Pregenerated sensors for RCOR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037395Ensembl transcript IDs: ENSMUST00000073279.13, ENSMUST00000110849.10, ENSMUST00000192128.6, ENSMUST00000192158.6, ENSMUST00000192222.6, ENSMUST00000192491.6, ENSMUST00000192866.6, ENSMUST00000193144.2, ENSMUST00000194750.6
Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAGTGGAGGAGGTTGTCGGTGAAGAGCAGGGGCGGCAGGCAGTGTTaGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGAC | + |
Preference number: 1 (lower is better) Translates to: EWRRLSVKSRGGRQC*TKKWWRLVQSGNGD Trigger: GTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTTCACCGACAACCTCCTCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR GCA 90 bp | GCTCCATGTCCAGTTGCCTCAGGATGGTGTTGGCTGCGTTGGGGCTaGAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACATGCCCT | + |
Preference number: 1 (lower is better) Translates to: APCPVASGWCWLRWG*RRQPPRPPGLDTCP Trigger: AGGGCATGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 90 bp | TCGGTGAAGAGCAGGGGCGGCAGGCAGTGTTGGACGAAGAAGTGGTaGAGGCTGGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGAGT | + |
Preference number: 1 (lower is better) Translates to: SVKSRGGRQCWTKKW*RLVQSGNGDCWCWS Trigger: ACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTTCACCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CCA 90 bp | TTGTCGGTGAAGAGCAGGGGCGGCAGGCAGTGTTGGACGAAGAAGTaGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGG | + |
Preference number: 1 (lower is better) Translates to: LSVKSRGGRQCWTKK*WRLVQSGNGDCWCW Trigger: CCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTTCACCGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CCA 90 bp | GGTGCTGCAGACTCTGGTACTCTCTCCGGCCCAGGCCGATCTTGCTaGTTTGGACCGGCTGGTCAGCGTTACCCTCTCTTTTGGCTTCTT | + |
Preference number: 1 (lower is better) Translates to: GAADSGTLSGPGRSC*FGPAGQRYPLFWLL Trigger: AAGAAGCCAAAAGAGAGGGTAACGCTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGGGCCGGAGAGAGTACCAGAGTCTGCAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 90 bp | AGAGCAGGGGCGGCAGGCAGTGTTGGACGAAGAAGTGGTGGAGGCTaGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGAGTGGATGAT | + |
Preference number: 1 (lower is better) Translates to: RAGAAGSVGRRSGGG*FRVAMGTVGVGVDD Trigger: ATCATCCACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CCA 90 bp | AGATCAGCTCCATGTCCAGTTGCCTCAGGATGGTGTTGGCTGCGTTaGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACA | + |
Preference number: 1 (lower is better) Translates to: RSAPCPVASGWCWLR*GCRRQPPRPPGLDT Trigger: TGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR TCA 90 bp | AGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAATaGGTGAAGGTGGCTGCTGACCGCCAACCGTGGTCAACACTGGTC | + |
Preference number: 1 (lower is better) Translates to: SVISAVKAVNLSESQ*VKVAADRQPWSTLV Trigger: GACCAGTGTTGACCACGGTTGGCGGTCAGCAGCCACCTTCACTCATTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CCA 90 bp | AAACCCCTTGGTAGACAGAATACTTTTCTTCCCATGAGATCACAGTaGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCAC | + |
Preference number: 1 (lower is better) Translates to: KPLGRQNTFLPMRSQ*ALERRPNRGLLLCH Trigger: GTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGTATTCTGTCTACCAAGGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR CCA 90 bp | GAGCTTCTTCTACGTCATCATCACTGTCACCCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGCGATCCATCAAACTTGTCCTTGAGC | + |
Preference number: 1 (lower is better) Translates to: ELLLRHHHCHPDCVY*LVYEPGDPSNLSLS Trigger: GCTCAAGGACAAGTTTGATGGATCGCCAGGCTCGTAAACTAGCCAATAGACACAATCAGGGTGACAGTGATGATGACGTAGAAGAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 90 bp | TTTTGGCTTCTTTCTTTGGGTCGTAGTCACTGTCGTTTCCATCCATaGGGTGAGCTTCTTCTACGTCATCATCACTGTCACCCTGATTGT | + |
Preference number: 1 (lower is better) Translates to: FWLLSLGRSHCRFHP*GELLLRHHHCHPDC Trigger: ACAATCAGGGTGACAGTGATGATGACGTAGAAGAAGCTCACCCCATGGATGGAAACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 90 bp | TTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTaGCATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAA | + |
Preference number: 1 (lower is better) Translates to: LTVEIIHFRSARTRS*HVLMTKQSETPHEE Trigger: TTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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3UTR TCA 90 bp | CTTTTGCAATGGCGATATATTCATCCACTGTATGTTTCCTATATCTaGTGTGCCGCAAAGGATTCGGGTCCGCTACATCACACTGAAGTC | + |
Preference number: 1 (lower is better) Translates to: LLQWRYIHPLYVSYI*CAAKDSGPLHHTEV Trigger: GACTTCAGTGTGATGTAGCGGACCCGAATCCTTTGCGGCACATCAGATATAGGAAACATACAGTGGATGAATATATCGCCATTGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 90 bp | TGTGATGCCGATGACTTAGCCCTAAATCAAACCACAAGCTCAGGTTaGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGAT | + |
Preference number: 1 (lower is better) Translates to: CDADDLALNQTTSSG*LKGSYKCIQMFNRD Trigger: ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAGGGCTAAGTCATCGGCATCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCTTGGCCGGGGCTGGATaGACCGAGCCTGCTGCTGGA | + |
Preference number: 2 (lower is better) Translates to: GGQTEASCCVTPLTLVHRLAGAG*TEPAAG Trigger: TCCAGCAGCAGGCTCGGTTCATCCAGCCCCGGCCAA...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | TGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACAAGAGGTGGAGGAGGCTaGTTGAGAGTTGGCCGGGGC | + |
Preference number: 2 (lower is better) Translates to: WLRWGCRRQPPRPPGLDTRGGGG*LRVGRG Trigger: GCCCCGGCCAACTCTCAATCAGCCTCCTCCACCTCT...TGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | TGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACAAGAGTTGGCCGGGGCTaGATGAACCGAGCCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: WLRWGCRRQPPRPPGLDTRVGRG*MNRACC Trigger: GCAGCAGGCTCGGTTCATCCAGCCCCGGCCAACTCT...TGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CAA 90 bp | GGAGTGGAGGAGGTTGTCGGTGAAGAGCAGGGGCGGCAGGCAGTGTaGGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGA | + |
Preference number: 2 (lower is better) Translates to: GVEEVVGEEQGRQAV*DEEVVEAGSEWQWG Trigger: TCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTTCACCGACAACCTCCTCCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CAA 90 bp | CGCTTGAGAGAGATCAGCTCCATGTCCAGTTGCCTCAGGATGGTGTaGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGG | + |
Preference number: 2 (lower is better) Translates to: RLREISSMSSCLRMV*AALGLQETATTSSW Trigger: CCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTCTCTCAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | GGTGATGGACCCAGAGTCCGAGGAGCCTGTGGGGTCTGTGCCTCAGGCGGTTTGAGAAGTGGTGGAGGCTaGTTCAGAGTGGCAATGGGG | + |
Preference number: 2 (lower is better) Translates to: GDGPRVRGACGVCASGGLRSGGG*FRVAMG Trigger: CCCCATTGCCACTCTGAACCAGCCTCCACCACTTCT...CAAACCGCCTGAGGCACAGACCCCACAGGCTCCTCGGACTCTGGGTCCATCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACAGTCCGAGGAGCCTGTaGGGTCTGTGCCTCCGCTTC | + |
Preference number: 2 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHSPRSL*GLCLRF Trigger: GAAGCGGAGGCACAGACCCCACAGGCTCCTCGGACT...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
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3UTR CAA 90 bp | GAGATCAGCTCCATGTCCAGTTGCCTCAGGATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATAC | + |
Preference number: 2 (lower is better) Translates to: EISSMSSCLRMVLAA*GLQETATTSSWVRY Trigger: GTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCTGAATCCCAATGAGTaGAGGTGGCTGCTGACCGCC | + |
Preference number: 2 (lower is better) Translates to: GGQTEASCCVTPLTLVHRLNPNE*RWLLTA Trigger: GGCGGTCAGCAGCCACCTTCACTCATTGGGATTCAG...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | TTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCGCTGGCATGTCCTTATaGCTAAGCAGTCAGAGACGC | + |
Preference number: 2 (lower is better) Translates to: LASPHTPSQHTTRRAGRLAGMSL*LSSQRR Trigger: GCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGC...GAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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3UTR CAA 90 bp | AGCATTCTGAACCTGGCGCTTGAGAGAGATCAGCTCCATGTCCAGTaGCCTCAGGATGGTGTTGGCTGCGTTGGGGCTGCAGGAGACAGC | + |
Preference number: 2 (lower is better) Translates to: SILNLALERDQLHVQ*PQDGVGCVGAAGDS Trigger: GCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTCTCTCAAGCGCCAGGTTCAGAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | GGCTGGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGAGTGGATGATGGGGCACTGAATCCCAATGAGTaGAGGTGGCTGCTGACCGCC | + |
Preference number: 2 (lower is better) Translates to: GWFRVAMGTVGVGVDDGALNPNE*RWLLTA Trigger: GGCGGTCAGCAGCCACCTTCACTCATTGGGATTCAG...TGCCCCATCATCCACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR GCA 90 bp | CCAACCGTGGTCAACACTGGTCTTGGGTTTAGGCGGGGTGGCATGGAGTTAGCATGGATGAACCGAGCCTaGTGCTGGAGTGGAGGAGGT | + |
Preference number: 2 (lower is better) Translates to: PTVVNTGLGFRRGGMELAWMNRA*CWSGGG Trigger: ACCTCCTCCACTCCAGCAGCAGGCTCGGTTCATCCA...TGCTAACTCCATGCCACCCCGCCTAAACCCAAGACCAGTGTTGACCACGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACAGGCTGATTGAGAGTTaGCCGGGGCTGGATGAACCG | + |
Preference number: 2 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHRLIES*PGLDEP Trigger: CGGTTCATCCAGCCCCGGCCAACTCTCAATCAGCCT...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | TGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACAGGCTGTGAATCTGTCTaGATCCCAATGAGTGAAGGT | + |
Preference number: 2 (lower is better) Translates to: WLRWGCRRQPPRPPGLDTGCESV*IPMSEG Trigger: ACCTTCACTCATTGGGATTCAGACAGATTCACAGCC...TGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTATGACCCCTCTGATGTaGGCAGCCTGCGGCCCTAGC | + |
Preference number: 2 (lower is better) Translates to: RLYCRSTDERQDDESCHGMTPLM*AACGPS Trigger: GCTAGGGCCGCAGGCTGCCCACATCAGAGGGGTCAT...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACAGAAGTGGTGGAGGCTaGTTCAGAGTGGCAATGGGG | + |
Preference number: 2 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHRSGGG*FRVAMG Trigger: CCCCATTGCCACTCTGAACCAGCCTCCACCACTTCT...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | AAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGAGTGGACCCATGAGATCACAGTaGGCACTAGAAAGGAGGCCA | + |
Preference number: 2 (lower is better) Translates to: KWWRLVQSGNGDCWCWSGPMRSQ*ALERRP Trigger: TGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGG...TCCACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGAGGAGGTTGTCGGTaGAGAGCAGGGGCGGCAGGC | + |
Preference number: 2 (lower is better) Translates to: EGLVCLVWISQMSTGTMIGGGCR*RAGAAG Trigger: GCCTGCCGCCCCTGCTCTTCACCGACAACCTCCTCC...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATTTGGCCGGGGCTGGATaGACCGAGCCTGCTGCTGGA | + |
Preference number: 2 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDLAGAG*TEPAAG Trigger: TCCAGCAGCAGGCTCGGTTCATCCAGCCCCGGCCAA...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR GCA 90 bp | GGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGAGTGGATGATCAAACAGAGGCCTCCTaGTGTGTCACACCACTTACA | + |
Preference number: 2 (lower is better) Translates to: GGGWFRVAMGTVGVGVDDQTEAS*CVTPLT Trigger: TGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTG...ATCATCCACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | TGGCATGGAGTTAGCAGGGCGAATGAGAGGTGGAGGAGGCTGATTGAGAGTTGGTGTTGGACGAAGAAGTaGTGGAGGCTGGTTCAGAGT | + |
Preference number: 2 (lower is better) Translates to: WHGVSRANERWRRLIESWCWTKK*WRLVQS Trigger: ACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACA...CCAACTCTCAATCAGCCTCCTCCACCTCTCATTCGCCCTGCTAACTCCATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | GGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGAGTGGATGATTGTTGGACGAAGAAGTaGTGGAGGCTGGTTCAGAGT | + |
Preference number: 2 (lower is better) Translates to: GGGWFRVAMGTVGVGVDDCWTKK*WRLVQS Trigger: ACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACA...ATCATCCACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAAGGCGGCAGGCAGTGTTaGACGAAGAAGTGGTGGAGG | + |
Preference number: 2 (lower is better) Translates to: GEPLSSVISAVKAVNLSEGGRQC*TKKWWR Trigger: CCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCC...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACGGCTGTGAATCTGTCTaGATCCCAATGAGTGAAGGT | + |
Preference number: 2 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHGCESV*IPMSEG Trigger: ACCTTCACTCATTGGGATTCAGACAGATTCACAGCC...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | TTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTGTCAGTGCTCTTCCCTaGCGGCACCTTAGAAGCACT | + |
Preference number: 2 (lower is better) Translates to: FSSHEITVGTRKEAKQRPVSALP*RHLRST Trigger: AGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGAC...AGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGGTGGAGGAGGCTGATTaGGAGTTGGCCGGGGCTGGA | + |
Preference number: 2 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRVEEAD*ELAGAG Trigger: TCCAGCCCCGGCCAACTCTCAATCAGCCTCCTCCAC...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCAAGAAGTTCTTCACTTaGCCAACAGTCTTGTTGCCA | + |
Preference number: 2 (lower is better) Translates to: GGQTEASCCVTPLTLVHRKKFFT*PTVLLP Trigger: TGGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTT...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACTCAGCATTAGAAGCCTaGGTTCCTTGTTCTGCTTCC | + |
Preference number: 2 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHSALEA*VPCSAS Trigger: GGAAGCAGAACAAGGAACCCAGGCTTCTAATGCTGA...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
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3UTR CAA 90 bp | TTTGGACCGGCTGGTCAGCGTTACCCTCTCTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGTTTCCATCCATGGGGTGAGCTTCTT | + |
Preference number: 2 (lower is better) Translates to: FGPAGQRYPLFWLLS*GRSHCRFHPWGELL Trigger: AAGAAGCTCACCCCATGGATGGAAACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGCTGACCAGCCGGTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | TGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACAGCCATGTTTCTCTTTTaGAATGGCGATATATTCATC | + |
Preference number: 2 (lower is better) Translates to: WLRWGCRRQPPRPPGLDTAMFLF*NGDIFI Trigger: GATGAATATATCGCCATTGCAAAAGAGAAACATGGC...TGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAAGAGGCTGGTTCAGAGTaGCAATGGGGACTGTTGGTG | + |
Preference number: 2 (lower is better) Translates to: GEPLSSVISAVKAVNLSEEAGSE*QWGLLV Trigger: CACCAACAGTCCCCATTGCCACTCTGAACCAGCCTC...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR TCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATCTGAATCCCAATGAGTaGAGGTGGCTGCTGACCGCC | + |
Preference number: 2 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDLNPNE*RWLLTA Trigger: GGCGGTCAGCAGCCACCTTCACTCATTGGGATTCAG...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR GCA 90 bp | TTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCAAACAGAGGCCTCCTaGTGTGTCACACCACTTACA | + |
Preference number: 2 (lower is better) Translates to: FSSHEITVGTRKEAKQRPQTEAS*CVTPLT Trigger: TGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTG...AGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR GCA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCTTTAAACAAGGACTTTaGACTAGGACCCCAAACTAT | + |
Preference number: 2 (lower is better) Translates to: GGQTEASCCVTPLTLVHRFKQGL*TRTPNY Trigger: ATAGTTTGGGGTCCTAGTGCAAAGTCCTTGTTTAAA...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTATGAACCGAGCCTGCTaGTGGAGTGGAGGAGGTTGT | + |
Preference number: 2 (lower is better) Translates to: VCLVWISQMSTGTMIGEPMNRAC*WSGGGC Trigger: ACAACCTCCTCCACTCCAGCAGCAGGCTCGGTTCAT...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR GCA 90 bp | CAGGCAGTGTTGGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGATCAATGTTGTGTTTATaGCAGAACAACATGCCAAGC | + |
Preference number: 2 (lower is better) Translates to: QAVLDEEVVEAGSEWQWGSMLCL*QNNMPS Trigger: GCTTGGCATGTTGTTCTGGCATAAACACAACATTGA...TCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR-3UTR CCA 90 bp | CATCCCTCAGATACAGCACCTAAGCCACAGATACTGAACATCTGGACAGATGCTCCCATGAGATCACAGTaGGCACTAGAAAGGAGGCCA | + |
Preference number: 2 (lower is better) Translates to: HPSDTAPKPQILNIWTDAPMRSQ*ALERRP Trigger: TGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGG...AGCATCTGTCCAGATGTTCAGTATCTGTGGCTTAGGTGCTGTATCTGAGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
||
3UTR-3UTR CCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAAACCGAGCCTGCTGCTaGAGTGGAGGAGGTTGTCGG | + |
Preference number: 2 (lower is better) Translates to: EGLVCLVWISQMSTGTMINRACC*SGGGCR Trigger: CCGACAACCTCCTCCACTCCAGCAGCAGGCTCGGTT...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGGAGGAGGTTGTCGGTaGAGAGCAGGGGCGGCAGGC | + |
Preference number: 2 (lower is better) Translates to: KSNHKLRLVERIIQMYSDGGGCR*RAGAAG Trigger: GCCTGCCGCCCCTGCTCTTCACCGACAACCTCCTCC...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR-3UTR CCA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTGGTGTTGGCTGCGTTaGGGCTGCAGGAGACAGCCA | + |
Preference number: 2 (lower is better) Translates to: LWVLMTLHWNKKALSLCFWCWLR*GCRRQP Trigger: TGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCA...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAAGGCTGTGAATCTGTCTaGATCCCAATGAGTGAAGGT | + |
Preference number: 2 (lower is better) Translates to: GEPLSSVISAVKAVNLSEGCESV*IPMSEG Trigger: ACCTTCACTCATTGGGATTCAGACAGATTCACAGCC...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR TCA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATGTGGAGGAGGCTGATTaGGAGTTGGCCGGGGCTGGA | + |
Preference number: 2 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDVEEAD*ELAGAG Trigger: TCCAGCCCCGGCCAACTCTCAATCAGCCTCCTCCAC...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | CCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAACAAACAGAGGCCTCCTaGTGTGTCACACCACTTACA | + |
Preference number: 2 (lower is better) Translates to: PLSSVISAVKAVNLSESQQTEAS*CVTPLT Trigger: TGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTG...TTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAAGCTAGTTTACGAGCCTaGCGATCCATCAAACTTGTC | + |
Preference number: 2 (lower is better) Translates to: GEPLSSVISAVKAVNLSEASLRA*RSIKLV Trigger: GACAAGTTTGATGGATCGCCAGGCTCGTAAACTAGC...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTGGACGAAGAAGTGGTaGAGGCTGGTTCAGAGTGGC | + |
Preference number: 2 (lower is better) Translates to: SLWVLMTLHWNKKALSLCWTKKW*RLVQSG Trigger: GCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCA...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCGCCTCAGGATGGTGTTaGCTGCGTTGGGGCTGCAGG | + |
Preference number: 2 (lower is better) Translates to: TLHWNKKALSLCFFIKTIASGWC*LRWGCR Trigger: CCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGC...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTCCGCTACATCACACTaGAGTCTAAAGCCACACCAT | + |
Preference number: 2 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRSATSH*SLKPHH Trigger: ATGGTGTGGCTTTAGACTTCAGTGTGATGTAGCGGA...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATACAAACAGAGGCCTCCTaGTGTGTCACACCACTTACA | + |
Preference number: 2 (lower is better) Translates to: EGLVCLVWISQMSTGTMIQTEAS*CVTPLT Trigger: TGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTG...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR GCA 90 bp | ACATCTCCCACAGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAACTCTACAGCAAGCCATaGTTCCCATATGAAGTCATT | + |
Preference number: 2 (lower is better) Translates to: TSPTDCTAGLLTRDKTMKLYSKP*FPYEVI Trigger: AATGACTTCATATGGGAAGCATGGCTTGCTGTAGAG...TTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCTGTGGGAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTAAAAAGGGCCTTTTCTaGAAGCCACTTTCAATCACA | + |
Preference number: 2 (lower is better) Translates to: RLYCRSTDERQDDESCHGKKGLF*KPLSIT Trigger: TGTGATTGAAAGTGGCTTGCAGAAAAGGCCCTTTTT...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCAACCGAGCCTGCTGCTaGAGTGGAGGAGGTTGTCGG | + |
Preference number: 2 (lower is better) Translates to: TLHWNKKALSLCFFIKTINRACC*SGGGCR Trigger: CCGACAACCTCCTCCACTCCAGCAGCAGGCTCGGTT...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | GGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTCCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGC | + |
Preference number: 2 (lower is better) Translates to: GLVCLVWISQMSTGTMIGPDCVY*LVYEPG Trigger: GCCAGGCTCGTAAACTAGCCAATAGACACAATCAGG...ACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTTTTAAACAAGGACTTTaGACTAGGACCCCAAACTAT | + |
Preference number: 2 (lower is better) Translates to: RLYCRSTDERQDDESCHGFKQGL*TRTPNY Trigger: ATAGTTTGGGGTCCTAGTGCAAAGTCCTTGTTTAAA...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATATATGCCAGAACAACATaGCAAGCGCCTGTTCAACAT | + |
Preference number: 2 (lower is better) Translates to: EGLVCLVWISQMSTGTMIYARTT*QAPVQH Trigger: ATGTTGAACAGGCGCTTGGCATGTTGTTCTGGCATA...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGCCCATGAGATCACAGTaGGCACTAGAAAGGAGGCCA | + |
Preference number: 2 (lower is better) Translates to: KTKPNQTLFVSNTDPLSEPMRSQ*ALERRP Trigger: TGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGG...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGAGGCTGGTTCAGAGTaGCAATGGGGACTGTTGGTG | + |
Preference number: 2 (lower is better) Translates to: KSNHKLRLVERIIQMYSDEAGSE*QWGLLV Trigger: CACCAACAGTCCCCATTGCCACTCTGAACCAGCCTC...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | CATCCCTCAGATACAGCACCTAAGCCACAGATACTGAACATCTGGACAGATGCTTGCAATTGTCTTATCTaGAAGCATTTGCTGAATCCT | + |
Preference number: 2 (lower is better) Translates to: HPSDTAPKPQILNIWTDACNCLI*KHLLNP Trigger: AGGATTCAGCAAATGCTTCCAGATAAGACAATTGCA...AGCATCTGTCCAGATGTTCAGTATCTGTGGCTTAGGTGCTGTATCTGAGGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGCCACCACGTCCTCCTaGGTTAGATACATGCCCTTA | + |
Preference number: 2 (lower is better) Translates to: KSNHKLRLVERIIQMYSDATTSS*VRYMPL Trigger: TAAGGGCATGTATCTAACCCAGGAGGACGTGGTGGC...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGCAGGCTATTTATCTTaGACTCCTAACATAGGAAAG | + |
Preference number: 2 (lower is better) Translates to: EGLVCLVWISQMSTGTMIAGYLS*TPNIGK Trigger: CTTTCCTATGTTAGGAGTGCAAGATAAATAGCCTGC...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | CTAAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATTGCAACAACACAATaGGCTCATCTTGTGATGCCG | + |
Preference number: 2 (lower is better) Translates to: LNQTTSSGWLKGSYKCIQIATTQ*AHLVMP Trigger: CGGCATCACAAGATGAGCTCATTGTGTTGTTGCAAT...CTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR CAA 90 bp | GATGCCGATGACTTAGCCCTAAATCAAACCACAAGCTCAGGTTGGTaGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATTTA | + |
Preference number: 2 (lower is better) Translates to: DADDLALNQTTSSGW*KGSYKCIQMFNRDL Trigger: TAAATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAGGGCTAAGTCATCGGCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTCATTTTCTGCTTAAGTaGACTGTTTACTTGCTTAGC | + |
Preference number: 2 (lower is better) Translates to: SLWVLMTLHWNKKALSLCHFLLK*TVYLLS Trigger: GCTAAGCAAGTAAACAGTGCACTTAAGCAGAAAATG...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATTCCTTTTTCTGCATGTaGGTGATTCCAAACCTCTAT | + |
Preference number: 2 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDSFFCM*VIPNLY Trigger: ATAGAGGTTTGGAATCACTCACATGCAGAAAAAGGA...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCTCCTTTTTCTGCATGTaGGTGATTCCAAACCTCTAT | + |
Preference number: 2 (lower is better) Translates to: TLHWNKKALSLCFFIKTISFFCM*VIPNLY Trigger: ATAGAGGTTTGGAATCACTCACATGCAGAAAAAGGA...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATCAAGCTCAGGTTGGTTaGAAGGATCATACAAATGTA | + |
Preference number: 2 (lower is better) Translates to: KSNHKLRLVERIIQMYSDQAQVG*KDHTNV Trigger: TACATTTGTATGATCCTTTCAACCAACCTGAGCTTG...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR TCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATTTTTCTGCATGTGAGTaGTTCCAAACCTCTATTACT | + |
Preference number: 2 (lower is better) Translates to: KSNHKLRLVERIIQMYSDFSACE*FQTSIT Trigger: AGTAATAGAGGTTTGGAATCACTCACATGCAGAAAA...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR GCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATTTTAAACAAGGACTTTaGACTAGGACCCCAAACTAT | + |
Preference number: 2 (lower is better) Translates to: KSNHKLRLVERIIQMYSDFKQGL*TRTPNY Trigger: ATAGTTTGGGGTCCTAGTGCAAAGTCCTTGTTTAAA...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR CCA 72 bp | CCATGTCCAGTTGCCTCAGGATGGTGTTGGCTGCGTTaGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGG | + |
Preference number: 3 (lower is better) Translates to: PCPVASGWCWLR*GCRRQPPRPPG Trigger: CCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR GCA 72 bp | GCAGACTCTGGTACTCTCTCCGGCCCAGGCCGATCTTaGTGGTTTGGACCGGCTGGTCAGCGTTACCCTCTC | + |
Preference number: 3 (lower is better) Translates to: ADSGTLSGPGRS*WFGPAGQRYPL Trigger: GAGAGGGTAACGCTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGGGCCGGAGAGAGTACCAGAGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR GCA 72 bp | CAGCTCCATGTCCAGTTGCCTCAGGATGGTGTTGGCTaGGTTGGGGCTGCAGGAGACAGCCACCACGTCCTC | + |
Preference number: 3 (lower is better) Translates to: QLHVQLPQDGVG*VGAAGDSHHVL Trigger: GAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 72 bp | GCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTaGGTTAGATACATGCCCTTAGGAGGGCGGCACTTG | + |
Preference number: 3 (lower is better) Translates to: ALGLQETATTSS*VRYMPLGGRHL Trigger: CAAGTGCCGCCCTCCTAAGGGCATGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR GCA 72 bp | CCAGTTGCCTCAGGATGGTGTTGGCTGCGTTGGGGCTaGAGGAGACAGCCACCACGTCCTCCTGGGTTAGAT | + |
Preference number: 3 (lower is better) Translates to: PVASGWCWLRWG*RRQPPRPPGLD Trigger: ATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 72 bp | AGGTTGTCGGTGAAGAGCAGGGGCGGCAGGCAGTGTTaGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGC | + |
Preference number: 3 (lower is better) Translates to: RLSVKSRGGRQC*TKKWWRLVQSG Trigger: GCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTTCACCGACAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR GCA 72 bp | ACCTGGCGCTTGAGAGAGATCAGCTCCATGTCCAGTTaGCTCAGGATGGTGTTGGCTGCGTTGGGGCTGCAG | + |
Preference number: 3 (lower is better) Translates to: TWRLREISSMSS*LRMVLAALGLQ Trigger: CTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTCTCTCAAGCGCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 72 bp | AAGAGCAGGGGCGGCAGGCAGTGTTGGACGAAGAAGTaGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTGT | + |
Preference number: 3 (lower is better) Translates to: KSRGGRQCWTKK*WRLVQSGNGDC Trigger: ACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR CCA 72 bp | TGGTACTCTCTCCGGCCCAGGCCGATCTTGCTGGTTTaGACCGGCTGGTCAGCGTTACCCTCTCTTTTGGCT | + |
Preference number: 3 (lower is better) Translates to: WYSLRPRPILLV*TGWSALPSLLA Trigger: AGCCAAAAGAGAGGGTAACGCTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGGGCCGGAGAGAGTACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR CCA 72 bp | GACTCTGGTACTCTCTCCGGCCCAGGCCGATCTTGCTaGTTTGGACCGGCTGGTCAGCGTTACCCTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: DSGTLSGPGRSC*FGPAGQRYPLF Trigger: AAAGAGAGGGTAACGCTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGGGCCGGAGAGAGTACCAGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR CCA 72 bp | AGATCAGCTCCATGTCCAGTTGCCTCAGGATGGTGTTaGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGT | + |
Preference number: 3 (lower is better) Translates to: RSAPCPVASGWC*LRWGCRRQPPR Trigger: ACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR-3UTR CAA 90 bp | GGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACTGGGGACTGTTGGTGTaGGAGTGGATGATGGGGCAG | + |
Preference number: 3 (lower is better) Translates to: GQTEASCCVTPLTLVHRHWGLLV*EWMMGQ Trigger: CTGCCCCATCATCCACTCCAACACCAACAGTCCCCA...GTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR TCA 72 bp | GGTCTGTGCCTCCGCTTCTTCGTCAGTGCTCTTCCCTaGCGGCACCTTAGAAGCACTTTGTGTCTCCTCCCC | + |
Preference number: 3 (lower is better) Translates to: GLCLRFFVSALP*RHLRSTLCLLP Trigger: GGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGACGAAGAAGCGGAGGCACAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
||
3UTR CCA 72 bp | GCGGCAGGCAGTGTTGGACGAAGAAGTGGTGGAGGCTaGTTCAGAGTGGCAATGGGGACTGTTGGTGTTGGA | + |
Preference number: 3 (lower is better) Translates to: AAGSVGRRSGGG*FRVAMGTVGVG Trigger: TCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CCA 72 bp | CTCCGGCCCAGGCCGATCTTGCTGGTTTGGACCGGCTaGTCAGCGTTACCCTCTCTTTTGGCTTCTTTCTTT | + |
Preference number: 3 (lower is better) Translates to: LRPRPILLVWTG*SALPSLLASFF Trigger: AAAGAAAGAAGCCAAAAGAGAGGGTAACGCTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGGGCCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR-3UTR CAA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACTGGCAATGGGGACTGTaGGTGTTGGAGTGGATGATG | + |
Preference number: 3 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHWQWGL*VLEWMM Trigger: CATCATCCACTCCAACACCAACAGTCCCCATTGCCA...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR TCA 72 bp | CAAACACACCTCCGCTTCTTCGTCAGTGCTCTTCCCTaGCGGCACCTTAGAAGCACTTTGTGTCTCCTCCCC | + |
Preference number: 3 (lower is better) Translates to: QTHLRFFVSALP*RHLRSTLCLLP Trigger: GGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGACGAAGAAGCGGAGGTGTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
||
3UTR-3UTR CAA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACGCGTTACCCTCTCTTTaGGCTTCTTTCTTTGGGTCG | + |
Preference number: 3 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHALPSL*ASFFGS Trigger: CGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGC...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR TCA 72 bp | AGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAATaGGTGAAGGTGGCTGCTGACCGCCAACCGTGGTCA | + |
Preference number: 3 (lower is better) Translates to: SAVKAVNLSESQ*VKVAADRQPWS Trigger: TGACCACGGTTGGCGGTCAGCAGCCACCTTCACTCATTGGGATTCAGACAGATTCACAGCCTTCACTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR CAA 90 bp | CGGCAGGCAGTGTTGGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGACTAGTTTGCCTTGTTaGGATCAGTCAGATGAGCAC | + |
Preference number: 3 (lower is better) Translates to: RQAVLDEEVVEAGSEWQWTSLPC*DQSDEH Trigger: GTGCTCATCTGACTGATCCAAACAAGGCAAACTAGT...CCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR CAA 90 bp | TGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGGGTTAGATACAAGGGACTTCTCAATGTaGTGTTTATGCCAGAACAAC | + |
Preference number: 3 (lower is better) Translates to: WLRWGCRRQPPRPPGLDTRDFSM*CLCQNN Trigger: GTTGTTCTGGCATAAACACAACATTGAGAAGTCCCT...TGTATCTAACCCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR TCA 72 bp | TTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATaGCTAAGCAGTCAGAGACGCCTCACGAGGAAGTGT | + |
Preference number: 3 (lower is better) Translates to: FALLGPEAGMSL*LSSQRRLTRKC Trigger: ACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
||
3UTR-3UTR CAA 90 bp | CCAACCGTGGTCAACACTGGTCTTGGGTTTAGGCGGGGTGGCATGGAGTTAGCAATGATAGGTGAGCCTTaGTCCAGCGTAATTAGTGCA | + |
Preference number: 3 (lower is better) Translates to: PTVVNTGLGFRRGGMELAMIGEP*SSVISA Trigger: TGCACTAATTACGCTGGACAAAGGCTCACCTATCAT...TGCTAACTCCATGCCACCCCGCCTAAACCCAAGACCAGTGTTGACCACGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
||
3UTR-3UTR CAA 90 bp | CAGAAGGGCGGGGCGGCTCCTCAGCTCAGATTAGCTCAGATTCCAGACACAAACAAAGAAGTTCTTCACTaGGCCAACAGTCTTGTTGCC | + |
Preference number: 3 (lower is better) Translates to: QKGGAAPQLRLAQIPDTNKEVLH*ANSLVA Trigger: GGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTTT...GTTTGTGTCTGGAATCTGAGCTAATCTGAGCTGAGGAGCCGCCCCGCCCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
||
3UTR-3UTR CAA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGGGGCGGCAGGCAGTGTaGGACGAAGAAGTGGTGGAG | + |
Preference number: 3 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRGRQAV*DEEVVE Trigger: CTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCC...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CAA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCAAACCAAACACTCTTaGTATCAAACACAGATCCTC | + |
Preference number: 3 (lower is better) Translates to: GGQTEASCCVTPLTLVHRQTKHS*YQTQIL Trigger: GAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTG...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
||
3UTR-3UTR CAA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCACAAGCTCAGGTTGGTaGAAAGGATCATACAAATGT | + |
Preference number: 3 (lower is better) Translates to: GGQTEASCCVTPLTLVHRTSSGW*KGSYKC Trigger: ACATTTGTATGATCCTTTCAACCAACCTGAGCTTGT...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
||
3UTR CCA 72 bp | TCCTCCCCTAAAGCAGAAGCATCAGCATTAGAAGCCTaGGTTCCTTGTTCTGCTTCCCACTCCTGCAATACC | + |
Preference number: 3 (lower is better) Translates to: SSPKAEASALEA*VPCSASHSCNT Trigger: GGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCAGGCTTCTAATGCTGATGCTTCTGCTTTAGGGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192222.6 ENSMUST00000192491.6 |
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3UTR CCA 72 bp | TGGTTTGGACCGGCTGGTCAGCGTTACCCTCTCTTTTaGCTTCTTTCTTTGGGTCGTAGTCACTGTCGTTTC | + |
Preference number: 3 (lower is better) Translates to: WFGPAGQRYPLF*LLSLGRSHCRF Trigger: GAAACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGCTGACCAGCCGGTCCAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | TGGCATGGAGTTAGCAGGGCGAATGAGAGGTGGAGGAGGCTGATTGAGAGTTGGCTTATCTGGAAGCATTaGCTGAATCCTGTGAAAGCT | + |
Preference number: 3 (lower is better) Translates to: WHGVSRANERWRRLIESWLIWKH*LNPVKA Trigger: AGCTTTCACAGGATTCAGCAAATGCTTCCAGATAAG...CCAACTCTCAATCAGCCTCCTCCACCTCTCATTCGCCCTGCTAACTCCATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR GCA 72 bp | GGGAGGTCCGCAAGGGACTTCTCAATGTTGTGTTTATaGCAGAACAACATGCCAAGCGCCTGTTCAACATTG | + |
Preference number: 3 (lower is better) Translates to: GRSARDFSMLCL*QNNMPSACSTL Trigger: CAATGTTGAACAGGCGCTTGGCATGTTGTTCTGGCATAAACACAACATTGAGAAGTCCCTTGCGGACCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
||
3UTR CCA 72 bp | AGACCCCCGCCACAGGAAGGACTAGTTTGCCTTGTTTaGATCAGTCAGATGAGCACTGGTACAATGATAGGT | + |
Preference number: 3 (lower is better) Translates to: RPPPQEGLVCLV*ISQMSTGTMIG Trigger: ACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCCTGTGGCGGGGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CCA 72 bp | GGTAGACAGAATACTTTTCTTCCCATGAGATCACAGTaGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTG | + |
Preference number: 3 (lower is better) Translates to: GRQNTFLPMRSQ*ALERRPNRGLL Trigger: CAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGTATTCTGTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CAA 90 bp | TTCCCTGACGGCACCTTAGAAGCACTTTGTGTCTCCTCCCCTAAAGCAGAAGCAAAAGAAGTTCTTCACTaGGCCAACAGTCTTGTTGCC | + |
Preference number: 3 (lower is better) Translates to: FPDGTLEALCVSSPKAEAKEVLH*ANSLVA Trigger: GGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTTT...TGCTTCTGCTTTAGGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192222.6 ENSMUST00000192491.6 |
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3UTR TCA 72 bp | GTCCGCTACATCACACTGAAGTCTAAAGCCACACCATaGTTCAAGAAGTGCATGGTCAAGGGTCCAGAAGGT | + |
Preference number: 3 (lower is better) Translates to: VRYITLKSKATP*FKKCMVKGPEG Trigger: ACCTTCTGGACCCTTGACCATGCACTTCTTGAATCATGGTGTGGCTTTAGACTTCAGTGTGATGTAGCGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCACTAGTTTGCCTTGTTaGGATCAGTCAGATGAGCAC | + |
Preference number: 3 (lower is better) Translates to: TFLPMRSQWALERRPNRGTSLPC*DQSDEH Trigger: GTGCTCATCTGACTGATCCAAACAAGGCAAACTAGT...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CAA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCC | + |
Preference number: 3 (lower is better) Translates to: KTKPNQTLFVSNTDPLSEMVLAA*GLQETA Trigger: GGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCAT...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | CATCCCTCAGATACAGCACCTAAGCCACAGATACTGAACATCTGGACAGATGCTACTAGTTTGCCTTGTTaGGATCAGTCAGATGAGCAC | + |
Preference number: 3 (lower is better) Translates to: HPSDTAPKPQILNIWTDATSLPC*DQSDEH Trigger: GTGCTCATCTGACTGATCCAAACAAGGCAAACTAGT...AGCATCTGTCCAGATGTTCAGTATCTGTGGCTTAGGTGCTGTATCTGAGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR CCA 72 bp | CTACGTCATCATCACTGTCACCCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGCGATCCATCAAACTTG | + |
Preference number: 3 (lower is better) Translates to: LRHHHCHPDCVY*LVYEPGDPSNL Trigger: CAAGTTTGATGGATCGCCAGGCTCGTAAACTAGCCAATAGACACAATCAGGGTGACAGTGATGATGACGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CCA 72 bp | GAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTaGCATGTCCTTATGACTAAGCAGTCAGAGACGCCT | + |
Preference number: 3 (lower is better) Translates to: EIIHFRSARTRS*HVLMTKQSETP Trigger: AGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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3UTR-3UTR CAA 90 bp | ACATCTCCCACAGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAATGGGTGCTAATGACTTaGCATTGGAATAAAAAGGCC | + |
Preference number: 3 (lower is better) Translates to: TSPTDCTAGLLTRDKTMKWVLMT*HWNKKA Trigger: GGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCA...TTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCTGTGGGAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGT | + |
Preference number: 3 (lower is better) Translates to: VCLVWISQMSTGTMIGEPFWLLS*GRSHCR Trigger: ACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAA...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | GGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTACTAGTTTGCCTTGTTaGGATCAGTCAGATGAGCAC | + |
Preference number: 3 (lower is better) Translates to: GLVCLVWISQMSTGTMIGTSLPC*DQSDEH Trigger: GTGCTCATCTGACTGATCCAAACAAGGCAAACTAGT...ACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR-3UTR CAA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATTGGCAATGGGGACTGTaGGTGTTGGAGTGGATGATG | + |
Preference number: 3 (lower is better) Translates to: KSNHKLRLVERIIQMYSDWQWGL*VLEWMM Trigger: CATCATCCACTCCAACACCAACAGTCCCCATTGCCA...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR GCA 72 bp | GAGAGACAAGACGATGAAAGCTGTCACGGTATAATATaGACGTACACAAGACAAGTGCTTTCAAAAATGCTC | + |
Preference number: 3 (lower is better) Translates to: ERQDDESCHGII*TYTRQVLSKML Trigger: GAGCATTTTTGAAAGCACTTGTCTTGTGTACGTGCATATTATACCGTGACAGCTTTCATCGTCTTGTCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCCTGGTGCTGAACAACTaGACTGACATCTCCCACAGA | + |
Preference number: 3 (lower is better) Translates to: TLHWNKKALSLCFFIKTILVLNN*TDISHR Trigger: TCTGTGGGAGATGTCAGTCAAGTTGTTCAGCACCAG...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATATTTGTACTAACAGTTTaGAGTATGAAGAGGCAGGAA | + |
Preference number: 3 (lower is better) Translates to: EGLVCLVWISQMSTGTMIFVLTV*SMKRQE Trigger: TTCCTGCCTCTTCATACTCAAAACTGTTAGTACAAA...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR TCA 72 bp | GAAGTCATTCTATCAAAGCTGTCAGTAACACGCTGTTaGAACTCCGCCATAGTAAAATATTCTTTGTGGGTG | + |
Preference number: 3 (lower is better) Translates to: EVILSKLSVTRC*NSAIVKYSLWV Trigger: CACCCACAAAGAATATTTTACTATGGCGGAGTTTCAACAGCGTGTTACTGACAGCTTTGATAGAATGACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATATGATAGGTGAGCCTTaGTCCAGCGTAATTAGTGCA | + |
Preference number: 3 (lower is better) Translates to: KSNHKLRLVERIIQMYSDMIGEP*SSVISA Trigger: TGCACTAATTACGCTGGACAAAGGCTCACCTATCAT...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR-3UTR CAA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATCAAACCAAACACTCTTaGTATCAAACACAGATCCTC | + |
Preference number: 3 (lower is better) Translates to: KSNHKLRLVERIIQMYSDQTKHS*YQTQIL Trigger: GAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTG...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | GGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: GQTEASCCVTPLTLVHRHARRRC*SRSRAP Trigger: CGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGC...GTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
||
CDS-3UTR TCA 90 bp | GGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACTTGGCCGGGGCTGGATaGACCGAGCCTGCTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: GQTEASCCVTPLTLVHRHLAGAG*TEPAAG Trigger: TCCAGCAGCAGGCTCGGTTCATCCAGCCCCGGCCAA...GTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
||
CDS-3UTR GCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHSGSEK*SPPLAE Trigger: CTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGA...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
||
CDS-3UTR GCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACCGTGCTCGTCGTCGCTaGTGCAGCCGCTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHRARRR*CSRSRA Trigger: AGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACG...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | GCTGACCGCCAACCGTGGTCAACACTGGTCTTGGGTTTAGGCGGGGTGGCATGGATCCCAACATCCCCGTaGTCGTCGTCGCTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: ADRQPWSTLVLGLGGVAWIPTSP*SSSLLQ Trigger: CTGCAGCAGCGACGACGAGCACGGGGATGTTGGGAT...CCATGCCACCCCGCCTAAACCCAAGACCAGTGTTGACCACGGTTGGCGGTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | TTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCCAGGATGGTGTTGGCTaGGTTGGGGCTGCAGGAGAC | + |
Preference number: 4 (lower is better) Translates to: LASPHTPSQHTTRRAGRLQDGVG*VGAAGD Trigger: GTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTG...GAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
||
3UTR CAA 72 bp | TCCATGTCCAGTTGCCTCAGGATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCCACCACGTCCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: SMSSCLRMVLAA*GLQETATTSSW Trigger: CCAGGAGGACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CAA 72 bp | GAGGTTGTCGGTGAAGAGCAGGGGCGGCAGGCAGTGTaGGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGG | + |
Preference number: 4 (lower is better) Translates to: EVVGEEQGRQAV*DEEVVEAGSEW Trigger: CCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCCCTGCTCTTCACCGACAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CAA 72 bp | CTGGTACTCTCTCCGGCCCAGGCCGATCTTGCTGGTTaGGACCGGCTGGTCAGCGTTACCCTCTCTTTTGGC | + |
Preference number: 4 (lower is better) Translates to: LVLSPAQADLAG*DRLVSVTLSFG Trigger: GCCAAAAGAGAGGGTAACGCTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGGGCCGGAGAGAGTACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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3UTR CAA 72 bp | GAGATCAGCTCCATGTCCAGTTGCCTCAGGATGGTGTaGGCTGCGTTGGGGCTGCAGGAGACAGCCACCACG | + |
Preference number: 4 (lower is better) Translates to: EISSMSSCLRMV*AALGLQETATT Trigger: CGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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CDS-3UTR TCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACGTGGAGGAGGCTGATTaGGAGTTGGCCGGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHVEEAD*ELAGAG Trigger: TCCAGCCCCGGCCAACTCTCAATCAGCCTCCTCCAC...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | TCAGTGCTCTTCCCTGACGGCACCTTAGAAGCACTTTGTGTCTCCTCCCCTAAAGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: SVLFPDGTLEALCVSSPKARRRC*SRSRAP Trigger: CGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGC...TTTAGGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACGGCGGCAGGCAGTGTTaGACGAAGAAGTGGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: GQTEASCCVTPLTLVHRHGGRQC*TKKWWR Trigger: CCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCC...GTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | CACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: HFRSARTRSWHVLMTKQSARRRC*SRSRAP Trigger: CGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGC...TGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACATCCCAACATCCCCGTaGTCGTCGTCGCTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHIPTSP*SSSLLQ Trigger: CTGCAGCAGCGACGACGAGCACGGGGATGTTGGGAT...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CCA 90 bp | TTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCGCCACCACGTCCTCCTaGGTTAGATACATGCCCTTA | + |
Preference number: 4 (lower is better) Translates to: LASPHTPSQHTTRRAGRLATTSS*VRYMPL Trigger: TAAGGGCATGTATCTAACCCAGGAGGACGTGGTGGC...GAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACGCCTCAGGATGGTGTTaGCTGCGTTGGGGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHASGWC*LRWGCR Trigger: CCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGC...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
||
CDS-3UTR CCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACAGAGTTGGCCGGGGCTaGATGAACCGAGCCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHRVGRG*MNRACC Trigger: GCAGCAGGCTCGGTTCATCCAGCCCCGGCCAACTCT...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: TFLPMRSQWALERRPNRGSGSEK*SPPLAE Trigger: CTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGA...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | GTCTCCTCCCCTAAAGCAGAAGCATCAGCATTAGAAGCCTGGGTTCCTTGTTCTCGTGCTCGTCGTCGCTaGTGCAGCCGCTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: VSSPKAEASALEAWVPCSRARRR*CSRSRA Trigger: AGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACG...AGAACAAGGAACCCAGGCTTCTAATGCTGATGCTTCTGCTTTAGGGGAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCGTACTTGGTAGCACCTaGATCGAATTCAGGGATCCG | + |
Preference number: 4 (lower is better) Translates to: LASPHTPSQHTTRRAGRLVLGST*IEFRDP Trigger: CGGATCCCTGAATTCGATCCAGGTGCTACCAAGTAC...GAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCCAGGCCGATCTTGCTaGTTTGGACCGGCTGGTCAG | + |
Preference number: 4 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHPGRSC*FGPAGQ Trigger: CTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGG...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGCCTCAGGATGGTGTTaGCTGCGTTGGGGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: RTRSWHVLMTKQSETPHEASGWC*LRWGCR Trigger: CCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGC...CTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GCTGACCGCCAACCGTGGTCAACACTGGTCTTGGGTTTAGGCGGGGTGGCATGGTGTTGGACGAAGAAGTaGTGGAGGCTGGTTCAGAGT | + |
Preference number: 4 (lower is better) Translates to: ADRQPWSTLVLGLGGVAWCWTKK*WRLVQS Trigger: ACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACA...CCATGCCACCCCGCCTAAACCCAAGACCAGTGTTGACCACGGTTGGCGGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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3UTR CAA 72 bp | GTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTGTaGGTGTTGGAGTGGATGATGGGGCAGGAGGTGATG | + |
Preference number: 4 (lower is better) Translates to: VVEAGSEWQWGL*VLEWMMGQEVM Trigger: CATCACCTCCTGCCCCATCATCCACTCCAACACCAACAGTCCCCATTGCCACTCTGAACCAGCCTCCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192158.6 ENSMUST00000192222.6 |
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3UTR CAA 72 bp | AACCTGGCGCTTGAGAGAGATCAGCTCCATGTCCAGTaGCCTCAGGATGGTGTTGGCTGCGTTGGGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: NLALERDQLHVQ*PQDGVGCVGAA Trigger: TGCAGCCCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTCTCTCAAGCGCCAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | TATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: YCQPYAHLASPHTPSQHTSGSEK*SPPLAE Trigger: CTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGA...GGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | CTTCTTTCTTTGGGTCGTAGTCACTGTCGTTTCCATCCATGGGGTGAGCTTCTTTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: LLSLGRSHCRFHPWGELLSGSEK*SPPLAE Trigger: CTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGA...AAGAAGCTCACCCCATGGATGGAAACGACAGTGACTACGACCCAAAGAAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | CAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAGCTTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: QSETPHEEVYCQPYAHLASGSEK*SPPLAE Trigger: CTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGA...AGCTAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAACGTGCTCGTCGTCGCTaGTGCAGCCGCTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: GEPLSSVISAVKAVNLSERARRR*CSRSRA Trigger: AGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACG...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCGTGCTCGTCGTCGCTaGTGCAGCCGCTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: HVLMTKQSETPHEEVYCQRARRR*CSRSRA Trigger: AGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACG...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GCTGACCGCCAACCGTGGTCAACACTGGTCTTGGGTTTAGGCGGGGTGGCATGGGCTAGTTTACGAGCCTaGCGATCCATCAAACTTGTC | + |
Preference number: 4 (lower is better) Translates to: ADRQPWSTLVLGLGGVAWASLRA*RSIKLV Trigger: GACAAGTTTGATGGATCGCCAGGCTCGTAAACTAGC...CCATGCCACCCCGCCTAAACCCAAGACCAGTGTTGACCACGGTTGGCGGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCGCCACCACGTCCTCCTaGGTTAGATACATGCCCTTA | + |
Preference number: 4 (lower is better) Translates to: GGQTEASCCVTPLTLVHRATTSS*VRYMPL Trigger: TAAGGGCATGTATCTAACCCAGGAGGACGTGGTGGC...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTGGAGGAGGTTGTCGGTaGAGAGCAGGGGCGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPGGGCR*RAGAAG Trigger: GCCTGCCGCCCCTGCTCTTCACCGACAACCTCCTCC...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTGTGGAGGAGGCTGATTaGGAGTTGGCCGGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: RLYCRSTDERQDDESCHGVEEAD*ELAGAG Trigger: TCCAGCCCCGGCCAACTCTCAATCAGCCTCCTCCAC...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTAGAGGTGGAGGAGGCTaGTTGAGAGTTGGCCGGGGC | + |
Preference number: 4 (lower is better) Translates to: RLYCRSTDERQDDESCHGRGGGG*LRVGRG Trigger: GCCCCGGCCAACTCTCAATCAGCCTCCTCCACCTCT...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDARRRC*SRSRAP Trigger: CGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGC...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | CGGAAAGGGCGTGAAGTTAGGGAGGTCCGCAAGGGACTTCTCAATGTTGTGTTTATCCCAACATCCCCGTaGTCGTCGTCGCTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: RKGREVREVRKGLLNVVFIPTSP*SSSLLQ Trigger: CTGCAGCAGCGACGACGAGCACGGGGATGTTGGGAT...AAACACAACATTGAGAAGTCCCTTGCGGACCTCCCTAACTTCACGCCCTTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | CACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCATGGCTGCGTTGGGGCTaGAGGAGACAGCCACCACGT | + |
Preference number: 4 (lower is better) Translates to: HFRSARTRSWHVLMTKQSWLRWG*RRQPPR Trigger: ACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA...TGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCAGGATGGTGTTGGCTaGGTTGGGGCTGCAGGAGAC | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLQDGVG*VGAAGD Trigger: GTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTG...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACATGAACCGAGCCTGCTaGTGGAGTGGAGGAGGTTGT | + |
Preference number: 4 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHMNRAC*WSGGGC Trigger: ACAACCTCCTCCACTCCAGCAGCAGGCTCGGTTCAT...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AGGCAGTGTTGGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGACTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTC | + |
Preference number: 4 (lower is better) Translates to: RQCWTKKWWRLVQSGNGDSGIRA*YSAPTL Trigger: GAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGA...GTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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CDS-3UTR CCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCTGGTGTTGGCTGCGTTaGGGCTGCAGGAGACAGCCA | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLWCWLR*GCRRQP Trigger: TGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCA...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | TCCTCCCCTAAAGCAGAAGCATCAGCATTAGAAGCCTGGGTTCCTTGTTCTGCTGCCTCAGGATGGTGTTaGCTGCGTTGGGGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: SSPKAEASALEAWVPCSAASGWC*LRWGCR Trigger: CCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGC...AGCAGAACAAGGAACCCAGGCTTCTAATGCTGATGCTTCTGCTTTAGGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | CACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAATCCCAACATCCCCGTaGTCGTCGTCGCTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: HFRSARTRSWHVLMTKQSIPTSP*SSSLLQ Trigger: CTGCAGCAGCGACGACGAGCACGGGGATGTTGGGAT...TGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | TTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGATCCCAACATCCCCGTaGTCGTCGTCGCTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: FRSARTRSWHVLMTKQSEIPTSP*SSSLLQ Trigger: CTGCAGCAGCGACGACGAGCACGGGGATGTTGGGAT...CTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | TATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCTGGCTGCGTTGGGGCTaGAGGAGACAGCCACCACGT | + |
Preference number: 4 (lower is better) Translates to: YCQPYAHLASPHTPSQHTWLRWG*RRQPPR Trigger: ACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA...GGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GAAGCCTGGGTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTACAGGATGGTGTTGGCTaGGTTGGGGCTGCAGGAGAC | + |
Preference number: 4 (lower is better) Translates to: EAWVPCSASHSCNTSSKLQDGVG*VGAAGD Trigger: GTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTG...TAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | CAGAAGGGCGGGGCGGCTCCTCAGCTCAGATTAGCTCAGATTCCAGACACAAACGTACTTGGTAGCACCTaGATCGAATTCAGGGATCCG | + |
Preference number: 4 (lower is better) Translates to: QKGGAAPQLRLAQIPDTNVLGST*IEFRDP Trigger: CGGATCCCTGAATTCGATCCAGGTGCTACCAAGTAC...GTTTGTGTCTGGAATCTGAGCTAATCTGAGCTGAGGAGCCGCCCCGCCCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCAGTCCGAGGAGCCTGTaGGGTCTGTGCCTTGCACTG | + |
Preference number: 4 (lower is better) Translates to: TFLPMRSQWALERRPNRGSPRSL*GLCLAL Trigger: CAGTGCAAGGCACAGACCCCACAGGCTCCTCGGACT...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACACACCTCAGGCGGTTTaGACTCTTCAATTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHTPQAV*TLQFHL Trigger: AAGGTGGAATTGAAGAGTTCAAACCGCCTGAGGTGT...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
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CDS-3UTR GCA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: LWVLMTLHWNKKALSLCFARRRC*SRSRAP Trigger: CGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGC...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCTATGCCAGAACAACATaGCAAGCGCCTGTTCAACAT | + |
Preference number: 4 (lower is better) Translates to: GGQTEASCCVTPLTLVHRYARTT*QAPVQH Trigger: ATGTTGAACAGGCGCTTGGCATGTTGTTCTGGCATA...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCCCAGGCCGATCTTGCTaGTTTGGACCGGCTGGTCAG | + |
Preference number: 4 (lower is better) Translates to: HEEVYCQPYAHLASPHTPPGRSC*FGPAGQ Trigger: CTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGG...GGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATACACTTCCTCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCCCAGGCCGATCTTGCTaGTTTGGACCGGCTGGTCAG | + |
Preference number: 4 (lower is better) Translates to: YCQPYAHLASPHTPSQHTPGRSC*FGPAGQ Trigger: CTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGG...GGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCTGGTGTTGGCTGCGTTaGGGCTGCAGGAGACAGCCA | + |
Preference number: 4 (lower is better) Translates to: YCQPYAHLASPHTPSQHTWCWLR*GCRRQP Trigger: TGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCA...GGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | CCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAAGCCTCAGGATGGTGTTaGCTGCGTTGGGGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: PLSSVISAVKAVNLSESQASGWC*LRWGCR Trigger: CCTGCAGCCCCAACGCAGCCAACACCATCCTGAGGC...TTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAACCAGTTGCCTCAGGATaGTGTTGGCTGCGTTGGGGC | + |
Preference number: 4 (lower is better) Translates to: GEPLSSVISAVKAVNLSEPVASG*CWLRWG Trigger: GCCCCAACGCAGCCAACACCATCCTGAGGCAACTGG...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | TATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCCCAGTTGCCTCAGGATaGTGTTGGCTGCGTTGGGGC | + |
Preference number: 4 (lower is better) Translates to: YCQPYAHLASPHTPSQHTPVASG*CWLRWG Trigger: GCCCCAACGCAGCCAACACCATCCTGAGGCAACTGG...GGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCAGGCTGATTGAGAGTTaGCCGGGGCTGGATGAACCG | + |
Preference number: 4 (lower is better) Translates to: TFLPMRSQWALERRPNRGRLIES*PGLDEP Trigger: CGGTTCATCCAGCCCCGGCCAACTCTCAATCAGCCT...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACTCATCACTGTCACCCTaGTTGTGTCTATTGGCTAGT | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHSSLSP*LCLLAS Trigger: ACTAGCCAATAGACACAATCAGGGTGACAGTGATGA...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTGGAGGAGGTTGTCGGTaGAGAGCAGGGGCGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: SLWVLMTLHWNKKALSLCGGGCR*RAGAAG Trigger: GCCTGCCGCCCCTGCTCTTCACCGACAACCTCCTCC...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTTGGCTGCGTTGGGGCTaGAGGAGACAGCCACCACGT | + |
Preference number: 4 (lower is better) Translates to: GLVCLVWISQMSTGTMIGWLRWG*RRQPPR Trigger: ACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA...ACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGCTCCATGTCCAGTTaGCTCAGGATGGTGTTGGCT | + |
Preference number: 4 (lower is better) Translates to: QPYAHLASPHTPSQHTTRSSMSS*LRMVLA Trigger: AGCCAACACCATCCTGAGGCAACTGGACATGGAGCT...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCTGCAATTGTCTTATCTaGAAGCATTTGCTGAATCCT | + |
Preference number: 4 (lower is better) Translates to: LASPHTPSQHTTRRAGRLCNCLI*KHLLNP Trigger: AGGATTCAGCAAATGCTTCCAGATAAGACAATTGCA...GAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACCGTTACCCTCTCTTTTaGCTTCTTTCTTTGGGTCGT | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHRYPLF*LLSLGR Trigger: ACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACG...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTAACCGAGCCTGCTGCTaGAGTGGAGGAGGTTGTCGG | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPNRACC*SGGGCR Trigger: CCGACAACCTCCTCCACTCCAGCAGCAGGCTCGGTT...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAAAACCGAGCCTGCTGCTaGAGTGGAGGAGGTTGTCGG | + |
Preference number: 4 (lower is better) Translates to: PLSSVISAVKAVNLSESQNRACC*SGGGCR Trigger: CCGACAACCTCCTCCACTCCAGCAGCAGGCTCGGTT...TTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTGGCCGGGGCTGGATaGACCGAGCCTGCTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: LWVLMTLHWNKKALSLCFLAGAG*TEPAAG Trigger: TCCAGCAGCAGGCTCGGTTCATCCAGCCCCGGCCAA...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTCTGAATCCCAATGAGTaGAGGTGGCTGCTGACCGCC | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPLNPNE*RWLLTA Trigger: GGCGGTCAGCAGCCACCTTCACTCATTGGGATTCAG...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073279.13 |
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CDS-3UTR TCA 90 bp | ATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTGTCAGTGCTCTTCCCTaGCGGCACCTTAGAAGCACT | + |
Preference number: 4 (lower is better) Translates to: MTKQSETPHEEVYCQPYAVSALP*RHLRST Trigger: AGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGAC...AGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR CCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCGTACTTGGTAGCACCTaGATCGAATTCAGGGATCCG | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLVLGST*IEFRDP Trigger: CGGATCCCTGAATTCGATCCAGGTGCTACCAAGTAC...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CCA 90 bp | AGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGCCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: RTRSWHVLMTKQSETPHEPDCVY*LVYEPG Trigger: GCCAGGCTCGTAAACTAGCCAATAGACACAATCAGG...CTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTCCAGGCCGATCTTGCTaGTTTGGACCGGCTGGTCAG | + |
Preference number: 4 (lower is better) Translates to: GLVCLVWISQMSTGTMIGPGRSC*FGPAGQ Trigger: CTGACCAGCCGGTCCAAACCAGCAAGATCGGCCTGG...ACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGGTGTTGGCTGCGTTaGGGCTGCAGGAGACAGCCA | + |
Preference number: 4 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRWCWLR*GCRRQP Trigger: TGGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCA...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | ACATCTCCCACAGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAAGAAGTGGTGGAGGCTaGTTCAGAGTGGCAATGGGG | + |
Preference number: 4 (lower is better) Translates to: TSPTDCTAGLLTRDKTMKRSGGG*FRVAMG Trigger: CCCCATTGCCACTCTGAACCAGCCTCCACCACTTCT...TTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCTGTGGGAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAAAGAAGTGGTGGAGGCTaGTTCAGAGTGGCAATGGGG | + |
Preference number: 4 (lower is better) Translates to: GEPLSSVISAVKAVNLSERSGGG*FRVAMG Trigger: CCCCATTGCCACTCTGAACCAGCCTCCACCACTTCT...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CATCCCTCAGATACAGCACCTAAGCCACAGATACTGAACATCTGGACAGATGCTTGGACGAAGAAGTGGTaGAGGCTGGTTCAGAGTGGC | + |
Preference number: 4 (lower is better) Translates to: HPSDTAPKPQILNIWTDAWTKKW*RLVQSG Trigger: GCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCA...AGCATCTGTCCAGATGTTCAGTATCTGTGGCTTAGGTGCTGTATCTGAGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGGGCGGCAGGCAGTGTTaGACGAAGAAGTGGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRGGRQC*TKKWWR Trigger: CCTCCACCACTTCTTCGTCCAACACTGCCTGCCGCC...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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3UTR CAA 72 bp | GCTGGTCAGCGTTACCCTCTCTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGTTTCCATCCATGGGGT | + |
Preference number: 4 (lower is better) Translates to: AGQRYPLFWLLS*GRSHCRFHPWG Trigger: ACCCCATGGATGGAAACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGCTGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192158.6 |
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CDS-3UTR TCA 90 bp | AGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGTCATCACTGTCACCCTaGTTGTGTCTATTGGCTAGT | + |
Preference number: 4 (lower is better) Translates to: RTRSWHVLMTKQSETPHESSLSP*LCLLAS Trigger: ACTAGCCAATAGACACAATCAGGGTGACAGTGATGA...CTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR TCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCTTTCCATCCATGGGGTaGGCTTCTTCTACGTCATCA | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLFPSMG*ASSTSS Trigger: TGATGACGTAGAAGAAGCTCACCCCATGGATGGAAA...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTAGAGGTGGAGGAGGCTaGTTGAGAGTTGGCCGGGGC | + |
Preference number: 4 (lower is better) Translates to: SLWVLMTLHWNKKALSLCRGGGG*LRVGRG Trigger: GCCCCGGCCAACTCTCAATCAGCCTCCTCCACCTCT...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCGGCTGTGAATCTGTCTaGATCCCAATGAGTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLGCESV*IPMSEG Trigger: ACCTTCACTCATTGGGATTCAGACAGATTCACAGCC...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073279.13 |
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CDS-3UTR TCA 90 bp | TCAGTGCTCTTCCCTGACGGCACCTTAGAAGCACTTTGTGTCTCCTCCCCTAAAACACCTCAGGCGGTTTaGACTCTTCAATTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: SVLFPDGTLEALCVSSPKTPQAV*TLQFHL Trigger: AAGGTGGAATTGAAGAGTTCAAACCGCCTGAGGTGT...TTTAGGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192222.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGCGTGCTCGTCGTCGCTaGTGCAGCCGCTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: KTKPNQTLFVSNTDPLSERARRR*CSRSRA Trigger: AGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACG...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACTCAATGTTGTGTTTATaGCAGAACAACATGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHSMLCL*QNNMPS Trigger: GCTTGGCATGTTGTTCTGGCATAAACACAACATTGA...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTGGCTGCGTTGGGGCTaGAGGAGACAGCCACCACGT | + |
Preference number: 4 (lower is better) Translates to: SLWVLMTLHWNKKALSLCWLRWG*RRQPPR Trigger: ACGTGGTGGCTGTCTCCTGCAGCCCCAACGCAGCCA...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGAGCTCCATGTCCAGTTaGCTCAGGATGGTGTTGGCT | + |
Preference number: 4 (lower is better) Translates to: HVLMTKQSETPHEEVYCQSSMSS*LRMVLA Trigger: AGCCAACACCATCCTGAGGCAACTGGACATGGAGCT...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATTGGATGAACCGAGCCTaGTGCTGGAGTGGAGGAGGT | + |
Preference number: 4 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDWMNRA*CWSGGG Trigger: ACCTCCTCCACTCCAGCAGCAGGCTCGGTTCATCCA...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTC | + |
Preference number: 4 (lower is better) Translates to: HVLMTKQSETPHEEVYCQSGIRA*YSAPTL Trigger: GAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGA...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCTGTCGTTTCCATCCATaGGGTGAGCTTCTTCTACGT | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLCRFHP*GELLLR Trigger: ACGTAGAAGAAGCTCACCCCATGGATGGAAACGACA...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTGAGGCTGGTTCAGAGTaGCAATGGGGACTGTTGGTG | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPEAGSE*QWGLLV Trigger: CACCAACAGTCCCCATTGCCACTCTGAACCAGCCTC...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | TCAGTGCTCTTCCCTGACGGCACCTTAGAAGCACTTTGTGTCTCCTCCCCTAAAGAGACCACACAAGCATaGCTCCATTGTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: SVLFPDGTLEALCVSSPKETTQA*LHCLYL Trigger: CAGATAAAGACAATGGAGGCATGCTTGTGTGGTCTC...TTTAGGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTCAGGATGGTGTTGGCTaGGTTGGGGCTGCAGGAGAC | + |
Preference number: 4 (lower is better) Translates to: SLWVLMTLHWNKKALSLCQDGVG*VGAAGD Trigger: GTCTCCTGCAGCCCCAACGCAGCCAACACCATCCTG...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGTGCACTGCTAGAAGCTaGTCCTCTGTGGTCCAACGG | + |
Preference number: 4 (lower is better) Translates to: VEIIHFRSARTRSWHVLMCTARS*SSVVQR Trigger: CCGTTGGACCACAGAGGAGCAGCTTCTAGCAGTGCA...CATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
||
CDS-3UTR GCA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGAGCCTGTGGGGTCTGTaGCTTGCACTGCTAGAAGCT | + |
Preference number: 4 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRSLWGL*LALLEA Trigger: AGCTTCTAGCAGTGCAAGGCACAGACCCCACAGGCT...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
||
CDS-3UTR CCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTC | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPSGIRA*YSAPTL Trigger: GAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGA...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
||
CDS-3UTR CCA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCGCTAGTTTACGAGCCTaGCGATCCATCAAACTTGTC | + |
Preference number: 4 (lower is better) Translates to: TFLPMRSQWALERRPNRGASLRA*RSIKLV Trigger: GACAAGTTTGATGGATCGCCAGGCTCGTAAACTAGC...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GAAGCCTGGGTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTACCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: EAWVPCSASHSCNTSSKLPDCVY*LVYEPG Trigger: GCCAGGCTCGTAAACTAGCCAATAGACACAATCAGG...TAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCAGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GAAGTGTATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGGCCACCACGTCCTCCTaGGTTAGATACATGCCCTTA | + |
Preference number: 4 (lower is better) Translates to: EVYCQPYAHLASPHTPSQATTSS*VRYMPL Trigger: TAAGGGCATGTATCTAACCCAGGAGGACGTGGTGGC...CTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATACACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
||
CDS-3UTR TCA 90 bp | GTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTAAACCGACGCTCATCACTGTCACCCTaGTTGTGTCTATTGGCTAGT | + |
Preference number: 4 (lower is better) Translates to: VPCSASHSCNTSSKLNRRSSLSP*LCLLAS Trigger: ACTAGCCAATAGACACAATCAGGGTGACAGTGATGA...GCGTCGGTTTAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
||
CDS-3UTR TCA 90 bp | TTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGTTGACTCAGGCGGTTTaGACTCTTCAATTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: FRSARTRSWHVLMTKQSELTQAV*TLQFHL Trigger: AAGGTGGAATTGAAGAGTTCAAACCGCCTGAGTCAA...CTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR TCA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCGGGCATTAATTTTCTaGTTTGACTCAGGCGGTTTG | + |
Preference number: 4 (lower is better) Translates to: TFLPMRSQWALERRPNRGRALIF*FDSGGL Trigger: CAAACCGCCTGAGTCAAATCAGAAAATTAATGCCCG...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
||
CDS-3UTR GCA 90 bp | ACTTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCGAGACCACACAAGCATaGCTCCATTGTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: TFLPMRSQWALERRPNRGETTQA*LHCLYL Trigger: CAGATAAAGACAATGGAGGCATGCTTGTGTGGTCTC...GCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | TTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGGAGACCACACAAGCATaGCTCCATTGTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: FRSARTRSWHVLMTKQSEETTQA*LHCLYL Trigger: CAGATAAAGACAATGGAGGCATGCTTGTGTGGTCTC...CTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GGCGGCTCCTCAGCTCAGATTAGCTCAGATTCCAGACACAAACACACCTCCGCTGCCATGTTTCTCTTTTaGAATGGCGATATATTCATC | + |
Preference number: 4 (lower is better) Translates to: GGSSAQISSDSRHKHTSAAMFLF*NGDIFI Trigger: GATGAATATATCGCCATTGCAAAAGAGAAACATGGC...AGCGGAGGTGTGTTTGTGTCTGGAATCTGAGCTAATCTGAGCTGAGGAGCCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | CACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCATATGCCAGAACAACATaGCAAGCGCCTGTTCAACAT | + |
Preference number: 4 (lower is better) Translates to: HFRSARTRSWHVLMTKQSYARTT*QAPVQH Trigger: ATGTTGAACAGGCGCTTGGCATGTTGTTCTGGCATA...TGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GTCTCCTCCCCTAAAGCAGAAGCATCAGCATTAGAAGCCTGGGTTCCTTGTTCTTATGCCAGAACAACATaGCAAGCGCCTGTTCAACAT | + |
Preference number: 4 (lower is better) Translates to: VSSPKAEASALEAWVPCSYARTT*QAPVQH Trigger: ATGTTGAACAGGCGCTTGGCATGTTGTTCTGGCATA...AGAACAAGGAACCCAGGCTTCTAATGCTGATGCTTCTGCTTTAGGGGAGGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGCTCCATGTCCAGTTaGCTCAGGATGGTGTTGGCT | + |
Preference number: 4 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDSSMSS*LRMVLA Trigger: AGCCAACACCATCCTGAGGCAACTGGACATGGAGCT...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | AAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTATATTTGCGGACACCTTaGACTGCTAGAAGCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: KQSETPHEEVYCQPYAHLYLRTP*TARSCS Trigger: GGAGCAGCTTCTAGCAGTGCAAGGTGTCCGCAAATA...TAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR CCA 90 bp | CCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAAGTACTTGGTAGCACCTaGATCGAATTCAGGGATCCG | + |
Preference number: 4 (lower is better) Translates to: PLSSVISAVKAVNLSESQVLGST*IEFRDP Trigger: CGGATCCCTGAATTCGATCCAGGTGCTACCAAGTAC...TTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CCA 90 bp | ATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGGCTAGTTTACGAGCCTaGCGATCCATCAAACTTGTC | + |
Preference number: 4 (lower is better) Translates to: IHFRSARTRSWHVLMTKQASLRA*RSIKLV Trigger: GACAAGTTTGATGGATCGCCAGGCTCGTAAACTAGC...CTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TGGGTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTAAACCGAGCTAGTTTACGAGCCTaGCGATCCATCAAACTTGTC | + |
Preference number: 4 (lower is better) Translates to: WVPCSASHSCNTSSKLNRASLRA*RSIKLV Trigger: GACAAGTTTGATGGATCGCCAGGCTCGTAAACTAGC...TCGGTTTAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | ACATCTCCCACAGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAACCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: TSPTDCTAGLLTRDKTMKPDCVY*LVYEPG Trigger: GCCAGGCTCGTAAACTAGCCAATAGACACAATCAGG...TTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCTGTGGGAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGTGTCGTTTCCATCCATaGGGTGAGCTTCTTCTACGT | + |
Preference number: 4 (lower is better) Translates to: HVLMTKQSETPHEEVYCQCRFHP*GELLLR Trigger: ACGTAGAAGAAGCTCACCCCATGGATGGAAACGACA...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATAGTCCGAGGAGCCTGTaGGGTCTGTGCCTCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: KSNHKLRLVERIIQMYSDSPRSL*GLCLRR Trigger: CCGCCTGAGGCACAGACCCCACAGGCTCCTCGGACT...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073279.13 |
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CDS-3UTR CCA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATAGAGTTGGCCGGGGCTaGATGAACCGAGCCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDRVGRG*MNRACC Trigger: GCAGCAGGCTCGGTTCATCCAGCCCCGGCCAACTCT...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAGCTAGTCCTTCAGCATTAGAAGCCTaGGTTCCTTGTTCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: ETPHEEVYCQPYAHLASPSALEA*VPCSAS Trigger: GGAAGCAGAACAAGGAACCCAGGCTTCTAATGCTGA...AGGACTAGCTAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR GCA 90 bp | GTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTAAACCGACGCAATCTTTACCATATTTaGGGACACCTCAGGCGGTTT | + |
Preference number: 4 (lower is better) Translates to: VPCSASHSCNTSSKLNRRNLYHI*GHLRRF Trigger: AAACCGCCTGAGGTGTCCGCAAATATGGTAAAGATT...GCGTCGGTTTAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192222.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | CTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTCTGCTTCCCACTCCTaGAATACCTCCTCTAAGTTA | + |
Preference number: 4 (lower is better) Translates to: LSSQRRLTRKCIVSLMLISASHS*NTSSKL Trigger: TAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGA...AATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR CCA 90 bp | TTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTC | + |
Preference number: 4 (lower is better) Translates to: LTVEIIHFRSARTRSWHVSGIRA*YSAPTL Trigger: GAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGA...GACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTCCTGATTGTGTCTATTaGCTAGTTTACGAGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPPDCVY*LVYEPG Trigger: GCCAGGCTCGTAAACTAGCCAATAGACACAATCAGG...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAATGTCGTTTCCATCCATaGGGTGAGCTTCTTCTACGT | + |
Preference number: 4 (lower is better) Translates to: PLSSVISAVKAVNLSESQCRFHP*GELLLR Trigger: ACGTAGAAGAAGCTCACCCCATGGATGGAAACGACA...TTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCGTTACCCTCTCTTTTaGCTTCTTTCTTTGGGTCGT | + |
Preference number: 4 (lower is better) Translates to: HVLMTKQSETPHEEVYCQRYPLF*LLSLGR Trigger: ACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACG...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | ATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCGTTACCCTCTCTTTTaGCTTCTTTCTTTGGGTCGT | + |
Preference number: 4 (lower is better) Translates to: MTKQSETPHEEVYCQPYARYPLF*LLSLGR Trigger: ACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACG...AGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGCCAGTTGCCTCAGGATaGTGTTGGCTGCGTTGGGGC | + |
Preference number: 4 (lower is better) Translates to: KTKPNQTLFVSNTDPLSEPVASG*CWLRWG Trigger: GCCCCAACGCAGCCAACACCATCCTGAGGCAACTGG...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTTCAGAGTGGCAATaGGGACTGTTGGTGTTGGAG | + |
Preference number: 4 (lower is better) Translates to: EGLVCLVWISQMSTGTMIGSEWQ*GLLVLE Trigger: CTCCAACACCAACAGTCCCCATTGCCACTCTGAACC...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTTTGACTCAGGCGGTTTaGACTCTTCAATTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: VCLVWISQMSTGTMIGEPLTQAV*TLQFHL Trigger: AAGGTGGAATTGAAGAGTTCAAACCGCCTGAGTCAA...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCGCCATGTTTCTCTTTTaGAATGGCGATATATTCATC | + |
Preference number: 4 (lower is better) Translates to: FLPMRSQWALERRPNRGLAMFLF*NGDIFI Trigger: GATGAATATATCGCCATTGCAAAAGAGAAACATGGC...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GTCTCCTCCCCTAAAGCAGAAGCATCAGCATTAGAAGCCTGGGTTCCTTGTTCTTCAATGTTGTGTTTATaGCAGAACAACATGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: VSSPKAEASALEAWVPCSSMLCL*QNNMPS Trigger: GCTTGGCATGTTGTTCTGGCATAAACACAACATTGA...AGAACAAGGAACCCAGGCTTCTAATGCTGATGCTTCTGCTTTAGGGGAGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTAGCTCCATGTCCAGTTaGCTCAGGATGGTGTTGGCT | + |
Preference number: 4 (lower is better) Translates to: SLWVLMTLHWNKKALSLCSSMSS*LRMVLA Trigger: AGCCAACACCATCCTGAGGCAACTGGACATGGAGCT...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATTGGATGAACCGAGCCTaGTGCTGGAGTGGAGGAGGT | + |
Preference number: 4 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDWMNRA*CWSGGG Trigger: ACCTCCTCCACTCCAGCAGCAGGCTCGGTTCATCCA...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGGTGGGGTCTGTGCCTTaGACTGCTAGAAGCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: KTKPNQTLFVSNTDPLSEVGSVP*TARSCS Trigger: GGAGCAGCTTCTAGCAGTGCAAGGCACAGACCCCAC...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCGCCACCACGTCCTCCTaGGTTAGATACATGCCCTTA | + |
Preference number: 4 (lower is better) Translates to: LWVLMTLHWNKKALSLCFATTSS*VRYMPL Trigger: TAAGGGCATGTATCTAACCCAGGAGGACGTGGTGGC...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGAGGCTGATTGAGAGTTaGCCGGGGCTGGATGAACCG | + |
Preference number: 4 (lower is better) Translates to: KTKPNQTLFVSNTDPLSERLIES*PGLDEP Trigger: CGGTTCATCCAGCCCCGGCCAACTCTCAATCAGCCT...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATTCATCACTGTCACCCTaGTTGTGTCTATTGGCTAGT | + |
Preference number: 4 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDSSLSP*LCLLAS Trigger: ACTAGCCAATAGACACAATCAGGGTGACAGTGATGA...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATGAGACCACACAAGCATaGCTCCATTGTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDETTQA*LHCLYL Trigger: CAGATAAAGACAATGGAGGCATGCTTGTGTGGTCTC...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTGCCATGTTTCTCTTTTaGAATGGCGATATATTCATC | + |
Preference number: 4 (lower is better) Translates to: RLYCRSTDERQDDESCHGAMFLF*NGDIFI Trigger: GATGAATATATCGCCATTGCAAAAGAGAAACATGGC...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | ATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAATGTTGTGTTTATaGCAGAACAACATGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: IHFRSARTRSWHVLMTKQSMLCL*QNNMPS Trigger: GCTTGGCATGTTGTTCTGGCATAAACACAACATTGA...CTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | GAAGCCTGGGTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTACATTTTCTGCTTAAGTaGACTGTTTACTTGCTTAGC | + |
Preference number: 4 (lower is better) Translates to: EAWVPCSASHSCNTSSKLHFLLK*TVYLLS Trigger: GCTAAGCAAGTAAACAGTGCACTTAAGCAGAAAATG...TAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192222.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATTGCACTGCTAGAAGCTaGTCCTCTGTGGTCCAACGG | + |
Preference number: 4 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDCTARS*SSVVQR Trigger: CCGTTGGACCACAGAGGAGCAGCTTCTAGCAGTGCA...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GAAGTGTATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGAATCTTTACCATATTTaGGGACACCTCAGGCGGTTT | + |
Preference number: 4 (lower is better) Translates to: EVYCQPYAHLASPHTPSQNLYHI*GHLRRF Trigger: AAACCGCCTGAGGTGTCCGCAAATATGGTAAAGATT...CTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATACACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGATATATTCATCCAATTTaGCATCTGGGATACTGTGAT | + |
Preference number: 4 (lower is better) Translates to: QPYAHLASPHTPSQHTTRYIHPI*HLGYCD Trigger: ATCACAGTATCCCAGATGCCAAATTGGATGAATATA...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCTGTCGTTTCCATCCATaGGGTGAGCTTCTTCTACGT | + |
Preference number: 4 (lower is better) Translates to: LTVEIIHFRSARTRSWHVCRFHP*GELLLR Trigger: ACGTAGAAGAAGCTCACCCCATGGATGGAAACGACA...GACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTGTTGGACGAAGAAGTaGTGGAGGCTGGTTCAGAGT | + |
Preference number: 4 (lower is better) Translates to: LWVLMTLHWNKKALSLCFCWTKK*WRLVQS Trigger: ACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACA...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | TTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCGGGCATTAATTTTCTaGTTTGACTCAGGCGGTTTG | + |
Preference number: 4 (lower is better) Translates to: LTVEIIHFRSARTRSWHVRALIF*FDSGGL Trigger: CAAACCGCCTGAGTCAAATCAGAAAATTAATGCCCG...GACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR GCA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGGCCATGTTTCTCTTTTaGAATGGCGATATATTCATC | + |
Preference number: 4 (lower is better) Translates to: HVLMTKQSETPHEEVYCQAMFLF*NGDIFI Trigger: GATGAATATATCGCCATTGCAAAAGAGAAACATGGC...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | CATCCCTCAGATACAGCACCTAAGCCACAGATACTGAACATCTGGACAGATGCTCATTTTCTGCTTAAGTaGACTGTTTACTTGCTTAGC | + |
Preference number: 4 (lower is better) Translates to: HPSDTAPKPQILNIWTDAHFLLK*TVYLLS Trigger: GCTAAGCAAGTAAACAGTGCACTTAAGCAGAAAATG...AGCATCTGTCCAGATGTTCAGTATCTGTGGCTTAGGTGCTGTATCTGAGGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | TATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCCATTTTCTGCTTAAGTaGACTGTTTACTTGCTTAGC | + |
Preference number: 4 (lower is better) Translates to: YCQPYAHLASPHTPSQHTHFLLK*TVYLLS Trigger: GCTAAGCAAGTAAACAGTGCACTTAAGCAGAAAATG...GGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | ATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGCATTTTCTGCTTAAGTaGACTGTTTACTTGCTTAGC | + |
Preference number: 4 (lower is better) Translates to: IHFRSARTRSWHVLMTKQHFLLK*TVYLLS Trigger: GCTAAGCAAGTAAACAGTGCACTTAAGCAGAAAATG...CTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR GCA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCATGAACCGAGCCTGCTaGTGGAGTGGAGGAGGTTGT | + |
Preference number: 4 (lower is better) Translates to: TLHWNKKALSLCFFIKTIMNRAC*WSGGGC Trigger: ACAACCTCCTCCACTCCAGCAGCAGGCTCGGTTCAT...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | CTAAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTC | + |
Preference number: 4 (lower is better) Translates to: LNQTTSSGWLKGSYKCIQSGIRA*YSAPTL Trigger: GAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGA...CTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CCA 90 bp | TTTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTTATATTCATCCAATTTaGCATCTGGGATACTGTGAT | + |
Preference number: 4 (lower is better) Translates to: FSSHEITVGTRKEAKQRPYIHPI*HLGYCD Trigger: ATCACAGTATCCCAGATGCCAAATTGGATGAATATA...AGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GAAGCCTGGGTTCCTTGTTCTGCTTCCCACTCCTGCAATACCTCCTCTAAGTTATATATTCATCCAATTTaGCATCTGGGATACTGTGAT | + |
Preference number: 4 (lower is better) Translates to: EAWVPCSASHSCNTSSKLYIHPI*HLGYCD Trigger: ATCACAGTATCCCAGATGCCAAATTGGATGAATATA...TAACTTAGAGGAGGTATTGCAGGAGTGGGAAGCAGAACAAGGAACCCAGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | GAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAGCTAGTCCTTGCAATTGTCTTATCTaGAAGCATTTGCTGAATCCT | + |
Preference number: 4 (lower is better) Translates to: ETPHEEVYCQPYAHLASPCNCLI*KHLLNP Trigger: AGGATTCAGCAAATGCTTCCAGATAAGACAATTGCA...AGGACTAGCTAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CCA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATGGTTCAGAGTGGCAATaGGGACTGTTGGTGTTGGAG | + |
Preference number: 4 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDGSEWQ*GLLVLE Trigger: CTCCAACACCAACAGTCCCCATTGCCACTCTGAACC...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR TCA 90 bp | CTAAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGGTGCCTCAGGCGGTTTaGACTCTTCAATTCCACCTT | + |
Preference number: 4 (lower is better) Translates to: LNQTTSSGWLKGSYKCIQVPQAV*TLQFHL Trigger: AAGGTGGAATTGAAGAGTTCAAACCGCCTGAGGCAC...CTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073279.13 |
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CDS-3UTR CCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTACTTGGTAGCACCTaGATCGAATTCAGGGATCCG | + |
Preference number: 4 (lower is better) Translates to: KSNHKLRLVERIIQMYSDVLGST*IEFRDP Trigger: CGGATCCCTGAATTCGATCCAGGTGCTACCAAGTAC...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CCA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATTGCAATTGTCTTATCTaGAAGCATTTGCTGAATCCT | + |
Preference number: 4 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDCNCLI*KHLLNP Trigger: AGGATTCAGCAAATGCTTCCAGATAAGACAATTGCA...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | GTAAACAGCTTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCAAGAAGTTCTTCACTTaGCCAACAGTCTTGTTGCCA | + |
Preference number: 4 (lower is better) Translates to: VNSLTVEIIHFRSARTRSKKFFT*PTVLLP Trigger: TGGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTT...GCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAAGCTGTTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR GCA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTCAATGTTGTGTTTATaGCAGAACAACATGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: LWVLMTLHWNKKALSLCFSMLCL*QNNMPS Trigger: GCTTGGCATGTTGTTCTGGCATAAACACAACATTGA...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | GTAAACAGCTTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCAATCTTTACCATATTTaGGGACACCTTGCACTGCTA | + |
Preference number: 4 (lower is better) Translates to: VNSLTVEIIHFRSARTRSNLYHI*GHLALL Trigger: TAGCAGTGCAAGGTGTCCGCAAATATGGTAAAGATT...GCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAAGCTGTTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR CCA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATATGCAATTGTCTTATCTaGAAGCATTTGCTGAATCCT | + |
Preference number: 4 (lower is better) Translates to: EGLVCLVWISQMSTGTMICNCLI*KHLLNP Trigger: AGGATTCAGCAAATGCTTCCAGATAAGACAATTGCA...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR GCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGAGACCACACAAGCATaGCTCCATTGTCTTTATCTG | + |
Preference number: 4 (lower is better) Translates to: KSNHKLRLVERIIQMYSDETTQA*LHCLYL Trigger: CAGATAAAGACAATGGAGGCATGCTTGTGTGGTCTC...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCTATGCCAGAACAACATaGCAAGCGCCTGTTCAACAT | + |
Preference number: 4 (lower is better) Translates to: TLHWNKKALSLCFFIKTIYARTT*QAPVQH Trigger: ATGTTGAACAGGCGCTTGGCATGTTGTTCTGGCATA...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATCGTTACCCTCTCTTTTaGCTTCTTTCTTTGGGTCGT | + |
Preference number: 4 (lower is better) Translates to: KSNHKLRLVERIIQMYSDRYPLF*LLSLGR Trigger: ACGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACG...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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3UTR CAA 72 bp | GACTTAGCCCTAAATCAAACCACAAGCTCAGGTTGGTaGAAAGGATCATACAAATGTATTCAGATGTTCAAC | + |
Preference number: 4 (lower is better) Translates to: DLALNQTTSSGW*KGSYKCIQMFN Trigger: GTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAGGGCTAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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3UTR CAA 72 bp | GCCATAGTAAAATATTCTTTGTGGGTGCTAATGACTTaGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: AIVKYSLWVLMT*HWNKKALSLCF Trigger: GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGAATATTTTACTATGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR GCA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCCATTTTCTGCTTAAGTaGACTGTTTACTTGCTTAGC | + |
Preference number: 4 (lower is better) Translates to: TLHWNKKALSLCFFIKTIHFLLK*TVYLLS Trigger: GCTAAGCAAGTAAACAGTGCACTTAAGCAGAAAATG...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CCA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGTATATTCATCCAATTTaGCATCTGGGATACTGTGAT | + |
Preference number: 4 (lower is better) Translates to: KTKPNQTLFVSNTDPLSEYIHPI*HLGYCD Trigger: ATCACAGTATCCCAGATGCCAAATTGGATGAATATA...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS GCA 90 bp | CCGTGCTCGTCGTCGCTGCTGCAGCCGCTCTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAGGAGCCGCCGCCTCCCGCCGGGCTC | + |
Preference number: 5 (lower is better) Translates to: PCSSSLLQPLSGSEK*SPPLAEEPPPPAGL Trigger: GAGCCCGGCGGGAGGCGGCGGCTCCTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS CCA 90 bp | GCAGCCCGCCGTTGGCCGAGGAGCCGCCGCCTCCCGCCGGGCTCTTaGCGCCGCCGTTGGCCGATCGGCTCTTCCCCAGTAACTCGGGCC | + |
Preference number: 5 (lower is better) Translates to: AARRWPRSRRLPPGS*RRRWPIGSSPVTRA Trigger: GGCCCGAGTTACTGGGGAAGAGCCGATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGGCGGCGGCTCCTCGGCCAACGGCGGGCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS GCA 90 bp | CAGCTCCGACTCTCATCCCAACATCCCCGTGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCGAGAAGTGCAGCCCGCCGTTGGCCG | + |
Preference number: 5 (lower is better) Translates to: QLRLSSQHPRARRRC*SRSRAPRSAARRWP Trigger: CGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACGGGGATGTTGGGATGAGAGTCGGAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS-3UTR CAA 90 bp | GGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCCTCCCGCCGGGCTCTaGGCGCCGCCGTTGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: GGQTEASCCVTPLTLVHRPPAGL*APPLAD Trigger: ATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGG...GCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | AGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGCCTCCCGCCGGGCTCTaGGCGCCGCCGTTGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: RTRSWHVLMTKQSETPHEPPAGL*APPLAD Trigger: ATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGG...CTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCCTCTTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCT | + |
Preference number: 5 (lower is better) Translates to: ASPHTPSQHTTRRAGRLLFRDPS*VFSSDS Trigger: AGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAA...GAGGAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GCTGACCGCCAACCGTGGTCAACACTGGTCTTGGGTTTAGGCGGGGTGGCATGGCAGCTCCATGTCCAGTaGCCTCAGGATGGTGTTGGC | + |
Preference number: 5 (lower is better) Translates to: ADRQPWSTLVLGLGGVAWQLHVQ*PQDGVG Trigger: GCCAACACCATCCTGAGGCAACTGGACATGGAGCTG...CCATGCCACCCCGCCTAAACCCAAGACCAGTGTTGACCACGGTTGGCGGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | CTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTCCTCCCGCCGGGCTCTaGGCGCCGCCGTTGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: LSSQRRLTRKCIVSLMLIPPAGL*APPLAD Trigger: ATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGG...AATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTCCTCCCGCCGGGCTCTaGGCGCCGCCGTTGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: VCLVWISQMSTGTMIGEPPPAGL*APPLAD Trigger: ATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGG...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | GGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTCCTCCCGCCGGGCTCTaGGCGCCGCCGTTGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: GLVCLVWISQMSTGTMIGPPAGL*APPLAD Trigger: ATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGG...ACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: QPYAHLASPHTPSQHTTRMVLAA*GLQETA Trigger: GGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCAT...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCCTCAAGTGCACTGTTTACTaGCTTAGCATTCTGAACCTG | + |
Preference number: 5 (lower is better) Translates to: ASPHTPSQHTTRRAGRLLKCTVY*LSILNL Trigger: CAGGTTCAGAATGCTAAGCAAGTAAACAGTGCACTT...GAGGAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | TTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAGGGCGGGGCGGCTCTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGT | + |
Preference number: 5 (lower is better) Translates to: LASPHTPSQHTTRRAGRLFWLLS*GRSHCR Trigger: ACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAA...GAGCCGCCCCGCCCTTCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
||
CDS-3UTR CAA 90 bp | CACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: HFRSARTRSWHVLMTKQSMVLAA*GLQETA Trigger: GGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCAT...TGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
||
CDS-3UTR CAA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTTGCCTCAGGATGGTGTaGGCTGCGTTGGGGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: RLYCRSTDERQDDESCHGCLRMV*AALGLQ Trigger: CTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCA...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | GGCCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACTGTGCCTCAGGCGGTTaGAACTCTTCAATTCCACCT | + |
Preference number: 5 (lower is better) Translates to: GQTEASCCVTPLTLVHRHCASGG*NSSIPP Trigger: AGGTGGAATTGAAGAGTTCAAACCGCCTGAGGCACA...GTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073279.13 |
||
CDS-3UTR CAA 90 bp | AGACTGTACTGCAGGTCTACTGACGAGAGACAAGACGATGAAAGCTGTCACGGTGGGCGGCAGGCAGTGTaGGACGAAGAAGTGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: RLYCRSTDERQDDESCHGGRQAV*DEEVVE Trigger: CTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCC...ACCGTGACAGCTTTCATCGTCTTGTCTCTCGTCAGTAGACCTGCAGTACAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS CCA 90 bp | TCTGTGTACTTGGTAGCACCTGGATCGAATTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTCATCCCAACATCCCCGTGCTCGTCG | + |
Preference number: 5 (lower is better) Translates to: SVYLVAPGSNSGIRA*YSAPTLIPTSPCSS Trigger: CGACGAGCACGGGGATGTTGGGATGAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAATTCGATCCAGGTGCTACCAAGTACACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS-3UTR CAA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGTGCCTCAGGATGGTGTaGGCTGCGTTGGGGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: HVLMTKQSETPHEEVYCQCLRMV*AALGLQ Trigger: CTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCA...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
||
CDS-3UTR CAA 90 bp | ATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCCTGCTGTGTCACACTGGCAATGGGGACTGTaGGTGTTGGAGTGGATGATG | + |
Preference number: 5 (lower is better) Translates to: ITVGTRKEAKQRPPAVSHWQWGL*VLEWMM Trigger: CATCATCCACTCCAACACCAACAGTCCCCATTGCCA...GTGTGACACAGCAGGAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTGGGCGGCAGGCAGTGTaGGACGAAGAAGTGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: VCLVWISQMSTGTMIGEPGRQAV*DEEVVE Trigger: CTCCACCACTTCTTCGTCCAACACTGCCTGCCGCCC...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
||
CDS-3UTR CAA 90 bp | TTTCTTCCCATGAGATCACAGTGGGCACTAGAAAGGAGGCCAAACAGAGGCCTCTTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCT | + |
Preference number: 5 (lower is better) Translates to: FLPMRSQWALERRPNRGLFRDPS*VFSSDS Trigger: AGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAA...GAGGCCTCTGTTTGGCCTCCTTTCTAGTGCCCACTGTGATCTCATGGGAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | AGGCAGTGTTGGACGAAGAAGTGGTGGAGGCTGGTTCAGAGTGGCAATGGGGACAAATCTTTACCATATTaGCGGACACCTCAGGCGGTT | + |
Preference number: 5 (lower is better) Translates to: RQCWTKKWWRLVQSGNGDKSLPY*RTPQAV Trigger: AACCGCCTGAGGTGTCCGCAAATATGGTAAAGATTT...GTCCCCATTGCCACTCTGAACCAGCCTCCACCACTTCTTCGTCCAACACTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192222.6 |
||
CDS-3UTR CAA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACACAAGCATGCCTCCATaGTCTTTATCTGTGTACTTG | + |
Preference number: 5 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHTSMPP*SLSVYL Trigger: CAAGTACACAGATAAAGACAATGGAGGCATGCTTGT...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | CCAAACAGAGGCCTCCTGCTGTGTCACACCACTTACACTAGTCCACCGCCACACCTTATCTGGAAGCATTaGCTGAATCCTGTGAAAGCT | + |
Preference number: 5 (lower is better) Translates to: PNRGLLLCHTTYTSPPPHLIWKH*LNPVKA Trigger: AGCTTTCACAGGATTCAGCAAATGCTTCCAGATAAG...GTGTGGCGGTGGACTAGTGTAAGTGGTGTGACACAGCAGGAGGCCTCTGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | CAGAAGGGCGGGGCGGCTCCTCAGCTCAGATTAGCTCAGATTCCAGACACAAACCTTATCTGGAAGCATTaGCTGAATCCTGTGAAAGCT | + |
Preference number: 5 (lower is better) Translates to: QKGGAAPQLRLAQIPDTNLIWKH*LNPVKA Trigger: AGCTTTCACAGGATTCAGCAAATGCTTCCAGATAAG...GTTTGTGTCTGGAATCTGAGCTAATCTGAGCTGAGGAGCCGCCCCGCCCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAGCGTTACCCTCTCTTTaGGCTTCTTTCTTTGGGTCG | + |
Preference number: 5 (lower is better) Translates to: QPYAHLASPHTPSQHTTRALPSL*ASFFGS Trigger: CGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGC...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | AAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTACAGCTCCATGTCCAGTaGCCTCAGGATGGTGTTGGC | + |
Preference number: 5 (lower is better) Translates to: KQSETPHEEVYCQPYAHLQLHVQ*PQDGVG Trigger: GCCAACACCATCCTGAGGCAACTGGACATGGAGCTG...TAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | CTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCT | + |
Preference number: 5 (lower is better) Translates to: LSSQRRLTRKCIVSLMLIFRDPS*VFSSDS Trigger: AGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAA...AATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | CACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGACTAAGCAGTCAGCGTTACCCTCTCTTTaGGCTTCTTTCTTTGGGTCG | + |
Preference number: 5 (lower is better) Translates to: HFRSARTRSWHVLMTKQSALPSL*ASFFGS Trigger: CGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGC...TGACTGCTTAGTCATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | TCTTTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: SLWVLMTLHWNKKALSLCMVLAA*GLQETA Trigger: GGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCAT...ACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | GTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCCTTATGCAGCTCCATGTCCAGTaGCCTCAGGATGGTGTTGGC | + |
Preference number: 5 (lower is better) Translates to: VEIIHFRSARTRSWHVLMQLHVQ*PQDGVG Trigger: GCCAACACCATCCTGAGGCAACTGGACATGGAGCTG...CATAAGGACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGTGAGCCTTGGCAATGGGGACTGTaGGTGTTGGAGTGGATGATG | + |
Preference number: 5 (lower is better) Translates to: VCLVWISQMSTGTMIGEPWQWGL*VLEWMM Trigger: CATCATCCACTCCAACACCAACAGTCCCCATTGCCA...AGGCTCACCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAAATCTTTACCATATTaGCGGACACCTCAGGCGGTT | + |
Preference number: 5 (lower is better) Translates to: QPYAHLASPHTPSQHTTRKSLPY*RTPQAV Trigger: AACCGCCTGAGGTGTCCGCAAATATGGTAAAGATTT...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATTTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCT | + |
Preference number: 5 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDFRDPS*VFSSDS Trigger: AGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAA...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAACAAGCATGCCTCCATaGTCTTTATCTGTGTACTTG | + |
Preference number: 5 (lower is better) Translates to: QPYAHLASPHTPSQHTTRTSMPP*SLSVYL Trigger: CAAGTACACAGATAAAGACAATGGAGGCATGCTTGT...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | TCAGTGCTCTTCCCTGACGGCACCTTAGAAGCACTTTGTGTCTCCTCCCCTAAAACAAGCATGCCTCCATaGTCTTTATCTGTGTACTTG | + |
Preference number: 5 (lower is better) Translates to: SVLFPDGTLEALCVSSPKTSMPP*SLSVYL Trigger: CAAGTACACAGATAAAGACAATGGAGGCATGCTTGT...TTTAGGGGAGGAGACACAAAGTGCTTCTAAGGTGCCGTCAGGGAAGAGCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | AGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATGTTCAACAGAGATATGGTGTTGGCTGCGTaGGGGCTGCAGGAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: SSGWLKGSYKCIQMFNRDMVLAA*GLQETA Trigger: GGCTGTCTCCTGCAGCCCCAACGCAGCCAACACCAT...ATCTCTGTTGAACATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | CTAAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGTGCCTCAGGATGGTGTaGGCTGCGTTGGGGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: LNQTTSSGWLKGSYKCIQCLRMV*AALGLQ Trigger: CTGCAGCCCCAACGCAGCCAACACCATCCTGAGGCA...CTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | CAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCTCACAGCACACCACCAGAAAATCTTTACCATATTaGCGGACACCTTGCACTGCT | + |
Preference number: 5 (lower is better) Translates to: QPYAHLASPHTPSQHTTRKSLPY*RTPCTA Trigger: AGCAGTGCAAGGTGTCCGCAAATATGGTAAAGATTT...TCTGGTGGTGTGCTGTGAGGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR CAA 90 bp | GTCTCCTCCCCTAAAGCAGAAGCATCAGCATTAGAAGCCTGGGTTCCTTGTTCTAGGGACTTCTCAATGTaGTGTTTATGCCAGAACAAC | + |
Preference number: 5 (lower is better) Translates to: VSSPKAEASALEAWVPCSRDFSM*CLCQNN Trigger: GTTGTTCTGGCATAAACACAACATTGAGAAGTCCCT...AGAACAAGGAACCCAGGCTTCTAATGCTGATGCTTCTGCTTTAGGGGAGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | CTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGT | + |
Preference number: 5 (lower is better) Translates to: LSSQRRLTRKCIVSLMLIFWLLS*GRSHCR Trigger: ACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAA...AATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | CAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAGCTACTTGGCCAACAGTCTaGTTGCCAATTACATCTGCA | + |
Preference number: 5 (lower is better) Translates to: QSETPHEEVYCQPYAHLATWPTV*LPITSA Trigger: TGCAGATGTAATTGGCAACAAGACTGTTGGCCAAGT...AGCTAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS-3UTR CAA 90 bp | CACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAGCTAGTCCTCACACACCCCTTATCTGGAAGCATTaGCTGAATCCTGTGAAAGCT | + |
Preference number: 5 (lower is better) Translates to: HEEVYCQPYAHLASPHTPLIWKH*LNPVKA Trigger: AGCTTTCACAGGATTCAGCAAATGCTTCCAGATAAG...GGGTGTGTGAGGACTAGCTAAATGAGCATAAGGCTGACAATACACTTCCTCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGCGTTACCCTCTCTTTaGGCTTCTTTCTTTGGGTCG | + |
Preference number: 5 (lower is better) Translates to: EGLVCLVWISQMSTGTMIALPSL*ASFFGS Trigger: CGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGC...TATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | AAAACCAAACCAAACCAAACACTCTTTGTATCAAACACAGATCCTCTTAGTGAGCAGCTCCATGTCCAGTaGCCTCAGGATGGTGTTGGC | + |
Preference number: 5 (lower is better) Translates to: KTKPNQTLFVSNTDPLSEQLHVQ*PQDGVG Trigger: GCCAACACCATCCTGAGGCAACTGGACATGGAGCTG...CTCACTAAGAGGATCTGTGTTTGATACAAAGAGTGTTTGGTTTGGTTTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | GGTGAGCCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAAAAGTGCACTGTTTACTaGCTTAGCATTCTGAACCTG | + |
Preference number: 5 (lower is better) Translates to: GEPLSSVISAVKAVNLSEKCTVY*LSILNL Trigger: CAGGTTCAGAATGCTAAGCAAGTAAACAGTGCACTT...TTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGGCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | CATGTCCTTATGACTAAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGAAGTGCACTGTTTACTaGCTTAGCATTCTGAACCTG | + |
Preference number: 5 (lower is better) Translates to: HVLMTKQSETPHEEVYCQKCTVY*LSILNL Trigger: CAGGTTCAGAATGCTAAGCAAGTAAACAGTGCACTT...CTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTTAGTCATAAGGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | CCTTTGTCCAGCGTAATTAGTGCAGTGAAGGCTGTGAATCTGTCTGAATCCCAAACAAGCATGCCTCCATaGTCTTTATCTGTGTACTTG | + |
Preference number: 5 (lower is better) Translates to: PLSSVISAVKAVNLSESQTSMPP*SLSVYL Trigger: CAAGTACACAGATAAAGACAATGGAGGCATGCTTGT...TTGGGATTCAGACAGATTCACAGCCTTCACTGCACTAATTACGCTGGACAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | AAGCAGTCAGAGACGCCTCACGAGGAAGTGTATTGTCAGCCTTATGCTCATTTAAGGGACTTCTCAATGTaGTGTTTATGCCAGAACAAC | + |
Preference number: 5 (lower is better) Translates to: KQSETPHEEVYCQPYAHLRDFSM*CLCQNN Trigger: GTTGTTCTGGCATAAACACAACATTGAGAAGTCCCT...TAAATGAGCATAAGGCTGACAATACACTTCCTCGTGAGGCGTCTCTGACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192128.6 ENSMUST00000192491.6 |
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CDS-3UTR CAA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGT | + |
Preference number: 5 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDFWLLS*GRSHCR Trigger: ACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAA...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCTGGGGACTGTTGGTGTaGGAGTGGATGATGGGGCAG | + |
Preference number: 5 (lower is better) Translates to: TLHWNKKALSLCFFIKTIWGLLV*EWMMGQ Trigger: CTGCCCCATCATCCACTCCAACACCAACAGTCCCCA...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS CCA 90 bp | TGTAGCCATGTTTCTCTTTTGCAATGGCGATATATTCATCCAATTTaGCATCTGGGATACTGTGATAAGGAGACCACACAAGCATGCCTC | + |
Preference number: 5 (lower is better) Translates to: CSHVSLLQWRYIHPI*HLGYCDKETTQACL Trigger: GAGGCATGCTTGTGTGGTCTCCTTATCACAGTATCCCAGATGCCAAATTGGATGAATATATCGCCATTGCAAAAGAGAAACATGGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS-3UTR CAA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGACAAGCATGCCTCCATaGTCTTTATCTGTGTACTTG | + |
Preference number: 5 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRTSMPP*SLSVYL Trigger: CAAGTACACAGATAAAGACAATGGAGGCATGCTTGT...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | AGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAGGAGGGACTTCTCAATGTaGTGTTTATGCCAGAACAAC | + |
Preference number: 5 (lower is better) Translates to: RTSLPCLDQSDEHWYNDRRDFSM*CLCQNN Trigger: GTTGTTCTGGCATAAACACAACATTGAGAAGTCCCT...CCTATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | GGAAGGACTAGTTTGCCTTGTTTGGATCAGTCAGATGAGCACTGGTACAATGATAAGTGCACTGTTTACTaGCTTAGCATTCTGAACCTG | + |
Preference number: 5 (lower is better) Translates to: GRTSLPCLDQSDEHWYNDKCTVY*LSILNL Trigger: CAGGTTCAGAATGCTAAGCAAGTAAACAGTGCACTT...ATCATTGTACCAGTGCTCATCTGACTGATCCAAACAAGGCAAACTAGTCCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | TTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCATGTCAAAGAAGTTCTTCACTaGGCCAACAGTCTTGTTGCC | + |
Preference number: 5 (lower is better) Translates to: LTVEIIHFRSARTRSWHVKEVLH*ANSLVA Trigger: GGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTTT...GACATGCCAGCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS CCA 90 bp | ATGTTTCTCTTTTGCAATGGCGATATATTCATCCAATTTGGCATCTaGGATACTGTGATAAGGAGACCACACAAGCATGCCTCCATTGTC | + |
Preference number: 5 (lower is better) Translates to: MFLFCNGDIFIQFGI*DTVIRRPHKHASIV Trigger: GACAATGGAGGCATGCTTGTGTGGTCTCCTTATCACAGTATCCCAGATGCCAAATTGGATGAATATATCGCCATTGCAAAAGAGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192491.6 ENSMUST00000192866.6 ENSMUST00000193144.2 |
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CDS-3UTR CAA 90 bp | AAATCAAACCACAAGCTCAGGTTGGTTGAAAGGATCATACAAATGTATTCAGATTTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCT | + |
Preference number: 5 (lower is better) Translates to: KSNHKLRLVERIIQMYSDFRDPS*VFSSDS Trigger: AGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAA...ATCTGAATACATTTGTATGATCCTTTCAACCAACCTGAGCTTGTGGTTTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192158.6 |
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CDS-3UTR CAA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTTTGGCTTCTTTCTTaGGGTCGTAGTCACTGTCGT | + |
Preference number: 5 (lower is better) Translates to: LWVLMTLHWNKKALSLCFFWLLS*GRSHCR Trigger: ACGACAGTGACTACGACCCAAAGAAAGAAGCCAAAA...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | TTGTGGGTGCTAATGACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCAGGGACTTCTCAATGTaGTGTTTATGCCAGAACAAC | + |
Preference number: 5 (lower is better) Translates to: LWVLMTLHWNKKALSLCFRDFSM*CLCQNN Trigger: GTTGTTCTGGCATAAACACAACATTGAGAAGTCCCT...GAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGTCATTAGCACCCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | ACTTTGCATTGGAATAAAAAGGCCTTAAGCCTCTGTTTCTTCATAAAAACGATCGCGTTACCCTCTCTTTaGGCTTCTTTCTTTGGGTCG | + |
Preference number: 5 (lower is better) Translates to: TLHWNKKALSLCFFIKTIALPSL*ASFFGS Trigger: CGACCCAAAGAAAGAAGCCAAAAGAGAGGGTAACGC...GATCGTTTTTATGAAGAAACAGAGGCTTAAGGCCTTTTTATTCCAATGCAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 |
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CDS-3UTR CAA 90 bp | GTAAACAGCTTAACAGTAGAAATAATACACTTTCGCTCTGCTAGGACCAGAAGCTGGCCAACAGTCTTGTaGCCAATTACATCTGCAATA | + |
Preference number: 5 (lower is better) Translates to: VNSLTVEIIHFRSARTRSWPTVL*PITSAI Trigger: TATTGCAGATGTAATTGGCAACAAGACTGTTGGCCA...GCTTCTGGTCCTAGCAGAGCGAAAGTGTATTATTTCTACTGTTAAGCTGTTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192128.6 |
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CDS GCA 90 bp | AAAGAAGTTCTTCACTTGGCCAACAGTCTTGTTGCCAATTACATCTaGAATAGCTTGAAAATCTTTACCATATTTGCGGACACCTTGCAC | + |
Preference number: 5 (lower is better) Translates to: KEVLHLANSLVANYI*NSLKIFTIFADTLH Trigger: GTGCAAGGTGTCCGCAAATATGGTAAAGATTTTCAAGCTATTGCAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAGAACTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192128.6 ENSMUST00000192866.6 ENSMUST00000194750.6 |
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CDS CAA 90 bp | TGCAGCCCGCCGTTGGCCGAGGAGCCGCCGCCTCCCGCCGGGCTCTaGGCGCCGCCGTTGGCCGATCGGCTCTTCCCCAGTAACTCGGGC | + |
Preference number: 6 (lower is better) Translates to: CSPPLAEEPPPPAGL*APPLADRLFPSNSG Trigger: GCCCGAGTTACTGGGGAAGAGCCGATCGGCCAACGGCGGCGCCAAGAGCCCGGCGGGAGGCGGCGGCTCCTCGGCCAACGGCGGGCTGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS GCA 72 bp | TCGTCGCTGCTGCAGCCGCTCTCGGGCTCCGAGAAGTaGAGCCCGCCGTTGGCCGAGGAGCCGCCGCCTCCC | + |
Preference number: 6 (lower is better) Translates to: SSLLQPLSGSEK*SPPLAEEPPPP Trigger: GGGAGGCGGCGGCTCCTCGGCCAACGGCGGGCTGCACTTCTCGGAGCCCGAGAGCGGCTGCAGCAGCGACGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS GCA 72 bp | CTCTCATCCCAACATCCCCGTGCTCGTCGTCGCTGCTaGAGCCGCTCTCGGGCTCCGAGAAGTGCAGCCCGC | + |
Preference number: 6 (lower is better) Translates to: LSSQHPRARRRC*SRSRAPRSAAR Trigger: GCGGGCTGCACTTCTCGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACGGGGATGTTGGGATGAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS GCA 72 bp | CGACTCTCATCCCAACATCCCCGTGCTCGTCGTCGCTaGTGCAGCCGCTCTCGGGCTCCGAGAAGTGCAGCC | + |
Preference number: 6 (lower is better) Translates to: RLSSQHPRARRR*CSRSRAPRSAA Trigger: GGCTGCACTTCTCGGAGCCCGAGAGCGGCTGCAGCAGCGACGACGAGCACGGGGATGTTGGGATGAGAGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS CCA 72 bp | TTGGTAGCACCTGGATCGAATTCAGGGATCCGAGCTTaGTATTCAGCTCCGACTCTCATCCCAACATCCCCG | + |
Preference number: 6 (lower is better) Translates to: LVAPGSNSGIRA*YSAPTLIPTSP Trigger: CGGGGATGTTGGGATGAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAATTCGATCCAGGTGCTACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS CAA 72 bp | CTTGGTAGCACCTGGATCGAATTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCTCATCCCAACATCCCC | + |
Preference number: 6 (lower is better) Translates to: LGSTWIEFRDPS*VFSSDSHPNIP Trigger: GGGGATGTTGGGATGAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAATTCGATCCAGGTGCTACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS CAA 90 bp | ATCTGTGTACTTGGTAGCACCTGGATCGAATTCAGGGATCCGAGCTaGGTATTCAGCTCCGACTCTCATCCCAACATCCCCGTGCTCGTC | + |
Preference number: 6 (lower is better) Translates to: ICVLGSTWIEFRDPS*VFSSDSHPNIPVLV Trigger: GACGAGCACGGGGATGTTGGGATGAGAGTCGGAGCTGAATACCAAGCTCGGATCCCTGAATTCGATCCAGGTGCTACCAAGTACACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192158.6 ENSMUST00000192491.6 ENSMUST00000192866.6 |
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CDS GCA 72 bp | CTTCACTTGGCCAACAGTCTTGTTGCCAATTACATCTaGAATAGCTTGAAAATCTTTACCATATTTGCGGAC | + |
Preference number: 6 (lower is better) Translates to: LHLANSLVANYI*NSLKIFTIFAD Trigger: GTCCGCAAATATGGTAAAGATTTTCAAGCTATTGCAGATGTAATTGGCAACAAGACTGTTGGCCAAGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192128.6 ENSMUST00000192866.6 ENSMUST00000194750.6 |
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CDS CCA 72 bp | GTTTCTCTTTTGCAATGGCGATATATTCATCCAATTTaGCATCTGGGATACTGTGATAAGGAGACCACACAA | + |
Preference number: 6 (lower is better) Translates to: VSLLQWRYIHPI*HLGYCDKETTQ Trigger: TTGTGTGGTCTCCTTATCACAGTATCCCAGATGCCAAATTGGATGAATATATCGCCATTGCAAAAGAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073279.13 ENSMUST00000110849.10 ENSMUST00000192128.6 ENSMUST00000192491.6 ENSMUST00000192866.6 ENSMUST00000193144.2 |