Pregenerated sensors for RDH13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008435Ensembl transcript IDs: ENSMUST00000008579.14, ENSMUST00000119485.8, ENSMUST00000138798.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCCACTCTGTCCTGAGCACTTCGGGGCTAACCAAGACAGGGTCTaGCAGGGTTTCCACTGGATCACAGCCACTGTCCAGCACACAAGG | + |
|
Preference number: 1 (lower is better) Translates to: IPLCPEHFGANQDRV*QGFHWITATVQHTR Trigger: CCTTGTGTGCTGGACAGTGGCTGTGATCCAGTGGAAACCCTGGCAGACCCTGTCTTGGTTAGCCCCGAAGTGCTCAGGACAGAGTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR GCA 90 bp | CACCTGATGGACCATCTCCCCAGTAACCAACAGAGTACATGGACCTaGCATCCCCTGAGCCAGTGCCTACCTGTGGTCCAACTCAATGTA | + |
|
Preference number: 1 (lower is better) Translates to: HLMDHLPSNQQSTWT*HPLSQCLPVVQLNV Trigger: TACATTGAGTTGGACCACAGGTAGGCACTGGCTCAGGGGATGGCAGGTCCATGTACTCTGTTGGTTACTGGGGAGATGGTCCATCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR TCA 90 bp | GAACTGGTTCCATGCAAGTTCCATCCACACACAGCCATGATGCGCTaGACCCTGGAACGGCCAGCCAGACTAAAACTTCCCTGCCTTAAG | + |
|
Preference number: 1 (lower is better) Translates to: ELVPCKFHPHTAMMR*TLERPARLKLPCLK Trigger: CTTAAGGCAGGGAAGTTTTAGTCTGGCTGGCCGTTCCAGGGTTCAGCGCATCATGGCTGTGTGTGGATGGAACTTGCATGGAACCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR CCA 90 bp | GTGAAGATTCACACAGTGAGCATAAGGAGAGCCACCACCATGGGCTaGAGACCAAGACTGAATAAAAAGCAGAGGCTTCTGAGGTTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: VKIHTVSIRRATTMG*RPRLNKKQRLLRLP Trigger: TGGCAACCTCAGAAGCCTCTGCTTTTTATTCAGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCTTATGCTCACTGTGTGAATCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR CCA 90 bp | TGGAGCTGGCTTACAGTTGAGAAGTTTAGTCTACTATTGTCACAGTaGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: WSWLTVEKFSLLLSQ*EAWQHTGRFGAGGA Trigger: AGCTCCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTGTAAGCCAGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR TCA 90 bp | GGCATAGTAATACATGCCTTTAATTCCAGGCATGGCAGATCTCTGTaGGTTCAAGGCCAGCCTAGTCTACATAGCAAGTTCCAGGAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: GIVIHAFNSRHGRSL*VQGQPSLHSKFQEG Trigger: GCCTTCCTGGAACTTGCTATGTAGACTAGGCTGGCCTTGAACTCACAGAGATCTGCCATGCCTGGAATTAAAGGCATGTATTACTATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 90 bp | GATGGCCTTGAACTCTTGATCCTCCTGCCTCTCCCTCTTAAGTGCTaGAGTTACCGATATGTGCCACTACCCCTAACATGTTACTGTAAT | + |
|
Preference number: 1 (lower is better) Translates to: DGLELLILLPLPLKC*SYRYVPLPLTCYCN Trigger: ATTACAGTAACATGTTAGGGGTAGTGGCACATATCGGTAACTCCAGCACTTAAGAGGGAGAGGCAGGAGGATCAAGAGTTCAAGGCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR GCA 90 bp | TTTAAATCTATGAATCAGCTGTTTAGAGATTTCACTGTTTTGCTTTaGTTTAACAGGATCTTGTATAGCCCAAGCTGGCAGAGGATGGCC | + |
|
Preference number: 1 (lower is better) Translates to: FKSMNQLFRDFTVLL*FNRILYSPSWQRMA Trigger: GGCCATCCTCTGCCAGCTTGGGCTATACAAGATCCTGTTAAAGCAAAGCAAAACAGTGAAATCTCTAAACAGCTGATTCATAGATTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCCCTTTCTGAGTCTGGCGAGAGCTTCAGACCCACACCATCCTTAAGGGAGGGACCTGCCATCCCCTaGGCCAGTGCCTACCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AALSESGESFRPTPSLREGPAIP*ASAYLW Trigger: CCACAGGTAGGCACTGGCTCAGGGGATGGCAGGTCC...CTCCCTTAAGGATGGTGTGGGTCTGAAGCTCTCGCCAGACTCAGAAAGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTCAAGGCCAGCCTAGTCTACATAGCAAGTTCCAGGAAGGCCAGGGTTACACAGAGTACATGGACCTaGCATCCCCTGAGCCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: EFKASLVYIASSRKARVTQSTWT*HPLSQC Trigger: GCACTGGCTCAGGGGATGGCAGGTCCATGTACTCTG...TGTAACCCTGGCCTTCCTGGAACTTGCTATGTAGACTAGGCTGGCCTTGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTGCCCTTTCTGAGTCTGGCGAGAGCTTCAGACCCACACCATCCTTAAGGGAGGTTCCTGCCCTGGCTTaGCTCTTCCATGATAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: AALSESGESFRPTPSLREVPALA*LFHDKL Trigger: TAGTTTATCATGGAAGAGGCAAGCCAGGGCAGGAAC...CTCCCTTAAGGATGGTGTGGGTCTGAAGCTCTCGCCAGACTCAGAAAGGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCACAGTGGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGAGCTGTTCATGAGGGTCTGTaGTCAGAAGCAGCCACATCC | + |
|
Preference number: 2 (lower is better) Translates to: LSQWEAWQHTGRFGAGGAVHEGL*SEAATS Trigger: GGATGTGGCTGCTTCTGACCACAGACCCTCATGAAC...AGCTCCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTCCAGCACACAAGGTGTCCACGGCTGCCCTTTCTGAGTCTGGCGAGAGCTCAATCAAGAGCTGTCTaGTTCATTTGGTTGTCAACC | + |
|
Preference number: 2 (lower is better) Translates to: TVQHTRCPRLPFLSLARAQSRAV*FIWLST Trigger: GGTTGACAACCAAATGAACCAGACAGCTCTTGATTG...AGCTCTCGCCAGACTCAGAAAGGGCAGCCGTGGACACCTTGTGTGCTGGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | AAACTAAAACCTATGACTCAGAGCTGCCACTATGGGTCAGAGGTGAAGGCCCTCAACCAACAGAGTACATaGACCTGCCATCCCCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KLKPMTQSCHYGSEVKALNQQST*TCHPLS Trigger: GCTCAGGGGATGGCAGGTCCATGTACTCTGTTGGTT...GAGGGCCTTCACCTCTGACCCATAGTGGCAGCTCTGAGTCATAGGTTTTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | GATTCACACAGTGAGCATAAGGAGAGCCACCACCATGGGCTGGAGACCAAGACTGTGGCAGAAGAGAACTaGTTCCATGCAAGTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: DSHSEHKESHHHGLETKTVAEEN*FHASSI Trigger: GATGGAACTTGCATGGAACCAGTTCTCTTCTGCCAC...AGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCTTATGCTCACTGTGTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCACAGTGGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGAGCTTGCTTCTGTCAGAAATaGTGTCCCAGCAAGACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSQWEAWQHTGRFGAGGACFCQK*CPSKTN Trigger: GTTTGTCTTGCTGGGACAGCATTTCTGACAGAAGCA...AGCTCCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCCACAGGTTGTCCTCTGACCTCCATCATGAATGCACATACAAGGGCATGTCCTGAGTTCCTGCCCTaGCTTGCCTCTTCCATGATA | + |
|
Preference number: 2 (lower is better) Translates to: IPTGCPLTSIMNAHTRACPEFLP*LASSMI Trigger: TATCATGGAAGAGGCAAGCCAGGGCAGGAACTCAGG...ACATGCCCTTGTATGTGCATTCATGATGGAGGTCAGAGGACAACCTGTGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR GCA 90 bp | GACCAGATTCCCACAGGTTGTCCTCTGACCTCCATCATGAATGCACATACAAGGCCTCTCCCTCTTAAGTaGTGGAGTTACCGATATGTG | + |
|
Preference number: 2 (lower is better) Translates to: DQIPTGCPLTSIMNAHTRPLPLK*WSYRYV Trigger: CACATATCGGTAACTCCAGCACTTAAGAGGGAGAGG...CCTTGTATGTGCATTCATGATGGAGGTCAGAGGACAACCTGTGGGAATCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | GATTTCACTGTTTTGCTTTGCTTTAACAGGATCTTGTATAGCCCAAGCTGGCAGGGATGGTGCCATCCTTaGACAGGTAGGCCTGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DFTVLLCFNRILYSPSWQGWCHP*TGRPAQ Trigger: CTGTGCAGGCCTACCTGTCCAAGGATGGCACCATCC...CTGCCAGCTTGGGCTATACAAGATCCTGTTAAAGCAAAGCAAAACAGTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | GATTTCACTGTTTTGCTTTGCTTTAACAGGATCTTGTATAGCCCAAGCTGGCAGGACGCCCACTGTGGATaGTGCCATCCTTGGACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: DFTVLLCFNRILYSPSWQDAHCG*CHPWTG Trigger: ACCTGTCCAAGGATGGCACCATCCACAGTGGGCGTC...CTGCCAGCTTGGGCTATACAAGATCCTGTTAAAGCAAAGCAAAACAGTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCACAGTGGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGAGCTGAAAGAATGAGACACTaGGCCTGGTTTAATCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: LSQWEAWQHTGRFGAGGAERMRH*AWFNHL Trigger: CAGATGATTAAACCAGGCCCAGTGTCTCATTCTTTC...AGCTCCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACTAAAACCTATGACTCAGAGCTGCCACTATGGGTCAGAGGTGAAGGCCCTCTGTGGAGCATTTTCTTaGTTGCTAGCTGATGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KLKPMTQSCHYGSEVKALCGAFS*LLADVG Trigger: TCCTACATCAGCTAGCAATCAAGAAAATGCTCCACA...GAGGGCCTTCACCTCTGACCCATAGTGGCAGCTCTGAGTCATAGGTTTTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | GACCAGATTCCCACAGGTTGTCCTCTGACCTCCATCATGAATGCACATACAAGGAAATTACACAGGAATTaGAGAGATCCTGATCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: DQIPTGCPLTSIMNAHTRKLHRN*RDPDPR Trigger: CCTAGGATCAGGATCTCTCCAATTCCTGTGTAATTT...CCTTGTATGTGCATTCATGATGGAGGTCAGAGGACAACCTGTGGGAATCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | ACTATTGTCACAGTGGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGTCTAACCCCCTGTACTaGTTTTTCAAATACATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TIVTVGSMATHRQIWCWRSNPLY*FFKYIL Trigger: CAAGATGTATTTGAAAAACCAGTACAGGGGGTTAGA...CCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAATAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTTAAGAGTCTACAGTTAAAATTACACAGGAATTGGAGAGATCCTGATCCTTGCCAGGGTTTCCACTaGATCACAGCCACTGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KLKSLQLKLHRNWRDPDPCQGFH*ITATVQ Trigger: CTGGACAGTGGCTGTGATCCAGTGGAAACCCTGGCA...AGGATCAGGATCTCTCCAATTCCTGTGTAATTTTAACTGTAGACTCTTAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTTAAGAGTCTACAGTTAAAATTACACAGGAATTGGAGAGATCCTGATCCTCATGGCAGATCTCTGTaGGTTCAAGGCCAGCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: KLKSLQLKLHRNWRDPDPHGRSL*VQGQPS Trigger: ACTAGGCTGGCCTTGAACTCACAGAGATCTGCCATG...AGGATCAGGATCTCTCCAATTCCTGTGTAATTTTAACTGTAGACTCTTAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CCA 90 bp | CAGTTGAGAAGTTTAGTCTACTATTGTCACAGTGGGAAGCATGGCAACACACAGATGAGACACTGGGCCTaGTTTAATCATCTGAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: QLRSLVYYCHSGKHGNTQMRHWA*FNHLRH Trigger: ATGTCTCAGATGATTAAACCAGGCCCAGTGTCTCAT...CTGTGTGTTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAACATTTAACTGGAGCTGGCTTACAGTTGAGAAGTTTAGTCTACTATTGTTGGTGCTGGAGGAGCTaGGAGTTCTATATTGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: RKHLTGAGLQLRSLVYYCWCWRS*EFYIET Trigger: AGTCTCAATATAGAACTCTCAGCTCCTCCAGCACCA...ACAATAGTAGACTAAACTTCTCAACTGTAAGCCAGCTCCAGTTAAATGTTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR TCA 72 bp | GGGTCAGAGGTGAAGGCCCTCGCTACCAAGCCTAACTaGGTTGGATCCTCAGGAACTCACAAGGAGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: GSEVKALATKPN*VGSSGTHKEGP Trigger: TGGTCCCTCCTTGTGAGTTCCTGAGGATCCAACTCAGTTAGGCTTGGTAGCGAGGGCCTTCACCTCTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR GCA 72 bp | GACCATCTCCCCAGTAACCAACAGAGTACATGGACCTaGCATCCCCTGAGCCAGTGCCTACCTGTGGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DHLPSNQQSTWT*HPLSQCLPVVQ Trigger: TTGGACCACAGGTAGGCACTGGCTCAGGGGATGGCAGGTCCATGTACTCTGTTGGTTACTGGGGAGATGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 72 bp | CTGATGGACCATCTCCCCAGTAACCAACAGAGTACATaGACCTGCCATCCCCTGAGCCAGTGCCTACCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LMDHLPSNQQST*TCHPLSQCLPV Trigger: CACAGGTAGGCACTGGCTCAGGGGATGGCAGGTCCATGTACTCTGTTGGTTACTGGGGAGATGGTCCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR TCA 72 bp | CCATGCAAGTTCCATCCACACACAGCCATGATGCGCTaGACCCTGGAACGGCCAGCCAGACTAAAACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PCKFHPHTAMMR*TLERPARLKLP Trigger: GGGAAGTTTTAGTCTGGCTGGCCGTTCCAGGGTTCAGCGCATCATGGCTGTGTGTGGATGGAACTTGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR CCA 72 bp | TCAGTCCACCACAGCAGCTTTGGTGTCCACTGTCTTTaGACACTGCCCATAACCAGAGTGACTGTCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SVHHSSFGVHCL*TLPITRVTVSP Trigger: AGGGGAGACAGTCACTCTGGTTATGGGCAGTGTCCAAAGACAGTGGACACCAAAGCTGCTGTGGTGGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 72 bp | GGAGAGATCCTGATCCTAGGTCACGCTGGTTTTCTGTaGCAGCAGCTAGCAGCTTTTCATCCCACTCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GEILILGHAGFL*QQLAAFHPTLS Trigger: GGACAGAGTGGGATGAAAAGCTGCTAGCTGCTGCCACAGAAAACCAGCGTGACCTAGGATCAGGATCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTCAAGGCCAGCCTAGTCTACATAGCAAGTTCCAGGAAGGCCAGGGTTACATCCACCACAGCAGCTTaGGTGTCCACTGTCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EFKASLVYIASSRKARVTSTTAA*VSTVFG Trigger: TCCAAAGACAGTGGACACCAAAGCTGCTGTGGTGGA...TGTAACCCTGGCCTTCCTGGAACTTGCTATGTAGACTAGGCTGGCCTTGAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CAA 90 bp | AAACTAAAACCTATGACTCAGAGCTGCCACTATGGGTCAGAGGTGAAGGCCCTCCCAGATTCCCACAGGTaGTCCTCTGACCTCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: KLKPMTQSCHYGSEVKALPDSHR*SSDLHH Trigger: ATGATGGAGGTCAGAGGACAACCTGTGGGAATCTGG...GAGGGCCTTCACCTCTGACCCATAGTGGCAGCTCTGAGTCATAGGTTTTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCACAGTGGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGAGCTCTTCCCTGCCTTAAGTaGCTTCTGTCAGAAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSQWEAWQHTGRFGAGGALPCLK*LLSEML Trigger: CAGCATTTCTGACAGAAGCAACTTAAGGCAGGGAAG...AGCTCCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR TCA 72 bp | GAGAGCTTCAGACCCACACCATCCTTAAGGGAGCAGTaGCCCTTTGCAGTTTGCAATCAAGAGCTGTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESFRPTPSLREQ*PFAVCNQELSG Trigger: ACCAGACAGCTCTTGATTGCAAACTGCAAAGGGTCACTGCTCCCTTAAGGATGGTGTGGGTCTGAAGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 72 bp | CACAGGAATTGGAGAGATCCTGATCCTAGGTCACGCTaGTTTTCTGTGGCAGCAGCTAGCAGCTTTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: HRNWRDPDPRSR*FSVAAASSFSS Trigger: GGATGAAAAGCTGCTAGCTGCTGCCACAGAAAACCAGCGTGACCTAGGATCAGGATCTCTCCAATTCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 72 bp | CACACAGTGAGCATAAGGAGAGCCACCACCATGGGCTaGAGACCAAGACTGAATAAAAAGCAGAGGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HTVSIRRATTMG*RPRLNKKQRLL Trigger: CAGAAGCCTCTGCTTTTTATTCAGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCTTATGCTCACTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACTAAAACCTATGACTCAGAGCTGCCACTATGGGTCAGAGGTGAAGGCCCTCGTGACCCTTTGCAGTTaGCAATCAAGAGCTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KLKPMTQSCHYGSEVKALVTLCS*QSRAVW Trigger: CCAGACAGCTCTTGATTGCAAACTGCAAAGGGTCAC...GAGGGCCTTCACCTCTGACCCATAGTGGCAGCTCTGAGTCATAGGTTTTAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 72 bp | TTTAACAGTAGACCAATCAGTCCACCACAGCAGCTTTaGTGTCCACTGTCTTTGGACACTGCCCATAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: FNSRPISPPQQL*CPLSLDTAHNQ Trigger: CTGGTTATGGGCAGTGTCCAAAGACAGTGGACACCAAAGCTGCTGTGGTGGACTGATTGGTCTACTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTACAGTTGAGAAGTTTAGTCTACTATTGTCACAGTGGGAAGCATGGCAAAAGCCATCTGGGACCTaGAGATTATGGTCCTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: WLTVEKFSLLLSQWEAWQKPSGT*RLWSSM Trigger: CATCGAGGACCATAATCTCAAGGTCCCAGATGGCTT...TTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTGTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR TCA 72 bp | ATACATGCCTTTAATTCCAGGCATGGCAGATCTCTGTaGGTTCAAGGCCAGCCTAGTCTACATAGCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IHAFNSRHGRSL*VQGQPSLHSKF Trigger: GAACTTGCTATGTAGACTAGGCTGGCCTTGAACTCACAGAGATCTGCCATGCCTGGAATTAAAGGCATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR TCA 72 bp | CTTAGGGTACTGCTGACTTCAAGCCATCTGGGACCTTaGGATTATGGTCCTCGATGTCTCTTGGTTTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRVLLTSSHLGP*DYGPRCLLVLK Trigger: TTTCAAAACCAAGAGACATCGAGGACCATAATCTCAAGGTCCCAGATGGCTTGAAGTCAGCAGTACCCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR TCA 72 bp | ATGGCAACACACAGGCAGATTTGGTGCTGGAGGAGCTaGGAGTTCTATATTGAGACTGACAGGAAACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MATHRQIWCWRS*EFYIETDRKQK Trigger: TTTCTGTTTCCTGTCAGTCTCAATATAGAACTCTCAGCTCCTCCAGCACCAAATCTGCCTGTGTGTTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR CCA 72 bp | TATTTGAATGTTAACATTGATTGTAAACACAGGGTGTaGCCGACCTGTAATCTCTGGACCCCAGAGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YLNVNIDCKHRV*PTCNLWTPEAQ Trigger: TTGAGCCTCTGGGGTCCAGAGATTACAGGTCGGCCACACCCTGTGTTTACAATCAATGTTAACATTCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CCA 72 bp | ACTGCTGACTTCAAGCCATCTGGGACCTTGAGATTATaGTCCTCGATGTCTCTTGGTTTTGAAAAGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TADFKPSGTLRL*SSMSLGFEKEV Trigger: TACTTCCTTTTCAAAACCAAGAGACATCGAGGACCATAATCTCAAGGTCCCAGATGGCTTGAAGTCAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR TCA 72 bp | ACATCTTGTCAACTTTCCTATTTCTTAGGGTACTGCTaGCTTCAAGCCATCTGGGACCTTGAGATTATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSCQLSYFLGYC*LQAIWDLEIMV Trigger: GACCATAATCTCAAGGTCCCAGATGGCTTGAAGTCAGCAGTACCCTAAGAAATAGGAAAGTTGACAAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR CCA 72 bp | TTTGAAAAGGAAGTAGATAGTGTTCATGAGGGTCTGTaGTCAGAAGCAGCCACATCCATCTGCAAGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FEKEVDSVHEGL*SEAATSICKKE Trigger: TTCTTTCTTGCAGATGGATGTGGCTGCTTCTGACCACAGACCCTCATGAACACTATCTACTTCCTTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| 3UTR CCA 72 bp | AAGCTTAAGAGTCTACAGTTAAAATTACACAGGAATTaGAGAGATCCTGATCCTAGGTCACGCTGGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KLKSLQLKLHRN*RDPDPRSRWFS Trigger: AGAAAACCAGCGTGACCTAGGATCAGGATCTCTCCAATTCCTGTGTAATTTTAACTGTAGACTCTTAAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR TCA 72 bp | AATAAAAATAAAAGCAAGGTACCTGACATATGCCTGTaGGCACACCTCCATTGGTATCTGCTTCAAGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: NKNKSKVPDICL*AHLHWYLLQVT Trigger: AGTAACTTGAAGCAGATACCAATGGAGGTGTGCTCACAGGCATATGTCAGGTACCTTGCTTTTATTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCAGCACACAAGGTGTCCACGGCTGCCCTTTCTGAGTCTGGCGAGAGCTGTCACACCAGAGCCTTaGAGCCGGTGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQHTRCPRLPFLSLARAVTPEP*SRWLSS Trigger: GGAGCTGAGCCACCGGCTGCAAGGCTCTGGTGTGAC...AGCTCTCGCCAGACTCAGAAAGGGCAGCCGTGGACACCTTGTGTGCTGGACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR TCA 90 bp | ACTATTGTCACAGTGGGAAGCATGGCAACACACAGGCAGATTTGGTGCTGGAGGCTCCCAGGGGATCCATaGGCCATGGCCAAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TIVTVGSMATHRQIWCWRLPGDP*AMAKPT Trigger: GGTGGGCTTGGCCATGGCTCATGGATCCCCTGGGAG...CCTCCAGCACCAAATCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CCA 90 bp | AACCAACAGAGTACATGGACCTGCCATCCCCTGAGCCAGTGCCTACCTGTGGTCTCTTCCCAGGTATGGTaGCCTTGCTGGGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NQQSTWTCHPLSQCLPVVSSQVW*PCWDKP Trigger: GGGCTTGTCCCAGCAAGGCCACCATACCTGGGAAGA...GACCACAGGTAGGCACTGGCTCAGGGGATGGCAGGTCCATGTACTCTGTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CCA 90 bp | GATTCACACAGTGAGCATAAGGAGAGCCACCACCATGGGCTGGAGACCAAGACTGAGCCTTGCAGCCGGTaGCTCAGCTCCTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSHSEHKESHHHGLETKTEPCSR*LSSLVK Trigger: CTTCACCAAGGAGCTGAGCCACCGGCTGCAAGGCTC...AGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCTTATGCTCACTGTGTGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR GCA 90 bp | CTAGAGGATGATGAGAGCATGGCCAGCAGCAGTCTTGGTAACACAGCTCCATCTCAGGTATGGTGGCCTTaGTGGGACAAGCCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEDDESMASSSLGNTAPSQVWWP*WDKPHQ Trigger: CTGGTGGGGCTTGTCCCAGCAAGGCCACCATACCTG...AGATGGAGCTGTGTTACCAAGACTGCTGCTGGCCATGCTCTCATCATCCTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGATGGACCATCTCCCCAGTAACCAACAGAGTACATGGACCTGCCATCCCGGACAACAGCCAACTTaGTCTGGCAGTAGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLMDHLPSNQQSTWTCHPGQQPT*SGSRLP Trigger: AGGCAGCCTACTGCCAGAGCAAGTTGGCTGTTGTCC...GGGATGGCAGGTCCATGTACTCTGTTGGTTACTGGGGAGATGGTCCATCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CCA 90 bp | AGGAATTGGAGAGATCCTGATCCTAGGTCACGCTGGTTTTCTGTGGCAGCAGCTGTATGGTGGCCTTGCTaGGACAAGCCCCACCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RNWRDPDPRSRWFSVAAAVWWPC*DKPHQR Trigger: TCGCTGGTGGGGCTTGTCCCAGCAAGGCCACCATAC...AGCTGCTGCCACAGAAAACCAGCGTGACCTAGGATCAGGATCTCTCCAATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGCCACCACCATGGGCTGGAGACCAAGACTGAATAAAAAGCAGAGGCTTCAGGGTGCAGTGCATTaGCCGTCACACCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRATTMGWRPRLNKKQRLQGAVH*PSHQSL Trigger: AAGGCTCTGGTGTGACGGTCAATGCACTGCACCCTG...AAGCCTCTGCTTTTTATTCAGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAAGGCCAGCCTAGTCTACATAGCAAGTTCCAGGAAGGCCAGGGTTACACCAGCTGGGGACTCTTaGACAGCAGCCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFKASLVYIASSRKARVTPAGDS*TAARRR Trigger: CCTTCTTCTGGCTGCTGTTCAAGAGTCCCCAGCTGG...TGTAACCCTGGCCTTCCTGGAACTTGCTATGTAGACTAGGCTGGCCTTGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR GCA 90 bp | ATAGTGTTCATGAGGGTCTGTGGTCAGAAGCAGCCACATCCATCTGCAAGAAAGGTCACACCAGAGCCTTaGAGCCGGTGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVFMRVCGQKQPHPSARKVTPEP*SRWLSS Trigger: GGAGCTGAGCCACCGGCTGCAAGGCTCTGGTGTGAC...CTTTCTTGCAGATGGATGTGGCTGCTTCTGACCACAGACCCTCATGAACACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACTGGTTCCATGCAAGTTCCATCCACACACAGCCATGATGCGCTGAACGTATGGTGGCCTTGCTaGGACAAGCCCCACCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KRTGSMQVPSTHSHDALNVWWPC*DKPHQR Trigger: TCGCTGGTGGGGCTTGTCCCAGCAAGGCCACCATAC...GTTCAGCGCATCATGGCTGTGTGTGGATGGAACTTGCATGGAACCAGTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTTCATGAGGGTCTGTGGTCAGAAGCAGCCACATCCATCTGCAAGAAAGAGATATGTGCTGGGCTaGGCCGCCAGCTGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: IVFMRVCGQKQPHPSARKRYVLG*AASWGL Trigger: GAGTCCCCAGCTGGCGGCCCAGCCCAGCACATATCT...CTTTCTTGCAGATGGATGTGGCTGCTTCTGACCACAGACCCTCATGAACACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTTAACAGTAGACCAATCAGTCCACCACAGCAGCTTTGGTGTCCACTGTCAGGTATGGTGGCCTTaGTGGGACAAGCCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLTVDQSVHHSSFGVHCQVWWP*WDKPHQ Trigger: CTGGTGGGGCTTGTCCCAGCAAGGCCACCATACCTG...ACAGTGGACACCAAAGCTGCTGTGGTGGACTGATTGGTCTACTGTTAAAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR TCA 90 bp | GAGATTCTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCATGTGCCCAGCAACGTaGGCCAGGGACGAGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EILIVPILPLEDDESMASMCPAT*ARDERL Trigger: CAATCTCTCGTCCCTGGCTCACGTTGCTGGGCACAT...GCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAGAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | CTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCAGCAGTGGCTCAGCTCCTTGGTaGAGAGGACAACAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LIVPILPLEDDESMASSSGSAPW*RGQQPT Trigger: AGTTGGCTGTTGTCCTCTTCACCAAGGAGCTGAGCC...ACTGCTGCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTTCATGAGGGTCTGTGGTCAGAAGCAGCCACATCCATCTGCAAGAAAGCCAGCTGGGGACTCTTaGACAGCAGCCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IVFMRVCGQKQPHPSARKPAGDS*TAARRR Trigger: CCTTCTTCTGGCTGCTGTTCAAGAGTCCCCAGCTGG...CTTTCTTGCAGATGGATGTGGCTGCTTCTGACCACAGACCCTCATGAACACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTAAGTTGCTTCTGTCAGAAATGCTGTCCCAGCAAGACAAACCTGTGGTCTCTTCCCAGGTATGGTaGCCTTGCTGGGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLKLLLSEMLSQQDKPVVSSQVW*PCWDKP Trigger: GGGCTTGTCCCAGCAAGGCCACCATACCTGGGAAGA...GACCACAGGTTTGTCTTGCTGGGACAGCATTTCTGACAGAAGCAACTTAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGCCAAGTCAGAGAGGAGGCAGGAGTATATAAGGGCCCACAAAAATCTGAGCCTTGCAGCCGGTaGCTCAGCTCCTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NNSQVREEAGVYKGPQKSEPCSR*LSSLVK Trigger: CTTCACCAAGGAGCTGAGCCACCGGCTGCAAGGCTC...AGATTTTTGTGGGCCCTTATATACTCCTGCCTCCTCTCTGACTTGGCTGTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR TCA 90 bp | GAGATTCTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCACTCTCGGATGGACTTaGGGGAAGCCAAGTCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EILIVPILPLEDDESMASTLGWT*GKPSLG Trigger: GCCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGT...GCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAGAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | AACAACAGCCAAGTCAGAGAGGAGGCAGGAGTATATAAGGGCCCACAAAAATCTATGTGCCCAGCAACGTaGGCCAGGGACGAGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: NNSQVREEAGVYKGPQKSMCPAT*ARDERL Trigger: CAATCTCTCGTCCCTGGCTCACGTTGCTGGGCACAT...AGATTTTTGTGGGCCCTTATATACTCCTGCCTCCTCTCTGACTTGGCTGTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CCA 90 bp | GATTTCACTGTTTTGCTTTGCTTTAACAGGATCTTGTATAGCCCAAGCTGGCAGAGATATGTGCTGGGCTaGGCCGCCAGCTGGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: DFTVLLCFNRILYSPSWQRYVLG*AASWGL Trigger: GAGTCCCCAGCTGGCGGCCCAGCCCAGCACATATCT...CTGCCAGCTTGGGCTATACAAGATCCTGTTAAAGCAAAGCAAAACAGTGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CCA 90 bp | GATTTTGGTCATGGTGTTTATCACAGCAACAGAAAGCAAACTAGAACAACAGCCCTCAGTGGTCCAGTGTaGGCACCGCATCACGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFGHGVYHSNRKQTRTTALSGPV*APHHGC Trigger: GCAGCCGTGATGCGGTGCCCACACTGGACCACTGAG...GGCTGTTGTTCTAGTTTGCTTTCTGTTGCTGTGATAAACACCATGACCAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CAA 72 bp | TCAGGAACTCACAAGGAGGGACCAGATTCCCACAGGTaGTCCTCTGACCTCCATCATGAATGCACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGTHKEGPDSHR*SSDLHHECTYK Trigger: CTTGTATGTGCATTCATGATGGAGGTCAGAGGACAACCTGTGGGAATCTGGTCCCTCCTTGTGAGTTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CAA 72 bp | AGACCAAGACTGAATAAAAAGCAGAGGCTTCTGAGGTaGCCACAAAAGCCGGACAACCTGAGTCCAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPRLNKKQRLLR*PQKPDNLSPIP Trigger: GGGGATTGGACTCAGGTTGTCCGGCTTTTGTGGCAACCTCAGAAGCCTCTGCTTTTTATTCAGTCTTGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | GATTTCACTGTTTTGCTTTGCTTTAACAGGATCTTGTATAGCCCAAGCTGGCAGCAGGGTGCAGTGCATTaGCCGTCACACCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DFTVLLCFNRILYSPSWQQGAVH*PSHQSL Trigger: AAGGCTCTGGTGTGACGGTCAATGCACTGCACCCTG...CTGCCAGCTTGGGCTATACAAGATCCTGTTAAAGCAAAGCAAAACAGTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR TCA 90 bp | AAGCTTAAGAGTCTACAGTTAAAATTACACAGGAATTGGAGAGATCCTGATCCTCTCCCAGGGGATCCATaGGCCATGGCCAAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLKSLQLKLHRNWRDPDPLPGDP*AMAKPT Trigger: GGTGGGCTTGGCCATGGCTCATGGATCCCCTGGGAG...AGGATCAGGATCTCTCCAATTCCTGTGTAATTTTAACTGTAGACTCTTAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR GCA 90 bp | CTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCAGCAGTGCTCTGGCAGTAGGCTaGCTTGGTGTCATACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIVPILPLEDDESMASSSALAVG*LGVILF Trigger: AAAAAGTATGACACCAAGGCAGCCTACTGCCAGAGC...ACTGCTGCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| 3UTR CAA 72 bp | GAACGGCCAGCCAGACTAAAACTTCCCTGCCTTAAGTaGCTTCTGTCAGAAATGCTGTCCCAGCAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERPARLKLPCLK*LLSEMLSQQDK Trigger: TTTGTCTTGCTGGGACAGCATTTCTGACAGAAGCAACTTAAGGCAGGGAAGTTTTAGTCTGGCTGGCCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTACAGTTGAGAAGTTTAGTCTACTATTGTCACAGTGGGAAGCATGGCAAGGCTCAGCTCCTTGGTaGAGAGGACAACAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: WLTVEKFSLLLSQWEAWQGSAPW*RGQQPT Trigger: AGTTGGCTGTTGTCCTCTTCACCAAGGAGCTGAGCC...TTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTGTAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CCA 90 bp | CTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCAGCAGTGGCAGTAGGCTGCCTTaGTGTCATACTTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVPILPLEDDESMASSSGSRLP*CHTFSS Trigger: AGATGAAAAAGTATGACACCAAGGCAGCCTACTGCC...ACTGCTGCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| 3UTR CAA 72 bp | CACACCATCCTTAAGGGAGCAGTGACCCTTTGCAGTTaGCAATCAAGAGCTGTCTGGTTCATTTGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTILKGAVTLCS*QSRAVWFIWLS Trigger: TGACAACCAAATGAACCAGACAGCTCTTGATTGCAAACTGCAAAGGGTCACTGCTCCCTTAAGGATGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CAA 72 bp | TGGAGCTGGCTTACAGTTGAGAAGTTTAGTCTACTATaGTCACAGTGGGAAGCATGGCAACACACAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSWLTVEKFSLL*SQWEAWQHTGR Trigger: TCTGCCTGTGTGTTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTGTAAGCCAGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | CCACTACCCCTAACATGTTACTGTAATCAAACAACAAGCTTAAGAGTCTACAGTACTCTCGGATGGACTTaGGGGAAGCCAAGTCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPLTCYCNQTTSLRVYSTLGWT*GKPSLG Trigger: GCCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGT...ACTGTAGACTCTTAAGCTTGTTGTTTGATTACAGTAACATGTTAGGGGTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| 3UTR CAA 72 bp | CTGGTCGTGACAGAGAAAGTTTCGGGGTTGAGTTCATaGCAATGTGAAGATTCACACAGTGAGCATAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVTEKVSGLSS*QCEDSHSEHKE Trigger: CTCCTTATGCTCACTGTGTGAATCTTCACATTGCAATGAACTCAACCCCGAAACTTTCTCTGTCACGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGCCAACATCCACAGTCTTGAGATTCTAATAGTACCAATACTGCCCCTAAATGCCCCAAGTAGTTaGCACCAAACTGCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MAANIHSLEILIVPILPLNAPSS*HQTASQ Trigger: TTGAGATGCAGTTTGGTGTCAACTACTTGGGGCATT...TAGGGGCAGTATTGGTACTATTAGAATCTCAAGACTGTGGATGTTGGCTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR GCA 90 bp | AAGCTTAAGAGTCTACAGTTAAAATTACACAGGAATTGGAGAGATCCTGATCCTGCTCTGGCAGTAGGCTaGCTTGGTGTCATACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLKSLQLKLHRNWRDPDPALAVG*LGVILF Trigger: AAAAAGTATGACACCAAGGCAGCCTACTGCCAGAGC...AGGATCAGGATCTCTCCAATTCCTGTGTAATTTTAACTGTAGACTCTTAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CCA 90 bp | CCACTACCCCTAACATGTTACTGTAATCAAACAACAAGCTTAAGAGTCTACAGTGGCAGTAGGCTGCCTTaGTGTCATACTTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPLTCYCNQTTSLRVYSGSRLP*CHTFSS Trigger: AGATGAAAAAGTATGACACCAAGGCAGCCTACTGCC...ACTGTAGACTCTTAAGCTTGTTGTTTGATTACAGTAACATGTTAGGGGTAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS TCA 90 bp | GTATGGTGGCCTTGCTGGGACAAGCCCCACCAGCGACATAGTCCTTaGGCAGCACGGTGCCGCCGATCACCGTGCCCACTACGGACACCG | + |
|
Preference number: 5 (lower is better) Translates to: VWWPCWDKPHQRHSP*AARCRRSPCPLRTP Trigger: CGGTGTCCGTAGTGGGCACGGTGATCGGCGGCACCGTGCTGCTCAAGGACTATGTCGCTGGTGGGGCTTGTCCCAGCAAGGCCACCATAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 90 bp | TGCATGCCCGTATGTCGCCCCAGCTCTGTCCTGGCCACACCAGGGTaGAGTGCATTGACCGTCACACCAGAGCCTTGCAGCCGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CMPVCRPSSVLATPG*SALTVTPEPCSRWL Trigger: GAGCCACCGGCTGCAAGGCTCTGGTGTGACGGTCAATGCACTGCACCCTGGTGTGGCCAGGACAGAGCTGGGGCGACATACGGGCATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CCA 90 bp | AGTTCTTCTGCCACGGCCAGATATGTGCTGGGCTGGGCCGCCAGCTaGGGACTCTTGAACAGCAGCCAGAAGAAGGGCCCAAGCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSATARYVLGWAAS*GLLNSSQKKGPSMK Trigger: CTTCATGCTTGGGCCCTTCTTCTGGCTGCTGTTCAAGAGTCCCCAGCTGGCGGCCCAGCCCAGCACATATCTGGCCGTGGCAGAAGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 90 bp | GAGCCATGGCCAAGCCCACCAAACGGGCACTTTCCGTCCAAAGTCTaGGGGCTACTTCCTCATCTTCAGCCTCAGGAGATGGAGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EPWPSPPNGHFPSKV*GLLPHLQPQEMEPS Trigger: AGAAGGCTCCATCTCCTGAGGCTGAAGATGAGGAAGTAGCCCGCAGACTTTGGACGGAAAGTGCCCGTTTGGTGGGCTTGGCCATGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS TCA 90 bp | TTCATCTGCCAGTTCAAGTCCTCGAAGTCTATGTGCCCAGCAACGTaGGCCAGGGACGAGAGATTGATGATGCGTGATGGGGCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FICQFKSSKSMCPAT*ARDERLMMRDGAEA Trigger: GGCCTCGGCCCCATCACGCATCATCAATCTCTCGTCCCTGGCTCACGTTGCTGGGCACATAGACTTCGAGGACTTGAACTGGCAGATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 90 bp | TCTGAGTCCATCAAAGTACTTCCCCGAAACATTCTCCAGTTCTTCTaGCACGGCCAGATATGTGCTGGGCTGGGCCGCCAGCTGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SESIKVLPRNILQFF*HGQICAGLGRQLGT Trigger: AGTCCCCAGCTGGCGGCCCAGCCCAGCACATATCTGGCCGTGGCAGAAGAACTGGAGAATGTTTCGGGGAAGTACTTTGATGGACTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 90 bp | TTCAGCACGTACGCGGGGATTCAAGGTCTCTCCTCGAATGTCCTTTaGAGCCACCTCGCACTTCTCCATGTCACGACAGGCCAGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSTYAGIQGLSSNVL*SHLALLHVTTGQND Trigger: GTCATTCTGGCCTGTCGTGACATGGAGAAGTGCGAGGTGGCTGCAAAGGACATTCGAGGAGAGACCTTGAATCCCCGCGTACGTGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCCCTTTCTGAGTCTGGCGAGAGCTTCAGACCCACACCATCCTTAAGGGAGTTCCCGATGCCTGTGTaGGCTCCTGTCACGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: AALSESGESFRPTPSLREFPMPV*APVTIT Trigger: TGTTATCGTGACAGGAGCCAACACAGGCATCGGGAA...CTCCCTTAAGGATGGTGTGGGTCTGAAGCTCTCGCCAGACTCAGAAAGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGCCACCACCATGGGCTGGAGACCAAGACTGAATAAAAAGCAGAGGCTTGCCAGGGACGAGAGATaGATGATGCGTGATGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRATTMGWRPRLNKKQRLARDER*MMRDGA Trigger: GGCCCCATCACGCATCATCAATCTCTCGTCCCTGGC...AAGCCTCTGCTTTTTATTCAGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGCCACCACCATGGGCTGGAGACCAAGACTGAATAAAAAGCAGAGGCTTCCAGGGTGCAGTGCATaGACCGTCACACCAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRATTMGWRPRLNKKQRLPGCSA*TVTPEP Trigger: AGGCTCTGGTGTGACGGTCAATGCACTGCACCCTGG...AAGCCTCTGCTTTTTATTCAGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS GCA 90 bp | CTCAAAGCCATCCTCAGTGGTCCAGTGTGGGCACCGCATCACGGCTaGGTTGTTGACCAGAATGTCTACTCGCTCCTCCTCTTTAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LKAILSGPVWAPHHG*VVDQNVYSLLLFND Trigger: GTCATTAAAGAGGAGGAGCGAGTAGACATTCTGGTCAACAACGCAGCCGTGATGCGGTGCCCACACTGGACCACTGAGGATGGCTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | GACCAGATTCCCACAGGTTGTCCTCTGACCTCCATCATGAATGCACATACAAGGCCAGGGTGCAGTGCATaGACCGTCACACCAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DQIPTGCPLTSIMNAHTRPGCSA*TVTPEP Trigger: AGGCTCTGGTGTGACGGTCAATGCACTGCACCCTGG...CCTTGTATGTGCATTCATGATGGAGGTCAGAGGACAACCTGTGGGAATCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS TCA 90 bp | TATGTGCCCAGCAACGTGAGCCAGGGACGAGAGATTGATGATGCGTaGTGGGGCCGAGGCCTTCAGCTTGTCCAACAGCAAATTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YVPSNVSQGREIDDA*WGRGLQLVQQQICQ Trigger: TTGACAAATTTGCTGTTGGACAAGCTGAAGGCCTCGGCCCCATCACGCATCATCAATCTCTCGTCCCTGGCTCACGTTGCTGGGCACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | AACAACAGCCAAGTCAGAGAGGAGGCAGGAGTATATAAGGGCCCACAAAAATCTCCAGGTATGGTGGCCTaGCTGGGACAAGCCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NNSQVREEAGVYKGPQKSPGMVA*LGQAPP Trigger: TGGTGGGGCTTGTCCCAGCAAGGCCACCATACCTGG...AGATTTTTGTGGGCCCTTATATACTCCTGCCTCCTCTCTGACTTGGCTGTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | GATTCACACAGTGAGCATAAGGAGAGCCACCACCATGGGCTGGAGACCAAGACTTTCCCGATGCCTGTGTaGGCTCCTGTCACGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: DSHSEHKESHHHGLETKTFPMPV*APVTIT Trigger: TGTTATCGTGACAGGAGCCAACACAGGCATCGGGAA...AGTCTTGGTCTCCAGCCCATGGTGGTGGCTCTCCTTATGCTCACTGTGTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTAGAACAACAGCCAAGTCAGAGAGGAGGCAGGAGTATATAAGGGCCCACGCCAGCTGGGGACTCTaGAACAGCAGCCAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTRTTAKSERRQEYIRAHASWGL*NSSQKK Trigger: CTTCTTCTGGCTGCTGTTCAAGAGTCCCCAGCTGGC...GTGGGCCCTTATATACTCCTGCCTCCTCTCTGACTTGGCTGTTGTTCTAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAACATCCACAGTCTTGAGATTCTAATAGTACCAATACTGCCCCTACCAGGTATGGTGGCCTaGCTGGGACAAGCCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: MAANIHSLEILIVPILPLPGMVA*LGQAPP Trigger: TGGTGGGGCTTGTCCCAGCAAGGCCACCATACCTGG...TAGGGGCAGTATTGGTACTATTAGAATCTCAAGACTGTGGATGTTGGCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAAGAGAACTGGTTCCATGCAAGTTCCATCCACACACAGCCATGATGCGAACTCTCGGATGGACTaGAGGGAAGCCAAGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WQKRTGSMQVPSTHSHDANSRMD*REAKSR Trigger: CCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGTT...CGCATCATGGCTGTGTGTGGATGGAACTTGCATGGAACCAGTTCTCTTCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | AGGAATTGGAGAGATCCTGATCCTAGGTCACGCTGGTTTTCTGTGGCAGCAGCTCGCATCACGGCTGCGTaGTTGACCAGAATGTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: RNWRDPDPRSRWFSVAAARITAA*LTRMST Trigger: AGTAGACATTCTGGTCAACAACGCAGCCGTGATGCG...AGCTGCTGCCACAGAAAACCAGCGTGACCTAGGATCAGGATCTCTCCAATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | TGCCTTAAGTTGCTTCTGTCAGAAATGCTGTCCCAGCAAGACAAACCTGTGGTCCAGGCCAGAATGACGTaGCCTCCTCTTTTAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLKLLLSEMLSQQDKPVVQARMT*PPLLAS Trigger: GCTGGCTAAAAGAGGAGGCAACGTCATTCTGGCCTG...GACCACAGGTTTGTCTTGCTGGGACAGCATTTCTGACAGAAGCAACTTAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS TCA 90 bp | GGGCTACTTCCTCATCTTCAGCCTCAGGAGATGGAGCCTTCTCTCTaGGTCCATCAAAGTACTTCCCCGAAACATTCTCCAGTTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLPHLQPQEMEPSL*VHQSTSPKHSPVLL Trigger: CAGAAGAACTGGAGAATGTTTCGGGGAAGTACTTTGATGGACTCAGAGAGAAGGCTCCATCTCCTGAGGCTGAAGATGAGGAAGTAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 90 bp | CTCCTTGGTGAAGAGGACAACAGCCAACTTGCTCTGGCAGTAGGCTaGCTTGGTGTCATACTTTTTCATCTGCCAGTTCAAGTCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGEEDNSQLALAVG*LGVILFHLPVQVLE Trigger: TTCGAGGACTTGAACTGGCAGATGAAAAAGTATGACACCAAGGCAGCCTACTGCCAGAGCAAGTTGGCTGTTGTCCTCTTCACCAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | CTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCAGCAGTCAGCTCCAAAGCAGTTaGTTTCCCGATGCCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LIVPILPLEDDESMASSSQLQSS*FPDACV Trigger: AACACAGGCATCGGGAAACAAACTGCTTTGGAGCTG...ACTGCTGCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | GAGATTCTAATAGTACCAATACTGCCCCTAGAGGATGATGAGAGCATGGCCAGCAACTCTCGGATGGACTaGAGGGAAGCCAAGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EILIVPILPLEDDESMASNSRMD*REAKSR Trigger: CCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGTT...GCTGGCCATGCTCTCATCATCCTCTAGGGGCAGTATTGGTACTATTAGAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACAGTTGAGAAGTTTAGTCTACTATTGTCACAGTGGGAAGCATGGCAACGGTGGCTCAGCTCCTaGGTGAAGAGGACAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WLTVEKFSLLLSQWEAWQRWLSS*VKRTTA Trigger: GGCTGTTGTCCTCTTCACCAAGGAGCTGAGCCACCG...TTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTGTAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACAGTTGAGAAGTTTAGTCTACTATTGTCACAGTGGGAAGCATGGCAAGCCAGCTGGGGACTCTaGAACAGCAGCCAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WLTVEKFSLLLSQWEAWQASWGL*NSSQKK Trigger: CTTCTTCTGGCTGCTGTTCAAGAGTCCCCAGCTGGC...TTGCCATGCTTCCCACTGTGACAATAGTAGACTAAACTTCTCAACTGTAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS-3UTR CAA 90 bp | GATTTCACTGTTTTGCTTTGCTTTAACAGGATCTTGTATAGCCCAAGCTGGCAGCAGGCCAGAATGACGTaGCCTCCTCTTTTAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFTVLLCFNRILYSPSWQQARMT*PPLLAS Trigger: GCTGGCTAAAAGAGGAGGCAACGTCATTCTGGCCTG...CTGCCAGCTTGGGCTATACAAGATCCTGTTAAAGCAAAGCAAAACAGTGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | CCACTACCCCTAACATGTTACTGTAATCAAACAACAAGCTTAAGAGTCTACAGTGCCAGGGACGAGAGATaGATGATGCGTGATGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLPLTCYCNQTTSLRVYSARDER*MMRDGA Trigger: GGCCCCATCACGCATCATCAATCTCTCGTCCCTGGC...ACTGTAGACTCTTAAGCTTGTTGTTTGATTACAGTAACATGTTAGGGGTAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS-3UTR CAA 90 bp | AAGCTTAAGAGTCTACAGTTAAAATTACACAGGAATTGGAGAGATCCTGATCCTCGGTGGCTCAGCTCCTaGGTGAAGAGGACAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLKSLQLKLHRNWRDPDPRWLSS*VKRTTA Trigger: GGCTGTTGTCCTCTTCACCAAGGAGCTGAGCCACCG...AGGATCAGGATCTCTCCAATTCCTGTGTAATTTTAACTGTAGACTCTTAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS TCA 72 bp | CCTTGCTGGGACAAGCCCCACCAGCGACATAGTCCTTaGGCAGCACGGTGCCGCCGATCACCGTGCCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: PCWDKPHQRHSP*AARCRRSPCPL Trigger: TAGTGGGCACGGTGATCGGCGGCACCGTGCTGCTCAAGGACTATGTCGCTGGTGGGGCTTGTCCCAGCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CCA 72 bp | TCCAGTTCTTCTGCCACGGCCAGATATGTGCTGGGCTaGGCCGCCAGCTGGGGACTCTTGAACAGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSATARYVLG*AASWGLLNSSQ Trigger: CTGGCTGCTGTTCAAGAGTCCCCAGCTGGCGGCCCAGCCCAGCACATATCTGGCCGTGGCAGAAGAACTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS TCA 72 bp | CACCAGAGCCTTGCAGCCGGTGGCTCAGCTCCTTGGTaGAGAGGACAACAGCCAACTTGCTCTGGCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: HQSLAAGGSAPW*RGQQPTCSGSR Trigger: CCTACTGCCAGAGCAAGTTGGCTGTTGTCCTCTTCACCAAGGAGCTGAGCCACCGGCTGCAAGGCTCTGGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 72 bp | ATCCTCAGTGGTCCAGTGTGGGCACCGCATCACGGCTaGGTTGTTGACCAGAATGTCTACTCGCTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILSGPVWAPHHG*VVDQNVYSLLL Trigger: GAGGAGGAGCGAGTAGACATTCTGGTCAACAACGCAGCCGTGATGCGGTGCCCACACTGGACCACTGAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS CCA 72 bp | AGTGCATTGACCGTCACACCAGAGCCTTGCAGCCGGTaGCTCAGCTCCTTGGTGAAGAGGACAACAGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SALTVTPEPCSR*LSSLVKRTTAN Trigger: GTTGGCTGTTGTCCTCTTCACCAAGGAGCTGAGCCACCGGCTGCAAGGCTCTGGTGTGACGGTCAATGCACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS TCA 72 bp | AGCAACGTGAGCCAGGGACGAGAGATTGATGATGCGTaGTGGGGCCGAGGCCTTCAGCTTGTCCAACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SNVSQGREIDDA*WGRGLQLVQQQ Trigger: TTGCTGTTGGACAAGCTGAAGGCCTCGGCCCCATCACGCATCATCAATCTCTCGTCCCTGGCTCACGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS GCA 72 bp | TACGCGGGGATTCAAGGTCTCTCCTCGAATGTCCTTTaGAGCCACCTCGCACTTCTCCATGTCACGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: YAGIQGLSSNVL*SHLALLHVTTG Trigger: GCCTGTCGTGACATGGAGAAGTGCGAGGTGGCTGCAAAGGACATTCGAGGAGAGACCTTGAATCCCCGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS GCA 72 bp | CCAAGCCCACCAAACGGGCACTTTCCGTCCAAAGTCTaGGGGCTACTTCCTCATCTTCAGCCTCAGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PSPPNGHFPSKV*GLLPHLQPQEM Trigger: CATCTCCTGAGGCTGAAGATGAGGAAGTAGCCCGCAGACTTTGGACGGAAAGTGCCCGTTTGGTGGGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CAA 72 bp | GTACGCGGGGATTCAAGGTCTCTCCTCGAATGTCCTTaGCAGCCACCTCGCACTTCTCCATGTCACGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRGDSRSLLECP*QPPRTSPCHDR Trigger: CCTGTCGTGACATGGAGAAGTGCGAGGTGGCTGCAAAGGACATTCGAGGAGAGACCTTGAATCCCCGCGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS GCA 72 bp | ATCAAAGTACTTCCCCGAAACATTCTCCAGTTCTTCTaGCACGGCCAGATATGTGCTGGGCTGGGCCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IKVLPRNILQFF*HGQICAGLGRQ Trigger: CTGGCGGCCCAGCCCAGCACATATCTGGCCGTGGCAGAAGAACTGGAGAATGTTTCGGGGAAGTACTTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CAA 72 bp | GTGGTCCAGTGTGGGCACCGCATCACGGCTGCGTTGTaGACCAGAATGTCTACTCGCTCCTCCTCTTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: VVQCGHRITAAL*TRMSTRSSSLM Trigger: CATTAAAGAGGAGGAGCGAGTAGACATTCTGGTCAACAACGCAGCCGTGATGCGGTGCCCACACTGGACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000138798.2 |
||
| CDS CAA 72 bp | TCAGTGGTCCAGTGTGGGCACCGCATCACGGCTGCGTaGTTGACCAGAATGTCTACTCGCTCCTCCTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SVVQCGHRITAA*LTRMSTRSSSL Trigger: TAAAGAGGAGGAGCGAGTAGACATTCTGGTCAACAACGCAGCCGTGATGCGGTGCCCACACTGGACCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS CAA 90 bp | GCAGCCACCTCGCACTTCTCCATGTCACGACAGGCCAGAATGACGTaGCCTCCTCTTTTAGCCAGCTCCAAAGCAGTTTGTTTCCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: AATSHFSMSRQARMT*PPLLASSKAVCFPM Trigger: CATCGGGAAACAAACTGCTTTGGAGCTGGCTAAAAGAGGAGGCAACGTCATTCTGGCCTGTCGTGACATGGAGAAGTGCGAGGTGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS CAA 90 bp | CGCTCCTCCTCTTTAATGACCTTCCTTGCAAACTCTCGGATGGACTaGAGGGAAGCCAAGTCTAGGCGTTCAGCACGTACGCGGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSSLMTFLANSRMD*REAKSRRSARTRGF Trigger: GAATCCCCGCGTACGTGCTGAACGCCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGTTTGCAAGGAAGGTCATTAAAGAGGAGGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000138798.2 |
||
| CDS CAA 90 bp | CCATCCTCAGTGGTCCAGTGTGGGCACCGCATCACGGCTGCGTTGTaGACCAGAATGTCTACTCGCTCCTCCTCTTTAATGACCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSSVVQCGHRITAAL*TRMSTRSSSLMTFL Trigger: AAGGAAGGTCATTAAAGAGGAGGAGCGAGTAGACATTCTGGTCAACAACGCAGCCGTGATGCGGTGCCCACACTGGACCACTGAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS CAA 90 bp | AAGCCATCCTCAGTGGTCCAGTGTGGGCACCGCATCACGGCTGCGTaGTTGACCAGAATGTCTACTCGCTCCTCCTCTTTAATGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KPSSVVQCGHRITAA*LTRMSTRSSSLMTF Trigger: GAAGGTCATTAAAGAGGAGGAGCGAGTAGACATTCTGGTCAACAACGCAGCCGTGATGCGGTGCCCACACTGGACCACTGAGGATGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS TCA 72 bp | CAGTTCAAGTCCTCGAAGTCTATGTGCCCAGCAACGTaGGCCAGGGACGAGAGATTGATGATGCGTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: QFKSSKSMCPAT*ARDERLMMRDG Trigger: CCCATCACGCATCATCAATCTCTCGTCCCTGGCTCACGTTGCTGGGCACATAGACTTCGAGGACTTGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CCA 72 bp | TCTGCGGGCTACTTCCTCATCTTCAGCCTCAGGAGATaGAGCCTTCTCTCTGAGTCCATCAAAGTACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SAGYFLIFSLRR*SLLSESIKVLP Trigger: GGGAAGTACTTTGATGGACTCAGAGAGAAGGCTCCATCTCCTGAGGCTGAAGATGAGGAAGTAGCCCGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CAA 72 bp | GCCAGCTCCAAAGCAGTTTGTTTCCCGATGCCTGTGTaGGCTCCTGTCACGATAACAGTCTTCCCAGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: ASSKAVCFPMPV*APVTITVFPGM Trigger: CATACCTGGGAAGACTGTTATCGTGACAGGAGCCAACACAGGCATCGGGAAACAAACTGCTTTGGAGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS CAA 72 bp | GACGTTGCCTCCTCTTTTAGCCAGCTCCAAAGCAGTTaGTTTCCCGATGCCTGTGTTGGCTCCTGTCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: DVASSFSQLQSS*FPDACVGSCHD Trigger: ATCGTGACAGGAGCCAACACAGGCATCGGGAAACAAACTGCTTTGGAGCTGGCTAAAAGAGGAGGCAACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS CAA 90 bp | CCTCTTTTAGCCAGCTCCAAAGCAGTTTGTTTCCCGATGCCTGTGTaGGCTCCTGTCACGATAACAGTCTTCCCAGGTATGGTGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLLASSKAVCFPMPV*APVTITVFPGMVAL Trigger: CAAGGCCACCATACCTGGGAAGACTGTTATCGTGACAGGAGCCAACACAGGCATCGGGAAACAAACTGCTTTGGAGCTGGCTAAAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS CAA 90 bp | GGCCAGAATGACGTTGCCTCCTCTTTTAGCCAGCTCCAAAGCAGTTaGTTTCCCGATGCCTGTGTTGGCTCCTGTCACGATAACAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQNDVASSFSQLQSS*FPDACVGSCHDNSL Trigger: AAGACTGTTATCGTGACAGGAGCCAACACAGGCATCGGGAAACAAACTGCTTTGGAGCTGGCTAAAAGAGGAGGCAACGTCATTCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 ENSMUST00000138798.2 |
||
| CDS CAA 90 bp | AGAAAATGCCCTTTAATGACCTTCCTTGCAAACTCTCGGATGGACTaGAGGGAAGCCAAGTCTAGGCGTTCAGCACGTACGCGGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: RKCPLMTFLANSRMD*REAKSRRSARTRGF Trigger: GAATCCCCGCGTACGTGCTGAACGCCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGTTTGCAAGGAAGGTCATTAAAGGGCATTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS CAA 72 bp | CCTTTAATGACCTTCCTTGCAAACTCTCGGATGGACTaGAGGGAAGCCAAGTCTAGGCGTTCAGCACGTACG | + |
|
Preference number: 6 (lower is better) Translates to: PLMTFLANSRMD*REAKSRRSART Trigger: CGTACGTGCTGAACGCCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGTTTGCAAGGAAGGTCATTAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||
| CDS TCA 72 bp | CCTCATCTTCAGCCTCAGGAGATGGAGCCTTCTCTCTaGGTCCATCAAAGTACTTCCCCGAAACATTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PHLQPQEMEPSL*VHQSTSPKHSP Trigger: TGGAGAATGTTTCGGGGAAGTACTTTGATGGACTCAGAGAGAAGGCTCCATCTCCTGAGGCTGAAGATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CAA 72 bp | TCTTTAATGACCTTCCTTGCAAACTCTCGGATGGACTaGAGGGAAGCCAAGTCTAGGCGTTCAGCACGTACG | + |
|
Preference number: 6 (lower is better) Translates to: SLMTFLANSRMD*REAKSRRSART Trigger: CGTACGTGCTGAACGCCTAGACTTGGCTTCCCTCAAGTCCATCCGAGAGTTTGCAAGGAAGGTCATTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000138798.2 |
||
| CDS GCA 72 bp | AATGTCTACTCGCTCCTCCTCTTTAATGACCTTCCTTaGAAACTCTCGGATGGACTTGAGGGAAGCCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NVYSLLLFNDLP*KLSDGLEGSQV Trigger: GACTTGGCTTCCCTCAAGTCCATCCGAGAGTTTGCAAGGAAGGTCATTAAAGAGGAGGAGCGAGTAGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000138798.2 |
||
| CDS GCA 72 bp | GAAGAGGACAACAGCCAACTTGCTCTGGCAGTAGGCTaGCTTGGTGTCATACTTTTTCATCTGCCAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: EEDNSQLALAVG*LGVILFHLPVQ Trigger: TTGAACTGGCAGATGAAAAAGTATGACACCAAGGCAGCCTACTGCCAGAGCAAGTTGGCTGTTGTCCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008579.14 ENSMUST00000119485.8 |
||
| CDS CAA 72 bp | AGATTGATGATGCGTGATGGGGCCGAGGCCTTCAGCTaGTCCAACAGCAAATTTGTCAATAGAAAATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLMMRDGAEAFS*SNSKFVNRKCP Trigger: GGGGCATTTTCTATTGACAAATTTGCTGTTGGACAAGCTGAAGGCCTCGGCCCCATCACGCATCATCAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008579.14 |
||
| CDS CAA 72 bp | AGATTGATGATGCGTGATGGGGCCGAGGCCTTCAGCTaGTCCAACAGCAAATTTGTCAATAGAAAATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RLMMRDGAEAFS*SNSKFVNRKCP Trigger: AGGGCATTTTCTATTGACAAATTTGCTGTTGGACAAGCTGAAGGCCTCGGCCCCATCACGCATCATCAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119485.8 |
||