Pregenerated sensors for RCL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024785Ensembl transcript IDs: ENSMUST00000064393.6, ENSMUST00000235900.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATaGACAGCAGAGCCTGACGTTGTACAGGATCACTTGAGGGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: LDLVPVVLRIFLLHP*TAEPDVVQDHLRVL Trigger: CAAGACCCTCAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR CCA 90 bp | AAGACGAGAGAGGGAACCAGTGCCCCAACTTCTGGCACAACAGACTaGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTAC | + |
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Preference number: 1 (lower is better) Translates to: KTREGTSAPTSGTTD*RSSTHTVTLSHKPY Trigger: GTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTGTTGTGCCAGAAGTTGGGGCACTGGTTCCCTCTCTCGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR TCA 90 bp | TGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTaGCGTTGTACAGGATCACTTGAGGGTCTTGCTCAGGTTAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: CGPSHLSASSMHSRA*RCTGSLEGLAQVRE Trigger: TTCTCTAACCTGAGCAAGACCCTCAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR GCA 90 bp | ATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTATTTaGAAATCAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: IGEAAGSHVGETACI*KSVFSVEKKVCNVK Trigger: CTTAACATTACAGACTTTCTTTTCCACTGAAAATACTGATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGTCCTTCGCATCTTTCTaGTTCATCCATGCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TAWASEECHWRSSWKSRGSFASF*FIHAQQ Trigger: CTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGA...CCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGATGGACTTGGTCCCTGTaGTCCTTCGCATCTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GLGPCGPSHLSASSMHSRWTWSL*SFASFC Trigger: GCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCA...TCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CAA 90 bp | CTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGATCACTaGAGGGTCTTGCTCAGGTTAGAGAAGCCAATACCAACGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLHPCTAEPDVVQDH*RVLLRLEKPIPTQV Trigger: GACCTGCGTTGGTATTGGCTTCTCTAACCTGAGCAAGACCCTCAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGTGGAAGCCCACAGCCTaGGCCTCCGAGGAATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QTGGLLHTLSRCHINPTQWKPTA*ASEECH Trigger: ATGACATTCCTCGGAGGCCCAGGCTGTGGGCTTCCA...CTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CAA 90 bp | CCATGCACAGCAGAGCCTGACGTTGTACAGGATCACTTGAGGGTCTaGCTCAGGTTAGAGAAGCCAATACCAACGCAGGTCATTAGCACT | + |
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Preference number: 2 (lower is better) Translates to: PCTAEPDVVQDHLRV*LRLEKPIPTQVIST Trigger: AGTGCTAATGACCTGCGTTGGTATTGGCTTCTCTAACCTGAGCAAGACCCTCAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCAGAGAGAGGGAACCAGTaGCCCAACTTCTGGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: LLHTLSRCHINPTQSHNPERGNQ*PNFWHN Trigger: GTTGTGCCAGAAGTTGGGGCACTGGTTCCCTCTCTC...TGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGCATTGGAGAAGCAGCTaGAAGTCACGTGGGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QTGGLLHTLSRCHINPTQHWRSS*KSRGRD Trigger: GTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATG...CTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGGAGACAGCTTGTATTTaGAAATCAGTATTTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TAWASEECHWRSSWKSRGETACI*KSVFSV Trigger: CACTGAAAATACTGATTTGCAAATACAAGCTGTCTC...CCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR GCA 90 bp | CTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCAAAGTCCTTCGCATCTTTCTaGTTCATCCATGCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHTLSRCHINPTQSHNPKSFASF*FIHAQQ Trigger: CTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGA...CTTTGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CAA 90 bp | ACTTCTGGCACAACAGACTGGAGGTCTTCTACACACACTGTCACGTaGTCACATAAACCCTACACAGAGCCACAATCCAAAGATGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TSGTTDWRSSTHTVT*SHKPYTEPQSKDEE Trigger: TTCTTCATCTTTGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTGTTGTGCCAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR CCA 90 bp | AAATCAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCTGGACTTGGTCCCTGTaGTCCTTCGCATCTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KSVFSVEKKVCNVKRPPVWTWSL*SFASFC Trigger: GCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCA...GACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR GCA 90 bp | AAACCCTACACAGAGCCACAATCCAAAGATGAAGAAGAGCTGCTGGGATACTGTGAGACAGCTTGTATTTaGAAATCAGTATTTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: KPYTEPQSKDEEELLGYCETACI*KSVFSV Trigger: CACTGAAAATACTGATTTGCAAATACAAGCTGTCTC...ACAGTATCCCAGCAGCTCTTCTTCATCTTTGGATTGTGGCTCTGTGTAGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CCA 72 bp | AAGAGGCCGCCTGTCCTGGATGGACATGCCTGGACTTaGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: KRPPVLDGHAWT*SLWSFASFCFI Trigger: GATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAGGCATGTCCATCCAGGACAGGCGGCCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CCA 72 bp | AATGTTAAGAGGCCGCCTGTCCTGGATGGACATGCCTaGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: NVKRPPVLDGHA*TWSLWSFASFC Trigger: GCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAGGCATGTCCATCCAGGACAGGCGGCCTCTTAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGGTTGTACAGGATCACTaGAGGGTCTTGCTCAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: TAWASEECHWRSSWKSRGVVQDH*RVLLRL Trigger: TAACCTGAGCAAGACCCTCAAGTGATCCTGTACAAC...CCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR CCA 72 bp | GCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTaGAAGTCACGTGGGAGAGACAGCTTGTATTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: AWASEECHWRSS*KSRGRDSLYLQ Trigger: TTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR GCA 72 bp | GTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATaGACAGCAGAGCCTGACGTTGTACAGGATCACTTG | + |
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Preference number: 3 (lower is better) Translates to: VPVVLRIFLLHP*TAEPDVVQDHL Trigger: CAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR TCA 72 bp | TCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTaGCGTTGTACAGGATCACTTGAGGGTCTTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: SHLSASSMHSRA*RCTGSLEGLAQ Trigger: CTGAGCAAGACCCTCAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| 3UTR-3UTR CAA 90 bp | GACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCTCCGAGGAATGTCATaGGAGAAGCAGCTGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: DWRSSTHTVTLSHKPYTELRGMS*EKQLEV Trigger: GACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAG...CTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCATACCTGGGATACAGAAAACATTTAAGACATGTCTGCCCTCCCCATCCCCTCCGAGGAATGTCATaGGAGAAGCAGCTGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: MPYLGYRKHLRHVCPPHPLRGMS*EKQLEV Trigger: GACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAG...GGGATGGGGAGGGCAGACATGTCTTAAATGTTTTCTGTATCCCAGGTATGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR TCA 72 bp | CCAACCACCAGGCCCACACAAACACAAGTTACCATGTaGGGTATAGCATGTGCCCATGCAAGCAAATTATTC | + |
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Preference number: 3 (lower is better) Translates to: PTTRPTQTQVTM*GIACAHASKLF Trigger: GAATAATTTGCTTGCATGGGCACATGCTATACCTCACATGGTAACTTGTGTTTGTGTGGGCCTGGTGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR GCA 72 bp | AACACAAGTTACCATGTGAGGTATAGCATGTGCCCATaGAAGCAAATTATTCCTAAGACGAGAGAGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: NTSYHVRYSMCP*KQIIPKTREGT Trigger: GGTTCCCTCTCTCGTCTTAGGAATAATTTGCTTGCATGGGCACATGCTATACCTCACATGGTAACTTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CCA 72 bp | CGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTaGGAGAGACAGCTTGTATTTGCAAATCAGTATTTT | + |
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Preference number: 3 (lower is better) Translates to: RGMSLEKQLEVT*ERQLVFANQYF Trigger: AAAATACTGATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | TCTAGCAGCGTGGCCACTCACGGAGGGCCCCTCCTCCAGGTGAGTCTGGAAGCCGTCCTCGGGAAGCACTaGTGCTCCCTGGCCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSSVATHGGPLLQVSLEAVLGKH*CSLALG Trigger: CCCCAGGGCCAGGGAGCAGCAGTGCTTCCCGAGGAC...GGCTTCCAGACTCACCTGGAGGAGGGGCCCTCCGTGAGTGGCCACGCTGCTAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR TCA 90 bp | AGCCCACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACCCCCGCGTAGCTGAGTaGGTGCGCCTGGGTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SPQPGPPRNVIGEAAGSHPRVAE*VRLGRH Trigger: ATGGCGACCCAGGCGCACTCACTCAGCTACGCGGGG...GTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGTGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | TCTAGCAGCGTGGCCACTCACGGAGGGCCCCTCCTCCAGGTGAGTCTGGAAGCCCCTGGGTCTGTGAGCTaGACAGGCTTCAGGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSVATHGGPLLQVSLEAPGSVS*TGFRTF Trigger: GAAGGTCCTGAAGCCTGTCCAGCTCACAGACCCAGG...GGCTTCCAGACTCACCTGGAGGAGGGGCCCTCCGTGAGTGGCCACGCTGCTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | CCTGGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCGTCGCCCGCTCAGGGTaGACAGGACCAGCCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PGLGPCGPSHLSASSMHSVARSG*TGPAAG Trigger: GCCAGCGGCTGGTCCTGTCCACCCTGAGCGGGCGAC...GCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | AGCCCACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGCTGCTCCCTGGCCCTaGGGATTGGAGGCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SPQPGPPRNVIGEAAGSHAAPWP*GLEASS Trigger: GGAACTGGCCTCCAATCCCCAGGGCCAGGGAGCAGC...GTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | AGCCCACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACAGGACACTGCAGTCGTaGTCCACAGACCCGCCATAC | + |
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Preference number: 4 (lower is better) Translates to: SPQPGPPRNVIGEAAGSHRTLQS*STDPPY Trigger: GTATGGCGGGTCTGTGGAGCACGACTGCAGTGTCCT...GTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGCTTTGCACAGTTCCTaGCGAGGTCCTCGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QPGPPRNVIGEAAGSHVGALHSS*RGPREA Trigger: TGCTTCCCGAGGACCTCGGCAGGAACTGTGCAAAGC...TCCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | ACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGGCTTTGCACAGTTCCTaGCGAGGTCCTCGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TAWASEECHWRSSWKSRGALHSS*RGPREA Trigger: TGCTTCCCGAGGACCTCGGCAGGAACTGTGCAAAGC...CCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR TCA 90 bp | CAATCCAAAGATGAAGAAGAGCTGCTGGGATACTGTCTAGCAGCGTGGCCACTCTACACCCCGCGTAGCTaGGTGAGTGCGCCTGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: QSKDEEELLGYCLAAWPLYTPRS*VSAPGS Trigger: CGACCCAGGCGCACTCACTCAGCTACGCGGGGTGTA...GAGTGGCCACGCTGCTAGACAGTATCCCAGCAGCTCTTCTTCATCTTTGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | GCCATACCTGGGATACAGAAAACATTTAAGACATGTCTGCCCTCCCCATCCCAAGTCGCCCGCTCAGGGTaGACAGGACCAGCCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AIPGIQKTFKTCLPSPSQVARSG*TGPAAG Trigger: GCCAGCGGCTGGTCCTGTCCACCCTGAGCGGGCGAC...TTGGGATGGGGAGGGCAGACATGTCTTAAATGTTTTCTGTATCCCAGGTATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | GGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGACCTGGCCCTGGGGATTaGAGGCCAGTTCCGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: GLGPCGPSHLSASSMHSRPGPGD*RPVPHS Trigger: TGAGTGCGGAACTGGCCTCCAATCCCCAGGGCCAGG...TCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | CCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTGACAGGACCAGCCGCTaGCGCAAGAAGTTACACCCC | + |
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Preference number: 4 (lower is better) Translates to: PRNVIGEAAGSHVGETACDRTSR*RKKLHP Trigger: GGGGTGTAACTTCTTGCGCCAGCGGCTGGTCCTGTC...ACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR TCA 90 bp | TCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTATTTGCAAATCCCCGCGTAGCTGAGTaGGTGCGCCTGGGTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLEKQLEVTWERQLVFANPRVAE*VRLGRH Trigger: ATGGCGACCCAGGCGCACTCACTCAGCTACGCGGGG...ATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | TTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTAGGACACTGCAGTCGTaGTCCACAGACCCGCCATAC | + |
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Preference number: 4 (lower is better) Translates to: LVPVVLRIFLLHPCTAEPRTLQS*STDPPY Trigger: GTATGGCGGGTCTGTGGAGCACGACTGCAGTGTCCT...AGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | GACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGAGCACTGCTGCTCCCTaGCCCTGGGGATTGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DWRSSTHTVTLSHKPYTESTAAP*PWGLEA Trigger: GGCCTCCAATCCCCAGGGCCAGGGAGCAGCAGTGCT...CTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR TCA 90 bp | CTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCATACACCCCGCGTAGCTaGGTGAGTGCGCCTGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LLHTLSRCHINPTQSHNPYTPRS*VSAPGS Trigger: CGACCCAGGCGCACTCACTCAGCTACGCGGGGTGTA...TGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCATCCCAACCACCAGGCCCACACAAACACAAGTTACCATGTGAGGTAGTTGAGGATGCTCCTTaGGGAATCCACGATCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: PSPSQPPGPHKHKLPCEVVEDAP*GIHDPV Trigger: AACCGGATCGTGGATTCCGCAAGGAGCATCCTCAAC...TACCTCACATGGTAACTTGTGTTTGTGTGGGCCTGGTGGTTGGGATGGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | AAGCCCACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCAACTTTGGAAACGTCCTaGTGTCCAAGGGTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPTAWASEECHWRSSWKSTLETS*CPRVMS Trigger: GCTCATGACCCTTGGACAGCAGGACGTTTCCAAAGT...TGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | GACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCGGGTTGTCGTCCCTaGCGCGAATCCTGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: DWRSSTHTVTLSHKPYTEPGCRP*RESCGS Trigger: AGATCCGCAGGATTCGCGCCAGGGACGACAACCCGG...CTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGACATGCCTGGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCGGTCAACCTGGTCATTaGTCACTCCTCGCAGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LDGHAWTWSLWSFASFCFGQPGH*SLLAER Trigger: TCGTTCTGCGAGGAGTGACCAATGACCAGGTTGACC...GAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAGGCATGTCCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | TCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGCGACAGCCCAAAGCCTaGAGACTTCCCAGAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEECHWRSSWKSRGRDSLRQPKA*RLPRTD Trigger: GTCAGTTCTGGGAAGTCTCCAGGCTTTGGGCTGTCG...CAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGGACAGGACCAGCCGCTaGCGCAAGAAGTTACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTGGLLHTLSRCHINPTQDRTSR*RKKLHP Trigger: GGGGTGTAACTTCTTGCGCCAGCGGCTGGTCCTGTC...CTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGACCGAAGGGTCAACCTaGTCATTGGTCACTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFASFCFIHAQQSLTLYRTEGST*SLVTPR Trigger: GCGAGGAGTGACCAATGACCAGGTTGACCCTTCGGT...CCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGCGACAGCCCAAAGCCTaGAGACTTCCCAGAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLRIFLLHPCTAEPDVVQRQPKA*RLPRTD Trigger: GTCAGTTCTGGGAAGTCTCCAGGCTTTGGGCTGTCG...CTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | CTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCAAAGCCTGGCCCTGGGGATTaGAGGCCAGTTCCGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLSRCHINPTQSHNPKPGPGD*RPVPHS Trigger: TGAGTGCGGAACTGGCCTCCAATCCCCAGGGCCAGG...CTTTGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | CAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCCTGGAGCACTGCTGCTCCCTaGCCCTGGGGATTGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYFQWKRKSVMLRGRLSWSTAAP*PWGLEA Trigger: GGCCTCCAATCCCCAGGGCCAGGGAGCAGCAGTGCT...CCAGGACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR GCA 90 bp | CCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTACTTTGGAAACGTCCTaGTGTCCAAGGGTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRNVIGEAAGSHVGETACTLETS*CPRVMS Trigger: GCTCATGACCCTTGGACAGCAGGACGTTTCCAAAGT...ACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGACATTCCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGCCGCTTGATTTTTCCTaGGTCTGTGAGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRIFLLHPCTAEPDVVQPLDFS*VCELDR Trigger: CCTGTCCAGCTCACAGACCCAGGAAAAATCAAGCGG...CTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCCACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGTCAAGCAGAACTAGACTTTaGTTGGTCGAGTCTACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPTAWASEECHWRSSWKSSRTRL*LVESTH Trigger: ATGCGTAGACTCGACCAACCAAAGTCTAGTTCTGCT...TGACTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGTGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGTCCCAGCAGGACTTTaGAAACGTCCTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLRIFLLHPCTAEPDVVQVPAGL*KRPAVQ Trigger: TTGGACAGCAGGACGTTTCCAAAGTCCTGCTGGGAC...CTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR TCA 90 bp | GCCATACCTGGGATACAGAAAACATTTAAGACATGTCTGCCCTCCCCATCCCAATTCTATCGTGTAGGGTaGGAGTGGTCCCAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AIPGIQKTFKTCLPSPSQFYRVG*EWSQQD Trigger: GTCCTGCTGGGACCACTCTCACCCTACACGATAGAA...TTGGGATGGGGAGGGCAGACATGTCTTAAATGTTTTCTGTATCCCAGGTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064393.6 |
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| CDS-3UTR GCA 90 bp | GGATCACTTGAGGGTCTTGCTCAGGTTAGAGAAGCCAATACCAACGCAGGTCATGTTGAGGATGCTCCTTaGGGAATCCACGATCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLEGLAQVREANTNAGHVEDAP*GIHDPV Trigger: AACCGGATCGTGGATTCCGCAAGGAGCATCCTCAAC...ATGACCTGCGTTGGTATTGGCTTCTCTAACCTGAGCAAGACCCTCAAGTGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCACCTGGGTCTGTGAGCTaGACAGGCTTCAGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLSRCHINPTQSHNPPGSVS*TGFRTF Trigger: GAAGGTCCTGAAGCCTGTCCAGCTCACAGACCCAGG...TGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCCGCTGCTCCCTGGCCCTaGGGATTGGAGGCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQYFQWKRKSVMLRGRLSAAPWP*GLEASS Trigger: GGAACTGGCCTCCAATCCCCAGGGCCAGGGAGCAGC...GGACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | GGATCACTTGAGGGTCTTGCTCAGGTTAGAGAAGCCAATACCAACGCAGGTCATGTCCCAGCAGGACTTTaGAAACGTCCTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLEGLAQVREANTNAGHVPAGL*KRPAVQ Trigger: TTGGACAGCAGGACGTTTCCAAAGTCCTGCTGGGAC...ATGACCTGCGTTGGTATTGGCTTCTCTAACCTGAGCAAGACCCTCAAGTGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
||
| 3UTR CAA 72 bp | CCATGCACAGCAGAGCCTGACGTTGTACAGGATCACTaGAGGGTCTTGCTCAGGTTAGAGAAGCCAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: PCTAEPDVVQDH*RVLLRLEKPIP Trigger: TGGTATTGGCTTCTCTAACCTGAGCAAGACCCTCAAGTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
||
| CDS-3UTR TCA 90 bp | GGATCACTTGAGGGTCTTGCTCAGGTTAGAGAAGCCAATACCAACGCAGGTCATAAAAATTGTGTAGGGTaGGAGTGGTCCCAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLEGLAQVREANTNAGHKNCVG*EWSQQD Trigger: GTCCTGCTGGGACCACTCTCACCCTACACAATTTTT...ATGACCTGCGTTGGTATTGGCTTCTCTAACCTGAGCAAGACCCTCAAGTGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
||
| CDS-3UTR CCA 90 bp | TACACAGAGCCACAATCCAAAGATGAAGAAGAGCTGCTGGGATACTGTCTAGCAACCGAAGGGTCAACCTaGTCATTGGTCACTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YTEPQSKDEEELLGYCLATEGST*SLVTPR Trigger: GCGAGGAGTGACCAATGACCAGGTTGACCCTTCGGT...TGCTAGACAGTATCCCAGCAGCTCTTCTTCATCTTTGGATTGTGGCTCTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCATTTTTCCTGGGTCTGTaGGCTGGACAGGCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLSRCHINPTQSHNPFFLGL*AGQASG Trigger: TCCTGAAGCCTGTCCAGCTCACAGACCCAGGAAAAA...TGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | CTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCAGGTCAACCTGGTCATTaGTCACTCCTCGCAGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHTLSRCHINPTQSHNPGQPGH*SLLAER Trigger: TCGTTCTGCGAGGAGTGACCAATGACCAGGTTGACC...TGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | TCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTATTTGCAAATCCGCTTGATTTTTCCTaGGTCTGTGAGCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLEKQLEVTWERQLVFANPLDFS*VCELDR Trigger: CCTGTCCAGCTCACAGACCCAGGAAAAATCAAGCGG...ATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | CAATCCAAAGATGAAGAAGAGCTGCTGGGATACTGTCTAGCAGCGTGGCCACTCAGCAGAACTAGACTTTaGTTGGTCGAGTCTACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSKDEEELLGYCLAAWPLSRTRL*LVESTH Trigger: ATGCGTAGACTCGACCAACCAAAGTCTAGTTCTGCT...GAGTGGCCACGCTGCTAGACAGTATCCCAGCAGCTCTTCTTCATCTTTGGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | GACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGGAACTAGACTTTGGTTaGTCGAGTCTACGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DWRSSTHTVTLSHKPYTEELDFG*SSLRIH Trigger: GTGGATGCGTAGACTCGACCAACCAAAGTCTAGTTC...CTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR GCA 90 bp | CGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGATCACAAAAAGCTCTTCAGATaGCGCAAAAATTGTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIFLLHPCTAEPDVVQDHKKLFR*RKNCVG Trigger: CCCTACACAATTTTTGCGGCATCTGAAGAGCTTTTT...GTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | GGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAAAGGTTGTTCCTGTTTaGTTGATTTCAATTCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGPCGPSHLSASSMHSRKVVPV*LISIRE Trigger: TTCTCGAATTGAAATCAACCAAACAGGAACAACCTT...TCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | CAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCCTGGGAACTAGACTTTGGTTaGTCGAGTCTACGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QYFQWKRKSVMLRGRLSWELDFG*SSLRIH Trigger: GTGGATGCGTAGACTCGACCAACCAAAGTCTAGTTC...CCAGGACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| 3UTR CAA 72 bp | ACAACAGACTGGAGGTCTTCTACACACACTGTCACGTaGTCACATAAACCCTACACAGAGCCACAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTDWRSSTHTVT*SHKPYTEPQSK Trigger: TTTGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CCA 90 bp | TCATTGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTATTTGCAAATAAGGTTGTTCCTGTTTaGTTGATTTCAATTCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEKQLEVTWERQLVFANKVVPV*LISIRE Trigger: TTCTCGAATTGAAATCAACCAAACAGGAACAACCTT...ATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR GCA 90 bp | TGCAAATCAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTAAAAAGCTCTTCAGATaGCGCAAAAATTCTATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKSVFSVEKKVCNVKRPPKKLFR*RKNSIV Trigger: CACGATAGAATTTTTGCGGCATCTGAAGAGCTTTTT...AGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTGATTTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000064393.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAATCAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTCAGTTCTTCACCACATaGCTTGGTTTCAACTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKSVFSVEKKVCNVKRPPQFFTT*LGFNFK Trigger: TTTAAAGTTGAAACCAAGCCATGTGGTGAAGAACTG...AGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTGATTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064393.6 |
||
| CDS TCA 90 bp | CTCGGAGGCCCGGGTTGTCGTCCCTGGCGCGAATCCTGCGGATCTTaGCCGGTCGCCCGCTCAGGGTGGACAGGACCAGCCGCTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGGPGCRPWRESCGS*PVARSGWTGPAAGA Trigger: TGCGCCAGCGGCTGGTCCTGTCCACCCTGAGCGGGCGACCGGTCAAGATCCGCAGGATTCGCGCCAGGGACGACAACCCGGGCCTCCGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCCCACAGCCTGGGCCTCCGAGGAATGTCATTGGAGAAGCAGCTGGAAGCGAATCCTGCGGATCTaGACCGGTCGCCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WKPTAWASEECHWRSSWKRILRI*TGRPLR Trigger: CCTGAGCGGGCGACCGGTCAAGATCCGCAGGATTCG...CTTCCAGCTGCTTCTCCAATGACATTCCTCGGAGGCCCAGGCTGTGGGCTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | CGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGATCACTCTCGGAGGCCCGGGTaGTCGTCCCTGGCGCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: RIFLLHPCTAEPDVVQDHSRRPG*SSLARI Trigger: GATTCGCGCCAGGGACGACAACCCGGGCCTCCGAGA...GTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCATACCTGGGATACAGAAAACATTTAAGACATGTCTGCCCTCCCCATCCCTCTCGGAGGCCCGGGTaGTCGTCCCTGGCGCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: MPYLGYRKHLRHVCPPHPSRRPG*SSLARI Trigger: GATTCGCGCCAGGGACGACAACCCGGGCCTCCGAGA...GGGATGGGGAGGGCAGACATGTCTTAAATGTTTTCTGTATCCCAGGTATGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | CAGACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGCCCTGGCCCTGGGGATaGGAGGCCAGTTCCGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: QTGGLLHTLSRCHINPTQPWPWG*EASSAL Trigger: GAGTGCGGAACTGGCCTCCAATCCCCAGGGCCAGGG...CTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | GACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCGAATCCTGCGGATCTaGACCGGTCGCCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DWRSSTHTVTLSHKPYTERILRI*TGRPLR Trigger: CCTGAGCGGGCGACCGGTCAAGATCCGCAGGATTCG...CTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | TACACAGAGCCACAATCCAAAGATGAAGAAGAGCTGCTGGGATACTGTCTAGCACCCTGGCCCTGGGGATaGGAGGCCAGTTCCGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: YTEPQSKDEEELLGYCLAPWPWG*EASSAL Trigger: GAGTGCGGAACTGGCCTCCAATCCCCAGGGCCAGGG...TGCTAGACAGTATCCCAGCAGCTCTTCTTCATCTTTGGATTGTGGCTCTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS TCA 90 bp | GTGGTCCCAGCAGGACTTTGGAAACGTCCTGCTGTCCAAGGGTCATaGGCAGCAGAACTAGACTTTGGTTGGTCGAGTCTACGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVPAGLWKRPAVQGS*AAELDFGWSSLRIH Trigger: GTGGATGCGTAGACTCGACCAACCAAAGTCTAGTTCTGCTGCTCATGACCCTTGGACAGCAGGACGTTTCCAAAGTCCTGCTGGGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | CGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGATCACGGGTCAACCTGGTCATaGGTCACTCCTCGCAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: RIFLLHPCTAEPDVVQDHGSTWS*VTPRRT Trigger: CGTTCTGCGAGGAGTGACCAATGACCAGGTTGACCC...GTGATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
||
| CDS TCA 90 bp | TTGTTGAGGATGCTCCTTGCGGAATCCACGATCCGGTTTGCCATCTaGGGTGATACACGAACTGAGTACGCCATTCCTCTGATCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRMLLAESTIRFAI*GDTRTEYAIPLIRL Trigger: CAAGCGGATCAGAGGAATGGCGTACTCAGTTCGTGTATCACCTCAGATGGCAAACCGGATCGTGGATTCCGCAAGGAGCATCCTCAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCATCCCAACCACCAGGCCCACACAAACACAAGTTACCATGTGAGGTAATTCCTCTGATCCGCTaGATTTTTCCTGGGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPSQPPGPHKHKLPCEVIPLIR*IFPGSV Trigger: CACAGACCCAGGAAAAATCAAGCGGATCAGAGGAAT...TACCTCACATGGTAACTTGTGTTTGTGTGGGCCTGGTGGTTGGGATGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
||
| CDS-3UTR CAA 90 bp | GGATGGACATGCCTGGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATAATCCACGATCCGGTTaGCCATCTGAGGTGATACAC | + |
|
Preference number: 5 (lower is better) Translates to: GWTCLDLVPVVLRIFLLHNPRSG*PSEVIH Trigger: GTGTATCACCTCAGATGGCAAACCGGATCGTGGATT...ATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAGGCATGTCCATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | ATGCCATACCTGGGATACAGAAAACATTTAAGACATGTCTGCCCTCCCCATCCCGGTCCCAGCAGGACTTaGGAAACGTCCTGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: MPYLGYRKHLRHVCPPHPGPSRT*ETSCCP Trigger: TGGACAGCAGGACGTTTCCAAAGTCCTGCTGGGACC...GGGATGGGGAGGGCAGACATGTCTTAAATGTTTTCTGTATCCCAGGTATGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTATTTGCAAATCAGTGGTCCCAGCAGGACTTaGGAAACGTCCTGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: WRSSWKSRGRDSLYLQISGPSRT*ETSCCP Trigger: TGGACAGCAGGACGTTTCCAAAGTCCTGCTGGGACC...ACTGATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | GGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAATTCCTCTGATCCGCTaGATTTTTCCTGGGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GLGPCGPSHLSASSMHSRIPLIR*IFPGSV Trigger: CACAGACCCAGGAAAAATCAAGCGGATCAGAGGAAT...TCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCATCAGGTATGAACTTGTaGAGGATGCTCCTTGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: LDLVPVVLRIFLLHPCTASGMNL*RMLLAE Trigger: TTCCGCAAGGAGCATCCTCAACAAGTTCATACCTGA...TGCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CTTCGCATCTTTCTGCTTCATCCATGCACAGCAGAGCCTGACGTTGTACAGGATTCAGGTATGAACTTGTaGAGGATGCTCCTTGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: LRIFLLHPCTAEPDVVQDSGMNL*RMLLAE Trigger: TTCCGCAAGGAGCATCCTCAACAAGTTCATACCTGA...ATCCTGTACAACGTCAGGCTCTGCTGTGCATGGATGAAGCAGAAAGATGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | GCCATACCTGGGATACAGAAAACATTTAAGACATGTCTGCCCTCCCCATCCCAAAGAACTAGACTTTGGTaGGTCGAGTCTACGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: AIPGIQKTFKTCLPSPSQRTRLW*VESTHP Trigger: TGGATGCGTAGACTCGACCAACCAAAGTCTAGTTCT...TTGGGATGGGGAGGGCAGACATGTCTTAAATGTTTTCTGTATCCCAGGTATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CCTGGACTTGGTCCCTGTGGTCCTTCGCATCTTTCTGCTTCATCCATGCACAGCTCTTCACCACATGGCTaGGTTTCAACTTTAAACATA | + |
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Preference number: 5 (lower is better) Translates to: PGLGPCGPSHLSASSMHSSSPHG*VSTLNI Trigger: TATGTTTAAAGTTGAAACCAAGCCATGTGGTGAAGA...GCTGTGCATGGATGAAGCAGAAAGATGCGAAGGACCACAGGGACCAAGTCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064393.6 |
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| CDS-3UTR CAA 90 bp | AAATCAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCGGGTCAACCTGGTCATaGGTCACTCCTCGCAGAACG | + |
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Preference number: 5 (lower is better) Translates to: KSVFSVEKKVCNVKRPPVGSTWS*VTPRRT Trigger: CGTTCTGCGAGGAGTGACCAATGACCAGGTTGACCC...GACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCCTGGAATCCACGATCCGGTTaGCCATCTGAGGTGATACAC | + |
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Preference number: 5 (lower is better) Translates to: QYFQWKRKSVMLRGRLSWNPRSG*PSEVIH Trigger: GTGTATCACCTCAGATGGCAAACCGGATCGTGGATT...CCAGGACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CAACAGACTGGAGGTCTTCTACACACACTGTCACGTTGTCACATAAACCCTACAATGTCAGGTATGAACTaGTTGAGGATGCTCCTTGCG | + |
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Preference number: 5 (lower is better) Translates to: QQTGGLLHTLSRCHINPTMSGMN*LRMLLA Trigger: CGCAAGGAGCATCCTCAACAAGTTCATACCTGACAT...TGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAGAAGACCTCCAGTCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CTACACACACTGTCACGTTGTCACATAAACCCTACACAGAGCCACAATCCAAAGAGAACTAGACTTTGGTaGGTCGAGTCTACGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: LHTLSRCHINPTQSHNPKRTRLW*VESTHP Trigger: TGGATGCGTAGACTCGACCAACCAAAGTCTAGTTCT...CTTTGGATTGTGGCTCTGTGTAGGGTTTATGTGACAACGTGACAGTGTGTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | CAGTATTTTCAGTGGAAAAGAAAGTCTGTAATGTTAAGAGGCCGCCTGTCCTGGATGTCAGGTATGAACTaGTTGAGGATGCTCCTTGCG | + |
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Preference number: 5 (lower is better) Translates to: QYFQWKRKSVMLRGRLSWMSGMN*LRMLLA Trigger: CGCAAGGAGCATCCTCAACAAGTTCATACCTGACAT...CCAGGACAGGCGGCCTCTTAACATTACAGACTTTCTTTTCCACTGAAAATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGCAGCTGGAAGTCACGTGGGAGAGACAGCTTGTATTTGCAAATCAGTGTTGTTCCTGTTTGGTaGATTTCAATTCGAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: WRSSWKSRGRDSLYLQISVVPVW*ISIREP Trigger: TGGTTCTCGAATTGAAATCAACCAAACAGGAACAAC...ACTGATTTGCAAATACAAGCTGTCTCTCCCACGTGACTTCCAGCTGCTTCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CAA 90 bp | TCTCGGAGGCCCGGGTTGTCGTCCCTGGCGCGAATCCTGCGGATCTaGACCGGTCGCCCGCTCAGGGTGGACAGGACCAGCCGCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SRRPGLSSLARILRI*TGRPLRVDRTSRWR Trigger: GCGCCAGCGGCTGGTCCTGTCCACCCTGAGCGGGCGACCGGTCAAGATCCGCAGGATTCGCGCCAGGGACGACAACCCGGGCCTCCGAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS TCA 72 bp | CCGGGTTGTCGTCCCTGGCGCGAATCCTGCGGATCTTaGCCGGTCGCCCGCTCAGGGTGGACAGGACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGCRPWRESCGS*PVARSGWTGPA Trigger: GGCTGGTCCTGTCCACCCTGAGCGGGCGACCGGTCAAGATCCGCAGGATTCGCGCCAGGGACGACAACCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CAA 72 bp | CCCGGGTTGTCGTCCCTGGCGCGAATCCTGCGGATCTaGACCGGTCGCCCGCTCAGGGTGGACAGGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: PGLSSLARILRI*TGRPLRVDRTS Trigger: GCTGGTCCTGTCCACCCTGAGCGGGCGACCGGTCAAGATCCGCAGGATTCGCGCCAGGGACGACAACCCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS GCA 72 bp | CTTTGCACAGTTCCTGCCGAGGTCCTCGGGAAGCACTaGTGCTCCCTGGCCCTGGGGATTGGAGGCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCTVPAEVLGKH*CSLALGIGGQF Trigger: GAACTGGCCTCCAATCCCCAGGGCCAGGGAGCAGCAGTGCTTCCCGAGGACCTCGGCAGGAACTGTGCAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS GCA 72 bp | GAGCCAGGCAAAGCAGAGCTTCCAGGTAATAGCCAATaGCACGGAGGACACTGCAGTCGTGCTCCACAGACC | + |
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Preference number: 6 (lower is better) Translates to: EPGKAELPGNSQ*HGGHCSRAPQT Trigger: GGTCTGTGGAGCACGACTGCAGTGTCCTCCGTGGCATTGGCTATTACCTGGAAGCTCTGCTTTGCCTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS GCA 72 bp | CAGTTCCGCACTCAGGAAGGTACCGTTGGTAGTCTCTaGAACCAGCGACAGCCCAAAGCCTGGAGACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QFRTQEGTVGSL*NQRQPKAWRLP Trigger: GGGAAGTCTCCAGGCTTTGGGCTGTCGCTGGTTGCAGAGACTACCAACGGTACCTTCCTGAGTGCGGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CAA 72 bp | CTTATAAAGCTTGCTTCAAAATCTCGGAGGCCCGGGTaGTCGTCCCTGGCGCGAATCCTGCGGATCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: LIKLASKSRRPG*SSLARILRILT Trigger: GGTCAAGATCCGCAGGATTCGCGCCAGGGACGACAACCCGGGCCTCCGAGATTTTGAAGCAAGCTTTATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS GCA 72 bp | GGTGAGAGTGGTCCCAGCAGGACTTTGGAAACGTCCTaGTGTCCAAGGGTCATGAGCAGCAGAACTAGACTT | + |
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Preference number: 6 (lower is better) Translates to: GESGPSRTLETS*CPRVMSSRTRL Trigger: AAGTCTAGTTCTGCTGCTCATGACCCTTGGACAGCAGGACGTTTCCAAAGTCCTGCTGGGACCACTCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS TCA 72 bp | ATGCTCCTTGCGGAATCCACGATCCGGTTTGCCATCTaGGGTGATACACGAACTGAGTACGCCATTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: MLLAESTIRFAI*GDTRTEYAIPL Trigger: CAGAGGAATGGCGTACTCAGTTCGTGTATCACCTCAGATGGCAAACCGGATCGTGGATTCCGCAAGGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CAA 90 bp | AGCGCTGTCGCTTTAAGAACATCAACCGAAGGGTCAACCTGGTCATaGGTCACTCCTCGCAGAACGATTTTTAATGGGTGTTTCATAAAC | + |
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Preference number: 6 (lower is better) Translates to: SAVALRTSTEGSTWS*VTPRRTIFNGCFIN Trigger: GTTTATGAAACACCCATTAAAAATCGTTCTGCGAGGAGTGACCAATGACCAGGTTGACCCTTCGGTTGATGTTCTTAAAGCGACAGCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CCA 72 bp | GCTGTCGCTTTAAGAACATCAACCGAAGGGTCAACCTaGTCATTGGTCACTCCTCGCAGAACGATTTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: AVALRTSTEGST*SLVTPRRTIFN Trigger: ATTAAAAATCGTTCTGCGAGGAGTGACCAATGACCAGGTTGACCCTTCGGTTGATGTTCTTAAAGCGACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CAA 72 bp | GCTTTAAGAACATCAACCGAAGGGTCAACCTGGTCATaGGTCACTCCTCGCAGAACGATTTTTAATGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ALRTSTEGSTWS*VTPRRTIFNGC Trigger: ACACCCATTAAAAATCGTTCTGCGAGGAGTGACCAATGACCAGGTTGACCCTTCGGTTGATGTTCTTAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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| CDS CAA 72 bp | GTTGTTCCTGTTTGGTTGATTTCAATTCGAGAACCATaGGTTATTTTATCCAATAGCCTTATAAAGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VVPVWLISIREP*VILSNSLIKLA Trigger: AGCAAGCTTTATAAGGCTATTGGATAAAATAACCAATGGTTCTCGAATTGAAATCAACCAAACAGGAACAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064393.6 ENSMUST00000235900.2 |
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