTTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTGTaGGCCACCACGTGGTTGCTGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGIKTHCRWL*ATTWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGGTTTTGATGCCCTCTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | TCCCCTGTGAAACCATCACGATGCTCCAGAGTATACTaGGAAAGGTCCAGCCTCCTGACCTTCTCACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPVKPSRCSRVY*ERSSLLTFSQG Trigger: GCCCTGTGAGAAGGTCAGGAGGCTGGACCTTTCTCAGTATACTCTGGAGCATCGTGATGGTTTCACAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR TCA 72 bp | TCTGGAGGGAAGCATGGTCTCTTAGTGAGTCTGCAGTaGAGGGAAGGTCACTTAGGGAGTCTGCAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGGKHGLLVSLQ*REGHLGSLQGR Trigger: CCTTCCCTGCAGACTCCCTAAGTGACCTTCCCTTCACTGCAGACTCACTAAGAGACCATGCTTCCCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | GATAGGATGCCAGGTACTTCTCGCCATAGATCTCCCTaGTTTCTGAGCTGGTCTGGTCCCACAGCATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DRMPGTSRHRSP*FLSWSGPTASG Trigger: CCCAGATGCTGTGGGACCAGACCAGCTCAGAAATCAGGGAGATCTATGGCGAGAAGTACCTGGCATCCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR GCA 72 bp | AAACCCATTGCAGGTGGTTGTGAGCCACCACGTGGTTaGTGGGATTTGAACTCAGGAGCTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KPIAGGCEPPRG*WDLNSGALEEQ Trigger: CTGCTCTTCCAGAGCTCCTGAGTTCAAATCCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | GTACATTTCCTGCAGAGGAGGACACAGGAGAGTGCTTaGCACAAACTTGTCCCAGCCTCCTCATCTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VHFLQRRTQESA*HKLVPASSSVW Trigger: CCACACAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGCACTCTCCTGTGTCCTCCTCTGCAGGAAATGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGGATGAGACAGTCAAAGAAAGCCTGCTGGCCTGTGCCAATCCTTCTCAGACCCCAGACAGGTCCTaGTTGCACCTCTTGTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GRDETVKESLLACANPSQTPDRS*LHLLSN Trigger: ATTGGACAAGAGGTGCAACAAGGACCTGTCTGGGGT...CTGAGAAGGATTGGCACAGGCCAGCAGGCTTTCTTTGACTGTCTCATCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | GATGCTCCAGAGTATACTGAGAAAGGTCCAGCCTCCTaGCCTTCTCACAGGGCACAACATGCAGAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DAPEYTEKGPAS*PSHRAQHAEML Trigger: CAGCATCTCTGCATGTTGTGCCCTGTGAGAAGGTCAGGAGGCTGGACCTTTCTCAGTATACTCTGGAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR GCA 72 bp | CATAAGGGCTTAACTAGCCAGGGCAAGTGCATTTCCTaGAGAGGAGGACACAGGGCACTGTTTGGAACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HKGLTSQGKCIS*RGGHRALFGTS Trigger: GCTTGTTCCAAACAGTGCCCTGTGTCCTCCTCTGCAGGAAATGCACTTGCCCTGGCTAGTTAAGCCCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | CTGGCATTATTAGTGACTCTCTCAGACCCCACACCATaGTCGCAGGTGACTTCAGAGCAGGGACACTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LALLVTLSDPTP*SQVTSEQGHFH Trigger: ATGGAAGTGTCCCTGCTCTGAAGTCACCTGCGACCATGGTGTGGGGTCTGAGAGAGTCACTAATAATGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | AAGGCATGGTCACTTAGTGAGTCTGCAGGGAAGGCATaGTCACTTAGTGAGTCTGCAGAAAAGGGATGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KAWSLSESAGKA*SLSESAEKGWA Trigger: CGCCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAGTGACCATGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | AAGGCATGGTCACTTAGTGAGTCTGCAGGGAAGGCATaGTCACTTAGTGAGTCTGCAGGGAAGGCATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KAWSLSESAGKA*SLSESAGKAWS Trigger: TGACCATGCCTTCCCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAGTGACCATGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | TCTGGTCCCACAGCATCTGGGTATTTGAGCATAATCTaGCACTACTGGTCACACCGGTCAGGAAGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGPTASGYLSII*HYWSHRSGRSQ Trigger: CTGGCTTCTTCCTGACCGGTGTGACCAGTAGTGCCAGATTATGCTCAAATACCCAGATGCTGTGGGACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR GCA 72 bp | GTGTCTGCAAGGGCTGAGACAAAGCAAGAAGAAGCCTaGTGTCCTGTAGAAACCCTTCTCAGGACATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VSARAETKQEEA*CPVETLLRTFP Trigger: GGGAAATGTCCTGAGAAGGGTTTCTACAGGACAGCAGGCTTCTTCTTGCTTTGTCTCAGCCCTTGCAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 72 bp | TCAGGCATCTATGAAAGTCCCACCAAAGCACAAGTCTaGACTGAGCCCAGGATTCTCTGCCTCTTCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: SGIYESPTKAQV*TEPRILCLFHT Trigger: TGTGTGGAAGAGGCAGAGAATCCTGGGCTCAGTGCAGACTTGTGCTTTGGTGGGACTTTCATAGATGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | GCTTGGCACAAACTTGTCCCAGCCTCCTCATCTGTGTaGACCTTCATGGTAGCCATGATGCTCATAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AWHKLVPASSSV*TFMVAMMLIIW Trigger: CCAGATTATGAGCATCATGGCTACCATGAAGGTCCACACAGATGAGGAGGCTGGGACAAGTTTGTGCCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | CACATTTCTACTGAGAGAAGAGGAGTCAGGCATCTATaGGAACCCCTTCCCAGGGCAAGTCTGTACTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HISTERRGVRHL*EPLPRASLYLA Trigger: GGCTAAGTACAGACTTGCCCTGGGAAGGGGTTCCCATAGATGCCTGACTCCTCTTCTCTCAGTAGAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | GGGAAATCCAGTAGAGAACAGCATCCACAAGAAAGGTaGGCAGGTAGCTCAAGGGGAGGAAGAAGAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GKSSREQHPQER*AGSSRGGRRTW Trigger: CCAAGTTCTTCTTCCTCCCCTTGAGCTACCTGCCCACCTTTCTTGTGGATGCTGTTCTCTACTGGATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTACTGAGAGAAGAGGAGTCAGGCATCTATGGGAACCCCTTCCCAGGGCACTCAGACCTAGTACCTaGGACAGAGGTGATTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISTERRGVRHLWEPLPRALRPST*DRGDFR Trigger: TCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGAG...TGCCCTGGGAAGGGGTTCCCATAGATGCCTGACTCCTCTTCTCTCAGTAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCTGCACTGAGCCCAGGATTCTCTGCCTCTTCCACACATGCTGTCCCTGCTCACCTCTGGTTCATTTaGTTTAGGCATTTCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSALSPGFSASSTHAVPAHLWFI*FRHFRQ Trigger: CTGTCTGAAATGCCTAAACAAAATGAACCAGAGGTG...AGCAGGGACAGCATGTGTGGAAGAGGCAGAGAATCCTGGGCTCAGTGCAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCGCTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTCCAGACAGGTCCTTGTaGCACCTCTTGTCCAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: QSLSSDTRRGHQNPLQVVPDRSL*HLLSNL Trigger: CAAATTGGACAAGAGGTGCAACAAGGACCTGTCTGG...AACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAGCGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | GAGTTCCACAACCGGTTCCAGGAGGTCTCTCCCTTTTaGGGTCAATCGCCTCAGTCTATGAAACTTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: EFHNRFQEVSPF*GQSPQSMKLVT Trigger: TGTGACAAGTTTCATAGACTGAGGCGATTGACCTCAAAAGGGAGAGACCTCCTGGAACCGGTTGTGGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | AAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGATaGGCGCCTAGTCTACAGGGAATTGATGATCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: KAWSLSESAEKG*APSLQGIDDHP Trigger: TGGGTGATCATCAATTCCCTGTAGACTAGGCGCCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | TCCCTGATTTCTGAGCTGGTCTGGTCCCACAGCATCTaGGTATTTGAGCATAATCTGGCACTACTGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SLISELVWSHSI*VFEHNLALLVT Trigger: TGTGACCAGTAGTGCCAGATTATGCTCAAATACCCAGATGCTGTGGGACCAGACCAGCTCAGAAATCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCTGCACTGAGCCCAGGATTCTCTGCCTCTTCCACACATGCTGTCCCTGCTTCTTTGCCTATTTCATaGGTCATCATCAGTCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSALSPGFSASSTHAVPASLPIS*VIISLK Trigger: CTTGAGACTGATGATGACCAATGAAATAGGCAAAGA...AGCAGGGACAGCATGTGTGGAAGAGGCAGAGAATCCTGGGCTCAGTGCAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | TTACAGTTCCTACATCTCCCCAGGTATGCACATAGGTaGAGACTTCAGAGGGCTTTCTCAGGCTTCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LQFLHLPRYAHR*RLQRAFSGFRE Trigger: TTCCCTGAAGCCTGAGAAAGCCCTCTGAAGTCTTCACCTATGTGCATACCTGGGGAGATGTAGGAACTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 72 bp | AGGTCCAGCCTCCTGACCTTCTCACAGGGCACAACATaGAGAGATGCTGTTGATGTACTACAGCATGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSSLLTFSQGTT*RDAVDVLQHDL Trigger: TAAATCATGCTGTAGTACATCAACAGCATCTCTGCATGTTGTGCCCTGTGAGAAGGTCAGGAGGCTGGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR GCA 72 bp | GCTCCATGCAGTCAGTCACCCCAGACAGGTCCTTGTTaGACCTCTTGTCCAATTTGTTTAGCCTTTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: APCSQSPQTGPC*TSCPICLAFSD Trigger: ATCTGAAAAGGCTAAACAAATTGGACAAGAGGTGCAACAAGGACCTGTCTGGGGTGACTGACTGCATGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | GTTTGGAACAAGCTGGTCCTAACCTCCTCATCTGTGTaGATCTTCATTGAAGGCCATAATGCTCAGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VWNKLVLTSSSV*IFIEGHNAQSL Trigger: CAGGCTCTGAGCATTATGGCCTTCAATGAAGATCCACACAGATGAGGAGGTTAGGACCAGCTTGTTCCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | AAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGATaGATGCCTAGTCTACAGGGAGTTGATGATCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: KAWSLSESAEKG*MPSLQGVDDHP Trigger: TGGGTGATCATCAACTCCCTGTAGACTAGGCATCCATCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACCCCTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCATCTTTGCCTATTTCTTaGGTCATCATCAGTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EPLPRASLYLAQDSLSLPSLPIS*VIISLE Trigger: CTCAAGACTGATGATGACCAAAGAAATAGGCAAAGA...TGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAGGGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAGGAGCTCTGGAAGAGCAGTCAGTGCCCTTAACTGCTGAGCCATCTCTGAATACAAATGAAAAATaGGTGTCTCCGTACTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSGALEEQSVPLTAEPSLNTNEK*VSPYSA Trigger: AGCAGAGTACGGAGACACCAATTTTTCATTTGTATT...CAGAGATGGCTCAGCAGTTAAGGGCACTGACTGCTCTTCCAGAGCTCCTGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTAGTGGCCCCATTTCTAGGGATGCTTTCTTACCCATTATTCTCACTTAAGGGGAGGAAGAAGAACTaGGCATCCCAGCCTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MLVAPFLGMLSYPLFSLKGRKKN*ASQPTE Trigger: CTCAGTAGGCTGGGATGCCAAGTTCTTCTTCCTCCC...CTTAAGTGAGAATAATGGGTAAGAAAGCATCCCTAGAAATGGGGCCACTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTGAGTCTGCAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGAAAAACACTCCCTCCATaGACCCTCTTAATTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSESAGKAWSLSESAEKGKTLPP*TLLIPS Trigger: AGAAGGAATTAAGAGGGTCAATGGAGGGAGTGTTTT...TCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | ATGGGTCTTGGTTGGGTACAGTGCAATTCTCATGCATaGTTGAGTGAAACATCCTCTTGTGCCAGCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: MGLGWVQCNSHA*LSETSSCASLS Trigger: ACTCAGGCTGGCACAAGAGGATGTTTCACTCAATCATGCATGAGAATTGCACTGTACCCAACCAAGACCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR TCA 72 bp | GAAAGTTGTTGTTCCTACTTCAGTGTCTGCAAGGGCTaGGACAAAGCAAGAAGAAGCCTGCTGTCCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ESCCSYFSVCKG*DKARRSLLSCR Trigger: TCTACAGGACAGCAGGCTTCTTCTTGCTTTGTCTCAGCCCTTGCAGACACTGAAGTAGGAACAACAACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | AGGTCTCTCCCTTTTGAGGTCAATCGCCTCAGTCTATaGAACTTGTCACATAGATCCTACTGGAGGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RSLPFEVNRLSL*NLSHRSYWRWC Trigger: ACACCACCTCCAGTAGGATCTATGTGACAAGTTTCATAGACTGAGGCGATTGACCTCAAAAGGGAGAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | GTGTGGACCTTCATGGTAGCCATGATGCTCATAATCTaGGCATCAGCCAGCTCTTTTGTAACTGAATCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VWTFMVAMMLII*ASASSFVTESL Trigger: AAGGGATTCAGTTACAAAAGAGCTGGCTGATGCCCAGATTATGAGCATCATGGCTACCATGAAGGTCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | CTCCCTGATTTCTCCCTGGTCTGGTCCCACAGCACCTaGATGTTTGATGATAATCTTTCACTCTCAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LPDFSLVWSHST*MFDDNLSLSVI Trigger: TATGACTGAGAGTGAAAGATTATCATCAAACATCCAGGTGCTGTGGGACCAGACCAGGGAGAAATCAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTGAGTCTGCAGGGAAGGCATGGTCACTTAGTGAGTCTGCAGAAAAGGGAAAATTCAGGTTTGTGTaGCACCTCTGGTTCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSESAGKAWSLSESAEKGKFRFV*HLWFIL Trigger: CAAAATGAACCAGAGGTGCAACACAAACCTGAATTT...TCCCTTTTCTGCAGACTCACTAAGTGACCATGCCTTCCCTGCAGACTCACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | AACCTAGCAGCAGGCAGAGCCAGCTCTCAGAGGCCATaGGAAGTTCAAGACCCTTATTCTTTTGAAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: NLAAGRASSQRP*EVQDPYSFEKC Trigger: ACATTTTTCAAAAGAATAAGGGTCTTGAACTTCTCATGGCCTCTGAGAGCTGGCTCTGCCTGCTGCTAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR GCA 72 bp | AAGCCGAGGCCTACAAGTAAATTCCGTTCATGGACCTaGATGCACAGAATTCTGCACTATTTGCTGGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KPRPTSKFRSWT*MHRILHYLLVL Trigger: TAACACCAGCAAATAGTGCAGAATTCTGTGCATGCAGGTCCATGAACGGAATTTACTTGTAGGCCTCGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | GCACAGTCTTCTGCCTTATGTGTTATTATTAAGTTTTaGATGGAGAGCAGTTGTTCCCACCTCGGTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AQSSALCVIIKF*MESSCSHLGSW Trigger: CCAGCTACCGAGGTGGGAACAACTGCTCTCCATTCAAAACTTAATAATAACACATAAGGCAGAAGACTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | TGGTTGGGTACAGTGCAATTCTCATGCATGATTGAGTaGAACATCCTCTTGTGCCAGCCTGAGTCATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: WLGTVQFSCMIE*NILLCQPESFY Trigger: ATAGAATGACTCAGGCTGGCACAAGAGGATGTTTCACTCAATCATGCATGAGAATTGCACTGTACCCAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR TCA 72 bp | GCTCAGAGCCTGAGCATCAGTCAGTGCTTTTGTATCTaGATCCCTTGGCAGAATTCTTTGCCTATTTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: AQSLSISQCFCI*IPWQNSLPISL Trigger: CAATGAAATAGGCAAAGAATTCTGCCAAGGGATTCAGATACAAAAGCACTGACTGATGCTCAGGCTCTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGATTCTCTGTCTCTTCCACACATGATTTCACTGCACAGCCTACTCTTAAACTCCTTGTTGCACCTCTaGTCCAATTTGTTTAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QDSLSLPHMISLHSLLLNSLLHL*SNLFSL Trigger: AAGGCTAAACAAATTGGACAAGAGGTGCAACAAGGA...GTTTAAGAGTAGGCTGTGCAGTGAAATCATGTGTGGAAGAGACAGAGAATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155739.2 |
||
| 3UTR CCA 72 bp | AGTCTTCTGCCTTATGTGTTATTATTAAGTTTTGAATaGAGAGCAGTTGTTCCCACCTCGGTAGCTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLPYVLLLSFE*RAVVPTSVAGR Trigger: CCTTCCAGCTACCGAGGTGGGAACAACTGCTCTCCATTCAAAACTTAATAATAACACATAAGGCAGAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAAATTATTGTTTACTTTACAAGTTTCTCCTGTGACTTCTCAGTCTCCATGAGGGGACATGAGAAGTaGCCTGGGACAAAGATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AEIIVYFTSFSCDFSVSMRGHEK*PGTKID Trigger: ATCTATCTTTGTCCCAGGCAACTTCTCATGTCCCCT...CATGGAGACTGAGAAGTCACAGGAGAAACTTGTAAAGTAAACAATAATTTCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR GCA 72 bp | AAACTGAGGCCTACAGGTAAATTCTGTCCATGGACTTaGATGCACAGTCTTCTGCCTTATGTGTTATTATTA | + |
|
Preference number: 3 (lower is better) Translates to: KLRPTGKFCPWT*MHSLLPYVLLL Trigger: TAATAATAACACATAAGGCAGAAGACTGTGCATGCAAGTCCATGGACAGAATTTACCTGTAGGCCTCAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATTATTGTATATTTACAAGTTTCTCCTGCGTCCCCTCTTCCCCCACATTTTCTTTGCCTATTTCTTaGGTCATCATCAGTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RNYCIFTSFSCVPSSPTFSLPIS*VIISLE Trigger: CTCAAGACTGATGATGACCAAAGAAATAGGCAAAGA...AAATGTGGGGGAAGAGGGGACGCAGGAGAAACTTGTAAATATACAATAATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR GCA 72 bp | AAGGCTAGAGCTTACAAGGTCATGGTAAACCTGCCATaGAGTGAGACATCTCAAAATAAAATGAAACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KARAYKVMVNLP*SETSQNKMKQD Trigger: ATCTTGTTTCATTTTATTTTGAGATGTCTCACTGCATGGCAGGTTTACCATGACCTTGTAAGCTCTAGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR GCA 72 bp | AGTGCTTTTGTATCTGAATCCCTTGGCAGAATTCTTTaGCTATTTCATTGGTCATCATCAGTCTCAAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAFVSESLGRIL*LFHWSSSVSSS Trigger: ACTACTTGAGACTGATGATGACCAATGAAATAGGCAAAGAATTCTGCCAAGGGATTCAGATACAAAAGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR TCA 72 bp | AAACAAGATGCAGTATCAGTACATGGTTTGAAGAAATaGGTCCAAAATCAAGAATGCTTCCTGCTGTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KQDAVSVHGLKK*VQNQECFLLFS Trigger: ACTGAACAGCAGGAAGCATTCTTGATTTTGGACTCATTTCTTCAAACCATGTACTGATACTGCATCTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR TCA 72 bp | GAACTAATAACCAGAATTTTATTGTATTCTAATAGTTaGAGATCTCAGGTTGGAGGGATGGGTCTTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ELITRILLYSNS*RSQVGGMGLGW Trigger: CCAACCAAGACCCATCCCTCCAACCTGAGATCTTCAACTATTAGAATACAATAAAATTCTGGTTATTAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR TCA 72 bp | TCAGTCTCAAGTAGTATCATAGGAGAATTAATGAGATaGAGTGTGTTGACTAAGAACCCCAGAGTAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SVSSSIIGELMR*SVLTKNPRVKH Trigger: GTGTTTTACTCTGGGGTTCTTAGTCAACACACTTCATCTCATTAATTCTCCTATGATACTACTTGAGACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CCA 72 bp | TATGAAAGACTAGTGTTGAGAAGGATACTCTCTACATaGTCACATAGTGATTCTACAGGAAAAAGACTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YERLVLRRILST*SHSDSTGKRLV Trigger: CACAAGTCTTTTTCCTGTAGAATCACTATGTGACCATGTAGAGAGTATCCTTCTCAACACTAGTCTTTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR TCA 72 bp | GTTAATAAATCTTTAACGGTCAGTGCTCTTAACCACTaGACTAACTTTCCAGCCCGATGGTCAATTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: VNKSLTVSALNH*TNFPARWSIII Trigger: AATAATAATTGACCATCGGGCTGGAAAGTTAGTTCAGTGGTTAAGAGCACTGACCGTTAAAGATTTATTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGATGAGACAGTCAAAGAAAGCCTGCTGGCCTGTGCCAATCCTTCTCAGCAGCCAGCACCCTCATaGCTCTCCTGTCCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRDETVKESLLACANPSQQPAPS*LSCPAV Trigger: GACAGCTGGACAGGAGAGGCATGAGGGTGCTGGCTG...CTGAGAAGGATTGGCACAGGCCAGCAGGCTTTCTTTGACTGTCTCATCCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CAA 72 bp | CTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATaGCAGGTGGTTGTGAGCCACCACGTGGTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSDTRRGHQNP*QVVVSHHVVAG Trigger: CCCAGCAACCACGTGGTGGCTCACAACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGATGAGACAGTCAAAGAAAGCCTGCTGGCCTGTGCCAATCCTTCTCAGTGCTCCTTCACCCACTaGGTGGCTGTCACAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRDETVKESLLACANPSQCSFTH*VAVTIL Trigger: GAGTATTGTGACAGCCACTCAGTGGGTGAAGGAGCA...CTGAGAAGGATTGGCACAGGCCAGCAGGCTTTCTTTGACTGTCTCATCCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACATTTCTACTGAGAGAAGAGGAGTCAGGCATCTATGGGAACCCCTTCCCTCAGAGCATGCTCCATaGAGTCAGTCACCCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PHISTERRGVRHLWEPLPSEHAP*SQSPQT Trigger: TGTCTGGGGTGACTGACTGCATGGAGCATGCTCTGA...GGGAAGGGGTTCCCATAGATGCCTGACTCCTCTTCTCTCAGTAGAAATGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR CAA 72 bp | AGTGCATTTCCTGCAGAGGAGGACACAGGGCACTGTTaGGAACAAGCTGGTCCTAACCTCCTCATCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAFPAEEDTGHC*EQAGPNLLICV Trigger: CACACAGATGAGGAGGTTAGGACCAGCTTGTTCCAAACAGTGCCCTGTGTCCTCCTCTGCAGGAAATGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTAATTTCCCCTAAATATTCTCTCTCTCAAACTCTACCTACATCTCCCCAGCAGCCAGCACCCTCATaGCTCTCCTGTCCAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLISPKYSLSQTLPTSPQQPAPS*LSCPAV Trigger: GACAGCTGGACAGGAGAGGCATGAGGGTGCTGGCTG...CTGGGGAGATGTAGGTAGAGTTTGAGAGAGAGAATATTTAGGGGAAATTAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCAAAGACATATTTGTCTTaGAGATGGCTCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPLPRASLYLAQDSLSLPKTYLS*RWLTTC Trigger: GCAGGTGGTGAGCCATCTCCAAGACAAATATGTCTT...TGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAGGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCTACTGAGAGAAGAGGAGTCAGGCATCTATGGGAACCCCTTCCCAGGGCAACATGTGCAAAGTCCTaGTTTTTCATCCACTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTERRGVRHLWEPLPRATCAKS*FFIHSL Trigger: CAACGAGTGGATGAAAAAGCAGGACTTTGCACATGT...TGCCCTGGGAAGGGGTTCCCATAGATGCCTGACTCCTCTTCTCTCAGTAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS-3UTR TCA 90 bp | TTATTAGTAACTCCCTCAGACCTAGTACCTTGGACAGAGGTGATTTCAGAACAGTGCTCCTTCACCCACTaGGTGGCTGTCACAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVTPSDLVPWTEVISEQCSFTH*VAVTIL Trigger: GAGTATTGTGACAGCCACTCAGTGGGTGAAGGAGCA...CTGTTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGAGGGAGTTACTAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCGCTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTCACATCCAGTACATGTaGAAAGTCCTGCTTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLSSDTRRGHQNPLQVVHIQYM*KVLLFH Trigger: ATGAAAAAGCAGGACTTTGCACATGTACTGGATGTG...AACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAGCGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR CAA 72 bp | GCTGGCATTATTAGTAACTCCCTCAGACCTAGTACCTaGGACAGAGGTGATTTCAGAACAGGGATAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGIISNSLRPST*DRGDFRTGIIP Trigger: TGGAATTATCCCTGTTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGAGGGAGTTACTAATAATGCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| 3UTR CAA 72 bp | ATTTCTCCCTGGTCTGGTCCCACAGCACCTGGATGTTaGATGATAATCTTTCACTCTCAGTCATATCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISPWSGPTAPGC*MIIFHSQSYQS Trigger: TGACTGATATGACTGAGAGTGAAAGATTATCATCAAACATCCAGGTGCTGTGGGACCAGACCAGGGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| CDS-3UTR CCA 90 bp | TTATTAGTAACTCCCTCAGACCTAGTACCTTGGACAGAGGTGATTTCAGAACAGTGGTCCCACAGCATCTaGGTATTTGAGCATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVTPSDLVPWTEVISEQWSHSI*VFEHNL Trigger: CAGATTATGCTCAAATACCCAGATGCTGTGGGACCA...CTGTTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGAGGGAGTTACTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| 3UTR CAA 72 bp | ACCAAATTCAGGTTTGTGTTGCACCTCTGGTTCATTTaGTTTAGGCATTTCAGACAGGATGCCAGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKFRFVLHLWFI*FRHFRQDARYF Trigger: GAAATACCTGGCATCCTGTCTGAAATGCCTAAACAAAATGAACCAGAGGTGCAACACAAACCTGAATTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| 3UTR CAA 72 bp | CCTGAGCATCAGTCAGTGCTTTTGTATCTGAATCCCTaGGCAGAATTCTTTGCCTATTTCATTGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PEHQSVLLYLNP*AEFFAYFIGHH Trigger: ATGATGACCAATGAAATAGGCAAAGAATTCTGCCAAGGGATTCAGATACAAAAGCACTGACTGATGCTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGTCCATGGACTTGCATGCACAGTCTTCTGCCTTATGTGTTATTATTAAGAAGACATATTTGTCTTaGAGATGGCTCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSMDLHAQSSALCVIIKKTYLS*RWLTTC Trigger: GCAGGTGGTGAGCCATCTCCAAGACAAATATGTCTT...CTTAATAATAACACATAAGGCAGAAGACTGTGCATGCAAGTCCATGGACAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACAATGACACTGGAGACGTaGACCACACGACCCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSQGKSVLSPGFSVSSTMTLET*TTRPLA Trigger: GGCGAGGGGTCGTGTGGTCAACGTCTCCAGTGTCAT...TGTGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS GCA 90 bp | TCGATCATGCCCAACAGGTTCACATCCAGTACATGTGCAAAGTCCTaGTTTTTCATCCACTCGTTGGGACCCGAGGGGGTGGAGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIMPNRFTSSTCAKS*FFIHSLGPEGVEMP Trigger: TGGCATCTCCACCCCCTCGGGTCCCAACGAGTGGATGAAAAAGCAGGACTTTGCACATGTACTGGATGTGAACCTGTTGGGCATGATCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACACATGCCAGACAGGTCCTTGTaGCACCTCTTGTCCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRASLYLAQDSLSLPHMPDRSL*HLLSNL Trigger: CAAATTGGACAAGAGGTGCAACAAGGACCTGTCTGG...CATGTGTGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCTGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCGCTATCTTCAGACACCAGAAGAGGGCATCAAAACCCATTGCAGGTGGTTGTGATGAAGACATATTaGTCTTGGAGATGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QSLSSDTRRGHQNPLQVVVMKTY*SWRWLT Trigger: GGTGAGCCATCTCCAAGACAAATATGTCTTCATCAC...AACCACCTGCAATGGGTTTTGATGCCCTCTTCTGGTGTCTGAAGATAGCGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAGTCTGTACTTAGCCCAGGATTCTCTGTCTCTTCCACACATGATTTCAGAAGACATATTTGTCTaGGAGATGGCTCACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RASLYLAQDSLSLPHMISEDIFV*EMAHHL Trigger: CAGGTGGTGAGCCATCTCCAAGACAAATATGTCTTC...TGAAATCATGTGTGGAAGAGACAGAGAATCCTGGGCTAAGTACAGACTTGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR CAA 90 bp | GAATGCTTCCTGCTGTTCAGTATAACCCAAATTCATTTCCTGACAGCCATATTGACCCCAGACAGGTCCTaGTTGCACCTCTTGTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ECFLLFSITQIHFLTAILTPDRS*LHLLSN Trigger: ATTGGACAAGAGGTGCAACAAGGACCTGTCTGGGGT...CAATATGGCTGTCAGGAAATGAATTTGGGTTATACTGAACAGCAGGAAGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAATTATTGTATATTTACAAGTTTCTCCTGCGTCCCCTCTTCCCCCACAGAAGACATATTTGTCTaGGAGATGGCTCACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRNYCIFTSFSCVPSSPTEDIFV*EMAHHL Trigger: CAGGTGGTGAGCCATCTCCAAGACAAATATGTCTTC...TGTGGGGGAAGAGGGGACGCAGGAGAAACTTGTAAATATACAATAATTTCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR CAA 90 bp | TTATTAGTAACTCCCTCAGACCTAGTACCTTGGACAGAGGTGATTTCAGAACAGGTGATGAAGACATATTaGTCTTGGAGATGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLVTPSDLVPWTEVISEQVMKTY*SWRWLT Trigger: GGTGAGCCATCTCCAAGACAAATATGTCTTCATCAC...CTGTTCTGAAATCACCTCTGTCCAAGGTACTAGGTCTGAGGGAGTTACTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071646.2 ENSMUST00000155739.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTTCCAAACTTCACTAAAGGATAAAGCCATACTTCAAAACGCAGAGCAATCCTTGTTGCACCTCTaGTCCAATTTGTTTAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVFQTSLKDKAILQNAEQSLLHL*SNLFSL Trigger: AAGGCTAAACAAATTGGACAAGAGGTGCAACAAGGA...TTGCTCTGCGTTTTGAAGTATGGCTTTATCCTTTAGTGAAGTTTGGAACACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS TCA 72 bp | CCCAAAGTAGGAGAGCTCCCTCCACCTGCCTCACCCTaGAGAAGCGCAGAAGCGTCCACAGGCCCACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PKVGELPPPASP*RSAEASTGPPV Trigger: CACTGGTGGGCCTGTGGACGCTTCTGCGCTTCTTCAGGGTGAGGCAGGTGGAGGGAGCTCTCCTACTTTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125163.2 |
||
| CDS CAA 72 bp | CCAAAGAGAGACACTCGACCCATGACACTGGAGACGTaGACCACACGACCCCTCGCCTTCCTCACTAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PKRDTRPMTLET*TTRPLAFLTKG Trigger: GCCTTTAGTGAGGAAGGCGAGGGGTCGTGTGGTCAACGTCTCCAGTGTCATGGGTCGAGTGTCTCTCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||
| CDS GCA 72 bp | CCCAACAGGTTCACATCCAGTACATGTGCAAAGTCCTaGTTTTTCATCCACTCGTTGGGACCCGAGGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PNRFTSSTCAKS*FFIHSLGPEGV Trigger: CACCCCCTCGGGTCCCAACGAGTGGATGAAAAAGCAGGACTTTGCACATGTACTGGATGTGAACCTGTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071646.2 |
||