Pregenerated sensors for RCOR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024968Ensembl transcript IDs: ENSMUST00000066646.12, ENSMUST00000113369.3, ENSMUST00000140442.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAGCAGCTTTGGGTATTTaGAAGACCTGGCAAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TPTQRVGPEAKPSAGRQAAALGI*KTWQEP Trigger: GGGCTCTTGCCAGGTCTTTCAAATACCCAAAGCTGC...TGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCGCCAACTGGCAGCTTTaGGTATTTGAAAGACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PQAKVITPTQRVGPEAKPANWQL*VFERPG Trigger: GCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGC...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAACCCATGTCTGTGTAAGTCCCCAACCCTTCTTTCTCCAAACTTTTGGGGGAGAGGCCAAGCCCTCTaGAGGCAGGCAGGCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: INPCLCKSPTLLSPNFWGRGQAL*RQAGKE Trigger: CTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCT...CCCCCAAAAGTTTGGAGAAAGAAGGGTTGGGGACTTACACAGACATGGGTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTGCCAACTGGCAGCTTTaGGTATTTGAAAGACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PNFWGWTKWVSSQLPNILANWQL*VFERPG Trigger: GCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGC...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCAAAAAGAAGGAAAGGTaGATGAGGCCAGCTAACATC | + |
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Preference number: 2 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPKKKER*MRPANI Trigger: GATGTTAGCTGGCCTCATTCACCTTTCCTTCTTTTT...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR TCA 72 bp | CAGTCACAGCCAGGAAGCAAGAGTCCCTGCAGGCCCTaGGATCTAGCCCCTGGCTGGGGGTTTACAAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QSQPGSKSPCRP*DLAPGWGFTSS Trigger: TGAGCTTGTAAACCCCCAGCCAGGGGCTAGATCTCAGGGCCTGCAGGGACTCTTGCTTCCTGGCTGTGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR CCA 72 bp | GAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTaGGTATTTGAAAGACCTGGCAAGAGCCCTAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: EPTGPSCANWQL*VFERPGKSPSP Trigger: GGGACTAGGGCTCTTGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR CCA 72 bp | ACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTaGCAGCTTTGGGTATTTGAAAGACCTGGCAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: THAEPTGPSCAN*QLWVFERPGKS Trigger: GCTCTTGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR CCA 72 bp | ACCCTTCTTTCTCCAAACTTTTGGGGGTGGACAAAGTaGGTCTCCTCACAGCTACCCAACATTCTTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: TLLSPNFWGWTK*VSSQLPNILPT Trigger: GGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGGAGAAAGAAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| 3UTR TCA 72 bp | GCACCTGACTTATTGCTAAAAAGAAGGAAAGGTGAATaGGGCCAGCTAACATCCTGTCCTCTCCCCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: APDLLLKRRKGE*GQLTSCPLPHP Trigger: GGGATGGGGGAGAGGACAGGATGTTAGCTGGCCTCATTCACCTTTCCTTCTTTTTAGCAATAAGTCAGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCCCAGGGCGGGCACTGTaGCGAGAGGCAGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YPHTKGRPRGQALCRQAGPGRAL*REAARA Trigger: TGCCCTGGCTGCCTCTCGCCACAGTGCCCGCCCTGG...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR TCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCACCAGGGCAGGGCGGATaGGCGGTGGTGGAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEAPGQGG*AVVEAG Trigger: ACCAGCCTCCACCACCGCTCATCCGCCCTGCCCTGG...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCCCTCAGCAGCGGGGGTaGCTGGGAAAGCGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YPHTKGRPRGQALCRQAGPQQRG*LGKRGG Trigger: CCCACCTCGCTTTCCCAGCCACCCCCGCTGCTGAGG...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAAGCAGCGGGGGTGGCTaGGAAAGCGAGGTGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEASSGGG*ESEVGG Trigger: ACCGCCCACCTCGCTTTCCCAGCCACCCCCGCTGCT...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAGGCGGAGAGGGTCAATaGCGCCCTCCAGTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEAGGEGQ*RPPVLG Trigger: GCCAAGCACTGGAGGGCGGCATTGACCCTCTCCGCC...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCCAGGAGCCCCTCGCCTaGCCTCTTCCGTGGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PQAKVITPTQRVGPEAKPQEPLA*PLPWGP Trigger: CGGTCCCCACGGAAGAGGCCAGGCGAGGGGCTCCTG...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCTCCAACCAGGGTAGGTaGAGGCTGAGGACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YPHTKGRPRGQALCRQAGSNQGR*RLRTRA Trigger: CGCCCTGGTCCTCAGCCTCCACCTACCCTGGTTGGA...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | ACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCACCCAGCCGCCTGGCCTaGCTGTCCATCACACTAGTT | + |
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Preference number: 4 (lower is better) Translates to: TPTQRVGPEAKPSAGRQAPSRLA*LSITLV Trigger: AACTAGTGTGATGGACAGGCAGGCCAGGCGGCTGGG...TGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | CAGGAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGAGGAAGCGGCCCTGCTaGAGGGGAGGCGGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: QEHMQNPQVQAVPTGSFGRKRPC*RGGGWR Trigger: CCGCCAGCCGCCTCCCCTGCAGCAGGGCCGCTTCCT...CCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCTCCCGGAGCCCGCACTaGGCTTCTCCATTACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPHTKGRPRGQALCRQAGSRSPH*ASPLLR Trigger: CCTCAGTAATGGAGAAGCCCAGTGCGGGCTCCGGGA...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066646.12 |
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| CDS-3UTR CCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCACCGCCCTCCAGTGCTTaGCGGAGGCTGCTATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEAPPSSA*RRLLLV Trigger: GACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGG...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | CAGGAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGGGTGGGCGGTGGAGGTaGGGGCGGTGCAGGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: QEHMQNPQVQAVPTGSFGGGRWR*GRCRGY Trigger: GTACCCCCTGCACCGCCCCCACCTCCACCGCCCACC...CCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | ACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCATCAGGTACATGCCCTTaGGCGGACGTCTCCGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TPTQRVGPEAKPSAGRQASGTCP*ADVSEF Trigger: GAACTCGGAGACGTCCGCCCAAGGGCATGTACCTGA...TGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCTTGTCAGGGAGCATCTaGTGGATCCGCTGGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: YPHTKGRPRGQALCRQAGLSGSI*WIRWKH Trigger: GTGCTTCCAGCGGATCCAGCAGATGCTCCCTGACAA...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | CCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTGGCAAGGAAGCGGCCCTGCTaGAGGGGAGGCGGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PQVQAVPTGSFGYLKDLARKRPC*RGGGWR Trigger: CCGCCAGCCGCCTCCCCTGCAGCAGGGCCGCTTCCT...TGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | CACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCCACCCCAATCCCTGCAGGAAGCGGCCCTaGTGCAGGGGAGGCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HSYPTFFPPDFCHPHPNPCRKRP*CRGGGW Trigger: CCAGCCGCCTCCCCTGCAGCAGGGCCGCTTCCTGCA...GGGATTGGGGTGGGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | CAGGAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGGTGGCTGTCCGCCGTTaGGTGCCGTCTTGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: QEHMQNPQVQAVPTGSFGVAVRR*VPSWPD Trigger: GTCGGGCCAAGACGGCACCCAACGGCGGACAGCCAC...CCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066646.12 |
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| CDS-3UTR CCA 90 bp | TCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGGGCAAGGCCACCCAGCCGCCTaGCCTGCCTGTCCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: SLVLPERSSQRGSGASGQGHPAA*PACPSH Trigger: GTGTGATGGACAGGCAGGCCAGGCGGCTGGGTGGCC...TTGCCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCCAACCAGGGTAGGTaGAGGCTGAGGACCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PQAKVITPTQRVGPEAKPSNQGR*RLRTRA Trigger: CGCCCTGGTCCTCAGCCTCCACCTACCCTGGTTGGA...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR TCA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGGGTAGGTGGAGGCTaGGGACCAGGGCGGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LVPSVLSAAREIQPKGFRRVGGG*GPGRAL Trigger: CAGTGCCCGCCCTGGTCCTCAGCCTCCACCTACCCT...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCCTTGTTGCTATAGCGTaGAGGGCTCTCAGGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: YPHTKGRPRGQALCRQAGLVAIA*RALRLA Trigger: TGCAAGCCTGAGAGCCCTGCACGCTATAGCAACAAG...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAGTGCTTGGCGGAGGCTaGTATTGGTCTGCTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEAVLGGG*YWSASC Trigger: GCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCAC...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | CAGGAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGGGCGGAGAGGGTCAATaGCGCCCTCCAGTGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QEHMQNPQVQAVPTGSFGGGEGQ*RPPVLG Trigger: GCCAAGCACTGGAGGGCGGCATTGACCCTCTCCGCC...CCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGGGCCACCCAGCCGCCTaGCCTGCCTGTCCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: LVPSVLSAAREIQPKGFRGHPAA*PACPSH Trigger: GTGTGATGGACAGGCAGGCCAGGCGGCTGGGTGGCC...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | GACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCGGTGGGCGGTGGAGGTaGGGGCGGTGCAGGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: DKVGLLTATQHSSHQISAGGRWR*GRCRGY Trigger: GTACCCCCTGCACCGCCCCCACCTCCACCGCCCACC...GGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | TTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGCCTCAGCAGCGGGGGTaGCTGGGAAAGCGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGVDKVGLLTATQHSSHQPQQRG*LGKRGG Trigger: CCCACCTCGCTTTCCCAGCCACCCCCGCTGCTGAGG...CTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | CACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCCACCCCAATCCCGTGGTGGAGGCTGGTTaGGGGCCAGCCGAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HSYPTFFPPDFCHPHPNPVVEAG*GPAEAA Trigger: TGCAGCCTCGGCTGGCCCCCAACCAGCCTCCACCAC...GGGATTGGGGTGGGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | ACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCACAGAAGCATGCCGAGTaGCTGCTCAATGTTATAGCC | + |
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Preference number: 4 (lower is better) Translates to: TPTQRVGPEAKPSAGRQAQKHAE*LLNVIA Trigger: GGCTATAACATTGAGCAGGCACTCGGCATGCTTCTG...TGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR GCA 90 bp | GACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCTGCAGGAAGCGGCCCTaGTGCAGGGGAGGCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: DKVGLLTATQHSSHQISACRKRP*CRGGGW Trigger: CCAGCCGCCTCCCCTGCAGCAGGGCCGCTTCCTGCA...GGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAATCTGCTGGATCCGCTaGAAGCACTTGCCATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEAICWIR*KHLPWN Trigger: GTTCCATGGCAAGTGCTTCCAGCGGATCCAGCAGAT...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | GAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATAGCAGCGGGGGTGGCTaGGAAAGCGAGGTGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: EHMQNPQVQAVPTGSFGYSSGGG*ESEVGG Trigger: ACCGCCCACCTCGCTTTCCCAGCCACCCCCGCTGCT...ATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CCA 90 bp | GAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTAGCGGTGGTGGAGGCTaGTTGGGGGCCAGCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: EPTGPSCANWQLWVFERPSGGGG*LGASRG Trigger: GCCTCGGCTGGCCCCCAACCAGCCTCCACCACCGCT...AGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR TCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCCATCAGGGAAGGGAGTaGAGTTGGCTAGGTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PQAKVITPTQRVGPEAKPHQGRE*SWLGQP Trigger: TGGCTGACCTAGCCAACTTCACTCCCTTCCCTGATG...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR TCA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAAAGAGAGATGAGCTGTaGGTCAAGACCTCGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGRPRGQALCRQAGKEAKRDEL*VKTSEC Trigger: ACACTCCGAGGTCTTGACTCACAGCTCATCTCTCTT...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCCTGTCCGCCGTTGGGTaGCGTCTTGGCCCGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPLSAVG*RLGPTS Trigger: CGAAGTCGGGCCAAGACGGCACCCAACGGCGGACAG...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066646.12 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCGTGCATTCAGAGGTCTaGATGGCAGAGGCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQAKVITPTQRVGPEAKPVHSEV*MAEALA Trigger: AGCGAGAGCCTCTGCCATCCAGACCTCTGAATGCAC...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCAGGAGCCCCTCGCCTaGCCTCTTCCGTGGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILQEPLA*PLPWGP Trigger: CGGTCCCCACGGAAGAGGCCAGGCGAGGGGCTCCTG...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTAGCGGTGGTGGAGGCTaGTTGGGGGCCAGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILSGGGG*LGASRG Trigger: GCCTCGGCTGGCCCCCAACCAGCCTCCACCACCGCT...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCAGGGCGGGCACTGTaGCGAGAGGCAGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILPGRAL*REAARA Trigger: TGCCCTGGCTGCCTCTCGCCACAGTGCCCGCCCTGG...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCCGGATCATGCTGTCATaGGAGTGCTCCTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSVLSAAREIQPKGFRSLRIMLS*ECSSSL Trigger: CAGCGAGGAGGAGCACTCTCATGACAGCATGATCCG...GAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066646.12 |
||
| CDS-3UTR TCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTAGGGTAGGTGGAGGCTaGGGACCAGGGCGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILRVGGG*GPGRAL Trigger: CAGTGCCCGCCCTGGTCCTCAGCCTCCACCTACCCT...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCCCTTCAGCTCCTTGTTaGTATAGCGTGCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQAKVITPTQRVGPEAKPPSAPC*YSVQGS Trigger: AGAGCCCTGCACGCTATAGCAACAAGGAGCTGAAGG...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCAATGCCGCCCTCCAGTaGTTGGCGGAGGCTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: PSVLSAAREIQPKGFRSLNAALQ*LAEAAI Trigger: AATAGCAGCCTCCGCCAAGCACTGGAGGGCGGCATT...GAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR TCA 90 bp | ATAAACCCATGTCTGTGTAAGTCCCCAACCCTTCTTTCTCCAAACTTTTGGGGGCCAGGGCAGGGCGGATaGGCGGTGGTGGAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INPCLCKSPTLLSPNFWGPGQGG*AVVEAG Trigger: ACCAGCCTCCACCACCGCTCATCCGCCCTGCCCTGG...CCCCCAAAAGTTTGGAGAAAGAAGGGTTGGGGACTTACACAGACATGGGTTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTTGTCAGGGAGCATCTaGTGGATCCGCTGGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSVLSAAREIQPKGFRSLLSGSI*WIRWKH Trigger: GTGCTTCCAGCGGATCCAGCAGATGCTCCCTGACAA...GAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | GACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCGTCATCCTCCGAGTGTaGCTGTCCGCCGTTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKVGLLTATQHSSHQISAVILRV*LSAVGC Trigger: GCACCCAACGGCGGACAGCCACACTCGGAGGATGAC...GGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066646.12 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGGGCAATCAGGGAGCATCTGCTaGATCCGCTGGAAGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLVLPERSSQRGSGASGQSGSIC*IRWKHL Trigger: CAAGTGCTTCCAGCGGATCCAGCAGATGCTCCCTGA...TTGCCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGGGCAAGGCGGAGGCTGCTATTaGTCTGCTTCATGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVLPERSSQRGSGASGQGGGCY*SASCSG Trigger: TCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCC...TTGCCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | GAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTCCGCCCTCCAGTGCTTaGCGGAGGCTGCTATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTGPSCANWQLWVFERPPPSSA*RRLLLV Trigger: GACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGG...AGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTCATCAGGGAAGGGAGTaGAGTTGGCTAGGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSLVLPERSSQRGSGASHQGRE*SWLGQP Trigger: TGGCTGACCTAGCCAACTTCACTCCCTTCCCTGATG...AGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGCTAAAGTCATTACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCCACATCGTGTTTATaGCACAGAAGCATGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQAKVITPTQRVGPEAKPSTSCL*HRSMPS Trigger: ACTCGGCATGCTTCTGTGGCATAAACACGATGTGGA...GGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTAATGACTTTAGCCTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | GAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTCCCAGCCGCCTGGCCTaGCTGTCCATCACACTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EPTGPSCANWQLWVFERPPSRLA*LSITLV Trigger: AACTAGTGTGATGGACAGGCAGGCCAGGCGGCTGGG...AGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGTGGGCTTCCCGATACTaGAGTGAGGCCTTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LVPSVLSAAREIQPKGFRWASRY*SEAFRT Trigger: AGTCCTGAAGGCCTCACTGCAGTATCGGGAAGCCCA...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGTGCTTGGCGGAGGCTaGTATTGGTCTGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSLVLPERSSQRGSGASVLGGG*YWSASC Trigger: GCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCAC...AGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGTCAGGGAGCATCTGCTaGATCCGCTGGAAGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVDKVGLLTATQHSSHQSGSIC*IRWKHL Trigger: CAAGTGCTTCCAGCGGATCCAGCAGATGCTCCCTGA...CTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCTCAGGTACATGCCCTTaGGCGGACGTCTCCGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPSGTCP*ADVSEF Trigger: GAACTCGGAGACGTCCGCCCAAGGGCATGTACCTGA...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGGCTGCTATTGGTCTaGTTCATGCTCTGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVPSVLSAAREIQPKGFRRLLLV*FMLWTW Trigger: CCAGGTCCAGAGCATGAAGCAGACCAATAGCAGCCT...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTATCTGCTGGATCCGCTaGAAGCACTTGCCATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSLVLPERSSQRGSGASICWIR*KHLPWN Trigger: GTTCCATGGCAAGTGCTTCCAGCGGATCCAGCAGAT...AGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGGTGCATTCAGAGGTCTaGATGGCAGAGGCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HMQNPQVQAVPTGSFGYLVHSEV*MAEALA Trigger: AGCGAGAGCCTCTGCCATCCAGACCTCTGAATGCAC...CAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGGTCTGCTTCATGCTCTaGACCTGGCGCTTAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPSVLSAAREIQPKGFRVCFML*TWRLRE Trigger: CTCTCTTAAGCGCCAGGTCCAGAGCATGAAGCAGAC...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | GAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATGGCGGAGGCTGCTATTaGTCTGCTTCATGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EHMQNPQVQAVPTGSFGYGGGCY*SASCSG Trigger: TCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCC...ATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTGGCACAGGGCTCTCAGGCTTaGACTCCGGAATTACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQVQAVPTGSFGYLKDLAQGSQA*TPELLL Trigger: AAGCAGTAATTCCGGAGTGCAAGCCTGAGAGCCCTG...TGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCCAGGGCTCTCAGGCTTaGACTCCGGAATTACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPQGSQA*TPELLL Trigger: AAGCAGTAATTCCGGAGTGCAAGCCTGAGAGCCCTG...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTGGCACTTGTTGCTATAGCGTaGAGGGCTCTCAGGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVQAVPTGSFGYLKDLALVAIA*RALRLA Trigger: TGCAAGCCTGAGAGCCCTGCACGCTATAGCAACAAG...TGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGTATGCCACAGAAGCATaGCGAGTGCCTGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPSVLSAAREIQPKGFRYATEA*RVPAQC Trigger: ACATTGAGCAGGCACTCGGCATGCTTCTGTGGCATA...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCCACCCCAATCCCTATGCCACAGAAGCATaGCGAGTGCCTGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HSYPTFFPPDFCHPHPNPYATEA*RVPAQC Trigger: ACATTGAGCAGGCACTCGGCATGCTTCTGTGGCATA...GGGATTGGGGTGGGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATTTGAAAGACCTGGCAGTCTGCTTCATGCTCTaGACCTGGCGCTTAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQVQAVPTGSFGYLKDLAVCFML*TWRLRE Trigger: CTCTCTTAAGCGCCAGGTCCAGAGCATGAAGCAGAC...TGCCAGGTCTTTCAAATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTATTCAGAGGTCTGGATaGCAGAGGCTCTCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILIQRSG*QRLSLG Trigger: CCCAAGCGAGAGCCTCTGCCATCCAGACCTCTGAAT...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR TCA 90 bp | GACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCAAGAGAGATGAGCTGTaGGTCAAGACCTCGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVGLLTATQHSSHQISAKRDEL*VKTSEC Trigger: ACACTCCGAGGTCTTGACTCACAGCTCATCTCTCTT...GGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCTTCAGCTCCTTGTTaGTATAGCGTGCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILPSAPC*YSVQGS Trigger: AGAGCCCTGCACGCTATAGCAACAAGGAGCTGAAGG...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | GACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCCAGAAGCATGCCGAGTaGCTGCTCAATGTTATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DKVGLLTATQHSSHQISAQKHAE*LLNVIA Trigger: GGCTATAACATTGAGCAGGCACTCGGCATGCTTCTG...GGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTAGGCTGCTATTGGTCTaGTTCATGCTCTGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNFWGWTKWVSSQLPNILRLLLV*FMLWTW Trigger: CCAGGTCCAGAGCATGAAGCAGACCAATAGCAGCCT...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | GACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCTCCACATCGTGTTTATaGCACAGAAGCATGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVGLLTATQHSSHQISASTSCL*HRSMPS Trigger: ACTCGGCATGCTTCTGTGGCATAAACACGATGTGGA...GGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR GCA 90 bp | ATAAACCCATGTCTGTGTAAGTCCCCAACCCTTCTTTCTCCAAACTTTTGGGGGTGGGCTTCCCGATACTaGAGTGAGGCCTTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: INPCLCKSPTLLSPNFWGWASRY*SEAFRT Trigger: AGTCCTGAAGGCCTCACTGCAGTATCGGGAAGCCCA...CCCCCAAAAGTTTGGAGAAAGAAGGGTTGGGGACTTACACAGACATGGGTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTTGTACTTGTCAAGTTTaGCATCTGATACACAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSLVLPERSSQRGSGASCTCQV*HLIHSG Trigger: ACCACTGTGTATCAGATGCCAAACTTGACAAGTACA...AGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGTGTACTTGTCAAGTTTaGCATCTGATACACAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVDKVGLLTATQHSSHQCTCQV*HLIHSG Trigger: ACCACTGTGTATCAGATGCCAAACTTGACAAGTACA...CTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | TACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCTGTGGCTGTCCGCCGTaGGGTGCCGTCTTGGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YPHTKGRPRGQALCRQAGCGCPP*GAVLAR Trigger: TCGGGCCAAGACGGCACCCAACGGCGGACAGCCACA...GCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGTA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066646.12 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCATGGCGGAGGCTGCTATaGGTCTGCTTCATGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKGRPRGQALCRQAGKEAWRRLL*VCFMLW Trigger: CCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCA...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS CCA 90 bp | AACCTCCTTCTTCCCAGGACCAGGCCGTGCATTCAGAGGTCTGGATaGCAGAGGCTCTCGCTTGGGGTCTCCAGTATCCGGTTCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLLLPRTRPCIQRSG*QRLSLGVSSIRFPL Trigger: GAGGGGGAACCGGATACTGGAGACCCCAAGCGAGAGCCTCTGCCATCCAGACCTCTGAATGCACGGCCTGGTCCTGGGAAGAAGGAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | CAGGAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGGCCGCCCTCCAGTGCTaGGCGGAGGCTGCTATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEHMQNPQVQAVPTGSFGAALQC*AEAAIG Trigger: ACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGGC...CCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS GCA 90 bp | AAGACCTCGGAGTGTGAGGTTAGCGAGGTCTGGGCTTCCCGATACTaGAGTGAGGCCTTCAGGACTCAGGTACATGCCCTTGGGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: KTSECEVSEVWASRY*SEAFRTQVHALGRT Trigger: CGTCCGCCCAAGGGCATGTACCTGAGTCCTGAAGGCCTCACTGCAGTATCGGGAAGCCCAGACCTCGCTAACCTCACACTCCGAGGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS CCA 90 bp | TCTGAACCTCCTTCTTCCCAGGACCAGGCCGTGCATTCAGAGGTCTaGATGGCAGAGGCTCTCGCTTGGGGTCTCCAGTATCCGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEPPSSQDQAVHSEV*MAEALAWGLQYPVP Trigger: GGGAACCGGATACTGGAGACCCCAAGCGAGAGCCTCTGCCATCCAGACCTCTGAATGCACGGCCTGGTCCTGGGAAGAAGGAGGTTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAGTGGTCCAGCGGGAGTaGAACTTGGTATTAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKGRPRGQALCRQAGKEAVVQRE*NLVLAS Trigger: TGAGGCTAATACCAAGTTCAACTCCCGCTGGACCAC...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | CCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCATCCGCTGGAAGCACTaGCCATGGAACCCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVLSAAREIQPKGFRSLIRWKH*PWNPKA Trigger: GGCCTTTGGGTTCCATGGCAAGTGCTTCCAGCGGAT...GAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | TCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGGGCAAAGGCTGGGAATCACCTaGTCAGGGAGCATCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVLPERSSQRGSGASGQRLGIT*SGSICW Trigger: CCAGCAGATGCTCCCTGACAAGGTGATTCCCAGCCT...TTGCCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | ACCCCCACACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAATAGCCCCAAAGTCTTaGCCGTATCTACGAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPTQRVGPEAKPSAGRQAIAPKS*PYLRIA Trigger: AGCTATTCGTAGATACGGCAAAGACTTTGGGGCTAT...TGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGTGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS TCA 90 bp | GGTCTGCTTCATGCTCTGGACCTGGCGCTTAAGAGAGATGAGCTGTaGGTCAAGACCTCGGAGTGTGAGGTTAGCGAGGTCTGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLHALDLALKRDEL*VKTSECEVSEVWAS Trigger: GGAAGCCCAGACCTCGCTAACCTCACACTCCGAGGTCTTGACTCACAGCTCATCTCTCTTAAGCGCCAGGTCCAGAGCATGAAGCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CCA 90 bp | AGGACTCAGGTACATGCCCTTGGGCGGACGTCTCCGAGTTCGAAGTaGGTGGTGGCGATACTGAGATATCTGAACCTCCTTCTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTQVHALGRTSPSSK*VVAILRYLNLLLPR Trigger: CCTGGGAAGAAGGAGGTTCAGATATCTCAGTATCGCCACCACCCACTTCGAACTCGGAGACGTCCGCCCAAGGGCATGTACCTGAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | CACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCCACCCCAATCCCGCAGGGCTCTCAGGCTaGCACTCCGGAATTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSYPTFFPPDFCHPHPNPAGLSG*HSGITA Trigger: AGCAGTAATTCCGGAGTGCAAGCCTGAGAGCCCTGC...GGGATTGGGGTGGGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGATCCGCTGGAAGCACTaGCCATGGAACCCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVPSVLSAAREIQPKGFRIRWKH*PWNPKA Trigger: GGCCTTTGGGTTCCATGGCAAGTGCTTCCAGCGGAT...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTGCCGCCCTCCAGTGCTaGGCGGAGGCTGCTATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PNFWGWTKWVSSQLPNILAALQC*AEAAIG Trigger: ACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGGC...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | GAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTATGCAGGGCTCTCAGGCTaGCACTCCGGAATTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EHMQNPQVQAVPTGSFGYAGLSG*HSGITA Trigger: AGCAGTAATTCCGGAGTGCAAGCCTGAGAGCCCTGC...ATACCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGTAGGCCCAGAGGCCAAGCCCTCTGCAGGCAGGCAGGCAAGGAGGCAATGTACTTGTCAAGTTaGGCATCTGATACACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKGRPRGQALCRQAGKEAMYLSS*ASDTQW Trigger: CCACTGTGTATCAGATGCCAAACTTGACAAGTACAT...TGCCTCCTTGCCTGCCTGCCTGCAGAGGGCTTGGCCTCTGGGCCTACCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | CAGGAACACATGCAGAACCCACAGGTCCAAGCTGTGCCAACTGGCAGCTTTGGGTGTTCAAACAGCACCTaGTCCTCCACCGTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QEHMQNPQVQAVPTGSFGCSNST*SSTVHS Trigger: TGAGTGGACGGTGGAGGACAAGGTGCTGTTTGAACA...CCCAAAGCTGCCAGTTGGCACAGCTTGGACCTGTGGGTTCTGCATGTGTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCAGGCTGGGAATCACCTaGTCAGGGAGCATCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPRLGIT*SGSICW Trigger: CCAGCAGATGCTCCCTGACAAGGTGATTCCCAGCCT...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCTGGCGGAGGCTGCTATaGGTCTGCTTCATGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPWRRLL*VCFMLW Trigger: CCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCA...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | TCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGGGCAAGTGGTCCAGCGGGAGTaGAACTTGGTATTAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVLPERSSQRGSGASGQVVQRE*NLVLAS Trigger: TGAGGCTAATACCAAGTTCAACTCCCGCTGGACCAC...TTGCCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | CTAGTCCCTTCTGTCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGTGTTCAAACAGCACCTaGTCCTCCACCGTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVPSVLSAAREIQPKGFRCSNST*SSTVHS Trigger: TGAGTGGACGGTGGAGGACAAGGTGCTGTTTGAACA...CCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGACAGAAGGGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS-3UTR CAA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTCTCAGGTACATGCCCTaGGGCGGACGTCTCCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PNFWGWTKWVSSQLPNILLRYMP*GGRLRV Trigger: AACTCGGAGACGTCCGCCCAAGGGCATGTACCTGAG...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | ATAAACCCATGTCTGTGTAAGTCCCCAACCCTTCTTTCTCCAAACTTTTGGGGGCTCAGGTACATGCCCTaGGGCGGACGTCTCCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: INPCLCKSPTLLSPNFWGLRYMP*GGRLRV Trigger: AACTCGGAGACGTCCGCCCAAGGGCATGTACCTGAG...CCCCCAAAAGTTTGGAGAAAGAAGGGTTGGGGACTTACACAGACATGGGTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | TCCTTAGTGCTGCCAGAGAGATCCAGCCAAAGGGGTTCAGGAGCCTCTGGGCAAATAGCCCCAAAGTCTTaGCCGTATCTACGAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVLPERSSQRGSGASGQIAPKS*PYLRIA Trigger: AGCTATTCGTAGATACGGCAAAGACTTTGGGGCTAT...TTGCCCAGAGGCTCCTGAACCCCTTTGGCTGGATCTCTCTGGCAGCACTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | AGTGGGTCTCCTCACAGCTACCCAACATTCTTCCCACCAGATTTCTGCCATCCCGCCATTGCAATGTACTaGTCAAGTTTGGCATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGSPHSYPTFFPPDFCHPAIAMY*SSLASD Trigger: ATCAGATGCCAAACTTGACAAGTACATTGCAATGGC...GGGATGGCAGAAATCTGGTGGGAAGAATGTTGGGTAGCTGTGAGGAGACCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | CCAAACTTTTGGGGGTGGACAAAGTGGGTCTCCTCACAGCTACCCAACATTCTTGCCATTGCAATGTACTaGTCAAGTTTGGCATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PNFWGWTKWVSSQLPNILAIAMY*SSLASD Trigger: ATCAGATGCCAAACTTGACAAGTACATTGCAATGGC...AAGAATGTTGGGTAGCTGTGAGGAGACCCACTTTGTCCACCCCCAAAAGTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS-3UTR CAA 90 bp | ATAAACCCATGTCTGTGTAAGTCCCCAACCCTTCTTTCTCCAAACTTTTGGGGGATGTACTTGTCAAGTTaGGCATCTGATACACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: INPCLCKSPTLLSPNFWGMYLSS*ASDTQW Trigger: CCACTGTGTATCAGATGCCAAACTTGACAAGTACAT...CCCCCAAAAGTTTGGAGAAAGAAGGGTTGGGGACTTACACAGACATGGGTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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| CDS CCA 72 bp | CCTCCGAGTGTGGCTGTCCGCCGTTGGGTGCCGTCTTaGCCCGACTTCGGGACAAGATCCCGGAGCCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPSVAVRRWVPS*PDFGTRSRSPH Trigger: GTGCGGGCTCCGGGATCTTGTCCCGAAGTCGGGCCAAGACGGCACCCAACGGCGGACAGCCACACTCGGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000140442.8 |
||
| CDS CAA 72 bp | TCCTCCGAGTGTGGCTGTCCGCCGTTGGGTGCCGTCTaGGCCCGACTTCGGGACAAGATCCCGGAGCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSECGCPPLGAV*ARLRDKIPEPA Trigger: TGCGGGCTCCGGGATCTTGTCCCGAAGTCGGGCCAAGACGGCACCCAACGGCGGACAGCCACACTCGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000140442.8 |
||
| CDS GCA 72 bp | GAGGGTCAATGCCGCCCTCCAGTGCTTGGCGGAGGCTaGTATTGGTCTGCTTCATGCTCTGGACCTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGQCRPPVLGGG*YWSASCSGPGA Trigger: AGCGCCAGGTCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGGCATTGACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CAA 72 bp | ACTGCAGTGAGGCCTTCAGGACTCAGGTACATGCCCTaGGGCGGACGTCTCCGAGTTCGAAGTGGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAVRPSGLRYMP*GGRLRVRSGWW Trigger: CCACCACCCACTTCGAACTCGGAGACGTCCGCCCAAGGGCATGTACCTGAGTCCTGAAGGCCTCACTGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CAA 90 bp | CGGAGAGGGTCAATGCCGCCCTCCAGTGCTTGGCGGAGGCTGCTATaGGTCTGCTTCATGCTCTGGACCTGGCGCTTAAGAGAGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGSMPPSSAWRRLL*VCFMLWTWRLREMS Trigger: GCTCATCTCTCTTAAGCGCCAGGTCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGGCATTGACCCTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS GCA 72 bp | CCGCCCTCCAGTGCTTGGCGGAGGCTGCTATTGGTCTaGTTCATGCTCTGGACCTGGCGCTTAAGAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PPSSAWRRLLLV*FMLWTWRLREM Trigger: CATCTCTCTTAAGCGCCAGGTCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CCA 72 bp | CCTTCTTCCCAGGACCAGGCCGTGCATTCAGAGGTCTaGATGGCAGAGGCTCTCGCTTGGGGTCTCCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PSSQDQAVHSEV*MAEALAWGLQY Trigger: ATACTGGAGACCCCAAGCGAGAGCCTCTGCCATCCAGACCTCTGAATGCACGGCCTGGTCCTGGGAAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CAA 72 bp | CGTGCATTCAGAGGTCTGGATGGCAGAGGCTCTCGCTaGGGGTCTCCAGTATCCGGTTCCCCCTCACTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RAFRGLDGRGSR*GSPVSGSPSLT Trigger: TGTGAGTGAGGGGGAACCGGATACTGGAGACCCCAAGCGAGAGCCTCTGCCATCCAGACCTCTGAATGCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CAA 72 bp | TCAATGCCGCCCTCCAGTGCTTGGCGGAGGCTGCTATaGGTCTGCTTCATGCTCTGGACCTGGCGCTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SMPPSSAWRRLL*VCFMLWTWRLR Trigger: TCTTAAGCGCCAGGTCCAGAGCATGAAGCAGACCAATAGCAGCCTCCGCCAAGCACTGGAGGGCGGCATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS GCA 72 bp | GAGTGTGAGGTTAGCGAGGTCTGGGCTTCCCGATACTaGAGTGAGGCCTTCAGGACTCAGGTACATGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ECEVSEVWASRY*SEAFRTQVHAL Trigger: AAGGGCATGTACCTGAGTCCTGAAGGCCTCACTGCAGTATCGGGAAGCCCAGACCTCGCTAACCTCACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS TCA 72 bp | CATGCTCTGGACCTGGCGCTTAAGAGAGATGAGCTGTaGGTCAAGACCTCGGAGTGTGAGGTTAGCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HALDLALKRDEL*VKTSECEVSEV Trigger: GACCTCGCTAACCTCACACTCCGAGGTCTTGACTCACAGCTCATCTCTCTTAAGCGCCAGGTCCAGAGCATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
||
| CDS CCA 72 bp | GTACATGCCCTTGGGCGGACGTCTCCGAGTTCGAAGTaGGTGGTGGCGATACTGAGATATCTGAACCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VHALGRTSPSSK*VVAILRYLNLL Trigger: AAGGAGGTTCAGATATCTCAGTATCGCCACCACCCACTTCGAACTCGGAGACGTCCGCCCAAGGGCATGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066646.12 ENSMUST00000113369.3 |
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