Pregenerated sensors for RCSD1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040723

Ensembl transcript IDs: ENSMUST00000040357.11, ENSMUST00000097474.9, ENSMUST00000193714.2

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	GAGTACAACCCATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTaGGGGGTGGAGGGGATGAATCCTGCCTCTCCTTTGGATGGGATG	+
Preference number: 1 (lower is better) Translates to: EYNPCSEQGRHMVAP*GVEGMNPASPLDGM Trigger: CATCCCATCCAAAGGAGAGGCAGGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCATGGGTTGTACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 90 bp	CATCCACCCTGCATCCTGGGCTGTCTCCAGATGCTCGGTGTATTCTaGTTCTGCAGTGGCTTCATGCACTGCTGCTGCTGCTGTTACTGC	+
Preference number: 1 (lower is better) Translates to: HPPCILGCLQMLGVF*FCSGFMHCCCCCYC Trigger: GCAGTAACAGCAGCAGCAGCAGTGCATGAAGCCACTGCAGAAGCAGAATACACCGAGCATCTGGAGACAGCCCAGGATGCAGGGTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 90 bp	AGTGCAGCACTTGGTCTTGGTTGCTTCAGAAAGGGGAGCAAACATTaGCAGGGGAGGACAGGAAAGCATCTGCCCTGTTGGAACACCCTG	+
Preference number: 1 (lower is better) Translates to: SAALGLGCFRKGSKH*QGRTGKHLPCWNTL Trigger: CAGGGTGTTCCAACAGGGCAGATGCTTTCCTGTCCTCCCCTGGCAATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 90 bp	TGCCTGGTTCTGAAAACCTGTCACTCAAGACACAGACCAGCTTTGTaGATACATCCTGTCCTCAAAGTCTTTGAGACCTTCCTGCCTCGG	+
Preference number: 1 (lower is better) Translates to: CLVLKTCHSRHRPAL*IHPVLKVFETFLPR Trigger: CCGAGGCAGGAAGGTCTCAAAGACTTTGAGGACAGGATGTATGCACAAAGCTGGTCTGTGTCTTGAGTGACAGGTTTTCAGAACCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 90 bp	GGGGAATGGACAAAGGTACCTTTGACATCACCAGGCATGTCCCTGTaGTGTCACAGTGTCACTACATTTCAAAGCTGCTCCCTTCTTGTC	+
Preference number: 1 (lower is better) Translates to: GEWTKVPLTSPGMSL*CHSVTTFQSCSLLV Trigger: GACAAGAAGGGAGCAGCTTTGAAATGTAGTGACACTGTGACACCACAGGGACATGCCTGGTGATGTCAAAGGTACCTTTGTCCATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 90 bp	AACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATaGTTACTGAGAACCAGGCACAGTGATGCATACCCACAATCTAGA	+
Preference number: 1 (lower is better) Translates to: NSCLLSLGEELGVEK*LLRTRHSDAYPQSR Trigger: TCTAGATTGTGGGTATGCATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CCA 90 bp	TTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTaGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTC	+
Preference number: 1 (lower is better) Translates to: FSSARLCGTGKSSCP*SRQEHDFKCFNKYL Trigger: GAGATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR TCA 90 bp	TCATGGTCTCTGCATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCTaGCTTCGTTCAATGATGACCAATGATAATAGAAGTGTAAGCCAA	+
Preference number: 1 (lower is better) Translates to: SWSLHQFPALFEFLS*LRSMMTNDNRSVSQ Trigger: TTGGCTTACACTTCTATTATCATTGGTCATCATTGAACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 90 bp	AGTGTAAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTTGGTCATaGTGTTTCATCACAGCAATAGAAACACTAAGGCACCCATTAACT	+
Preference number: 1 (lower is better) Translates to: SVSQINAFLPKMLWS*CFITAIETLRHPLT Trigger: AGTTAATGGGTGCCTTAGTGTTTCTATTGCTGTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTTACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 90 bp	AATAGAAGTGTAAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTTaGTCATGGTGTTTCATCACAGCAATAGAAACACTAAGGCACCCA	+
Preference number: 1 (lower is better) Translates to: NRSVSQINAFLPKML*SWCFITAIETLRHP Trigger: TGGGTGCCTTAGTGTTTCTATTGCTGTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTTACACTTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 90 bp	CACCAAATTGCTTTAAATATATTTAACTTTGAGTCGTGCGTCAGGTaGCACAAACTCAAGTTGATAAAACTCTACTGTCCTCAGCTCTCA	+
Preference number: 1 (lower is better) Translates to: HQIALNIFNFESCVR*HKLKLIKLYCPQLS Trigger: TGAGAGCTGAGGACAGTAGAGTTTTATCAACTTGAGTTTGTGTCACCTGACGCACGACTCAAAGTTAAATATATTTAAAGCAATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	GATGATGTGGAAGGGCGGAGCCCTCCTTCATGGTCTCTGCATCAGTTTCCTGCCGAGGGGTGGAGGGGATaGATCCTGCCTCTCCTTTGG	+
Preference number: 2 (lower is better) Translates to: DDVEGRSPPSWSLHQFPAEGWRG*ILPLLW Trigger: CCAAAGGAGAGGCAGGATTCATCCCCTCCACCCCTC...GGCAGGAAACTGATGCAGAGACCATGAAGGAGGGCTCCGCCCTTCCACATCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CCA 90 bp	CTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAATCCAGGAGATGTCTCCAGTaGCCCCATCACTGGTACCCT	+
Preference number: 2 (lower is better) Translates to: LRARQAYGGTLRGGGDESRRCLQ*PHHWYP Trigger: AGGGTACCAGTGATGGGGCCACTGGAGACATCTCCT...GGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	TCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCCCCTACCTCTGCCTCCCAAAGGCACAGTGCTGCATaGCTTTGGTCCCAGCACTCA	+
Preference number: 2 (lower is better) Translates to: SVDQAGLELRNPPTSASQRHSAA*LWSQHS Trigger: TGAGTGCTGGGACCAAAGGCATGCAGCACTGTGCCT...TTGGGAGGCAGAGGTAGGGGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CCA 90 bp	ATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAAAGGAGATGTCTCCAGTaGCCCCATCACTGGTACCCT	+
Preference number: 2 (lower is better) Translates to: MLRARQAYGGTLRGGGDERRCLQ*PHHWYP Trigger: AGGGTACCAGTGATGGGGCCACTGGAGACATCTCCT...TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 90 bp	AGAGTACAACCCATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTaGAGGGGTGGAGGGGATGAATCCTGCCTCTCCTTTGGATGGGAT	+
Preference number: 2 (lower is better) Translates to: RVQPMLRARQAYGGT*RGGGDESCLSFGWD Trigger: ATCCCATCCAAAGGAGAGGCAGGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCATGGGTTGTACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	TCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCCCCTACCTCTGCCTCCCAAAGTGGCTTCATGCACTaGTGCTGCTGCTGTTACTGC	+
Preference number: 2 (lower is better) Translates to: SVDQAGLELRNPPTSASQSGFMH*CCCCYC Trigger: GCAGTAACAGCAGCAGCAGCAGTGCATGAAGCCACT...TTGGGAGGCAGAGGTAGGGGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CCA 90 bp	CTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAATCCATTCTGCTTCTGCAGTaGCTTCATGCACTGCTGCTG	+
Preference number: 2 (lower is better) Translates to: LRARQAYGGTLRGGGDESILLLQ*LHALLL Trigger: CAGCAGCAGTGCATGAAGCCACTGCAGAAGCAGAAT...GGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	ATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAACTCCTTTGGATGGGATaGGATGGATCAATCACCTCC	+
Preference number: 2 (lower is better) Translates to: MLRARQAYGGTLRGGGDELLWMG*DGSITS Trigger: GGAGGTGATTGATCCATCTCATCCCATCCAAAGGAG...TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	ACATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCGGGGACCATCCACCCTaGATCCTGGGCTGTCTCCAG	+
Preference number: 2 (lower is better) Translates to: TFLQQEFMEGRVIRGMDIGDHPP*ILGCLQ Trigger: CTGGAGACAGCCCAGGATGCAGGGTGGATGGTCCCC...GATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 90 bp	CCTGCCTCTCCTTTGGATGGGATGAGATGGATCAATCACCTCCCCTaGTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGT	+
Preference number: 2 (lower is better) Translates to: PASPLDGMRWINHLP*FSSARLCGTGKSSC Trigger: ACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAACAAGGGGAGGTGATTGATCCATCTCATCCCATCCAAAGGAGAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	ATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCAGGAGGGGTGGAGGGGATaGATCCTGCCTCTCCTTTGG	+
Preference number: 2 (lower is better) Translates to: ISSAGVHGGEGDQRNGYQEGWRG*ILPLLW Trigger: CCAAAGGAGAGGCAGGATTCATCCCCTCCACCCCTC...CTGATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	GAGGGGAGGGTGATCAGAGGAATGGATATCAGACCGACCCATATTCCTGCAAACTCTGCAGTGGCTTCATaGACTGCTGCTGCTGCTGTT	+
Preference number: 2 (lower is better) Translates to: EGRVIRGMDIRPTHIPANSAVAS*TAAAAV Trigger: AACAGCAGCAGCAGCAGTGCATGAAGCCACTGCAGA...GTTTGCAGGAATATGGGTCGGTCTGATATCCATTCCTCTGATCACCCTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	TCCCAAGTGCTGGGATTAAAGACGTGTGCCATCACTGCCCCGCTCTCTTTCTTTTTCATGCACTGCTGCTaGTGCTGTTACTGCTGCTGT	+
Preference number: 2 (lower is better) Translates to: SQVLGLKTCAITAPLSFFFMHCC*CCYCCC Trigger: ACAGCAGCAGTAACAGCAGCAGCAGCAGTGCATGAA...AAAGAAAGAGAGCGGGGCAGTGATGGCACACGTCTTTAATCCCAGCACTTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	ATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCAGGGCTTCATGCACTGCTaGTGCTGCTGTTACTGCTGC	+
Preference number: 2 (lower is better) Translates to: ISSAGVHGGEGDQRNGYQGFMHC*CCCYCC Trigger: GCAGCAGTAACAGCAGCAGCAGCAGTGCATGAAGCC...CTGATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 90 bp	CCCTGCCTGGTTCTGAAAACCTGTCACTCAAGACACAGACCAGCTTaGTGCATACATCCTGTCCTCAAAGTCTTTGAGACCTTCCTGCCT	+
Preference number: 2 (lower is better) Translates to: PCLVLKTCHSRHRPA*CIHPVLKVFETFLP Trigger: AGGCAGGAAGGTCTCAAAGACTTTGAGGACAGGATGTATGCACAAAGCTGGTCTGTGTCTTGAGTGACAGGTTTTCAGAACCAGGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	CTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTGAGAACCAGGCACAGTGATCATATGGTGGCACCTTaGGGGGTGGAGGGGATGAAT	+
Preference number: 2 (lower is better) Translates to: LGEELGVEKCLLRTRHSDHMVAP*GVEGMN Trigger: ATTCATCCCCTCCACCCCTCAAGGTGCCACCATATG...ATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	ATAGAAGTGCAGCACTTGGTCTTGGTTGCTTCAGAAAGGGGAGCAAACATTGCCTCTGCAGTGGCTTCATaGACTGCTGCTGCTGCTGTT	+
Preference number: 2 (lower is better) Translates to: IEVQHLVLVASERGANIASAVAS*TAAAAV Trigger: AACAGCAGCAGCAGCAGTGCATGAAGCCACTGCAGA...GGCAATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCACTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	AACAAGAGCCTAGTTGGGAGGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAATGCTCGGTGTATTCTaGTTCTGCAGTGGCTTCATG	+
Preference number: 2 (lower is better) Translates to: NKSLVGRLAAGRLGDQQEMLGVF*FCSGFM Trigger: CATGAAGCCACTGCAGAAGCAGAATACACCGAGCAT...TTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	AAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTTGGTCATGGTGTTTCATCACGGGGACCATCCACCCTaGATCCTGGGCTGTCTCCAG	+
Preference number: 2 (lower is better) Translates to: KPNKCFSAQDALVMVFHHGDHPP*ILGCLQ Trigger: CTGGAGACAGCCCAGGATGCAGGGTGGATGGTCCCC...GTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	TCCCAAGTGCTGGGATTAAAGACGTGTGCCATCACTGCCCCGCTCTCTTTCTTTACCGACCCATATTCCTaGAAACCCTGTTTTATCCCC	+
Preference number: 2 (lower is better) Translates to: SQVLGLKTCAITAPLSFFTDPYS*KPCFIP Trigger: GGGGATAAAACAGGGTTTGCAGGAATATGGGTCGGT...AAAGAAAGAGAGCGGGGCAGTGATGGCACACGTCTTTAATCCCAGCACTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	TCCCAAGTGCTGGGATTAAAGACGTGTGCCATCACTGCCCCGCTCTCTTTCTTTCTTTCCTCCCCGAGCTaGTTTTGCTCAGGATGTTTT	+
Preference number: 2 (lower is better) Translates to: SQVLGLKTCAITAPLSFFLSSPS*FCSGCF Trigger: AAAACATCCTGAGCAAAAGCAGCTCGGGGAGGAAAG...AAAGAAAGAGAGCGGGGCAGTGATGGCACACGTCTTTAATCCCAGCACTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	CTGAAAACCTGTCACTCAAGACACAGACCAGCTTTGTGCATACATCCTGTCCTCGAGTCGTGCGTCAGGTaGCACAAACTCAAGTTGATA	+
Preference number: 2 (lower is better) Translates to: LKTCHSRHRPALCIHPVLESCVR*HKLKLI Trigger: TATCAACTTGAGTTTGTGTCACCTGACGCACGACTC...GAGGACAGGATGTATGCACAAAGCTGGTCTGTGTCTTGAGTGACAGGTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	CTGCCCAAGATGCTTTGGTCATGGTGTTTCATCACAGCAATAGAAACACTAAGGAAGGGATTACAGGCGTaGGTCACCAAGCTTAGCTGC	+
Preference number: 2 (lower is better) Translates to: LPKMLWSWCFITAIETLRKGLQA*VTKLSC Trigger: GCAGCTAAGCTTGGTGACTCACGCCTGTAATCCCTT...CCTTAGTGTTTCTATTGCTGTGATGAAACACCATGACCAAAGCATCTTGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	CTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTGAGAACCAGGCACAGTGATGGTGTATTCTGCTTCTaGAGTGGCTTCATGCACTGC	+
Preference number: 2 (lower is better) Translates to: LGEELGVEKCLLRTRHSDGVFCF*SGFMHC Trigger: GCAGTGCATGAAGCCACTGCAGAAGCAGAATACACC...ATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CCA 90 bp	CTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTGAGAACCAGGCACAGTGATATTCTGCTTCTGCAGTaGCTTCATGCACTGCTGCTG	+
Preference number: 2 (lower is better) Translates to: LGEELGVEKCLLRTRHSDILLLQ*LHALLL Trigger: CAGCAGCAGTGCATGAAGCCACTGCAGAAGCAGAAT...ATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CCA 90 bp	AAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTTGGTCATGGTGTTTCATCACAGCAAGGCAGGCATATaGTGGCACCTTGAGGGGTGG	+
Preference number: 2 (lower is better) Translates to: KPNKCFSAQDALVMVFHHSKAGI*WHLEGW Trigger: CCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCT...GTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CAA 90 bp	CCCTGTGGTGTCACAGTGTCACTACATTTCAAAGCTGCTCCCTTCTaGTCTGCTACAACATGCTCAGAATCTTTAGGAGAACAGTCTCCT	+
Preference number: 2 (lower is better) Translates to: PCGVTVSLHFKAAPF*SATTCSESLGEQSP Trigger: AGGAGACTGTTCTCCTAAAGATTCTGAGCATGTTGTAGCAGACAAGAAGGGAGCAGCTTTGAAATGTAGTGACACTGTGACACCACAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	CCTAACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTATGCTGCTGCTGTTACTaGTGCTGTTTCCAAGGAGAT	+
Preference number: 2 (lower is better) Translates to: PNSCLLSLGEELGVEKCLCCCCY*CCFQGD Trigger: ATCTCCTTGGAAACAGCAGCAGTAACAGCAGCAGCA...TAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	CCTAACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTAATGCTCGGTGTATTCTaGTTCTGCAGTGGCTTCATG	+
Preference number: 2 (lower is better) Translates to: PNSCLLSLGEELGVEKCLMLGVF*FCSGFM Trigger: CATGAAGCCACTGCAGAAGCAGAATACACCGAGCAT...TAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	ATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCAGCTTGGAGTTGAGAAATaGTTACTGAGAACCAGGCAC	+
Preference number: 2 (lower is better) Translates to: ISSAGVHGGEGDQRNGYQLGVEK*LLRTRH Trigger: GTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAG...CTGATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CCA 90 bp	CTGCCCAAGATGCTTTGGTCATGGTGTTTCATCACAGCAATAGAAACACTAAGGTGCAGCACTTGGTCTTaGTTGCTTCAGAAAGGGGAG	+
Preference number: 2 (lower is better) Translates to: LPKMLWSWCFITAIETLRCSTWS*LLQKGE Trigger: CTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCA...CCTTAGTGTTTCTATTGCTGTGATGAAACACCATGACCAAAGCATCTTGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CAA 90 bp	AATCCTAATACAGATGGTTGTGAGCCAACATGTGCTTGCTGGCAATaGACTTCAGAACCTCTGGAAGAGCAGCCAATGCTCTTAACTACT	+
Preference number: 2 (lower is better) Translates to: NPNTDGCEPTCACWQ*TSEPLEEQPMLLTT Trigger: AGTAGTTAAGAGCATTGGCTGCTCTTCCAGAGGTTCTGAAGTCAATTGCCAGCAAGCACATGTTGGCTCACAACCATCTGTATTAGGATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	AAAGCAAACAAACAAAACTTCATAGAGAAGCGAAGAGAGACGCTCTCAGAAGGTCTCCTTTGGATGGGATaGGATGGATCAATCACCTCC	+
Preference number: 2 (lower is better) Translates to: KANKQNFIEKRRETLSEGLLWMG*DGSITS Trigger: GGAGGTGATTGATCCATCTCATCCCATCCAAAGGAG...ACCTTCTGAGAGCGTCTCTCTTCGCTTCTCTATGAAGTTTTGTTTGTTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	AAACCTTTAACTCGGATGAGAAATTGTGGTACCACCTGTGACATTGGCTCTTTTGGTGTATTCTGCTTCTaGAGTGGCTTCATGCACTGC	+
Preference number: 2 (lower is better) Translates to: KPLTRMRNCGTTCDIGSFGVFCF*SGFMHC Trigger: GCAGTGCATGAAGCCACTGCAGAAGCAGAATACACC...AAAAGAGCCAATGTCACAGGTGGTACCACAATTTCTCATCCGAGTTAAAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	TTTTATGTATATGAGTATACGGTCACTGTCTTCAGACACACCAGAAGAAGGCATAAGGGGAGCAAACATTaGCAGGGGAGGACAGGAAAG	+
Preference number: 2 (lower is better) Translates to: FYVYEYTVTVFRHTRRRHKGSKH*QGRTGK Trigger: CTTTCCTGTCCTCCCCTGGCAATGTTTGCTCCCCTT...ATGCCTTCTTCTGGTGTGTCTGAAGACAGTGACCGTATACTCATATACATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	AAACCTTTAACTCGGATGAGAAATTGTGGTACCACCTGTGACATTGGCTCTTTTTGCTGCTGCTGTTACTaGTGCTGTTTCCAAGGAGAT	+
Preference number: 2 (lower is better) Translates to: KPLTRMRNCGTTCDIGSFCCCCY*CCFQGD Trigger: ATCTCCTTGGAAACAGCAGCAGTAACAGCAGCAGCA...AAAAGAGCCAATGTCACAGGTGGTACCACAATTTCTCATCCGAGTTAAAGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	GTTCCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTTCATGCACTGCTGCTaGTGCTGTTACTGCTGCTGT	+
Preference number: 2 (lower is better) Translates to: VPVLGAGRNTTLNVLINIFMHCC*CCYCCC Trigger: ACAGCAGCAGTAACAGCAGCAGCAGCAGTGCATGAA...GATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	CATGGTCTCTGCATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCTGACTTCGTTTTGTCTGCTACAACATaGTCAGAATCTTTAGGAGAA	+
Preference number: 2 (lower is better) Translates to: HGLCISFLPCLSFCPDFVLSATT*SESLGE Trigger: TTCTCCTAAAGATTCTGAGCATGTTGTAGCAGACAA...AACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR GCA 90 bp	ATCAACAGGAAGGTCGTGGAGCAGACACCACACCAAATTGCTTTAAATATATTTTGCTGCTGTTACTGCTaGTGTTTCCAAGGAGATGTC	+
Preference number: 2 (lower is better) Translates to: INRKVVEQTPHQIALNIFCCCYC*CFQGDV Trigger: GACATCTCCTTGGAAACAGCAGCAGTAACAGCAGCA...AAATATATTTAAAGCAATTTGGTGTGGTGTCTGCTCCACGACCTTCCTGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR TCA 90 bp	AAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTTGGTCATGGTGTTTCATCACCAGCTCAAAAGTCTGTaGCAACTTAGAAACCACTTT	+
Preference number: 2 (lower is better) Translates to: KPNKCFSAQDALVMVFHHQLKSL*QLRNHF Trigger: AAAGTGGTTTCTAAGTTGTCACAGACTTTTGAGCTG...GTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	ATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAAAGCCTAGTTGGGAGGTaGGCTGCAGGAAGACTTGGG	+
Preference number: 3 (lower is better) Translates to: MLRARQAYGGTLRGGGDESLVGR*AAGRLG Trigger: CCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCT...TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR TCA 72 bp	CCATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTaGGGGGTGGAGGGGATGAATCCTGCCTCTCCTTTG	+
Preference number: 3 (lower is better) Translates to: PCSEQGRHMVAP*GVEGMNPASPL Trigger: CAAAGGAGAGGCAGGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 72 bp	GGGACCATCCACCCTGCATCCTGGGCTGTCTCCAGATaGTCGGTGTATTCTGCTTCTGCAGTGGCTTCATGC	+
Preference number: 3 (lower is better) Translates to: GTIHPASWAVSR*SVYSASAVASC Trigger: GCATGAAGCCACTGCAGAAGCAGAATACACCGAGCATCTGGAGACAGCCCAGGATGCAGGGTGGATGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	ATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAATGGCTGCAGGAAGACTaGGGGATCAACAGGAAGGTC	+
Preference number: 3 (lower is better) Translates to: MLRARQAYGGTLRGGGDEWLQED*GINRKV Trigger: GACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCA...TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	TCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCCCCTACCTCTGCCTCCCAATGGCTGCAGGAAGACTaGGGGATCAACAGGAAGGTC	+
Preference number: 3 (lower is better) Translates to: SVDQAGLELRNPPTSASQWLQED*GINRKV Trigger: GACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCA...TTGGGAGGCAGAGGTAGGGGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 72 bp	TGCATCCTGGGCTGTCTCCAGATGCTCGGTGTATTCTaGTTCTGCAGTGGCTTCATGCACTGCTGCTGCTGC	+
Preference number: 3 (lower is better) Translates to: CILGCLQMLGVF*FCSGFMHCCCC Trigger: GCAGCAGCAGCAGTGCATGAAGCCACTGCAGAAGCAGAATACACCGAGCATCTGGAGACAGCCCAGGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CCA 72 bp	CAAGAGCCTAGTTGGGAGGTTGGCTGCAGGAAGACTTaGGGATCAACAGGAAGGTCGTGGAGCAGACACCAC	+
Preference number: 3 (lower is better) Translates to: QEPSWEVGCRKT*GSTGRSWSRHH Trigger: GTGGTGTCTGCTCCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CCA 72 bp	CATTGCCAGGGGAGGACAGGAAAGCATCTGCCCTGTTaGAACACCCTGCCAAGAGGACTCTTGGGACTGAAG	+
Preference number: 3 (lower is better) Translates to: HCQGRTGKHLPC*NTLPRGLLGLK Trigger: CTTCAGTCCCAAGAGTCCTCTTGGCAGGGTGTTCCAACAGGGCAGATGCTTTCCTGTCCTCCCCTGGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 72 bp	CTGGGCTGTCTCCAGATGCTCGGTGTATTCTGCTTCTaGAGTGGCTTCATGCACTGCTGCTGCTGCTGTTAC	+
Preference number: 3 (lower is better) Translates to: LGCLQMLGVFCF*SGFMHCCCCCY Trigger: GTAACAGCAGCAGCAGCAGTGCATGAAGCCACTGCAGAAGCAGAATACACCGAGCATCTGGAGACAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CCA 72 bp	CAATCACCTCCCCTTGTTCTCATCAGCCAGGCTGTGTaGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGGCA	+
Preference number: 3 (lower is better) Translates to: QSPPLVLISQAV*DREKFLSLEQA Trigger: TGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAACAAGGGGAGGTGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR TCA 72 bp	CCTGTTGGAACACCCTGCCAAGAGGACTCTTGGGACTaGAGAGCCCCCGGGAATAGAGTGGGCTATTTTCAT	+
Preference number: 3 (lower is better) Translates to: PVGTPCQEDSWD*RAPGNRVGYFH Trigger: ATGAAAATAGCCCACTCTATTCCCGGGGGCTCTTCAGTCCCAAGAGTCCTCTTGGCAGGGTGTTCCAACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	GCCAGGAAGAACAAGCCAGTAAAGAGCATCCCTCTGTaGTGCATCAGTTCCTACCAGAGTTCCTGCCCTGGC	+
Preference number: 3 (lower is better) Translates to: ARKNKPVKSIPL*CISSYQSSCPG Trigger: GCCAGGGCAGGAACTCTGGTAGGAACTGATGCATCACAGAGGGATGCTCTTTACTGGCTTGTTCTTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 72 bp	CTTGGTCTTGGTTGCTTCAGAAAGGGGAGCAAACATTaGCAGGGGAGGACAGGAAAGCATCTGCCCTGTTGG	+
Preference number: 3 (lower is better) Translates to: LGLGCFRKGSKH*QGRTGKHLPCW Trigger: CCAACAGGGCAGATGCTTTCCTGTCCTCCCCTGGCAATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	CCACCAAGCAGTCCTGTGAGTGTGGAAACAATCCACTaGGATGCACATATAAAACCGCGTGGTCCTCAGGGG	+
Preference number: 3 (lower is better) Translates to: PPSSPVSVETIH*DAHIKPRGPQG Trigger: CCCCTGAGGACCACGCGGTTTTATATGTGCATCTCAGTGGATTGTTTCCACACTCACAGGACTGCTTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 72 bp	ACACAAGTTCAACAAGAGCCTAGTTGGGAGGTTGGCTaGAGGAAGACTTGGGGATCAACAGGAAGGTCGTGG	+
Preference number: 3 (lower is better) Translates to: TQVQQEPSWEVG*RKTWGSTGRSW Trigger: CCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTGTTGAACTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 72 bp	TATGGTGGCACCTTGAGGGGTGGAGGGGATGAATCCTaGCTCTCCTTTGGATGGGATGAGATGGATCAATCA	+
Preference number: 3 (lower is better) Translates to: YGGTLRGGGDES*LSFGWDEMDQS Trigger: TGATTGATCCATCTCATCCCATCCAAAGGAGAGGCAGGATTCATCCCCTCCACCCCTCAAGGTGCCACCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 72 bp	TTAAAGCCAAATATCATCCCTAGGCACAGTGCTGCATaGCTTTGGTCCCAGCACTCAGAGGCAGAGGCAGAG	+
Preference number: 3 (lower is better) Translates to: LKPNIIPRHSAA*LWSQHSEAEAE Trigger: CTCTGCCTCTGCCTCTGAGTGCTGGGACCAAAGGCATGCAGCACTGTGCCTAGGGATGATATTTGGCTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 72 bp	ATGATGTGGAAGGGCGGAGCCCTCCTTCATGGTCTCTaGATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCT	+
Preference number: 3 (lower is better) Translates to: MMWKGGALLHGL*ISFLPCLSFCP Trigger: AGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACCATGAAGGAGGGCTCCGCCCTTCCACATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 72 bp	GGGATGAATCCTGCCTCTCCTTTGGATGGGATGAGATaGATCAATCACCTCCCCTTGTTCTCATCAGCCAGG	+
Preference number: 3 (lower is better) Translates to: GMNPASPLDGMR*INHLPLFSSAR Trigger: CCTGGCTGATGAGAACAAGGGGAGGTGATTGATCCATCTCATCCCATCCAAAGGAGAGGCAGGATTCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	ACATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCGCATATGGTGGCACCTaGAGGGGTGGAGGGGATGAA	+
Preference number: 3 (lower is better) Translates to: TFLQQEFMEGRVIRGMDIAYGGT*RGGGDE Trigger: TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGC...GATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	GGTCTCTGCATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCTGACTTCGTTCAAGCATATGGTGGCACCTaGAGGGGTGGAGGGGATGAA	+
Preference number: 3 (lower is better) Translates to: GLCISFLPCLSFCPDFVQAYGGT*RGGGDE Trigger: TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGC...TTGAACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR GCA 72 bp	CCTATCTACCATAGAAGTGCAGCACTTGGTCTTGGTTaGTTCAGAAAGGGGAGCAAACATTGCCAGGGGAGG	+
Preference number: 3 (lower is better) Translates to: PIYHRSAALGLG*FRKGSKHCQGR Trigger: CCTCCCCTGGCAATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCACTTCTATGGTAGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	ATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCAGGAAAAGTTCCTGTCCTaGGAGCAGGCAGGAACACGA	+
Preference number: 3 (lower is better) Translates to: ISSAGVHGGEGDQRNGYQEKFLS*EQAGTR Trigger: TCGTGTTCCTGCCTGCTCCAAGGACAGGAACTTTTC...CTGATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR TCA 72 bp	ACCAGCTTTGTGCATACATCCTGTCCTCAAAGTCTTTaGGACCTTCCTGCCTCGGTCTCCCTAGTAAAGGGA	+
Preference number: 3 (lower is better) Translates to: TSFVHTSCPQSL*DLPASVSLVKG Trigger: TCCCTTTACTAGGGAGACCGAGGCAGGAAGGTCTCAAAGACTTTGAGGACAGGATGTATGCACAAAGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	AGTTCCTACCAGAGTTCCTGCCCTGGCTTCCTTCAGTaGCGGACTGTGAACTGGAAGTGCAAGCTAAACAAA	+
Preference number: 3 (lower is better) Translates to: SSYQSSCPGFLQ*RTVNWKCKLNK Trigger: TTTGTTTAGCTTGCACTTCCAGTTCACAGTCCGTCACTGAAGGAAGCCAGGGCAGGAACTCTGGTAGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	CTTTCACCTATGACTGTGAGAAGTCGTCTTGATTTGTaGTTGATGTGGGAGAGTCCAGTCCACTGTGGGCGG	+
Preference number: 3 (lower is better) Translates to: LSPMTVRSRLDL*LMWESPVHCGR Trigger: CCGCCCACAGTGGACTGGACTCTCCCACATCAATCACAAATCAAGACGACTTCTCACAGTCATAGGTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	CAGATGGTTGTGAGCCAACATGTGCTTGCTGGCAATTaGCTTCAGAACCTCTGGAAGAGCAGCCAATGCTCT	+
Preference number: 3 (lower is better) Translates to: QMVVSQHVLAGN*LQNLWKSSQCS Trigger: AGAGCATTGGCTGCTCTTCCAGAGGTTCTGAAGTCAATTGCCAGCAAGCACATGTTGGCTCACAACCATCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 72 bp	GGCCGTAACTTTACACAAGTTCAACAAGAGCCTAGTTaGGAGGTTGGCTGCAGGAAGACTTGGGGATCAACA	+
Preference number: 3 (lower is better) Translates to: GRNFTQVQQEPS*EVGCRKTWGST Trigger: TGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTGTTGAACTTGTGTAAAGTTACGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	CTGAAAACCTGTCACTCAAGACACAGACCAGCTTTGTGCATACATCCTGTCCTCAGCACTTGGTCTTGGTaGCTTCAGAAAGGGGAGCAA	+
Preference number: 3 (lower is better) Translates to: LKTCHSRHRPALCIHPVLSTWSW*LQKGEQ Trigger: TTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCT...GAGGACAGGATGTATGCACAAAGCTGGTCTGTGTCTTGAGTGACAGGTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	GATGAAAACAGGCTGGAGACCCTAACTCATGCCTCCTaGGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCT	+
Preference number: 3 (lower is better) Translates to: DENRLETLTHAS*VWEKNLELRNA Trigger: AGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGGGTCTCCAGCCTGTTTTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 72 bp	CTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATaGTTACTGAGAACCAGGCACAGTGATGCATACCCA	+
Preference number: 3 (lower is better) Translates to: LLSLGEELGVEK*LLRTRHSDAYP Trigger: TGGGTATGCATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CCA 72 bp	GCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTaGAGCAGGCAGGAACACGACTTTAAATGTTTTAAT	+
Preference number: 3 (lower is better) Translates to: ARLCGTGKSSCP*SRQEHDFKCFN Trigger: ATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CCA 72 bp	ACAAAGGTACCTTTGACATCACCAGGCATGTCCCTGTaGTGTCACAGTGTCACTACATTTCAAAGCTGCTCC	+
Preference number: 3 (lower is better) Translates to: TKVPLTSPGMSL*CHSVTTFQSCS Trigger: GGAGCAGCTTTGAAATGTAGTGACACTGTGACACCACAGGGACATGCCTGGTGATGTCAAAGGTACCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 72 bp	CCTAATACAGATGGTTGTGAGCCAACATGTGCTTGCTaGCAATTGACTTCAGAACCTCTGGAAGAGCAGCCA	+
Preference number: 3 (lower is better) Translates to: PNTDGCEPTCAC*QLTSEPLEEQP Trigger: TGGCTGCTCTTCCAGAGGTTCTGAAGTCAATTGCCAGCAAGCACATGTTGGCTCACAACCATCTGTATTAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	ATAGAAGTGCAGCACTTGGTCTTGGTTGCTTCAGAAAGGGGAGCAAACATTGCCAAAGCTGCTCCCTTCTaGTCTGCTACAACATGCTCA	+
Preference number: 3 (lower is better) Translates to: IEVQHLVLVASERGANIAKAAPF*SATTCS Trigger: TGAGCATGTTGTAGCAGACAAGAAGGGAGCAGCTTT...GGCAATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCACTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	GTTCCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCAGCCTAGTTGGGAGGTaGGCTGCAGGAAGACTTGGG	+
Preference number: 3 (lower is better) Translates to: VPVLGAGRNTTLNVLINISLVGR*AAGRLG Trigger: CCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCT...GATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR TCA 72 bp	GTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTaGGAACCAGGCACAGTGATGCATACCCACAATCTA	+
Preference number: 3 (lower is better) Translates to: VWEKNLELRNAY*EPGTVMHTHNL Trigger: TAGATTGTGGGTATGCATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR TCA 72 bp	ATGCAGTATGGAATTCAAGCTGAACTTGAAAGGCCATaGAAGCATGCCCTACTCTTCAACTCATCGCTACGG	+
Preference number: 3 (lower is better) Translates to: MQYGIQAELERP*KHALLFNSSLR Trigger: CCGTAGCGATGAGTTGAAGAGTAGGGCATGCTTTCATGGCCTTTCAAGTTCAGCTTGAATTCCATACTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	TCCTTCATGGTCTCTGCATCAGTTTCCTGCCCTGTTTaGGTTTCTGTCCTGACTTCGTTCAATGATGACCAA	+
Preference number: 3 (lower is better) Translates to: SFMVSASVSCPV*VSVLTSFNDDQ Trigger: TTGGTCATCATTGAACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACCATGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR-3UTR CAA 90 bp	TTTCAAAGCTGCTCCCTTCTTGTCTGCTACAACATGCTCAGAATCTTTAGGAGAGTCTGGGAGAAGAACTaGGAGTTGAGAAATGCTTAC	+
Preference number: 3 (lower is better) Translates to: FQSCSLLVCYNMLRIFRRVWEKN*ELRNAY Trigger: GTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGAC...TCTCCTAAAGATTCTGAGCATGTTGTAGCAGACAAGAAGGGAGCAGCTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	AATAAATATCTCTTTGAGTTTTTGAAACTGGTCAGCTaGTTCCCATCTGGAGCAAGCAGAACGGTCGTCGTG	+
Preference number: 3 (lower is better) Translates to: NKYLFEFLKLVS*FPSGASRTVVV Trigger: CACGACGACCGTTCTGCTTGCTCCAGATGGGAATCAGCTGACCAGTTTCAAAAACTCAAAGAGATATTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR GCA 72 bp	AGTGTCACTACATTTCAAAGCTGCTCCCTTCTTGTCTaGTACAACATGCTCAGAATCTTTAGGAGAACAGTC	+
Preference number: 3 (lower is better) Translates to: SVTTFQSCSLLV*YNMLRIFRRTV Trigger: GACTGTTCTCCTAAAGATTCTGAGCATGTTGTAGCAGACAAGAAGGGAGCAGCTTTGAAATGTAGTGACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR TCA 72 bp	AAATCCAAACAAAATAAGATCTTCCCTGCCTGGTTCTaGAAACCTGTCACTCAAGACACAGACCAGCTTTGT	+
Preference number: 3 (lower is better) Translates to: KSKQNKIFPAWF*KPVTQDTDQLC Trigger: ACAAAGCTGGTCTGTGTCTTGAGTGACAGGTTTTCAGAACCAGGCAGGGAAGATCTTATTTTGTTTGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CCA 72 bp	GTAAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTTaGTCATGGTGTTTCATCACAGCAATAGAAACACTA	+
Preference number: 3 (lower is better) Translates to: VSQINAFLPKML*SWCFITAIETL Trigger: TAGTGTTTCTATTGCTGTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAATCCAAGCGCCCAGCCAGCTaGGCCACTGAAGGCTGCGCT	+
Preference number: 4 (lower is better) Translates to: LRARQAYGGTLRGGGDESKRPAS*ATEGCA Trigger: AGCGCAGCCTTCAGTGGCCCAGCTGGCTGGGCGCTT...GGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGGCAGGAACGGCCCAGCTCTACCTTaGGGGGAAACAGGGGGAGGG	+
Preference number: 4 (lower is better) Translates to: QPGCVGQGKVPVLGAGRNGPALP*GETGGG Trigger: CCCTCCCCCTGTTTCCCCCCAAGGTAGAGCTGGGCC...GTTCCTGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR TCA 90 bp	GGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAGGTCGTGGAGCAGACACCATCCCCACAGTCCGACTaGGACCTTCGGAATCGCCGC	+
Preference number: 4 (lower is better) Translates to: GWLQEDLGINRKVVEQTPSPQSD*DLRNRR Trigger: GCGGCGATTCCGAAGGTCTCAGTCGGACTGTGGGGA...TGGTGTCTGCTCCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	GTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGCTGGCCACAGCTGCATaGTCCCGAAAGCGCCCAGCC	+
Preference number: 4 (lower is better) Translates to: VLISQAVWDREKFLSLEQLATAA*SRKRPA Trigger: GGCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAG...CTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GCTGCTGCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACCCTGGGCTACAGCTTaGCTCCAGAGGCGCCTCCTC	+
Preference number: 4 (lower is better) Translates to: AAAVTAAVSKEMSPVAPSPWATA*LQRRLL Trigger: GAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGG...TGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	GATGATGTGGAAGGGCGGAGCCCTCCTTCATGGTCTCTGCATCAGTTTCCTGCCCTGGCACCGTTTTCCTaGGATGGCTCCACAGCCCTG	+
Preference number: 4 (lower is better) Translates to: DDVEGRSPPSWSLHQFPALAPFS*DGSTAL Trigger: CAGGGCTGTGGAGCCATCTCAGGAAAACGGTGCCAG...GGCAGGAAACTGATGCAGAGACCATGAAGGAGGGCTCCGCCCTTCCACATCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GATGATGTGGAAGGGCGGAGCCCTCCTTCATGGTCTCTGCATCAGTTTCCTGCCCCCATTCTCAGCCTCTaGGCTGCCGGTTTGCGATGG	+
Preference number: 4 (lower is better) Translates to: DDVEGRSPPSWSLHQFPAPILSL*AAGLRW Trigger: CCATCGCAAACCGGCAGCCCAGAGGCTGAGAATGGG...GGCAGGAAACTGATGCAGAGACCATGAAGGAGGGCTCCGCCCTTCCACATCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	GTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGTCCGGGACTTTTGGGTaGAGCCCCAGGCAGAAGAGC	+
Preference number: 4 (lower is better) Translates to: VLISQAVWDREKFLSLEQSGTFG*SPRQKS Trigger: GCTCTTCTGCCTGGGGCTTCACCCAAAAGTCCCGGA...CTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	GCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTATCTCAGCCTCTGGGCTaGCGGTTTGCGATGGCGCCT	+
Preference number: 4 (lower is better) Translates to: AVTAAVSKEMSPVAPSLVSQPLG*RFAMAP Trigger: AGGCGCCATCGCAAACCGGCAGCCCAGAGGCTGAGA...TACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGAGCATGGTCAGCCCCTaGGCTACAGCTTGGCTCCAG	+
Preference number: 4 (lower is better) Translates to: VLISQAVWDREKFLSLEQSMVSP*ATAWLQ Trigger: CTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCT...CTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	CCCATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTaGAGGGGTGGAGGGGATGAATCCTGCCTCTCCTTT	+
Preference number: 4 (lower is better) Translates to: PMLRARQAYGGT*RGGGDESCLSF Trigger: AAAGGAGAGGCAGGATTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	GGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAGGTCGTGGAGCAGACACCAGTGATACGATGGCCTTaGGTCCGGGACTTTTGGGTG	+
Preference number: 4 (lower is better) Translates to: GWLQEDLGINRKVVEQTPVIRWP*VRDFWV Trigger: CACCCAAAAGTCCCGGACTCAAGGCCATCGTATCAC...TGGTGTCTGCTCCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	GCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTACTGGCACCGTTTTCCTaGGATGGCTCCACAGCCCTG	+
Preference number: 4 (lower is better) Translates to: AVTAAVSKEMSPVAPSLVLAPFS*DGSTAL Trigger: CAGGGCTGTGGAGCCATCTCAGGAAAACGGTGCCAG...TACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTAATCTCTCCCGCAGCATaGTCAGCCCCTGGGCTACAG	+
Preference number: 4 (lower is better) Translates to: AVTAAVSKEMSPVAPSLVISPAA*SAPGLQ Trigger: CTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGAT...TACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTACATCTCTCCCGCAGCATaGTCAGCCCCTGGGCTACAG	+
Preference number: 4 (lower is better) Translates to: LLLLLFPRRCLQWPHHWYISPAA*SAPGLQ Trigger: CTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGAT...GTACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	GGTCTCTGCATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCTGACTTCGTTCAACTGGCCACAGCTGCATaGTCCCGAAAGCGCCCAGCC	+
Preference number: 4 (lower is better) Translates to: GLCISFLPCLSFCPDFVQLATAA*SRKRPA Trigger: GGCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAG...TTGAACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	CAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGGCAGGAACCCTCTGGCTTCTCTGTaGTGTTACACGTGTTCCTTC	+
Preference number: 4 (lower is better) Translates to: QPGCVGQGKVPVLGAGRNPLASL*CYTCSF Trigger: GAAGGAACACGTGTAACAGCACAGAGAAGCCAGAGG...GTTCCTGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	GATGATGTGGAAGGGCGGAGCCCTCCTTCATGGTCTCTGCATCAGTTTCCTGCCTTCCCAGTGTCTGTATaGTCTCCCGGGGTTGTCTCT	+
Preference number: 4 (lower is better) Translates to: DDVEGRSPPSWSLHQFPAFPVSV*SPGVVS Trigger: AGAGACAACCCCGGGAGAGCATACAGACACTGGGAA...GGCAGGAAACTGATGCAGAGACCATGAAGGAGGGCTCCGCCCTTCCACATCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	GGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAGGTCGTGGAGCAGACACCAGAGCCTATCTTCATCTaGTACCCTCTCCTCAGAGGC	+
Preference number: 4 (lower is better) Translates to: GWLQEDLGINRKVVEQTPEPIFI*YPLLRG Trigger: GCCTCTGAGGAGAGGGTAGCAGATGAAGATAGGCTC...TGGTGTCTGCTCCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGGCAGGAACACCGTTTTCCTGAGATaGCTCCACAGCCCTGTAATC	+
Preference number: 4 (lower is better) Translates to: QPGCVGQGKVPVLGAGRNTVFLR*LHSPVI Trigger: GATTACAGGGCTGTGGAGCCATCTCAGGAAAACGGT...GTTCCTGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAGGTCGTGGAGCAGACACCATCCAGAAGAGGTTTGTaGGGCTTTCTCCCTGACCAC	+
Preference number: 4 (lower is better) Translates to: GWLQEDLGINRKVVEQTPSRRGL*GFLPDH Trigger: GTGGTCAGGGAGAAAGCCCCACAAACCTCTTCTGGA...TGGTGTCTGCTCCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	TCCCAAGTGCTGGGATTAAAGACGTGTGCCATCACTGCCCCGCTCTCTTTCTTTAGCATGGTCAGCCCCTaGGCTACAGCTTGGCTCCAG	+
Preference number: 4 (lower is better) Translates to: SQVLGLKTCAITAPLSFFSMVSP*ATAWLQ Trigger: CTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCT...AAAGAAAGAGAGCGGGGCAGTGATGGCACACGTCTTTAATCCCAGCACTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	TGCTGCTGCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCTTCTTGTTGGCTTACTaGCTGGTGTCTCCCTGGCCA	+
Preference number: 4 (lower is better) Translates to: CCCCYCCCFQGDVSSGPIFLLAY*LVSPWP Trigger: TGGCCAGGGAGACACCAGCCAGTAAGCCAACAAGAA...GATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGCAGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CCA 90 bp	GTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGCCCCATTCTCTTCCCTaGCACCGTTTTCCTGAGATG	+
Preference number: 4 (lower is better) Translates to: VLISQAVWDREKFLSLEQPHSLP*HRFPEM Trigger: CATCTCAGGAAAACGGTGCCAGGGAAGAGAATGGGG...CTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTACATGGTGATTTCTCCCTaGCCACAGCTGCATGCTCCC	+
Preference number: 4 (lower is better) Translates to: LLLLLFPRRCLQWPHHWYMVISP*PQLHAP Trigger: GGGAGCATGCAGCTGTGGCCAGGGAGAAATCACCAT...GTACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	CAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGGCAGGAACGTCATCCATGGAGACTaGTTTCTCATTCTGGATCTC	+
Preference number: 4 (lower is better) Translates to: QPGCVGQGKVPVLGAGRNVIHGD*FLILDL Trigger: GAGATCCAGAATGAGAAAGCAGTCTCCATGGATGAC...GTTCCTGCCTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTAAGGCTGTCCCTTCAGTaGCCTTCCCAGTGTCTGTAT	+
Preference number: 4 (lower is better) Translates to: AVTAAVSKEMSPVAPSLVRLSLQ*PSQCLY Trigger: ATACAGACACTGGGAAGGCCACTGAAGGGACAGCCT...TACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	CCTTTGGATGGGATGAGATGGATCAATCACCTCCCCTaGTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAA	+
Preference number: 4 (lower is better) Translates to: PLDGMRWINHLP*FSSARLCGTGK Trigger: TTTCCCTGTCCCACACAGCCTGGCTGATGAGAACAAGGGGAGGTGATTGATCCATCTCATCCCATCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	AACAAGAGCCTAGTTGGGAGGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAATTCCCAGTGTCTGTATaGTCTCCCGGGGTTGTCTCT	+
Preference number: 4 (lower is better) Translates to: NKSLVGRLAAGRLGDQQEFPVSV*SPGVVS Trigger: AGAGACAACCCCGGGAGAGCATACAGACACTGGGAA...TTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTGAGAACCAGGCACAGTGATCCCATTCTCAGCCTCTaGGCTGCCGGTTTGCGATGG	+
Preference number: 4 (lower is better) Translates to: LGEELGVEKCLLRTRHSDPILSL*AAGLRW Trigger: CCATCGCAAACCGGCAGCCCAGAGGCTGAGAATGGG...ATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTACTGGTTTCCTTCTTGTTaGCTTACTGGCTGGTGTCTC	+
Preference number: 4 (lower is better) Translates to: LLLLLFPRRCLQWPHHWYWFPSC*LTGWCL Trigger: GAGACACCAGCCAGTAAGCCAACAAGAAGGAAACCA...GTACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CCA 90 bp	GTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGTGGGGATGTCATCCATaGAGACTGCTTTCTCATTCT	+
Preference number: 4 (lower is better) Translates to: VLISQAVWDREKFLSLEQWGCHP*RLLSHS Trigger: AGAATGAGAAAGCAGTCTCCATGGATGACATCCCCA...CTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	GACCAGCTTTGTGCATACATCCTGTCCTCAAAGTCTTaGAGACCTTCCTGCCTCGGTCTCCCTAGTAAAGGG	+
Preference number: 4 (lower is better) Translates to: DQLCAYILSSKS*RPSCLGLPSKG Trigger: CCCTTTACTAGGGAGACCGAGGCAGGAAGGTCTCAAAGACTTTGAGGACAGGATGTATGCACAAAGCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	CCTAACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTATCTGGATCTCACTGGTaGTCTCTCCCGCAGCATGGT	+
Preference number: 4 (lower is better) Translates to: PNSCLLSLGEELGVEKCLSGSHW*SLPQHG Trigger: ACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGA...TAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	TCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCCCCTACCTCTGCCTCCCAAGATAGTAGTACCTTCTaGTTTTCCAGAAGAGGTTTG	+
Preference number: 4 (lower is better) Translates to: SVDQAGLELRNPPTSASQDSSTF*FSRRGL Trigger: CAAACCTCTTCTGGAAAAGCAGAAGGTACTACTATC...TTGGGAGGCAGAGGTAGGGGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CATGGTCTCTGCATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCTGACTTCGTTCCCCATTCTCTTCCCTaGCACCGTTTTCCTGAGATG	+
Preference number: 4 (lower is better) Translates to: HGLCISFLPCLSFCPDFVPHSLP*HRFPEM Trigger: CATCTCAGGAAAACGGTGCCAGGGAAGAGAATGGGG...AACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CCTAACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACGTGTTCCTTCTCCGTaGCTTTTCTGCAGACCACGG	+
Preference number: 4 (lower is better) Translates to: PNSCLLSLGEELGVEKCLRVPSP*LFCRPR Trigger: CCGTGGTCTGCAGAAAAGCCACGGAGAAGGAACACG...TAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	ATCAACAGGAAGGTCGTGGAGCAGACACCACACCAAATTGCTTTAAATATATTTCCCTGGGCTACAGCTTaGCTCCAGAGGCGCCTCCTC	+
Preference number: 4 (lower is better) Translates to: INRKVVEQTPHQIALNIFPWATA*LQRRLL Trigger: GAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGG...AAATATATTTAAAGCAATTTGGTGTGGTGTCTGCTCCACGACCTTCCTGTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	TCCTCCCTATCTACCATAGAAGTGCAGCACTTGGTCTaGGTTGCTTCAGAAAGGGGAGCAAACATTGCCAGG	+
Preference number: 4 (lower is better) Translates to: SSLSTIEVQHLV*VASERGANIAR Trigger: CCTGGCAATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCACTTCTATGGTAGATAGGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CAA 72 bp	ACAGATGGTTGTGAGCCAACATGTGCTTGCTGGCAATaGACTTCAGAACCTCTGGAAGAGCAGCCAATGCTC	+
Preference number: 4 (lower is better) Translates to: TDGCEPTCACWQ*TSEPLEEQPML Trigger: GAGCATTGGCTGCTCTTCCAGAGGTTCTGAAGTCAATTGCCAGCAAGCACATGTTGGCTCACAACCATCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	CCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTCTTCTCAGCCTCTGGGCTaGCGGTTTGCGATGGCGCCT	+
Preference number: 4 (lower is better) Translates to: PVLGAGRNTTLNVLINISSQPLG*RFAMAP Trigger: AGGCGCCATCGCAAACCGGCAGCCCAGAGGCTGAGA...AGAGATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	CTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTGAGAACCAGGCACAGTGATGAGCCTATCTTCATCTaGTACCCTCTCCTCAGAGGC	+
Preference number: 4 (lower is better) Translates to: LGEELGVEKCLLRTRHSDEPIFI*YPLLRG Trigger: GCCTCTGAGGAGAGGGTAGCAGATGAAGATAGGCTC...ATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CCTAACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTAAGGCTGTCCCTTCAGTaGCCTTCCCAGTGTCTGTAT	+
Preference number: 4 (lower is better) Translates to: PNSCLLSLGEELGVEKCLRLSLQ*PSQCLY Trigger: ATACAGACACTGGGAAGGCCACTGAAGGGACAGCCT...TAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	GTGGAGTCCTCCCTATCTACCATAGAAGTGCAGCACTaGGTCTTGGTTGCTTCAGAAAGGGGAGCAAACATT	+
Preference number: 4 (lower is better) Translates to: VESSLSTIEVQH*VLVASERGANI Trigger: AATGTTTGCTCCCCTTTCTGAAGCAACCAAGACCAAGTGCTGCACTTCTATGGTAGATAGGGAGGACTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	TTTTATGTATATGAGTATACGGTCACTGTCTTCAGACACACCAGAAGAAGGCATTCCGGGACTTTTGGGTaGAGCCCCAGGCAGAAGAGC	+
Preference number: 4 (lower is better) Translates to: FYVYEYTVTVFRHTRRRHSGTFG*SPRQKS Trigger: GCTCTTCTGCCTGGGGCTTCACCCAAAAGTCCCGGA...ATGCCTTCTTCTGGTGTGTCTGAAGACAGTGACCGTATACTCATATACATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	AAAGCAAACAAACAAAACTTCATAGAGAAGCGAAGAGAGACGCTCTCAGAAGGTCACAGGCACCTCTTCTaGCTCACTTGGGTGGGATCG	+
Preference number: 4 (lower is better) Translates to: KANKQNFIEKRRETLSEGHRHLF*LTWVGS Trigger: CGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTGTG...ACCTTCTGAGAGCGTCTCTCTTCGCTTCTCTATGAAGTTTTGTTTGTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	AAAGCAAACAAACAAAACTTCATAGAGAAGCGAAGAGAGACGCTCTCAGAAGGTTGTTGGCTTACTGGCTaGTGTCTCCCTGGCCACAGC	+
Preference number: 4 (lower is better) Translates to: KANKQNFIEKRRETLSEGCWLTG*CLPGHS Trigger: GCTGTGGCCAGGGAGACACCAGCCAGTAAGCCAACA...ACCTTCTGAGAGCGTCTCTCTTCGCTTCTCTATGAAGTTTTGTTTGTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR GCA 90 bp	TTTTATGTATATGAGTATACGGTCACTGTCTTCAGACACACCAGAAGAAGGCATCACAGGCACCTCTTCTaGCTCACTTGGGTGGGATCG	+
Preference number: 4 (lower is better) Translates to: FYVYEYTVTVFRHTRRRHHRHLF*LTWVGS Trigger: CGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTGTG...ATGCCTTCTTCTGGTGTGTCTGAAGACAGTGACCGTATACTCATATACATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CATGGTCTCTGCATCAGTTTCCTGCCCTGTTTGAGTTTCTGTCCTGACTTCGTTTGTCAACATTGGAGTTaGTCTCTGAGGGTCTTTCCT	+
Preference number: 4 (lower is better) Translates to: HGLCISFLPCLSFCPDFVCQHWS*SLRVFP Trigger: AGGAAAGACCCTCAGAGACCAACTCCAATGTTGACA...AACGAAGTCAGGACAGAAACTCAAACAGGGCAGGAAACTGATGCAGAGACCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	AAACCTTTAACTCGGATGAGAAATTGTGGTACCACCTGTGACATTGGCTCTTTTCGTGTTCCTTCTCCGTaGCTTTTCTGCAGACCACGG	+
Preference number: 4 (lower is better) Translates to: KPLTRMRNCGTTCDIGSFRVPSP*LFCRPR Trigger: CCGTGGTCTGCAGAAAAGCCACGGAGAAGGAACACG...AAAAGAGCCAATGTCACAGGTGGTACCACAATTTCTCATCCGAGTTAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	CCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTCTTCTGGATCTCACTGGTaGTCTCTCCCGCAGCATGGT	+
Preference number: 4 (lower is better) Translates to: PVLGAGRNTTLNVLINISSGSHW*SLPQHG Trigger: ACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGA...AGAGATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CCTAACTCATGCCTCCTGAGTCTGGGAGAAGAACTTGGAGTTGAGAAATGCTTATGTCAACATTGGAGTTaGTCTCTGAGGGTCTTTCCT	+
Preference number: 4 (lower is better) Translates to: PNSCLLSLGEELGVEKCLCQHWS*SLRVFP Trigger: AGGAAAGACCCTCAGAGACCAACTCCAATGTTGACA...TAAGCATTTCTCAACTCCAAGTTCTTCTCCCAGACTCAGGAGGCATGAGTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	ACATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCACTGCTTTCTCATTCTaGATCTCACTGGTGATCTCT	+
Preference number: 4 (lower is better) Translates to: TFLQQEFMEGRVIRGMDITAFSF*ISLVIS Trigger: AGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGT...GATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	GTTCTGAAAACCTGTCACTCAAGACACAGACCAGCTTaGTGCATACATCCTGTCCTCAAAGTCTTTGAGACC	+
Preference number: 4 (lower is better) Translates to: VLKTCHSRHRPA*CIHPVLKVFET Trigger: GGTCTCAAAGACTTTGAGGACAGGATGTATGCACAAAGCTGGTCTGTGTCTTGAGTGACAGGTTTTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR TCA 90 bp	CACAGAGCTACTGAATTCAGAATAAGAACCAACCCGGAAGATTCATCATTTATTGTGATACGATGGCCTTaGGTCCGGGACTTTTGGGTG	+
Preference number: 4 (lower is better) Translates to: HRATEFRIRTNPEDSSFIVIRWP*VRDFWV Trigger: CACCCAAAAGTCCCGGACTCAAGGCCATCGTATCAC...AATAAATGATGAATCTTCCGGGTTGGTTCTTATTCTGAATTCAGTAGCTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	ACATTTCTTCAGCAGGAGTTCATGGAGGGGAGGGTGATCAGAGGAATGGATATCGATAGTAGTACCTTCTaGTTTTCCAGAAGAGGTTTG	+
Preference number: 4 (lower is better) Translates to: TFLQQEFMEGRVIRGMDIDSSTF*FSRRGL Trigger: CAAACCTCTTCTGGAAAAGCAGAAGGTACTACTATC...GATATCCATTCCTCTGATCACCCTCCCCTCCATGAACTCCTGCTGAAGAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	CCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTCTGGGGAGGGAGCAAGGTaGTTTCCTTCTTGTTGGCTT	+
Preference number: 4 (lower is better) Translates to: PVLGAGRNTTLNVLINISGEGAR*FPSCWL Trigger: AAGCCAACAAGAAGGAAACCACCTTGCTCCCTCCCC...AGAGATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CCA 90 bp	ATCAACAGGAAGGTCGTGGAGCAGACACCACACCAAATTGCTTTAAATATATTTCTGAGCTGTCAACATTaGAGTTGGTCTCTGAGGGTC	+
Preference number: 4 (lower is better) Translates to: INRKVVEQTPHQIALNIFLSCQH*SWSLRV Trigger: GACCCTCAGAGACCAACTCCAATGTTGACAGCTCAG...AAATATATTTAAAGCAATTTGGTGTGGTGTCTGCTCCACGACCTTCCTGTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GTTCCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCCTGAGCTGTCAACATTaGAGTTGGTCTCTGAGGGTC	+
Preference number: 4 (lower is better) Translates to: VPVLGAGRNTTLNVLINILSCQH*SWSLRV Trigger: GACCCTCAGAGACCAACTCCAATGTTGACAGCTCAG...GATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GTTCCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCACCGTTTTCCTGAGATaGCTCCACAGCCCTGTAATC	+
Preference number: 4 (lower is better) Translates to: VPVLGAGRNTTLNVLINITVFLR*LHSPVI Trigger: GATTACAGGGCTGTGGAGCCATCTCAGGAAAACGGT...GATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	GTCACAGTGTCACTACATTTCAAAGCTGCTCCCTTCTaGTCTGCTACAACATGCTCAGAATCTTTAGGAGAA	+
Preference number: 4 (lower is better) Translates to: VTVSLHFKAAPF*SATTCSESLGE Trigger: TTCTCCTAAAGATTCTGAGCATGTTGTAGCAGACAAGAAGGGAGCAGCTTTGAAATGTAGTGACACTGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR GCA 90 bp	CCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTCTGTCATCCATGGAGACTaGTTTCTCATTCTGGATCTC	+
Preference number: 4 (lower is better) Translates to: PVLGAGRNTTLNVLINISVIHGD*FLILDL Trigger: GAGATCCAGAATGAGAAAGCAGTCTCCATGGATGAC...AGAGATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	TTTTATGTATATGAGTATACGGTCACTGTCTTCAGACACACCAGAAGAAGGCATTGGGGATGTCATCCATaGAGACTGCTTTCTCATTCT	+
Preference number: 4 (lower is better) Translates to: FYVYEYTVTVFRHTRRRHWGCHP*RLLSHS Trigger: AGAATGAGAAAGCAGTCTCCATGGATGACATCCCCA...ATGCCTTCTTCTGGTGTGTCTGAAGACAGTGACCGTATACTCATATACATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CCA 90 bp	GTTCCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCACTGCTTTCTCATTCTaGATCTCACTGGTGATCTCT	+
Preference number: 4 (lower is better) Translates to: VPVLGAGRNTTLNVLINITAFSF*ISLVIS Trigger: AGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGT...GATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
3UTR CAA 72 bp	TGTAAGCCAAATAAATGCTTTTCTGCCCAAGATGCTTaGGTCATGGTGTTTCATCACAGCAATAGAAACACT	+
Preference number: 4 (lower is better) Translates to: CKPNKCFSAQDA*VMVFHHSNRNT Trigger: AGTGTTTCTATTGCTGTGATGAAACACCATGACCAAAGCATCTTGGGCAGAAAAGCATTTATTTGGCTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
3UTR CAA 72 bp	AATTCAAAGCTTATAATGTGTATGACATTGTCAGTCTaGACCAGCTCAAAAGTCTGTGACAACTTAGAAACC	+
Preference number: 4 (lower is better) Translates to: NSKLIMCMTLSV*TSSKVCDNLET Trigger: GGTTTCTAAGTTGTCACAGACTTTTGAGCTGGTCAAGACTGACAATGTCATACACATTATAAGCTTTGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS GCA 90 bp	GGGTGGCTGGCGCCGGATGGTGATTTCTCCCTGGCCACAGCTGCATaGTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAAGGCTGCGCT	+
Preference number: 5 (lower is better) Translates to: GWLAPDGDFSLATAA*SRKRPASWATEGCA Trigger: AGCGCAGCCTTCAGTGGCCCAGCTGGCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAGGGAGAAATCACCATCCGGCGCCAGCCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS CCA 90 bp	CGGGGTTGTCTCTTCCCGTGGGCTTCCGCACCCATTCTCAGCCTCTaGGCTGCCGGTTTGCGATGGCGCCTGGACCTCTGGATGACCCTG	+
Preference number: 5 (lower is better) Translates to: RGCLFPWASAPILSL*AAGLRWRLDLWMTL Trigger: CAGGGTCATCCAGAGGTCCAGGCGCCATCGCAAACCGGCAGCCCAGAGGCTGAGAATGGGTGCGGAAGCCCACGGGAAGAGACAACCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 90 bp	CTTCTTGTTGGCTTACTGGCTGGTGTCTCCCTGGCCACAGCTGCATaGTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAAGGCTGCGCT	+
Preference number: 5 (lower is better) Translates to: LLVGLLAGVSLATAA*SRKRPASWATEGCA Trigger: AGCGCAGCCTTCAGTGGCCCAGCTGGCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAGGGAGACACCAGCCAGTAAGCCAACAAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS GCA 90 bp	GTGAGTTCCTTCCGGGGGCTGGTCAAAGCTCACAGGCACCTCTTCTaGCTCACTTGGGTGGGATCGGATGCCGGGGCTACTGGGTGTGGA	+
Preference number: 5 (lower is better) Translates to: VSSFRGLVKAHRHLF*LTWVGSDAGATGCG Trigger: TCCACACCCAGTAGCCCCGGCATCCGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTGTGAGCTTTGACCAGCCCCCGGAAGGAACTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 90 bp	CAGGGGGAGGGAGCAAGGTGGTTTCCTTCTTGTTGGCTTACTGGCTaGTGTCTCCCTGGCCACAGCTGCATGCTCCCGAAAGCGCCCAGC	+
Preference number: 5 (lower is better) Translates to: QGEGARWFPSCWLTG*CLPGHSCMLPKAPS Trigger: GCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAGGGAGACACCAGCCAGTAAGCCAACAAGAAGGAAACCACCTTGCTCCCTCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CAA 90 bp	ATGCTCAGAGCAAGGCAGGCATATGGTGGCACCTTGAGGGGTGGAGGGGATGAACCCCTGGGCTACAGCTaGGCTCCAGAGGCGCCTCCT	+
Preference number: 5 (lower is better) Translates to: MLRARQAYGGTLRGGGDEPLGYS*APEAPP Trigger: AGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGG...TTCATCCCCTCCACCCCTCAAGGTGCCACCATATGCCTGCCTTGCTCTGAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 90 bp	GCTGCATGCTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAAGGCTaGGCTGAGCTGTCAACATTGGAGTTGGTCTCTGAGGGTCTTTCC	+
Preference number: 5 (lower is better) Translates to: AACSRKRPASWATEG*AELSTLELVSEGLS Trigger: GGAAAGACCCTCAGAGACCAACTCCAATGTTGACAGCTCAGCGCAGCCTTCAGTGGCCCAGCTGGCTGGGCGCTTTCGGGAGCATGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9 ENSMUST00000193714.2
CDS CCA 90 bp	ACTGCTTTCTCATTCTGGATCTCACTGGTGATCTCTCCCGCAGCATaGTCAGCCCCTGGGCTACAGCTTGGCTCCAGAGGCGCCTCCTCC	+
Preference number: 5 (lower is better) Translates to: TAFSFWISLVISPAA*SAPGLQLGSRGASS Trigger: GGAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 90 bp	CGCCGGATGGTGATTTCTCCTCACCGTTCTGGCCCAGCTCTACCTTaGGGGGAAACAGGGGGAGGGAGCAAGGTGGTTTCCTTCTTGTTG	+
Preference number: 5 (lower is better) Translates to: RRMVISPHRSGPALP*GETGGGSKVVSFLL Trigger: CAACAAGAAGGAAACCACCTTGCTCCCTCCCCCTGTTTCCCCCCAAGGTAGAGCTGGGCCAGAACGGTGAGGAGAAATCACCATCCGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CAA 90 bp	GAGACGGTTGGTGTAGCCTACGGGGGACCATCCACCCTGCATCCTGGGCTGTCTCCTCCTCAGGCATATTaGCGTCTGGGCTTTTCTGTC	+
Preference number: 5 (lower is better) Translates to: ETVGVAYGGPSTLHPGLSPPQAY*RLGFSV Trigger: GACAGAAAAGCCCAGACGCAAATATGCCTGAGGAGG...AGACAGCCCAGGATGCAGGGTGGATGGTCCCCCGTAGGCTACACCAACCGTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 90 bp	CAAAGCTCACAGGCACCTCTTCTGCCTCACTTGGGTGGGATCGGATaGCGGGGCTACTGGGTGTGGAAGGGGGACTGTGAAATGGTGATA	+
Preference number: 5 (lower is better) Translates to: QSSQAPLLPHLGGIG*RGYWVWKGDCEMVI Trigger: TATCACCATTTCACAGTCCCCCTTCCACACCCAGTAGCCCCGGCATCCGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTGTGAGCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 90 bp	TGGCTTCTCTGTGCTGTTACACGTGTTCCTTCTCCGTGGCTTTTCTaGAGACCACGGAGTTCCCTCCACCCCGTCTGCCATAGCCTCCTG	+
Preference number: 5 (lower is better) Translates to: WLLCAVTRVPSPWLF*RPRSSLHPVCHSLL Trigger: CAGGAGGCTATGGCAGACGGGGTGGAGGGAACTCCGTGGTCTGCAGAAAAGCCACGGAGAAGGAACACGTGTAACAGCACAGAGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 90 bp	ATTCTGGATCTCACTGGTGATCTCTCCCGCAGCATGGTCAGCCCCTaGGCTACAGCTTGGCTCCAGAGGCGCCTCCTCCTTTTGCTTTGT	+
Preference number: 5 (lower is better) Translates to: ILDLTGDLSRSMVSP*ATAWLQRRLLLLLC Trigger: ACAAAGCAAAAGGAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	GTTCTCATCAGCCAGGCTGTGTGGGACAGGGAAAAGTTCCTGTCCTTGGAGCAGTTGAGTCCGGGACTTTaGGGTGAAGCCCCAGGCAGA	+
Preference number: 5 (lower is better) Translates to: VLISQAVWDREKFLSLEQLSPGL*GEAPGR Trigger: TCTGCCTGGGGCTTCACCCAAAAGTCCCGGACTCAA...CTGCTCCAAGGACAGGAACTTTTCCCTGTCCCACACAGCCTGGCTGATGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS TCA 90 bp	GGATGTCATCCATGGAGACTGCTTTCTCATTCTGGATCTCACTGGTaGTCTCTCCCGCAGCATGGTCAGCCCCTGGGCTACAGCTTGGCT	+
Preference number: 5 (lower is better) Translates to: GCHPWRLLSHSGSHW*SLPQHGQPLGYSLA Trigger: AGCCAAGCTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGTCTCCATGGATGACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 90 bp	GGCTTTCTCCCTGACCACTCCCTCCTCCTCAGGCATATTTGCGTCTaGGCTTTTCTGTCCGAGCCTATCTTCATCTGCTACCCTCTCCTC	+
Preference number: 5 (lower is better) Translates to: GFLPDHSLLLRHICV*AFLSEPIFICYPLL Trigger: GAGGAGAGGGTAGCAGATGAAGATAGGCTCGGACAGAAAAGCCCAGACGCAAATATGCCTGAGGAGGAGGGAGTGGTCAGGGAGAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 90 bp	GTATCCTCGATGGGGATGTCATCCATGGAGACTGCTTTCTCATTCTaGATCTCACTGGTGATCTCTCCCGCAGCATGGTCAGCCCCTGGG	+
Preference number: 5 (lower is better) Translates to: VSSMGMSSMETAFSF*ISLVISPAAWSAPG Trigger: CCCAGGGGCTGACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGTCTCCATGGATGACATCCCCATCGAGGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	TCCACCCTGCATCCTGGGCTGTCTCCAGATGCTCGGTGTATTCTGCTTCTGCAGGGTGAGCTCTTCACCTaGATTTTAGGTGGGTGGCTG	+
Preference number: 5 (lower is better) Translates to: STLHPGLSPDARCILLLQGELFT*ILGGWL Trigger: CAGCCACCCACCTAAAATCAAGGTGAAGAGCTCACC...CTGCAGAAGCAGAATACACCGAGCATCTGGAGACAGCCCAGGATGCAGGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	GCTGTTACTGCTGCTGTTTCCAAGGAGATGTCTCCAGTGGCCCCATCACTGGTATTGAGTCCGGGACTTTaGGGTGAAGCCCCAGGCAGA	+
Preference number: 5 (lower is better) Translates to: AVTAAVSKEMSPVAPSLVLSPGL*GEAPGR Trigger: TCTGCCTGGGGCTTCACCCAAAAGTCCCGGACTCAA...TACCAGTGATGGGGCCACTGGAGACATCTCCTTGGAAACAGCAGCAGTAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	AACAAGAGCCTAGTTGGGAGGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAATATGCTCTCCCGGGGTaGTCTCTTCCCGTGGGCTTC	+
Preference number: 5 (lower is better) Translates to: NKSLVGRLAAGRLGDQQEYALPG*SLPVGF Trigger: GAAGCCCACGGGAAGAGACAACCCCGGGAGAGCATA...TTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS TCA 90 bp	CGACTGAGACCTTCGGAATCGCCGCGAGGGAGGACGTCTTTTTATTaGGCCTCTAGTCCGCACCTTATTGTAAGAGGGCAGGTGAGTTCC	+
Preference number: 5 (lower is better) Translates to: RLRPSESPRGRTSFY*ASSPHLIVRGQVSS Trigger: GGAACTCACCTGCCCTCTTACAATAAGGTGCGGACTAGAGGCTCAATAAAAAGACGTCCTCCCTCGCGGCGATTCCGAAGGTCTCAGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	GGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAGGTCGTGGAGCAGACACCAAAGGTGGTTTCCTTCTaGTTGGCTTACTGGCTGGTG	+
Preference number: 5 (lower is better) Translates to: GWLQEDLGINRKVVEQTPKVVSF*LAYWLV Trigger: CACCAGCCAGTAAGCCAACAAGAAGGAAACCACCTT...TGGTGTCTGCTCCACGACCTTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CAA 90 bp	TCCACCCTGCATCCTGGGCTGTCTCCAGATGCTCGGTGTATTCTGCTTCTGCAGTTTTCCAGAAGAGGTTaGTGGGGCTTTCTCCCTGAC	+
Preference number: 5 (lower is better) Translates to: STLHPGLSPDARCILLLQFSRRG*WGFLPD Trigger: GTCAGGGAGAAAGCCCCACAAACCTCTTCTGGAAAA...CTGCAGAAGCAGAATACACCGAGCATCTGGAGACAGCCCAGGATGCAGGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 90 bp	CGGCTCTGCGATAGTAGTACCTTCTGCTTTTCCAGAAGAGGTTTGTaGGGCTTTCTCCCTGACCACTCCCTCCTCCTCAGGCATATTTGC	+
Preference number: 5 (lower is better) Translates to: RLCDSSTFCFSRRGL*GFLPDHSLLLRHIC Trigger: GCAAATATGCCTGAGGAGGAGGGAGTGGTCAGGGAGAAAGCCCCACAAACCTCTTCTGGAAAAGCAGAAGGTACTACTATCGCAGAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	AACAAGAGCCTAGTTGGGAGGTTGGCTGCAGGAAGACTTGGGGATCAACAGGAAGTGGTTTCCTTCTTGTaGGCTTACTGGCTGGTGTCT	+
Preference number: 5 (lower is better) Translates to: NKSLVGRLAAGRLGDQQEVVSFL*AYWLVS Trigger: AGACACCAGCCAGTAAGCCAACAAGAAGGAAACCAC...TTCCTGTTGATCCCCAAGTCTTCCTGCAGCCAACCTCCCAACTAGGCTCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS-3UTR CAA 90 bp	ATCAACAGGAAGGTCGTGGAGCAGACACCACACCAAATTGCTTTAAATATATTTCCCCTGGGCTACAGCTaGGCTCCAGAGGCGCCTCCT	+
Preference number: 5 (lower is better) Translates to: INRKVVEQTPHQIALNIFPLGYS*APEAPP Trigger: AGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGG...AAATATATTTAAAGCAATTTGGTGTGGTGTCTGCTCCACGACCTTCCTGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	TTTTATGTATATGAGTATACGGTCACTGTCTTCAGACACACCAGAAGAAGGCATTATGCTCTCCCGGGGTaGTCTCTTCCCGTGGGCTTC	+
Preference number: 5 (lower is better) Translates to: FYVYEYTVTVFRHTRRRHYALPG*SLPVGF Trigger: GAAGCCCACGGGAAGAGACAACCCCGGGAGAGCATA...ATGCCTTCTTCTGGTGTGTCTGAAGACAGTGACCGTATACTCATATACATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	CTGGGAGAAGAACTTGGAGTTGAGAAATGCTTACTGAGAACCAGGCACAGTGATTTTTCCAGAAGAGGTTaGTGGGGCTTTCTCCCTGAC	+
Preference number: 5 (lower is better) Translates to: LGEELGVEKCLLRTRHSDFSRRG*WGFLPD Trigger: GTCAGGGAGAAAGCCCCACAAACCTCTTCTGGAAAA...ATCACTGTGCCTGGTTCTCAGTAAGCATTTCTCAACTCCAAGTTCTTCTCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	AAACCTTTAACTCGGATGAGAAATTGTGGTACCACCTGTGACATTGGCTCTTTTGCTGAGCTGTCAACATaGGAGTTGGTCTCTGAGGGT	+
Preference number: 5 (lower is better) Translates to: KPLTRMRNCGTTCDIGSFAELST*ELVSEG Trigger: ACCCTCAGAGACCAACTCCAATGTTGACAGCTCAGC...AAAAGAGCCAATGTCACAGGTGGTACCACAATTTCTCATCCGAGTTAAAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	ATCAACAGGAAGGTCGTGGAGCAGACACCACACCAAATTGCTTTAAATATATTTGCTGAGCTGTCAACATaGGAGTTGGTCTCTGAGGGT	+
Preference number: 5 (lower is better) Translates to: INRKVVEQTPHQIALNIFAELST*ELVSEG Trigger: ACCCTCAGAGACCAACTCCAATGTTGACAGCTCAGC...AAATATATTTAAAGCAATTTGGTGTGGTGTCTGCTCCACGACCTTCCTGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS-3UTR CAA 90 bp	CCTGTCCTTGGAGCAGGCAGGAACACGACTTTAAATGTTTTAATAAATATCTCTCCTCCTCAGGCATATTaGCGTCTGGGCTTTTCTGTC	+
Preference number: 5 (lower is better) Translates to: PVLGAGRNTTLNVLINISPPQAY*RLGFSV Trigger: GACAGAAAAGCCCAGACGCAAATATGCCTGAGGAGG...AGAGATATTTATTAAAACATTTAAAGTCGTGTTCCTGCCTGCTCCAAGGACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	CTCTTCCCGTGGGCTTCCGCACCCATTCTCAGCCTCTaGGCTGCCGGTTTGCGATGGCGCCTGGACCTCTGG	+
Preference number: 6 (lower is better) Translates to: LFPWASAPILSL*AAGLRWRLDLW Trigger: CCAGAGGTCCAGGCGCCATCGCAAACCGGCAGCCCAGAGGCTGAGAATGGGTGCGGAAGCCCACGGGAAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	GGCTTACTGGCTGGTGTCTCCCTGGCCACAGCTGCATaGTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAA	+
Preference number: 6 (lower is better) Translates to: GLLAGVSLATAA*SRKRPASWATE Trigger: TTCAGTGGCCCAGCTGGCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAGGGAGACACCAGCCAGTAAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS GCA 72 bp	GCGCCGGATGGTGATTTCTCCCTGGCCACAGCTGCATaGTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAA	+
Preference number: 6 (lower is better) Translates to: APDGDFSLATAA*SRKRPASWATE Trigger: TTCAGTGGCCCAGCTGGCTGGGCGCTTTCGGGAGCATGCAGCTGTGGCCAGGGAGAAATCACCATCCGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS CCA 72 bp	CTCACTGGTGATCTCTCCCGCAGCATGGTCAGCCCCTaGGCTACAGCTTGGCTCCAGAGGCGCCTCCTCCTT	+
Preference number: 6 (lower is better) Translates to: LTGDLSRSMVSP*ATAWLQRRLLL Trigger: AAGGAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGATCACCAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CAA 72 bp	GCTTCCGCACCCATTCTCAGCCTCTGGGCTGCCGGTTaGCGATGGCGCCTGGACCTCTGGATGACCCTGACT	+
Preference number: 6 (lower is better) Translates to: ASAPILSLWAAG*RWRLDLWMTLT Trigger: AGTCAGGGTCATCCAGAGGTCCAGGCGCCATCGCAAACCGGCAGCCCAGAGGCTGAGAATGGGTGCGGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	CAGGCACCTCTTCTGCCTCACTTGGGTGGGATCGGATaGCGGGGCTACTGGGTGTGGAAGGGGGACTGTGAA	+
Preference number: 6 (lower is better) Translates to: QAPLLPHLGGIG*RGYWVWKGDCE Trigger: TTCACAGTCCCCCTTCCACACCCAGTAGCCCCGGCATCCGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	TTCCGGGGGCTGGTCAAAGCTCACAGGCACCTCTTCTaGCTCACTTGGGTGGGATCGGATGCCGGGGCTACT	+
Preference number: 6 (lower is better) Translates to: FRGLVKAHRHLF*LTWVGSDAGAT Trigger: AGTAGCCCCGGCATCCGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTGTGAGCTTTGACCAGCCCCCGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	AGTGTCTGTATGCTCTCCCGGGGTTGTCTCTTCCCGTaGGCTTCCGCACCCATTCTCAGCCTCTGGGCTGCC	+
Preference number: 6 (lower is better) Translates to: SVCMLSRGCLFP*ASAPILSLWAA Trigger: GGCAGCCCAGAGGCTGAGAATGGGTGCGGAAGCCCACGGGAAGAGACAACCCCGGGAGAGCATACAGACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CAA 72 bp	GCTGGTCAAAGCTCACAGGCACCTCTTCTGCCTCACTaGGGTGGGATCGGATGCCGGGGCTACTGGGTGTGG	+
Preference number: 6 (lower is better) Translates to: AGQSSQAPLLPH*GGIGCRGYWVW Trigger: CCACACCCAGTAGCCCCGGCATCCGATCCCACCCAAGTGAGGCAGAAGAGGTGCCTGTGAGCTTTGACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	TCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAAGGCTaGGCTGAGCTGTCAACATTGGAGTTGGTCTCTGAG	+
Preference number: 6 (lower is better) Translates to: SRKRPASWATEG*AELSTLELVSE Trigger: CTCAGAGACCAACTCCAATGTTGACAGCTCAGCGCAGCCTTCAGTGGCCCAGCTGGCTGGGCGCTTTCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9 ENSMUST00000193714.2
CDS CCA 72 bp	CTCTCCCGCAGCATGGTCAGCCCCTGGGCTACAGCTTaGCTCCAGAGGCGCCTCCTCCTTTTGCTTTGTATC	+
Preference number: 6 (lower is better) Translates to: LSRSMVSPWATA*LQRRLLLLLCI Trigger: GATACAAAGCAAAAGGAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS TCA 72 bp	CGGATGCCGGGGCTACTGGGTGTGGAAGGGGGACTGTaGAATGGTGATACGATGGCCTTGAGTCCGGGACTT	+
Preference number: 6 (lower is better) Translates to: RMPGLLGVEGGL*NGDTMALSPGL Trigger: AAGTCCCGGACTCAAGGCCATCGTATCACCATTTCACAGTCCCCCTTCCACACCCAGTAGCCCCGGCATCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	GTGATTTCTCCTCACCGTTCTGGCCCAGCTCTACCTTaGGGGGAAACAGGGGGAGGGAGCAAGGTGGTTTCC	+
Preference number: 6 (lower is better) Translates to: VISPHRSGPALP*GETGGGSKVVS Trigger: GGAAACCACCTTGCTCCCTCCCCCTGTTTCCCCCCAAGGTAGAGCTGGGCCAGAACGGTGAGGAGAAATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS CCA 72 bp	CACTTGGGTGGGATCGGATGCCGGGGCTACTGGGTGTaGAAGGGGGACTGTGAAATGGTGATACGATGGCCT	+
Preference number: 6 (lower is better) Translates to: HLGGIGCRGYWV*KGDCEMVIRWP Trigger: AGGCCATCGTATCACCATTTCACAGTCCCCCTTCCACACCCAGTAGCCCCGGCATCCGATCCCACCCAAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	CTGCCTCACTTGGGTGGGATCGGATGCCGGGGCTACTaGGTGTGGAAGGGGGACTGTGAAATGGTGATACGA	+
Preference number: 6 (lower is better) Translates to: LPHLGGIGCRGY*VWKGDCEMVIR Trigger: TCGTATCACCATTTCACAGTCCCCCTTCCACACCCAGTAGCCCCGGCATCCGATCCCACCCAAGTGAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CAA 72 bp	TCTCTCCCGCAGCATGGTCAGCCCCTGGGCTACAGCTaGGCTCCAGAGGCGCCTCCTCCTTTTGCTTTGTAT	+
Preference number: 6 (lower is better) Translates to: SLPQHGQPLGYS*APEAPPPFALY Trigger: ATACAAAGCAAAAGGAGGAGGCGCCTCTGGAGCCAAGCTGTAGCCCAGGGGCTGACCATGCTGCGGGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS TCA 72 bp	CACCTTGATTTTAGGTGGGTGGCTGGCGCCGGATGGTaGTTTCTCCCTGGCCACAGCTGCATGCTCCCGAAA	+
Preference number: 6 (lower is better) Translates to: HLDFRWVAGAGW*FLPGHSCMLPK Trigger: TTTCGGGAGCATGCAGCTGTGGCCAGGGAGAAATCACCATCCGGCGCCAGCCACCCACCTAAAATCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097474.9
CDS CCA 72 bp	CCCCAGGCAGAAGAGCTGCCGGGTCAAAGGCTAAGTTaGCCTGAAGCTTCTCGATCAGGGGTGAGCTCTTCA	+
Preference number: 6 (lower is better) Translates to: PQAEELPGQRLS*PEASRSGVSSS Trigger: TGAAGAGCTCACCCCTGATCGAGAAGCTTCAGGCCAACTTAGCCTTTGACCCGGCAGCTCTTCTGCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS TCA 72 bp	CACCTTGATTTTAGGTGGGTGGCTGGCGCCGGATGGTaGTTTCTCCTCACCGTTCTGGCCCAGCTCTACCTT	+
Preference number: 6 (lower is better) Translates to: HLDFRWVAGAGW*FLLTVLAQLYL Trigger: AAGGTAGAGCTGGGCCAGAACGGTGAGGAGAAATCACCATCCGGCGCCAGCCACCCACCTAAAATCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS TCA 72 bp	CCATGGAGACTGCTTTCTCATTCTGGATCTCACTGGTaGTCTCTCCCGCAGCATGGTCAGCCCCTGGGCTAC	+
Preference number: 6 (lower is better) Translates to: PWRLLSHSGSHW*SLPQHGQPLGY Trigger: GTAGCCCAGGGGCTGACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGTCTCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	TGTGCTGTTACACGTGTTCCTTCTCCGTGGCTTTTCTaGAGACCACGGAGTTCCCTCCACCCCGTCTGCCAT	+
Preference number: 6 (lower is better) Translates to: CAVTRVPSPWLF*RPRSSLHPVCH Trigger: ATGGCAGACGGGGTGGAGGGAACTCCGTGGTCTGCAGAAAAGCCACGGAGAAGGAACACGTGTAACAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	GGAGCAAGGTGGTTTCCTTCTTGTTGGCTTACTGGCTaGTGTCTCCCTGGCCACAGCTGCATGCTCCCGAAA	+
Preference number: 6 (lower is better) Translates to: GARWFPSCWLTG*CLPGHSCMLPK Trigger: TTTCGGGAGCATGCAGCTGTGGCCAGGGAGACACCAGCCAGTAAGCCAACAAGAAGGAAACCACCTTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040357.11
CDS CCA 72 bp	TGGCTTCTCTGTGCTGTTACACGTGTTCCTTCTCCGTaGCTTTTCTGCAGACCACGGAGTTCCCTCCACCCC	+
Preference number: 6 (lower is better) Translates to: WLLCAVTRVPSP*LFCRPRSSLHP Trigger: GGGGTGGAGGGAACTCCGTGGTCTGCAGAAAAGCCACGGAGAAGGAACACGTGTAACAGCACAGAGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	ATTCTGTCCAACCTTCTCTCCAGCATTCGCCTCCTCTaGGGTCCTGACCAGCTCCTCTGGCTTCTCTGTGCT	+
Preference number: 6 (lower is better) Translates to: ILSNLLSSIRLL*GPDQLLWLLCA Trigger: AGCACAGAGAAGCCAGAGGAGCTGGTCAGGACCCCAGAGGAGGCGAATGCTGGAGAGAAGGTTGGACAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	CGCCTGGACCTCTGGATGACCCTGACTAGCTGTGTCTaGATTCTGTCCAACCTTCTCTCCAGCATTCGCCTC	+
Preference number: 6 (lower is better) Translates to: RLDLWMTLTSCV*ILSNLLSSIRL Trigger: GAGGCGAATGCTGGAGAGAAGGTTGGACAGAATCCAGACACAGCTAGTCAGGGTCATCCAGAGGTCCAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS TCA 72 bp	CCTTCGGAATCGCCGCGAGGGAGGACGTCTTTTTATTaGGCCTCTAGTCCGCACCTTATTGTAAGAGGGCAG	+
Preference number: 6 (lower is better) Translates to: PSESPRGRTSFY*ASSPHLIVRGQ Trigger: CTGCCCTCTTACAATAAGGTGCGGACTAGAGGCTCAATAAAAAGACGTCCTCCCTCGCGGCGATTCCGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	TTTCTCCCTGACCACTCCCTCCTCCTCAGGCATATTTaGGTCTGGGCTTTTCTGTCCGAGCCTATCTTCATC	+
Preference number: 6 (lower is better) Translates to: FLPDHSLLLRHI*VWAFLSEPIFI Trigger: GATGAAGATAGGCTCGGACAGAAAAGCCCAGACGCAAATATGCCTGAGGAGGAGGGAGTGGTCAGGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CAA 90 bp	ATCCGGCTCTGCGATAGTAGTACCTTCTGCTTTTCCAGAAGAGGTTaGTGGGGCTTTCTCCCTGACCACTCCCTCCTCCTCAGGCATATT	+
Preference number: 6 (lower is better) Translates to: IRLCDSSTFCFSRRG*WGFLPDHSLLLRHI Trigger: AATATGCCTGAGGAGGAGGGAGTGGTCAGGGAGAAAGCCCCACAAACCTCTTCTGGAAAAGCAGAAGGTACTACTATCGCAGAGCCGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS GCA 72 bp	TCGGGTATCCTCGATGGGGATGTCATCCATGGAGACTaGTTTCTCATTCTGGATCTCACTGGTGATCTCTCC	+
Preference number: 6 (lower is better) Translates to: SGILDGDVIHGD*FLILDLTGDLS Trigger: GGAGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGTCTCCATGGATGACATCCCCATCGAGGATACCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9
CDS CCA 72 bp	ATGGGGATGTCATCCATGGAGACTGCTTTCTCATTCTaGATCTCACTGGTGATCTCTCCCGCAGCATGGTCA	+
Preference number: 6 (lower is better) Translates to: MGMSSMETAFSF*ISLVISPAAWS Trigger: TGACCATGCTGCGGGAGAGATCACCAGTGAGATCCAGAATGAGAAAGCAGTCTCCATGGATGACATCCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040357.11 ENSMUST00000097474.9

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu