Pregenerated sensors for RCOR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037896Ensembl transcript IDs: ENSMUST00000084968.14, ENSMUST00000116388.4
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCAGCAGCAGCCAGGCAGAGCCCACTCTCGCCCCTCTGCCAAGTaGGAACGGCATGCGCGCCTCTCTTCCTTGGAGGAAAGGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: QQQQPGRAHSRPSAK*ERHARLSSLEERED Trigger: ATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGCATGCCGTTCTCACTTGGCAGAGGGGCGAGAGTGGGCTCTGCCTGGCTGCTGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR GCA 90 bp | GCCAGGCAGAGCCCACTCTCGCCCCTCTGCCAAGTGAGAACGGCATaGGCGCCTCTCTTCCTTGGAGGAAAGGGAAGATCAGCTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: ARQSPLSPLCQVRTA*APLFLGGKGRSAAL Trigger: CAGAGCAGCTGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGCATGCCGTTCTCACTTGGCAGAGGGGCGAGAGTGGGCTCTGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR GCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATaGAACGGAGCTCTCTGGGAAGTCGTGCCAACATGGAGGAACGAG | + |
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Preference number: 1 (lower is better) Translates to: EVCRPWVPQPLGRMR*NGALWEVVPTWRNE Trigger: CTCGTTCCTCCATGTTGGCACGACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR CCA 90 bp | TGTTACTCTGTTACCGGTCCCTGGGTCCCTGGGTCCCTGGGTTCCTaGGTGGGACCACGGGCCGTGCCTCTGACTCATCTCTATGACTCT | + |
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Preference number: 1 (lower is better) Translates to: CYSVTGPWVPGSLGS*VGPRAVPLTHLYDS Trigger: AGAGTCATAGAGATGAGTCAGAGGCACGGCCCGTGGTCCCACCCAGGAACCCAGGGACCCAGGGACCCAGGGACCGGTAACAGAGTAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR TCA 90 bp | GCCTGGTGCCTGGCACAGCCGCTCTGCCTGCCACACCATCCGAGATaGTCACCAAGTCTCAACACTGCTGAGGGGGAACACATCTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: AWCLAQPLCLPHHPR*SPSLNTAEGEHISS Trigger: GCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAGACTTGGTGATCATCTCGGATGGTGTGGCAGGCAGAGCGGCTGTGCCAGGCACCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR CCA 90 bp | CAAAAGAAGTTACTAGTGTTACTCTGTTACCGGTCCCTGGGTCCCTaGGTCCCTGGGTTCCTGGGTGGGACCACGGGCCGTGCCTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: QKKLLVLLCYRSLGP*VPGFLGGTTGRASD Trigger: GTCAGAGGCACGGCCCGTGGTCCCACCCAGGAACCCAGGGACCCAGGGACCCAGGGACCGGTAACAGAGTAACACTAGTAACTTCTTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR GCA 90 bp | TGCAGTCTCAAGTGGCCATGGATGCTAGGACACAGCCCAGCCGGCTaGTCCTCAGGCCCTTCAGGCCCACAGTCTGGTAAGAGAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: CSLKWPWMLGHSPAG*SSGPSGPQSGKRAK Trigger: TTTTGCTCTCTTACCAGACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATCCATGGCCACTTGAGACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR CCA 90 bp | CTCGCCCCTCTGCCAAGTGAGAACGGCATGCGCGCCTCTCTTCCTTaGAGGAAAGGGAAGATCAGCTGCTCTGGTCATAACCATACCGCC | + |
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Preference number: 1 (lower is better) Translates to: LAPLPSENGMRASLP*RKGKISCSGHNHTA Trigger: GGCGGTATGGTTATGACCAGAGCAGCTGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGCATGCCGTTCTCACTTGGCAGAGGGGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR TCA 90 bp | CTTCTGAGCCGTGACGGACGCTCCTGCAATTGTGCTTTACTACAGTaGGGAGAAGCTGCAAAGACCCGGGAGAGGCGGGAAGGGCATTGC | + |
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Preference number: 1 (lower is better) Translates to: LLSRDGRSCNCALLQ*GEAAKTRERREGHC Trigger: GCAATGCCCTTCCCGCCTCTCCCGGGTCTTTGCAGCTTCTCCTCACTGTAGTAAAGCACAATTGCAGGAGCGTCCGTCACGGCTCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR GCA 90 bp | AACGGCATGCGCGCCTCTCTTCCTTGGAGGAAAGGGAAGATCAGCTaGTCTGGTCATAACCATACCGCCCGACACCGGACTCTTCATGGC | + |
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Preference number: 1 (lower is better) Translates to: NGMRASLPWRKGKIS*SGHNHTARHRTLHG Trigger: GCCATGAAGAGTCCGGTGTCGGGCGGTATGGTTATGACCAGAGCAGCTGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGCATGCCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR TCA 90 bp | GCGCTGCTCTGCTCACTGGAGGGAAGGGCATGCAAACACGCTAGGTaGGCAGGGTTTTATCTTGTGCCTCAGTGTCCCTGTGAGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: ALLCSLEGRACKHAR*AGFYLVPQCPCESH Trigger: GTGTGACTCACAGGGACACTGAGGCACAAGATAAAACCCTGCTCACCTAGCGTGTTTGCATGCCCTTCCCTCCAGTGAGCAGAGCAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR TCA 90 bp | CCTCATCCTGGGATTACAATGCTGAAGGCTGAAGGCAGAAAGCACTaGGGTCCACGTTCCCATGAGGCTACAGTGCCCAAGGACAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: PHPGITMLKAEGRKH*GPRSHEATVPKDSC Trigger: GCAACTGTCCTTGGGCACTGTAGCCTCATGGGAACGTGGACCTCAGTGCTTTCTGCCTTCAGCCTTCAGCATTGTAATCCCAGGATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR TCA 90 bp | ACGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTaGTCACTGCCGCTGGCCGGTCAACACAATATTCAAGTAACAGGT | + |
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Preference number: 1 (lower is better) Translates to: TAEARASEERARVQH*SLPLAGQHNIQVTG Trigger: ACCTGTTACTTGAATATTGTGTTGACCGGCCAGCGGCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR CCA 90 bp | TGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTaGGAAGTCGTGCCAACATGGAGGAACGAGCAAAGAATTAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: WVPQPLGRMRCNGAL*EVVPTWRNEQRIKA Trigger: TGCCTTAATTCTTTGCTCGTTCCTCCATGTTGGCACGACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR CCA 90 bp | ATGATAGGAACCAAATCTCTCGGAGCTGGGGATGATGGTGGCAGCTaGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGGGATTACAA | + |
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Preference number: 1 (lower is better) Translates to: MIGTKSLGAGDDGGS*GSRRDGCTLILGLQ Trigger: TTGTAATCCCAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCCAGCTCCGAGAGATTTGGTTCCTATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR TCA 90 bp | TCAATGGGCCGGTGTGAGACAGGATGGACAAAGTCCCTCTGCACTTaGCCTTGGAATGACCTTTCTCCAGACTTCTCAAGAAGAATATAC | + |
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Preference number: 1 (lower is better) Translates to: SMGRCETGWTKSLCT*PWNDLSPDFSRRIY Trigger: GTATATTCTTCTTGAGAAGTCTGGAGAAAGGTCATTCCAAGGTCAAGTGCAGAGGGACTTTGTCCATCCTGTCTCACACCGGCCCATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR CCA 90 bp | TTGGACTTATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATaGAGACTATTCCAGCAGCAGCAGCAGCAGCCAGGCAGAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LDLYHCGLCHEKFKT*RLFQQQQQQPGRAH Trigger: GTGGGCTCTGCCTGGCTGCTGCTGCTGCTGCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATAAGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR TCA 90 bp | TCATTATCTTACAACATGCATAGACTACTGACTCCTTCTGAGCCGTaGCGGACGCTCCTGCAATTGTGCTTTACTACAGTGAGGAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: SLSYNMHRLLTPSEP*RTLLQLCFTTVRRS Trigger: GCTTCTCCTCACTGTAGTAAAGCACAATTGCAGGAGCGTCCGTCACGGCTCAGAAGGAGTCAGTAGTCTATGCATGTTGTAAGATAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR TCA 90 bp | GTTGTATCAGGAAGCTTGTATGATAAAGGTGACGATGTGGTCTGCTaGAGGGCTTGTGATTTCCAAAGAAGCATGATTTTACTTAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: VVSGSLYDKGDDVVC*RACDFQRSMILLRW Trigger: CCACCTAAGTAAAATCATGCTTCTTTGGAAATCACAAGCCCTTCAGCAGACCACATCGTCACCTTTATCATACAAGCTTCCTGATACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR CCA 90 bp | GAAAGCAGGGATCCAGTTAGTGTAATGCACTGTTTGGCTTATTTTTaGTGTGCAATTATACCAATAGTACATCTCATAGTGAGAAAGACG | + |
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Preference number: 1 (lower is better) Translates to: ESRDPVSVMHCLAYF*CAIIPIVHLIVRKT Trigger: CGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACACTAACTGGATCCCTGCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | CGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTGATCACTGCCCCTGGGTTCCTGGGTaGGACCACGGGCCGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RPRPGPLRKELEYSIDHCPWVPG*DHGPCL Trigger: GAGGCACGGCCCGTGGTCCCACCCAGGAACCCAGGG...GCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR GCA 90 bp | CGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTGATCACTGCGTTGATTGGGAGAGCTaGCATTGTTGGGGCTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: RPRPGPLRKELEYSIDHCVDWES*HCWGSG Trigger: CCCCGAGCCCCAACAATGGCAGCTCTCCCAATCAAC...GCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCATAAAGGTGACGATGTaGTCTGCTGAAGGGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: DARTQPSRLLLRPFRPTVIKVTM*SAEGLV Trigger: CACAAGCCCTTCAGCAGACCACATCGTCACCTTTAT...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCATGTCTTGTAATACCTaGTACCTGGATAACGTGTCG | + |
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Preference number: 2 (lower is better) Translates to: DARTQPSRLLLRPFRPTVMSCNT*YLDNVS Trigger: CGACACGTTATCCAGGTATCAGGTATTACAAGACAT...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCACACCAGTACACAAATaGCACAAAAGGACACATGGA | + |
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Preference number: 2 (lower is better) Translates to: DARTQPSRLLLRPFRPTVTPVHK*HKRTHG Trigger: TCCATGTGTCCTTTTGTGTCATTTGTGTACTGGTGT...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | CGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTGATCACTGCGGTGCACCCTCATCCTaGGATTACAATGCTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RPRPGPLRKELEYSIDHCGAPSS*DYNAEG Trigger: GCCTTCAGCATTGTAATCCCAGGATGAGGGTGCACC...GCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGATCTGTTACCGGTCCCTaGGTCCCTGGGTCCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LNTAEGEHISSKVAWAQRSVTGP*VPGSLG Trigger: ACCCAGGGACCCAGGGACCCAGGGACCGGTAACAGA...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCATTTCCAAAGAAGCATaGTTTTACTTAGGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: DARTQPSRLLLRPFRPTVISKEA*FYLGGC Trigger: GCAGCCACCTAAGTAAAATCATGCTTCTTTGGAAAT...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | CGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTGATCACTGCATGCAGGAACAGAGCTaGGCCTTTCAAGACTACCTG | + |
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Preference number: 2 (lower is better) Translates to: RPRPGPLRKELEYSIDHCMQEQS*AFQDYL Trigger: CAGGTAGTCTTGAAAGGCCCAGCTCTGTTCCTGCAT...GCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTTTGTCCACAGAGATGTaGTGCAGATGGCTAGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VGPPALRQNEMQRSSLGSLSTEM*CRWLGD Trigger: ATCACCTAGCCATCTGCATCACATCTCTGTGGACAA...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR GCA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACCTCTCTGGGAAGTCGTaGCAACATGGAGGAACGAGC | + |
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Preference number: 2 (lower is better) Translates to: RTHGVTYNGQARQEDESYLSGKS*QHGGTS Trigger: GCTCGTTCCTCCATGTTGGCACGACTTCCCAGAGAG...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR GCA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACAGAAACTGCAGGCCATaGAGGAACAGAGCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RTHGVTYNGQARQEDESYRNCRP*RNRAGP Trigger: AGGCCCAGCTCTGTTCCTGCATGGCCTGCAGTTTCT...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR GCA 90 bp | CGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTGATCACTGCCAGGGTTTTATCTTGTaGCTCAGTGTCCCTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RPRPGPLRKELEYSIDHCQGFIL*LSVPVS Trigger: ACTCACAGGGACACTGAGGCACAAGATAAAACCCTG...GCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | CCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAATGCAGATGGCTAGGTaGTGTCTTGTAATACCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PWVPQPLGRMRCNGALWEMQMAR*CLVIPD Trigger: ATCAGGTATTACAAGACATCACCTAGCCATCTGCAT...TTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGGAAGGCAGAAAGCACTaGGGTCCACGTTCCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLEGRKH*GPRSHE Trigger: CTCATGGGAACGTGGACCTCAGTGCTTTCTGCCTTC...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | TATCTTGTGCCTCAGTGTCCCTGTGAGTCACACGCAGAGCGGAGGCTAACTTCAAGTCTCAAGTGGCCATaGATGCTAGGACACAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: YLVPQCPCESHAERRLTSSLKWP*MLGHSP Trigger: TGGGCTGTGTCCTAGCATCCATGGCCACTTGAGACT...TGAAGTTAGCCTCCGCTCTGCGTGTGACTCACAGGGACACTGAGGCACAAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | CGGCCGAGGCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTGATCACTGCATTTCCAAAGAAGCATaGTTTTACTTAGGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RPRPGPLRKELEYSIDHCISKEA*FYLGGC Trigger: GCAGCCACCTAAGTAAAATCATGCTTCTTTGGAAAT...GCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGCCTCGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGGGCACGCCAAGAGGATaGGAGCTACTGGTGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: AIIPIVHLIVRKTKWAELGTPRG*ELLVCS Trigger: GCTGCACACCAGTAGCTCTCATCCTCTTGGCGTGCC...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACTTTCCTGAGCTGACCTaGCATTTAAAGTCTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: RTHGVTYNGQARQEDESYFPELT*HLKSAL Trigger: GAGTGCAGACTTTAAATGTCAGGTCAGCTCAGGAAA...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGTTAGGCAGAATGAGATaGAACGGAGCTCTCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLLGRMR*NGALWE Trigger: TTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAA...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTGTTGATTGGGAGAGCTaGCATTGTTGGGGCTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGPQSGKRAKVILKSQNIVDWES*HCWGSG Trigger: CCCCGAGCCCCAACAATGGCAGCTCTCCCAATCAAC...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR GCA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGCACAGCCGCTCTGCCTaGCACACCATCCGAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: AIIPIVHLIVRKTKWAELHSRSA*HTIRDD Trigger: ATCATCTCGGATGGTGTGGCAGGCAGAGCGGCTGTG...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACAGGTCCACGTTCCCATaGGGCTACAGTGCCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QTNGIATTLGCFFSSWSHRSTFP*GYSAQG Trigger: TCCTTGGGCACTGTAGCCTCATGGGAACGTGGACCT...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGAAAGGGATTGATAACATaGTTGCCAGAAGGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LNTAEGEHISSKVAWAQRKGLIT*LPEGEG Trigger: GCCTTCTCCTTCTGGCAACCATGTTATCAATCCCTT...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGGACAGTTGCTGCAAATaGGCTTTTACCACTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLDSCCK*AFTTWK Trigger: TTTCCAAGTGGTAAAAGCTCATTTGCAGCAACTGTC...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR GCA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACCTCTCTGGGAAGTCGTaGCAACATGGAGGAACGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QTNGIATTLGCFFSSWSHLSGKS*QHGGTS Trigger: GCTCGTTCCTCCATGTTGGCACGACTTCCCAGAGAG...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR GCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGAACAGAACAAGCCTGGTaGCTGGCACAGCCGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHRTEQAW*LAQPLC Trigger: GCAGAGCGGCTGTGCCAGGCACCAGGCTTGTTCTGT...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTGGTGCACCCTCATCCTaGGATTACAATGCTGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SGPQSGKRAKVILKSQNIGAPSS*DYNAEG Trigger: GCCTTCAGCATTGTAATCCCAGGATGAGGGTGCACC...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATGGGATCAAGAAGAGATaGGTGCACCCTCATCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GPQSGKRAKVILKSQNIYGIKKR*VHPHPG Trigger: CCCAGGATGAGGGTGCACCCATCTCTTCTTGATCCC...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGAACACAAAAGGACACATaGAGTGACATACAATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LNTAEGEHISSKVAWAQRTQKDT*SDIQWP Trigger: TGGCCATTGTATGTCACTCCATGTGTCCTTTTGTGT...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGCGGTGTGAGACAGGATaGACAAAGTCCCTCTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: AIIPIVHLIVRKTKWAELRCETG*TKSLCT Trigger: AGTGCAGAGGGACTTTGTCCATCCTGTCTCACACCG...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTGACGATGTGGTCTGCTaGAGGGCTTGTGATTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SGPQSGKRAKVILKSQNIDDVVC*RACDFQ Trigger: TTGGAAATCACAAGCCCTTCAGCAGACCACATCGTC...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATTTTTACTTAGGTGGCTaGCCCAGGAGAGAAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GPQSGKRAKVILKSQNIYFYLGG*PRREGE Trigger: CTCCCCTTCTCTCCTGGGGCAGCCACCTAAGTAAAA...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTGGCACGCCAAGAGGATaGGAGCTACTGGTGTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VSFHLGLTKQQTHPLLICGTPRG*ELLVCS Trigger: GCTGCACACCAGTAGCTCTCATCCTCTTGGCGTGCC...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCTGTGTTTTTGATTAAGGTTTGTAACCACCATTGGGAAGGTCTTACAAAAAAGACAGAACAAGCCTaGTGCCTGGCACAGCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PSVFLIKVCNHHWEGLTKKTEQA*CLAQPL Trigger: GAGCGGCTGTGCCAGGCACCAGGCTTGTTCTGTCTT...TTTTGTAAGACCTTCCCAATGGTGGTTACAAACCTTAATCAAAAACACAGAAGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR GCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCAGAAACTGCAGGCCATaGAGGAACAGAGCTGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: YITVDCVMKSLKHGDYSSRNCRP*RNRAGP Trigger: AGGCCCAGCTCTGTTCCTGCATGGCCTGCAGTTTCT...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR GCA 90 bp | AATGCTATGGACATTCACCACAATGACTGTGCTGAACTAGAAAACAAGCAGAGAGCTAACTTCATCCTGTaGTTGCCTTCCCCTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: NAMDIHHNDCAELENKQRANFIL*LPSPSA Trigger: AGCTGAAGGGGAAGGCAAGCACAGGATGAAGTTAGC...TCTCTGCTTGTTTTCTAGTTCAGCACAGTCATTGTGGTGAATGTCCATAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCGGGATCAAGAAGAGATaGGTGCACCCTCATCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: YITVDCVMKSLKHGDYSSGIKKR*VHPHPG Trigger: CCCAGGATGAGGGTGCACCCATCTCTTCTTGATCCC...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGGACAGTTGCTGCAAATaGGCTTTTACCACTTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: AIIPIVHLIVRKTKWAELDSCCK*AFTTWK Trigger: TTTCCAAGTGGTAAAAGCTCATTTGCAGCAACTGTC...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | AATGCTATGGACATTCACCACAATGACTGTGCTGAACTAGAAAACAAGCAGAGAATGATTTTACTTAGGTaGCTGCCCCAGGAGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: NAMDIHHNDCAELENKQRMILLR*LPQERR Trigger: CCTTCTCTCCTGGGGCAGCCACCTAAGTAAAATCAT...TCTCTGCTTGTTTTCTAGTTCAGCACAGTCATTGTGGTGAATGTCCATAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGAACTCTTCCTCATCAATaGGCCGGTGTGAGACAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHRTLPHQ*AGVRQD Trigger: ATCCTGTCTCACACCGGCCCATTGATGAGGAAGAGT...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR CAA 90 bp | TTGCTTGTTCCCAGTCCAAACAAATGGCATTGCCACCACTCTAGGTaGTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LLVPSPNKWHCHHSR*FLFILVSLSNKHIH Trigger: ATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTGGACTGGGAACAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACATGCAGATGGCTAGGTaGTGTCTTGTAATACCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: QTNGIATTLGCFFSSWSHMQMAR*CLVIPD Trigger: ATCAGGTATTACAAGACATCACCTAGCCATCTGCAT...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACTCTCTTCTCCTTTCCTaGGCTGACCTGACATTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QTNGIATTLGCFFSSWSHSLLLS*ADLTFK Trigger: TTTAAATGTCAGGTCAGCTCAGGAAAGGAGAAGAGA...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGCACCTTCTGTGTTTTTaGTTAAGGTTTGTAACCACC | + |
|
Preference number: 2 (lower is better) Translates to: AIIPIVHLIVRKTKWAELHLLCF*LRFVTT Trigger: GGTGGTTACAAACCTTAATCAAAAACACAGAAGGTG...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR GCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGATCAAGAAGAGATGGGTaGACCCTCATCCTGGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHRSRRDG*TLILGL Trigger: TAATCCCAGGATGAGGGTGCACCCATCTCTTCTTGA...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATGTAATACCTGATACCTaGATAACGTGTCGTCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: GPQSGKRAKVILKSQNIYVIPDT*ITCRPY Trigger: GTATGGACGACACGTTATCCAGGTATCAGGTATTAC...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | ACCAATTCCAAATGTACAAGCACCAGGTACAATGATAGGAACCAAATCTCTCGGGTAATACCTGATACCTaGATAACGTGTCGTCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: TNSKCTSTRYNDRNQISRVIPDT*ITCRPY Trigger: GTATGGACGACACGTTATCCAGGTATCAGGTATTAC...CCGAGAGATTTGGTTCCTATCATTGTACCTGGTGCTTGTACATTTGGAATTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTAAAGGACACATGGAGTaGCATACAATGGCCAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VSFHLGLTKQQTHPLLICKGHME*HTMARH Trigger: GTGCCTGGCCATTGTATGTCACTCCATGTGTCCTTT...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTGTGTTTTTGATTAAGGTTTGTAACCACCATTGGGAAGGTCTTACAAAATCTGAAGCTGTTGATTaGGAGAGCTGCCATTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PSVFLIKVCNHHWEGLTKSEAVD*ESCHCW Trigger: CCAACAATGGCAGCTCTCCCAATCAACAGCTTCAGA...TTTTGTAAGACCTTCCCAATGGTGGTTACAAACCTTAATCAAAAACACAGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTATGCAGGAACAGAGCTaGGCCTTTCAAGACTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSFHLGLTKQQTHPLLICMQEQS*AFQDYL Trigger: CAGGTAGTCTTGAAAGGCCCAGCTCTGTTCCTGCAT...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR CAA 90 bp | CCAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTaGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PNKWHCHHSRLFLFI*VSLSNKHIHYLSVL Trigger: TAGGACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGAATGTCTTGTAATACCTaGTACCTGGATAACGTGTCG | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHRMSCNT*YLDNVS Trigger: CGACACGTTATCCAGGTATCAGGTATTACAAGACAT...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGTGTTTTTGATTAAGGTTTGTAACCACCATTGGGAAGGTCTTACAAAATTTCCTGAGCTGACCTaGCATTTAAAGTCTGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: PSVFLIKVCNHHWEGLTKFPELT*HLKSAL Trigger: GAGTGCAGACTTTAAATGTCAGGTCAGCTCAGGAAA...TTTTGTAAGACCTTCCCAATGGTGGTTACAAACCTTAATCAAAAACACAGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR TCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGATCTCTTCTCCTTTCCTaGGCTGACCTGACATTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHRSLLLS*ADLTFK Trigger: TTTAAATGTCAGGTCAGCTCAGGAAAGGAGAAGAGA...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR GCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGACCAAACAAATGGCATTaGCACCACTCTAGGTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHRPNKWH*HHSRLF Trigger: AAACAACCTAGAGTGGTGGCAATGCCATTTGTTTGG...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR CAA 90 bp | CTTTGCTTCCATGAAAGCAGGGATCCAGTTAGTGTAATGCACTGTTaGGCTTATTTTTGGTGTGCAATTATACCAATAGTACATCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LCFHESRDPVSVMHC*AYFWCAIIPIVHLI Trigger: TATGAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACACTAACTGGATCCCTGCTTTCATGGAAGCAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
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| 3UTR-3UTR CCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGAGAAAAGTTTAAAACATaGAGACTATTCCAGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AHFREGDCKHSLSYNMHREKFKT*RLFQQQ Trigger: CTGCTGCTGGAATAGTCTCCATGTTTTAAACTTTTC...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCTGTGTTTTTGATTAAGGTTTGTAACCACCATTGGGAAGGTCTTACAAAAGATATAGTGTTTGTGTaGTCACACCAGTACACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PSVFLIKVCNHHWEGLTKDIVFV*SHQYTN Trigger: ATTTGTGTACTGGTGTGATCACACAAACACTATATC...TTTTGTAAGACCTTCCCAATGGTGGTTACAAACCTTAATCAAAAACACAGAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTGATATAGTGTTTGTGTaGTCACACCAGTACACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VSFHLGLTKQQTHPLLICDIVFV*SHQYTN Trigger: ATTTGTGTACTGGTGTGATCACACAAACACTATATC...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR GCA 72 bp | GCAGCAGCAGCCAGGCAGAGCCCACTCTCGCCCCTCTaGCAAGTGAGAACGGCATGCGCGCCTCTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AAAARQSPLSPL*QVRTACAPLFL Trigger: AAGGAAGAGAGGCGCGCATGCCGTTCTCACTTGGCAGAGGGGCGAGAGTGGGCTCTGCCTGGCTGCTGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | CCACGGCAGCAGCCACCCTGTAGCACAGCGCTGCTCTaGTCACTGGAGGGAAGGGCATGCAAACACGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRQQPPCSTALL*SLEGRACKHAR Trigger: CCTAGCGTGTTTGCATGCCCTTCCCTCCAGTGAGCAGAGCAGCGCTGTGCTACAGGGTGGCTGCTGCCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | AAGTGGCCATGGATGCTAGGACACAGCCCAGCCGGCTaGTCCTCAGGCCCTTCAGGCCCACAGTCTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KWPWMLGHSPAG*SSGPSGPQSGK Trigger: CTTACCAGACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATCCATGGCCACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CCA 72 bp | TTACTAGTGTTACTCTGTTACCGGTCCCTGGGTCCCTaGGTCCCTGGGTTCCTGGGTGGGACCACGGGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LLVLLCYRSLGP*VPGFLGGTTGR Trigger: ACGGCCCGTGGTCCCACCCAGGAACCCAGGGACCCAGGGACCCAGGGACCGGTAACAGAGTAACACTAGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | AGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATaGAACGGAGCTCTCTGGGAAGTCGTGCCAACATGG | + |
|
Preference number: 3 (lower is better) Translates to: RPWVPQPLGRMR*NGALWEVVPTW Trigger: CCATGTTGGCACGACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CCA 72 bp | AGCAGCCACCCTGTAGCACAGCGCTGCTCTGCTCACTaGAGGGAAGGGCATGCAAACACGCTAGGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSHPVAQRCSAH*REGHANTLGEQ Trigger: CTGCTCACCTAGCGTGTTTGCATGCCCTTCCCTCCAGTGAGCAGAGCAGCGCTGTGCTACAGGGTGGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | CTGGCACAGCCGCTCTGCCTGCCACACCATCCGAGATaGTCACCAAGTCTCAACACTGCTGAGGGGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LAQPLCLPHHPR*SPSLNTAEGEH Trigger: GTGTTCCCCCTCAGCAGTGTTGAGACTTGGTGATCATCTCGGATGGTGTGGCAGGCAGAGCGGCTGTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | ACGCTCACAACCAAGAGAAAGACAGAACAAGCCTGGTaGCTGGCACAGCCGCTCTGCCTGCCACACCATCCG | + |
|
Preference number: 3 (lower is better) Translates to: TLTTKRKTEQAW*LAQPLCLPHHP Trigger: CGGATGGTGTGGCAGGCAGAGCGGCTGTGCCAGGCACCAGGCTTGTTCTGTCTTTCTCTTGGTTGTGAGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | AGCCCACTCTCGCCCCTCTGCCAAGTGAGAACGGCATaGGCGCCTCTCTTCCTTGGAGGAAAGGGAAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SPLSPLCQVRTA*APLFLGGKGRS Trigger: TGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGCATGCCGTTCTCACTTGGCAGAGGGGCGAGAGTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | CGCGCCTCTCTTCCTTGGAGGAAAGGGAAGATCAGCTaGTCTGGTCATAACCATACCGCCCGACACCGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RASLPWRKGKIS*SGHNHTARHRT Trigger: AGTCCGGTGTCGGGCGGTATGGTTATGACCAGAGCAGCTGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | CGTGACGGACGCTCCTGCAATTGTGCTTTACTACAGTaGGGAGAAGCTGCAAAGACCCGGGAGAGGCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RDGRSCNCALLQ*GEAAKTRERRE Trigger: TTCCCGCCTCTCCCGGGTCTTTGCAGCTTCTCCTCACTGTAGTAAAGCACAATTGCAGGAGCGTCCGTCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR CCA 72 bp | ACCAAATCTCTCGGAGCTGGGGATGATGGTGGCAGCTaGGGATCAAGAAGAGATGGGTGCACCCTCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TKSLGAGDDGGS*GSRRDGCTLIL Trigger: CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCCAGCTCCGAGAGATTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CCA 72 bp | ACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTaGGCACAAAGACAGACACAGAGCCACCGGCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: TAEGEHISSKVA*AQRQTQSHRQT Trigger: CGTCTGCCGGTGGCTCTGTGTCTGTCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | ACAAAGAGGCAGTGGGTGTGCTGTGACCCTCTGTTGTaGACCTCTGACACAGCACCCACTGTGTGCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TKRQWVCCDPLL*TSDTAPTVCQH Trigger: GTGTTGGCACACAGTGGGTGCTGTGTCAGAGGTTCACAACAGAGGGTCACAGCACACCCACTGCCTCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | CTCCTGCAATTGTGCTTTACTACAGTGAGGAGAAGCTaGAAAGACCCGGGAGAGGCGGGAAGGGCATTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLQLCFTTVRRS*KDPGEAGRALH Trigger: GTGCAATGCCCTTCCCGCCTCTCCCGGGTCTTTGCAGCTTCTCCTCACTGTAGTAAAGCACAATTGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR CCA 72 bp | CTGCCAAGTGAGAACGGCATGCGCGCCTCTCTTCCTTaGAGGAAAGGGAAGATCAGCTGCTCTGGTCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSENGMRASLP*RKGKISCSGHN Trigger: GTTATGACCAGAGCAGCTGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGCATGCCGTTCTCACTTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | GGGATTACAATGCTGAAGGCTGAAGGCAGAAAGCACTaGGGTCCACGTTCCCATGAGGCTACAGTGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GITMLKAEGRKH*GPRSHEATVPK Trigger: CTTGGGCACTGTAGCCTCATGGGAACGTGGACCTCAGTGCTTTCTGCCTTCAGCCTTCAGCATTGTAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | GTGAGCAGGGTTTTATCTTGTGCCTCAGTGTCCCTGTaGGTCACACGCAGAGCGGAGGCTAACTTCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSRVLSCASVSL*VTRRAEANFIL Trigger: CAGGATGAAGTTAGCCTCCGCTCTGCGTGTGACTCACAGGGACACTGAGGCACAAGATAAAACCCTGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | TGCTCACTGGAGGGAAGGGCATGCAAACACGCTAGGTaGGCAGGGTTTTATCTTGTGCCTCAGTGTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CSLEGRACKHAR*AGFYLVPQCPC Trigger: ACAGGGACACTGAGGCACAAGATAAAACCCTGCTCACCTAGCGTGTTTGCATGCCCTTCCCTCCAGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | CATGCAAACACGCTAGGTGAGCAGGGTTTTATCTTGTaGCTCAGTGTCCCTGTGAGTCACACGCAGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: HANTLGEQGFIL*LSVPVSHTQSG Trigger: TCCGCTCTGCGTGTGACTCACAGGGACACTGAGGCACAAGATAAAACCCTGCTCACCTAGCGTGTTTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | GCCAGGGCCTCTGAGGAAAGAGCTAGAGTACAGCATTaGTCACTGCCGCTGGCCGGTCAACACAATATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ARASEERARVQH*SLPLAGQHNIQ Trigger: TTGAATATTGTGTTGACCGGCCAGCGGCAGTGATCAATGCTGTACTCTAGCTCTTTCCTCAGAGGCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR CAA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACAGTGCCCAAGGACAGTaGCTGCAAATGAGCTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RTHGVTYNGQARQEDESYSAQGQ*LQMSFY Trigger: GTAAAAGCTCATTTGCAGCAACTGTCCTTGGGCACT...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | AGCGCTGGGAAACTGTCTAACAGGACTCCTGCTTCATaGGCCCACCACAGTAAGCTTTGTCACCTTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SAGKLSNRTPAS*AHHSKLCHLLC Trigger: ACACAGAAGGTGACAAAGCTTACTGTGGTGGGCTCATGAAGCAGGAGTCCTGTTAGACAGTTTCCCAGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGGCGCGCCTCTCTTCCTaGGAGGAAAGGGAAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: AIIPIVHLIVRKTKWAELARLSS*EEREDQ Trigger: CTGATCTTCCCTTTCCTCCAAGGAAGAGAGGCGCGC...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | TGGTCTGCTGAAGGGCTTGTGATTTCCAAAGAAGCATaGTTTTACTTAGGTGGCTGCCCCAGGAGAGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WSAEGLVISKEA*FYLGGCPRREG Trigger: CCCTTCTCTCCTGGGGCAGCCACCTAAGTAAAATCATGCTTCTTTGGAAATCACAAGCCCTTCAGCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | CGGTGTGAGACAGGATGGACAAAGTCCCTCTGCACTTaGCCTTGGAATGACCTTTCTCCAGACTTCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RCETGWTKSLCT*PWNDLSPDFSR Trigger: TCTTGAGAAGTCTGGAGAAAGGTCATTCCAAGGTCAAGTGCAGAGGGACTTTGTCCATCCTGTCTCACACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | TCCTGGGTCACTAGGTGTACAAACAGGACAGAGACGTaGGACGTGTCTTTCCTTTGCTTCCATGAAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SWVTRCTNRTET*DVSFLCFHESR Trigger: CCTGCTTTCATGGAAGCAAAGGAAAGACACGTCTCACGTCTCTGTCCTGTTTGTACACCTAGTGACCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR GCA 72 bp | AAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTaGTACACCTCAATGATGGCATCTTTGGCAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KSALKPADTLPI*YTSMMASLASN Trigger: ATTGCTTGCCAAAGATGCCATCATTGAGGTGTAGCAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | CACCAGTACACAAATGACACAAAAGGACACATGGAGTaGCATACAATGGCCAGGCACGCCAAGAGGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HQYTNDTKGHME*HTMARHAKRMR Trigger: TCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCTTTTGTGTCATTTGTGTACTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | TACAACATGCATAGACTACTGACTCCTTCTGAGCCGTaGCGGACGCTCCTGCAATTGTGCTTTACTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YNMHRLLTPSEP*RTLLQLCFTTV Trigger: CACTGTAGTAAAGCACAATTGCAGGAGCGTCCGTCACGGCTCAGAAGGAGTCAGTAGTCTATGCATGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | CATGAGGCTACAGTGCCCAAGGACAGTTGCTGCAAATaGGCTTTTACCACTTGGAAAGGAGAAAAGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HEATVPKDSCCK*AFTTWKGEKGK Trigger: CTTTCCCTTTTCTCCTTTCCAAGTGGTAAAAGCTCATTTGCAGCAACTGTCCTTGGGCACTGTAGCCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CCA 72 bp | TATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATaGAGACTATTCCAGCAGCAGCAGCAGCAGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YHCGLCHEKFKT*RLFQQQQQQPG Trigger: GCCTGGCTGCTGCTGCTGCTGCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATCCTGTTCTGAAGCTGTaGATTGGGAGAGCTGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GPQSGKRAKVILKSQNIYPVLKL*IGRAAI Trigger: AATGGCAGCTCTCCCAATCAACAGCTTCAGAACAGG...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATGGATTGATAACATGGTaGCCAGAAGGAGAAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GPQSGKRAKVILKSQNIYGLITW*PEGEGT Trigger: GGTGCCTTCTCCTTCTGGCAACCATGTTATCAATCC...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTATGGACATTCACCACAATGACTGTGCTGAACTAGAAAACAAGCAGAGACGGACGCTCCTGCAATaGTGCTTTACTACAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NAMDIHHNDCAELENKQRRTLLQ*CFTTVR Trigger: CCTCACTGTAGTAAAGCACAATTGCAGGAGCGTCCG...TCTCTGCTTGTTTTCTAGTTCAGCACAGTCATTGTGGTGAATGTCCATAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | CTGCTTGTCCACAGAGATGTGATGCAGATGGCTAGGTaGTGTCTTGTAATACCTGATACCTGGATAACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLVHRDVMQMAR*CLVIPDTWITC Trigger: ACACGTTATCCAGGTATCAGGTATTACAAGACATCACCTAGCCATCTGCATCACATCTCTGTGGACAAGCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | AGGATGGACAAAGTCCCTCTGCACTTGACCTTGGAATaGCCTTTCTCCAGACTTCTCAAGAAGAATATACAT | + |
|
Preference number: 3 (lower is better) Translates to: RMDKVPLHLTLE*PFSRLLKKNIH Trigger: ATGTATATTCTTCTTGAGAAGTCTGGAGAAAGGTCATTCCAAGGTCAAGTGCAGAGGGACTTTGTCCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR TCA 72 bp | GCCCACCACAGTAAGCTTTGTCACCTTCTGTGTTTTTaGTTAAGGTTTGTAACCACCATTGGGAAGGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: AHHSKLCHLLCF*LRFVTTIGKVL Trigger: TAAGACCTTCCCAATGGTGGTTACAAACCTTAATCAAAAACACAGAAGGTGACAAAGCTTACTGTGGTGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR CCA 72 bp | TTGTATCAGGAAGCTTGTATGATAAAGGTGACGATGTaGTCTGCTGAAGGGCTTGTGATTTCCAAAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LYQEACMIKVTM*SAEGLVISKEA Trigger: TGCTTCTTTGGAAATCACAAGCCCTTCAGCAGACCACATCGTCACCTTTATCATACAAGCTTCCTGATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | GGAAGCTTGTATGATAAAGGTGACGATGTGGTCTGCTaGAGGGCTTGTGATTTCCAAAGAAGCATGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GSLYDKGDDVVC*RACDFQRSMIL Trigger: TAAAATCATGCTTCTTTGGAAATCACAAGCCCTTCAGCAGACCACATCGTCACCTTTATCATACAAGCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR TCA 72 bp | GGATATAGTGTTTGTGTGATCACACCAGTACACAAATaGCACAAAAGGACACATGGAGTGACATACAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GYSVCVITPVHK*HKRTHGVTYNG Trigger: GCCATTGTATGTCACTCCATGTGTCCTTTTGTGTCATTTGTGTACTGGTGTGATCACACAAACACTATATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCAATTCCAAATGTACAAGCACCAGGTACAATGATAGGAACCAAATCTCTCGGAAGTGTATGCCTTTTTaGGTAATAGCTGCTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TNSKCTSTRYNDRNQISRKCMPF*VIAACP Trigger: TGGACAAGCAGCTATTACCAAAAAAGGCATACACTT...CCGAGAGATTTGGTTCCTATCATTGTACCTGGTGCTTGTACATTTGGAATTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTGGCTTATTTTTGGTGTGCAATTATACCAATAGTACATCTCATAGTGAGAGTGCCCAAGGACAGTaGCTGCAAATGAGCTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LFGLFLVCNYTNSTSHSESAQGQ*LQMSFY Trigger: GTAAAAGCTCATTTGCAGCAACTGTCCTTGGGCACT...CTCACTATGAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGAAAGTGTATGCCTTTTTaGGTAATAGCTGCTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: AHFREGDCKHSLSYNMHRKCMPF*VIAACP Trigger: TGGACAAGCAGCTATTACCAAAAAAGGCATACACTT...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTGGCTTATTTTTGGTGTGCAATTATACCAATAGTACATCTCATAGTGAGAAGCTAAGCAGTTTCTaGGACTTATATCACTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFGLFLVCNYTNSTSHSEKLSSF*DLYHCG Trigger: TCCACAGTGATATAAGTCCAAGAAACTGCTTAGCTT...CTCACTATGAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| 3UTR CCA 72 bp | GATCCAGTTAGTGTAATGCACTGTTTGGCTTATTTTTaGTGTGCAATTATACCAATAGTACATCTCATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DPVSVMHCLAYF*CAIIPIVHLIV Trigger: CACTATGAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACACTAACTGGATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGATGCCGCTGTTCCCGTTaGGAGCCGCCGCCGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGCRCSR*EPPPPN Trigger: GTTTGGCGGCGGCGGCTCCCAACGGGAACAGCGGCA...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTTCGGGCACCGCCGCTTaGTACTGGGGTCCCACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPPALRQNEMQRSSLGSSGTAA*YWGPTR Trigger: GCGGGTGGGACCCCAGTACCAAGCGGCGGTGCCCGA...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTCGTGCTCCTCGTCGCTaGACGAGCCCGAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGPPALRQNEMQRSSLGSRAPRR*TSPSCL Trigger: AAGGCAGCTCGGGCTCGTCCAGCGACGAGGAGCACG...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCAGATTGTCTCGTTCTTaGCTGCGCCTTGCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DARTQPSRLLLRPFRPTVRLSRS*LRLASL Trigger: CAAACTGGCAAGGCGCAGTCAAGAACGAGACAATCT...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCGGGGCACCTCCTTTTTaGTTTCCTTGTTTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DARTQPSRLLLRPFRPTVGAPPF*FPCLGQ Trigger: TTGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCC...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACCCTCCCAGGAGTTGCTaGCGCTGTTCCCGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTHGVTYNGQARQEDESYPPRSC*RCSRWE Trigger: CTCCCAACGGGAACAGCGGCAGCAACTCCTGGGAGG...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGATTCTTGACTGCGCCTTaGCAGTTTGGCAGGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGFLTAP*QFGRIE Trigger: TTCGATCCTGCCAAACTGGCAAGGCGCAGTCAAGAA...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGATCCATGTTGTACCCGTaGTTCTCTTTGGCGATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGSMLYP*FSLAIA Trigger: CGCTATCGCCAAAGAGAAGCACGGGTACAACATGGA...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTTGTCTCGTTCTTGACTaGGCCTTGCCAGTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGPPALRQNEMQRSSLGSCLVLD*ALPVWQ Trigger: CTGCCAAACTGGCAAGGCGCAGTCAAGAACGAGACA...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | TATCTTGTGCCTCAGTGTCCCTGTGAGTCACACGCAGAGCGGAGGCTAACTTCACATCTGGAAAGGGGGTaGAGTTGGGCAAGTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLVPQCPCESHAERRLTSHLERG*SWASRP Trigger: TGGCCGACTTGCCCAACTTCACCCCCTTTCCAGATG...TGAAGTTAGCCTCCGCTCTGCGTGTGACTCACAGGGACACTGAGGCACAAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | GGGGATGATGGTGGCAGCTGGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGCGAGCGTTGCATTTTTaGATAACCTCTGGGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GDDGGSWGSRRDGCTLILRALHF*ITSGSR Trigger: CCGACTCCCAGAGGTTATTCAAAAATGCAACGCTCG...CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTCGGGCACCGCCGCTTaGTACTGGGGTCCCACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPQSGKRAKVILKSQNISGTAA*YWGPTR Trigger: GCGGGTGGGACCCCAGTACCAAGCGGCGGTGCCCGA...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGCATCTGGAAAGGGGGTaGAGTTGGGCAAGTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLHLERG*SWASRP Trigger: TGGCCGACTTGCCCAACTTCACCCCCTTTCCAGATG...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGGGCAAGTCGGCCAATaGTTTTTCAATATTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGGQVGQ*FFNIML Trigger: AAGCATAATATTGAAAAATCATTGGCCGACTTGCCC...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | GGGGATGATGGTGGCAGCTGGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGCACTGTTCGTCTGCTTaGTGTTCTGAATCTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDDGGSWGSRRDGCTLILHCSSA*CSESVV Trigger: AACGACAGATTCAGAACATCAAGCAGACGAACAGTG...CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGTACTCGTCCAGTTTTaGTTCAGAAAGACTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGVLVQF*FRKTLI Trigger: AATCAGAGTCTTTCTGAAGCAAAACTGGACGAGTAC...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGAAGCATCCCAAGAGCCTaGTCCATGTTGTACCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAEGEHISSKVAWAQRSIPRA*SMLYPC Trigger: GCACGGGTACAACATGGAGCAGGCTCTTGGGATGCT...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | CAGAATGAGATGCAACGGAGCTCTCTGGGAAGTCGTGCCAACATGGAGGAACGAAGATTGTCTCGTTCTTaGCTGCGCCTTGCCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNEMQRSSLGSRANMEERRLSRS*LRLASL Trigger: CAAACTGGCAAGGCGCAGTCAAGAACGAGACAATCT...TCGTTCCTCCATGTTGGCACGACTTCCCAGAGAGCTCCGTTGCATCTCATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAAAAAAGTTTTTCACCTaGACAACTGACTTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGKKFFT*TTDLFP Trigger: TGGGAACAAGTCAGTTGTTCAGGTGAAAAACTTTTT...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGTGTCTCGTTCTTGACTaGGCCTTGCCAGTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLCLVLD*ALPVWQ Trigger: CTGCCAAACTGGCAAGGCGCAGTCAAGAACGAGACA...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGATCAATATTATGCTTATaGCAAAAGAGCATCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGSILCL*QKSIPR Trigger: TCTTGGGATGCTCTTTTGGCATAAGCATAATATTGA...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTAAACTTCATCTATGTTaGAGCGGCGTCGATAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VGPPALRQNEMQRSSLGSKLHLC*SGVDNL Trigger: TAAATTATCGACGCCGCTTCAACATAGATGAAGTTT...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACGTGACCAGACCAACATaGCAAGATTGTCTCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTHGVTYNGQARQEDESYVTRPT*QDCLVL Trigger: AAGAACGAGACAATCTTGGCATGTTGGTCTGGTCAC...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTTTTGCTTTCCTTGTTTaGGTCAATCTCAATGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGPPALRQNEMQRSSLGSFAFLV*VNLNVN Trigger: GTTGACATTGAGATTGACCCAAACAAGGAAAGCAAA...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCATGCCACCGCCACCGTaGTCCTCGTCGCTGGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: YITVDCVMKSLKHGDYSSMPPPP*SSSLDE Trigger: CTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCAT...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTAAACTTCACCAAACTTaGTATGGATTTATCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGPPALRQNEMQRSSLGSKLHQT*YGFIRK Trigger: CTTCCTGATAAATCCATAGCAAGTTTGGTGAAGTTT...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTGTACGGCGAGAAGCTaGTCTTCCGTTGTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPQSGKRAKVILKSQNICTARS*SSVVQR Trigger: TCGCTGGACAACGGAAGAGCAGCTTCTCGCCGTACA...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | GGGGATGATGGTGGCAGCTGGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGTCACCAAACTTGCTATaGATTTATCAGGAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GDDGGSWGSRRDGCTLILSPNLL*IYQEAF Trigger: AAATGCTTCCTGATAAATCCATAGCAAGTTTGGTGA...CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GCTCACTTTAGAGAAGGCGACTGTAAACACTCATTATCTTACAACATGCATAGACTTCCTCCCAGGAGTTaGTGCCGCTGTTCCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHFREGDCKHSLSYNMHRLPPRS*CRCSRW Trigger: CCAACGGGAACAGCGGCAGCAACTCCTGGGAGGAAG...TCTATGCATGTTGTAAGATAATGAGTGTTTACAGTCGCCTTCTCTAAAGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR GCA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATAGCATCCCAAGAGCCTaGTCCATGTTGTACCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPQSGKRAKVILKSQNIYSIPRA*SMLYPC Trigger: GCACGGGTACAACATGGAGCAGGCTCTTGGGATGCT...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACTGTACGGCGAGAAGCTaGTCTTCCGTTGTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTNGIATTLGCFFSSWSHCTARS*SSVVQR Trigger: TCGCTGGACAACGGAAGAGCAGCTTCTCGCCGTACA...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | CAGAATGAGATGCAACGGAGCTCTCTGGGAAGTCGTGCCAACATGGAGGAACGAAAAAAGTTTTTCACCTaGACAACTGACTTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNEMQRSSLGSRANMEERKKFFT*TTDLFP Trigger: TGGGAACAAGTCAGTTGTTCAGGTGAAAAACTTTTT...TCGTTCCTCCATGTTGGCACGACTTCCCAGAGAGCTCCGTTGCATCTCATTCTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGCTTGAGAAAGAAACATaGCTTTCGGAGGTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLLEKET*LSEVSF Trigger: AAAGGAAACCTCCGAAAGGCATGTTTCTTTCTCAAG...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | ACCAATTCCAAATGTACAAGCACCAGGTACAATGATAGGAACCAAATCTCTCGGGCTTCAGAAAGACTCTaGTTAGGTGACCAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNSKCTSTRYNDRNQISRASERL*LGDQTN Trigger: GTTGGTCTGGTCACCTAATCAGAGTCTTTCTGAAGC...CCGAGAGATTTGGTTCCTATCATTGTACCTGGTGCTTGTACATTTGGAATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTGTGACCAGACCAACATaGCAAGATTGTCTCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPQSGKRAKVILKSQNIVTRPT*QDCLVL Trigger: AAGAACGAGACAATCTTGGCATGTTGGTCTGGTCAC...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | GCTGACCTGACATTTAAAGTCTGCACTCAAACCTGCAGACACCCTCCCCATCTGTCAATATTATGCTTATaGCAAAAGAGCATCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADLTFKVCTQTCRHPPHLSILCL*QKSIPR Trigger: TCTTGGGATGCTCTTTTGGCATAAGCATAATATTGA...CAGATGGGGAGGGTGTCTGCAGGTTTGAGTGCAGACTTTAAATGTCAGGTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAGGTCTACTAGGCCTTCTGAGAATTACACTATGCACAAAGTAGAAACTCGAGCGTTGCATTTTTaGATAACCTCTGGGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRSTRPSENYTMHKVETRALHF*ITSGSR Trigger: CCGACTCCCAGAGGTTATTCAAAAATGCAACGCTCG...AGTTTCTACTTTGTGCATAGTGTAATTCTCAGAAGGCCTAGTAGACCTTCTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CAA 72 bp | CCCAGTCCAAACAAATGGCATTGCCACCACTCTAGGTaGTTTCTTTTCATCTTGGTCTCACTAAGCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSPNKWHCHHSR*FLFILVSLSNK Trigger: TTTGTTGCTTAGTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTGGACTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CAA 72 bp | GTCAGTCTGAGGCGAAGTTTACTTGATACTAAAAACTaGAATCCTGGGTCACTAGGTGTACAAACAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLRRSLLDTKN*NPGSLGVQTGQ Trigger: CTGTCCTGTTTGTACACCTAGTGACCCAGGATTCAAGTTTTTAGTATCAAGTAAACTTCGCCTCAGACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | AATGCTATGGACATTCACCACAATGACTGTGCTGAACTAGAAAACAAGCAGAGACACTGTTCGTCTGCTTaGTGTTCTGAATCTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NAMDIHHNDCAELENKQRHCSSA*CSESVV Trigger: AACGACAGATTCAGAACATCAAGCAGACGAACAGTG...TCTCTGCTTGTTTTCTAGTTCAGCACAGTCATTGTGGTGAATGTCCATAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCGTTCCCAATCACATCTaGGATCGCCTGAAAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YITVDCVMKSLKHGDYSSVPNHI*DRLKIS Trigger: CGAGATTTTCAGGCGATCTCAGATGTGATTGGGAAC...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTTTCTTGACTGCGCCTTaGCAGTTTGGCAGGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFHLGLTKQQTHPLLICFLTAP*QFGRIE Trigger: TTCGATCCTGCCAAACTGGCAAGGCGCAGTCAAGAA...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCGGGGCACCTCCTTTTTaGTTTCCTTGTTTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YITVDCVMKSLKHGDYSSGAPPF*FPCLGQ Trigger: TTGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCC...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR GCA 90 bp | GGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTATCTTGAGAAAGAAACATaGCTTTCGGAGGTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPQSGKRAKVILKSQNIYLEKET*LSEVSF Trigger: AAAGGAAACCTCCGAAAGGCATGTTTCTTTCTCAAG...ATAAATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTGCCAAACTTTTATTCTaGCCATTATTGGGGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSFHLGLTKQQTHPLLICAKLLF*PLLGAA Trigger: CGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGC...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTGCTTCAGAAAGACTCTaGTTAGGTGACCAGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFHLGLTKQQTHPLLICASERL*LGDQTN Trigger: GTTGGTCTGGTCACCTAATCAGAGTCTTTCTGAAGC...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR TCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTGTTCCCAATCACATCTaGGATCGCCTGAAAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSFHLGLTKQQTHPLLICVPNHI*DRLKIS Trigger: CGAGATTTTCAGGCGATCTCAGATGTGATTGGGAAC...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR GCA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACAAACTTCACCAAACTTaGTATGGATTTATCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTNGIATTLGCFFSSWSHKLHQT*YGFIRK Trigger: CTTCCTGATAAATCCATAGCAAGTTTGGTGAAGTTT...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| 3UTR CAA 72 bp | CATGAAAGCAGGGATCCAGTTAGTGTAATGCACTGTTaGGCTTATTTTTGGTGTGCAATTATACCAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HESRDPVSVMHC*AYFWCAIIPIV Trigger: TACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACACTAACTGGATCCCTGCTTTCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR TCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCAAACTTCATCTATGTTaGAGCGGCGTCGATAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: YITVDCVMKSLKHGDYSSKLHLC*SGVDNL Trigger: TAAATTATCGACGCCGCTTCAACATAGATGAAGTTT...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTGTACTCGTCCAGTTTTaGTTCAGAAAGACTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VSFHLGLTKQQTHPLLICVLVQF*FRKTLI Trigger: AATCAGAGTCTTTCTGAAGCAAAACTGGACGAGTAC...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAGGTCTACTAGGCCTTCTGAGAATTACACTATGCACAAAGTAGAAACTTCACCAAACTTGCTATaGATTTATCAGGAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SRRSTRPSENYTMHKVETSPNLL*IYQEAF Trigger: AAATGCTTCCTGATAAATCCATAGCAAGTTTGGTGA...AGTTTCTACTTTGTGCATAGTGTAATTCTCAGAAGGCCTAGTAGACCTTCTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CCA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCTTTGCTTTCCTTGTTTaGGTCAATCTCAATGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YITVDCVMKSLKHGDYSSFAFLV*VNLNVN Trigger: GTTGACATTGAGATTGACCCAAACAAGGAAAGCAAA...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CCA 90 bp | CTGCCGCTGTTCCCGTTGGGAGCCGCCGCCGCCAAACTTTTATTCTaGCCATTATTGGGGGCGGCGGCGGCCGAGGCGGCGGCGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLFPLGAAAAKLLF*PLLGAAAAEAAAAA Trigger: GGCCGCCGCCGCCGCCTCGGCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCTCCCAACGGGAACAGCGGCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | GGGGATGATGGTGGCAGCTGGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGCCTTCCTCCCAGGAGTaGCTGCCGCTGTTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GDDGGSWGSRRDGCTLILPSSQE*LPLFPL Trigger: CAACGGGAACAGCGGCAGCAACTCCTGGGAGGAAGG...CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGACTGCCGCTGTTCCCGTaGGGAGCCGCCGCCGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNTAEGEHISSKVAWAQRLPLFP*GAAAAK Trigger: TTTGGCGGCGGCGGCTCCCAACGGGAACAGCGGCAG...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGAAGCTGCTCTTCCGTaGTCCAGCGAGCGTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGEAALP*SSERCI Trigger: AATGCAACGCTCGCTGGACAACGGAAGAGCAGCTTC...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | GAGGTGTGCAGGCCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAAAGATTGTCTCGTTCTaGACTGCGCCTTGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EVCRPWVPQPLGRMRCNGKIVSF*TAPCQF Trigger: AAACTGGCAAGGCGCAGTCAAGAACGAGACAATCTT...TCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGGCCTGCACACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACGTCGGGCACCGCCGCTaGGTACTGGGGTCCCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: QTNGIATTLGCFFSSWSHVGHRR*VLGSHP Trigger: CGGGTGGGACCCCAGTACCAAGCGGCGGTGCCCGAC...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | GATGCTAGGACACAGCCCAGCCGGCTGCTCCTCAGGCCCTTCAGGCCCACAGTCTGCTCAAATAAGACTTaGTCTTCTACAGTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: DARTQPSRLLLRPFRPTVCSNKT*SSTVHS Trigger: TGAGTGGACTGTAGAAGACAAAGTCTTATTTGAGCA...GACTGTGGGCCTGAAGGGCCTGAGGAGCAGCCGGCTGGGCTGTGTCCTAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | AGGACACATGGAGTGACATACAATGGCCAGGCACGCCAAGAGGATGAGAGCTACTCCTCCTCCGGGATCTaGATGGAGCTTTCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTHGVTYNGQARQEDESYSSSGI*MELSGD Trigger: GTCCCCAGAAAGCTCCATCAAGATCCCGGAGGAGGA...GTAGCTCTCATCCTCTTGGCGTGCCTGGCCATTGTATGTCACTCCATGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | GGGGATGATGGTGGCAGCTGGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGAAGATTGTCTCGTTCTaGACTGCGCCTTGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GDDGGSWGSRRDGCTLILKIVSF*TAPCQF Trigger: AAACTGGCAAGGCGCAGTCAAGAACGAGACAATCTT...CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTCGGGATTACTGCCGTTaGTTTCTTCCAGTTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGPPALRQNEMQRSSLGSRDYCR*FLPVHP Trigger: AGGATGAACTGGAAGAAACAAACGGCAGTAATCCCG...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGATCCTCCTCCGGGATCTaGATGGAGCTTTCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LNTAEGEHISSKVAWAQRSSSGI*MELSGD Trigger: GTCCCCAGAAAGCTCCATCAAGATCCCGGAGGAGGA...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CCA 90 bp | AGAAGCAGCCTCATCTTCCTCCTCCGGGATCTTGATGGAGCTTTCTaGGGACTTGACAGGTTTCTGGTTAGCAGGTCCATTGGTCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSLIFLLRDLDGAF*GLDRFLVSRSIGLV Trigger: GACGAGACCAATGGACCTGCTAACCAGAAACCTGTCAAGTCCCCAGAAAGCTCCATCAAGATCCCGGAGGAGGAAGATGAGGCTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGAGTTCTTGACTGCGCCTaGCCAGTTTGGCAGGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: LNTAEGEHISSKVAWAQRVLDCA*PVWQDR Trigger: TCGATCCTGCCAAACTGGCAAGGCGCAGTCAAGAAC...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | CCGTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAATGTACTCGTCCAGTTTaGCTTCAGAAAGACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PWVPQPLGRMRCNGALWECTRPV*LQKDSD Trigger: ATCAGAGTCTTTCTGAAGCAAAACTGGACGAGTACA...TTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CCA 90 bp | TCCTCCGGGATCTTGATGGAGCTTTCTGGGGACTTGACAGGTTTCTaGTTAGCAGGTCCATTGGTCTCGTCTTTCCCATGTTCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGILMELSGDLTGF*LAGPLVSSFPCSAS Trigger: GGAAGCAGAACATGGGAAAGACGAGACCAATGGACCTGCTAACCAGAAACCTGTCAAGTCCCCAGAAAGCTCCATCAAGATCCCGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCGTCGGGCACCGCCGCTaGGTACTGGGGTCCCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: YITVDCVMKSLKHGDYSSVGHRR*VLGSHP Trigger: CGGGTGGGACCCCAGTACCAAGCGGCGGTGCCCGAC...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCCCCCAGCCCTTAGGCAGAATGAGATGCAACGGAGCTCTCTGGGAAGTTGTACTCGTCCAGTTTaGCTTCAGAAAGACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGPPALRQNEMQRSSLGSCTRPV*LQKDSD Trigger: ATCAGAGTCTTTCTGAAGCAAAACTGGACGAGTACA...ACTTCCCAGAGAGCTCCGTTGCATCTCATTCTGCCTAAGGGCTGGGGGACCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CAGAATGAGATGCAACGGAGCTCTCTGGGAAGTCGTGCCAACATGGAGGAACGACGGGATTACTGCCGTTaGTTTCTTCCAGTTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QNEMQRSSLGSRANMEERRDYCR*FLPVHP Trigger: AGGATGAACTGGAAGAAACAAACGGCAGTAATCCCG...TCGTTCCTCCATGTTGGCACGACTTCCCAGAGAGCTCCGTTGCATCTCATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | TATCTTGTGCCTCAGTGTCCCTGTGAGTCACACGCAGAGCGGAGGCTAACTTCAATATTTCCTAATGGCTaGTACGGCGAGAAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YLVPQCPCESHAERRLTSIFPNG*YGEKLL Trigger: GAGCAGCTTCTCGCCGTACAAGCCATTAGGAAATAT...TGAAGTTAGCCTCCGCTCTGCGTGTGACTCACAGGGACACTGAGGCACAAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | GGGGATGATGGTGGCAGCTGGGGATCAAGAAGAGATGGGTGCACCCTCATCCTGTTTTGCTTTCCTTGTTaGGGTCAATCTCAATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GDDGGSWGSRRDGCTLILFCFPC*GQSQCQ Trigger: TTGACATTGAGATTGACCCAAACAAGGAAAGCAAAA...CAGGATGAGGGTGCACCCATCTCTTCTTGATCCCCAGCTGCCACCATCATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CCA 90 bp | CTGCTCTTCCGTTGTCCAGCGAGCGTTGCATTTTTGAATAACCTCTaGGAGTCGGTAAGGCTCTATCCCACCATCAAGCTTCTCTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLFRCPASVAFLNNL*ESVRLYPTIKLLFK Trigger: CTTAAAGAGAAGCTTGATGGTGGGATAGAGCCTTACCGACTCCCAGAGGTTATTCAAAAATGCAACGCTCGCTGGACAACGGAAGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTGAAGCTGCTCTTCCGTaGTCCAGCGAGCGTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SGPQSGKRAKVILKSQNIEAALP*SSERCI Trigger: AATGCAACGCTCGCTGGACAACGGAAGAGCAGCTTC...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | GCAATTATACCAATAGTACATCTCATAGTGAGAAAGACGAAGTGGGCGGAGCTGGGGGGCACCTCCTTTTaGCTTTCCTTGTTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIIPIVHLIVRKTKWAELGGTSF*LSLFGS Trigger: TGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCCC...CAGCTCCGCCCACTTCGTCTTTCTCACTATGAGATGTACTATTGGTATAATTGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | CTCAACACTGCTGAGGGGGAACACATCTCAAGCAAAGTAGCCTGGGCACAAAGAAGCCTCCACATCTTCTaGAGAAAGAAACATGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LNTAEGEHISSKVAWAQRSLHIF*RKKHAF Trigger: AAAGGCATGTTTCTTTCTCAAGAAGATGTGGAGGCT...TCTTTGTGCCCAGGCTACTTTGCTTGAGATGTGTTCCCCCTCAGCAGTGTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CCA 90 bp | AGGAACTGTCTCTGTAGGGGGCACCTCCTTTTTGCTTTCCTTGTTTaGGTCAATCTCAATGTCAACGGGATTACTGCCGTTTGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNCLCRGHLLFAFLV*VNLNVNGITAVCFF Trigger: GAAGAAACAAACGGCAGTAATCCCGTTGACATTGAGATTGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCCCTACAGAGACAGTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACGGGGGCACCTCCTTTTaGCTTTCCTTGTTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTNGIATTLGCFFSSWSHGGTSF*LSLFGS Trigger: TGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCCC...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS TCA 90 bp | GTGGTCGCAGCAGTAGCATTAGCAGACACAGCCTCCACATCTTCTTaGGAAAGAAACATGCCTTTCGGAGGTTTCCTTTTTGCTCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: VVAAVALADTASTSS*ERNMPFGGFLFALF Trigger: AAATAGAGCAAAAAGGAAACCTCCGAAAGGCATGTTTCTTTCTCAAGAAGATGTGGAGGCTGTGTCTGCTAATGCTACTGCTGCGACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTAGCCTCCACATCTTCTaGAGAAAGAAACATGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPQSGKRAKVILKSQNISLHIF*RKKHAF Trigger: AAAGGCATGTTTCTTTCTCAAGAAGATGTGGAGGCT...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACTGCTCAAATAAGACTTaGTCTTCTACAGTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTNGIATTLGCFFSSWSHCSNKT*SSTVHS Trigger: TGAGTGGACTGTAGAAGACAAAGTCTTATTTGAGCA...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | TCAGGCCCACAGTCTGGTAAGAGAGCAAAAGTGATTCTGAAGTCTCAGAACATTTTTTGCTTTCCTTGTTaGGGTCAATCTCAATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SGPQSGKRAKVILKSQNIFCFPC*GQSQCQ Trigger: TTGACATTGAGATTGACCCAAACAAGGAAAGCAAAA...AATGTTCTGAGACTTCAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | CAAACAAATGGCATTGCCACCACTCTAGGTTGTTTCTTTTCATCTTGGTCTCACTCCTTTTTGCTTTCCTaGTTTGGGTCAATCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QTNGIATTLGCFFSSWSHSFLLS*FGSISM Trigger: CATTGAGATTGACCCAAACAAGGAAAGCAAAAAGGA...GTGAGACCAAGATGAAAAGAAACAACCTAGAGTGGTGGCAATGCCATTTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTATATTTCCTAATGGCTaGTACGGCGAGAAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSFHLGLTKQQTHPLLICIFPNG*YGEKLL Trigger: GAGCAGCTTCTCGCCGTACAAGCCATTAGGAAATAT...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS-3UTR CAA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCTCCTTTTTGCTTTCCTaGTTTGGGTCAATCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YITVDCVMKSLKHGDYSSSFLLS*FGSISM Trigger: CATTGAGATTGACCCAAACAAGGAAAGCAAAAAGGA...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | TATATCACTGTGGACTGTGTCATGAAAAGTTTAAAACATGGAGACTATTCCAGCTTTATCAGGAAGCATTaGCTGGATCCTATGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YITVDCVMKSLKHGDYSSFIRKH*LDPMKS Trigger: ACTTTTCATAGGATCCAGCAAATGCTTCCTGATAAA...GCTGGAATAGTCTCCATGTTTTAAACTTTTCATGACACAGTCCACAGTGATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTTTCATCTTGGTCTCACTAAGCAACAAACACATCCATTACTTATCTGTTTTATCAGGAAGCATTaGCTGGATCCTATGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSFHLGLTKQQTHPLLICFIRKH*LDPMKS Trigger: ACTTTTCATAGGATCCAGCAAATGCTTCCTGATAAA...ACAGATAAGTAATGGATGTGTTTGTTGCTTAGTGAGACCAAGATGAAAAGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS GCA 72 bp | CGCTGGACGAGCCCGAGCTGCCTTCCTCCCAGGAGTTaGTGCCGCTGTTCCCGTTGGGAGCCGCCGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWTSPSCLPPRS*CRCSRWEPPPP Trigger: TGGCGGCGGCGGCTCCCAACGGGAACAGCGGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGCTCGTCCAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CAA 72 bp | TCGCTGGACGAGCCCGAGCTGCCTTCCTCCCAGGAGTaGCTGCCGCTGTTCCCGTTGGGAGCCGCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLDEPELPSSQE*LPLFPLGAAAA Trigger: GGCGGCGGCGGCTCCCAACGGGAACAGCGGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGCTCGTCCAGCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CCA 72 bp | CCACCCGCATGCCACCGCCACCGTGCTCCTCGTCGCTaGACGAGCCCGAGCTGCCTTCCTCCCAGGAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPACHRHRAPRR*TSPSCLPPRSC Trigger: GCAACTCCTGGGAGGAAGGCAGCTCGGGCTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGCGGGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CCA 72 bp | TTGGCAGGATCGAAGTCGGGCACCGCCGCTTGGTACTaGGGTCCCACCCGCATGCCACCGCCACCGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAGSKSGTAAWY*GPTRMPPPPCS Trigger: GGAGCACGGTGGCGGTGGCATGCGGGTGGGACCCCAGTACCAAGCGGCGGTGCCCGACTTCGATCCTGCCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CCA 72 bp | TTCCCGTTGGGAGCCGCCGCCGCCAAACTTTTATTCTaGCCATTATTGGGGGCGGCGGCGGCCGAGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FPLGAAAAKLLF*PLLGAAAAEAA Trigger: CGCCGCCTCGGCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCTCCCAACGGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084968.14 |
||
| CDS CAA 72 bp | TCCTCCTCCGGGATCTTGATGGAGCTTTCTGGGGACTaGACAGGTTTCTGGTTAGCAGGTCCATTGGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSGILMELSGD*TGFWLAGPLVS Trigger: CGAGACCAATGGACCTGCTAACCAGAAACCTGTCAAGTCCCCAGAAAGCTCCATCAAGATCCCGGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CAA 90 bp | GCCTCATCTTCCTCCTCCGGGATCTTGATGGAGCTTTCTGGGGACTaGACAGGTTTCTGGTTAGCAGGTCCATTGGTCTCGTCTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSSGILMELSGD*TGFWLAGPLVSSFP Trigger: TGGGAAAGACGAGACCAATGGACCTGCTAACCAGAAACCTGTCAAGTCCCCAGAAAGCTCCATCAAGATCCCGGAGGAGGAAGATGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CAA 72 bp | AAGCTGCTCTTCCGTTGTCCAGCGAGCGTTGCATTTTaGAATAACCTCTGGGAGTCGGTAAGGCTCTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: KLLFRCPASVAF*NNLWESVRLYP Trigger: GGGATAGAGCCTTACCGACTCCCAGAGGTTATTCAAAAATGCAACGCTCGCTGGACAACGGAAGAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CCA 72 bp | CGTTGTCCAGCGAGCGTTGCATTTTTGAATAACCTCTaGGAGTCGGTAAGGCTCTATCCCACCATCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RCPASVAFLNNL*ESVRLYPTIKL Trigger: AAGCTTGATGGTGGGATAGAGCCTTACCGACTCCCAGAGGTTATTCAAAAATGCAACGCTCGCTGGACAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CAA 72 bp | TCTGGGGACTTGACAGGTTTCTGGTTAGCAGGTCCATaGGTCTCGTCTTTCCCATGTTCTGCTTCCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGDLTGFWLAGP*VSSFPCSASHS Trigger: AGAATGGGAAGCAGAACATGGGAAAGACGAGACCAATGGACCTGCTAACCAGAAACCTGTCAAGTCCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CCA 72 bp | CTCTGTAGGGGGCACCTCCTTTTTGCTTTCCTTGTTTaGGTCAATCTCAATGTCAACGGGATTACTGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LCRGHLLFAFLV*VNLNVNGITAV Trigger: AACGGCAGTAATCCCGTTGACATTGAGATTGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCCCTACAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CAA 90 bp | CGTGGTCGCAGCAGTAGCATTAGCAGACACAGCCTCCACATCTTCTaGAGAAAGAAACATGCCTTTCGGAGGTTTCCTTTTTGCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: RGRSSSISRHSLHIF*RKKHAFRRFPFCSI Trigger: AATAGAGCAAAAAGGAAACCTCCGAAAGGCATGTTTCTTTCTCAAGAAGATGTGGAGGCTGTGTCTGCTAATGCTACTGCTGCGACCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
||
| CDS CAA 90 bp | ATGGAGCTTTCTGGGGACTTGACAGGTTTCTGGTTAGCAGGTCCATaGGTCTCGTCTTTCCCATGTTCTGCTTCCCATTCTTGTAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: MELSGDLTGFWLAGP*VSSFPCSASHSCKT Trigger: AGTTTTACAAGAATGGGAAGCAGAACATGGGAAAGACGAGACCAATGGACCTGCTAACCAGAAACCTGTCAAGTCCCCAGAAAGCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| CDS CAA 72 bp | ACTGTCTCTGTAGGGGGCACCTCCTTTTTGCTTTCCTaGTTTGGGTCAATCTCAATGTCAACGGGATTACTG | + |
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Preference number: 6 (lower is better) Translates to: TVSVGGTSFLLS*FGSISMSTGLL Trigger: CAGTAATCCCGTTGACATTGAGATTGACCCAAACAAGGAAAGCAAAAAGGAGGTGCCCCCTACAGAGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| CDS TCA 72 bp | TTCTCTTTAAGAGCACTGTTCGTCTGCTTGATGTTCTaGATCTGTCGTTTGATGGAGACCAGCTCCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: FSLRALFVCLMF*ICRLMETSSMS Trigger: GGACATGGAGCTGGTCTCCATCAAACGACAGATTCAGAACATCAAGCAGACGAACAGTGCTCTTAAAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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| CDS CAA 72 bp | AGCAGTAGCATTAGCAGACACAGCCTCCACATCTTCTaGAGAAAGAAACATGCCTTTCGGAGGTTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSISRHSLHIF*RKKHAFRRFPF Trigger: AAAAGGAAACCTCCGAAAGGCATGTTTCTTTCTCAAGAAGATGTGGAGGCTGTGTCTGCTAATGCTACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084968.14 ENSMUST00000116388.4 |
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