Pregenerated sensors for RCE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024889Ensembl transcript IDs: ENSMUST00000025823.6, ENSMUST00000224675.3, ENSMUST00000224707.2, ENSMUST00000225264.2, ENSMUST00000225375.2, ENSMUST00000225476.2, ENSMUST00000237022.2, ENSMUST00000237059.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTTGAAGCAGAAGCAGGAAAAGTCCCACACCGAGGGCATAGCCTaGCAGCAGTGGCCACTTCTGTGGATGCTCCAGGGCTGCACACAC | + |
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Preference number: 1 (lower is better) Translates to: GLKQKQEKSHTEGIA*QQWPLLWMLQGCTH Trigger: GTGTGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGTGTGGGACTTTTCCTGCTTCTGCTTCAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR CCA 90 bp | AAGTCCCACACCGAGGGCATAGCCTGCCAGCAGTGGCCACTTCTGTaGATGCTCCAGGGCTGCACACACTGCAGGGAAGCCCATGTAGTT | + |
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Preference number: 1 (lower is better) Translates to: KSHTEGIACQQWPLL*MLQGCTHCREAHVV Trigger: AACTACATGGGCTTCCCTGCAGTGTGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGTGTGGGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGACAGCTCCTAGGATTTaGCCTTGTCCCCTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: GTPASPSLAVFLGKEELETAPRI*PCPLTS Trigger: GGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGT...CTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGAGCCATAGCCTGCCAGCAGTaGCCACTTCTGTGGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: PQPVPPLQYSLVRRSWRAIACQQ*PLLWML Trigger: GAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTAT...GGCTCTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGGGGTCTGTCAGGGGTTaGAGCAGAAGCAGGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: GTPASPSLAVFLGKEELEGSVRG*SRSRKS Trigger: ACTTTTCCTGCTTCTGCTTCAACCCCTGACAGACCC...CTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGCTTTCTCTTGGTCCCTaGGATTCAACTAGCTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GTPASPSLAVFLGKEELELSLGP*DSTSSG Trigger: GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAG...CTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTCCCTTCGAGAGGGGCTaGACCCTTTGGATATCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GAAPFGYLLLSLGPWDSTPFERG*TLWISA Trigger: AGCAGATATCCAAAGGGTGCAGCCCCTCTCGAAGGG...AGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTTCTTTCTCTTGGTCCCTaGGATTCAACTAGCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GSVSPQLLGFALVPSPPVLSLGP*DSTSSG Trigger: GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAG...AACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTCTTTCTCTTGGTCCCTaGGATTCAACTAGCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RKRQSTAPRICPCPLTSSLSLGP*DSTSSG Trigger: GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAG...ACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGGCTGCCATAGAGCTTGGGGTCTGTCAGGGGTTGAAGCAGAAGCAGGAAGGTGTCCTGTGCGGATaGAGAGGAAAGCTGTATAAG | + |
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Preference number: 2 (lower is better) Translates to: RKAAIELGVCQGLKQKQEGVLCG*RGKLYK Trigger: CTTATACAGCTTTCCTCTTCATCCGCACAGGACACC...TTCCTGCTTCTGCTTCAACCCCTGACAGACCCCAAGCTCTATGGCAGCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTCCCTTCGAGAGGGGCTaGACCCTTTGGATATCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLDICSFLLVPGIQLALAPFERG*TLWISA Trigger: AGCAGATATCCAAAGGGTGCAGCCCCTCTCGAAGGG...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCACAGCTCCTAGGATTTaGCCTTGTCCCCTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: YLLLSLGPWDSTSSGFNPTAPRI*PCPLTS Trigger: GGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGT...GGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAACCCTTCGAGAGGGGCTaGACCCTTTGGATATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SFLLVPGIQLALASIPYKPFERG*TLWISA Trigger: AGCAGATATCCAAAGGGTGCAGCCCCTCTCGAAGGG...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAACAGGGCTGCACACACTaGAGGGAAGCCCATGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLVPGIQLALASIPYKQGCTH*REAHVV Trigger: AACTACATGGGCTTCCCTGCAGTGTGTGCAGCCCTG...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAGGAAGCCCATGTAGTTaGAGAAAGAGTGGCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SFLLVPGIQLALASIPYKGSPCS*RKSGRE Trigger: TTCTCTGCCACTCTTTCTGCAACTACATGGGCTTCC...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR CCA 72 bp | ACCGAGGGCATAGCCTGCCAGCAGTGGCCACTTCTGTaGATGCTCCAGGGCTGCACACACTGCAGGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: TEGIACQQWPLL*MLQGCTHCREA Trigger: GGCTTCCCTGCAGTGTGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR GCA 72 bp | CAGAAGCAGGAAAAGTCCCACACCGAGGGCATAGCCTaGCAGCAGTGGCCACTTCTGTGGATGCTCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QKQEKSHTEGIA*QQWPLLWMLQG Trigger: GCCCTGGAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGTGTGGGACTTTTCCTGCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR GCA 72 bp | GAGCCAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTaGCCTTGTCCCCTCACCTCCAGTTGCTGCTCATCC | + |
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Preference number: 3 (lower is better) Translates to: EPRKRQSTAPRI*PCPLTSSCCSS Trigger: GGATGAGCAGCAACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTGAGGGGCTGCACCCTTaGGATATCTGCTCCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SQGSVSPQLLGFALVPSPEGLHP*DICSFL Trigger: GAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTC...AGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR GCA 72 bp | TGGCCACTTCTGTGGATGCTCCAGGGCTGCACACACTaGAGGGAAGCCCATGTAGTTGCAGAAAGAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WPLLWMLQGCTH*REAHVVAERVA Trigger: TGCCACTCTTTCTGCAACTACATGGGCTTCCCTGCAGTGTGTGCAGCCCTGGAGCATCCACAGAAGTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR CAA 90 bp | GGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGATCTGCTCCTTTCTCTaGGTCCCTGGGATTCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: GTPASPSLAVFLGKEELEICSFL*VPGIQL Trigger: TAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGAT...CTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATCTGCTCCTTTCTCTaGGTCCCTGGGATTCAACTA | + |
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Preference number: 3 (lower is better) Translates to: LREGLHPLDICSFLLVPGICSFL*VPGIQL Trigger: TAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGAT...CCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTATCTGCTCCTTTCTCTaGGTCCCTGGGATTCAACTA | + |
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Preference number: 3 (lower is better) Translates to: GAAPFGYLLLSLGPWDSTICSFL*VPGIQL Trigger: TAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGAT...AGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR CCA 72 bp | GCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTaGGATTCAACTAGCTCTGGCTTCAATCCCCTACAA | + |
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Preference number: 3 (lower is better) Translates to: APFGYLLLSLGP*DSTSSGFNPLQ Trigger: TTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR CCA 72 bp | CCAAAAGCATACAAAGAGGAAGGCTGCCATAGAGCTTaGGGTCTGTCAGGGGTTGAAGCAGAAGCAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: PKAYKEEGCHRA*GLSGVEAEAGK Trigger: TTTTCCTGCTTCTGCTTCAACCCCTGACAGACCCCAAGCTCTATGGCAGCCTTCCTCTTTGTATGCTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTATCTGCTCCTTTCTCTaGGTCCCTGGGATTCAACTA | + |
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Preference number: 3 (lower is better) Translates to: PLDICSFLLVPGIQLALAICSFL*VPGIQL Trigger: TAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGAT...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| 3UTR-3UTR CAA 90 bp | TATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCTCCCAATACAAAGTCTaGATGCAAAAAGACAATGAG | + |
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Preference number: 3 (lower is better) Translates to: YLLLSLGPWDSTSSGFNPSQYKV*MQKDNE Trigger: CTCATTGTCTTTTTGCATCAAGACTTTGTATTGGGA...GGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | CTTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGGCCGCTCAGCGCGGCTaGCTCGGGCTGCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LREGLHPLDICSFLLVPGAAQRG*LGLPLW Trigger: CCAGAGCGGCAGCCCGAGTCAGCCGCGCTGAGCGGC...CCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
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| CDS-3UTR TCA 90 bp | CAGCGGTGTAGGAGAACTGGAACGCTGCAGACACGAAGATACTTCCCACACTGCGCCGCTCAGCGCGGCTaGCTCGGGCTGCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QRCRRTGTLQTRRYFPHCAAQRG*LGLPLW Trigger: CCAGAGCGGCAGCCCGAGTCAGCCGCGCTGAGCGGC...GCAGTGTGGGAAGTATCTTCGTGTCTGCAGCGTTCCAGTTCTCCTACACCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGAGCCCTGGCTGGATGCCAGTaGGTTCCCTCCAGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PQPVPPLQYSLVRRSWRALAGCQ*VPSRAA Trigger: TGCTGCTCTGGAGGGAACTCACTGGCATCCAGCCAG...GGCTCTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
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| CDS-3UTR GCA 90 bp | TCGGGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGTGGATGCTCCAGGGCTaGACACACTGCAGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGTPASPSLAVFLGKEELWMLQG*THCREA Trigger: GGCTTCCCTGCAGTGTGTGCAGCCCTGGAGCATCCA...CAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | GGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGACCGAGGGCATAGCCTaGCAGCAGTGGCCACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GTPASPSLAVFLGKEELETEGIA*QQWPLL Trigger: CAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGT...CTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | TCGGGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGTTGATAACAGCGGGGTaGTCCCTGGGCAGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGTPASPSLAVFLGKEELLITAG*SLGSSL Trigger: GAGCGAGCTGCCCAGGGACCACCCCGCTGTTATCAA...CAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
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| 3UTR CAA 72 bp | CGGGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTaGGTAAGGAGGAGCTGGAGAGCCCGTCAGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RGPQPVPPLQYS*VRRSWRARQSS Trigger: TGAACTCTGACGGGCTCTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | CCAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCTCCACACGTAGAGGCTaGCCACGTAGGAGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PRKRQSTAPRICPCPLTSSTRRG*PRRSRR Trigger: TCGCCTGCTCCTACGTGGGCAGCCTCTACGTGTGGA...GGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTCAGGGGCAGCAGCGCTaGTGGGAAAATGCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKRQSTAPRICPCPLTSSQGQQR*WENALQ Trigger: CTGGAGGGCATTTTCCCAGCAGCGCTGCTGCCCCTG...ACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCCTTCCCACACTGCTCTaGCGGAAGCGCAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PRKRQSTAPRICPCPLTSLPTLL*RKRSCS Trigger: TGAGCAGCTGCGCTTCCGCCAGAGCAGTGTGGGAAG...GGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | TCGGGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGCAGTGGCCACTTCTGTaGATGCTCCAGGGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: SGTPASPSLAVFLGKEELQWPLL*MLQGCT Trigger: TGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTG...CAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTGCCAGCGCATGTCTGTaGGGCAGCGGGCCCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GAAPFGYLLLSLGPWDSTASACL*GSGPKN Trigger: GTTCTTGGGCCCGCTGCCTCACAGACATGCGCTGGC...AGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | GCCTGCCAGCAGTGGCCACTTCTGTGGATGCTCCAGGGCTGCACACACTGCAGGGCTTTTCCTCAGTCTTaGAGACTCACCCAGGACAAC | + |
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Preference number: 4 (lower is better) Translates to: ACQQWPLLWMLQGCTHCRAFPQS*RLTQDN Trigger: GTTGTCCTGGGTGAGTCTTCAAGACTGAGGAAAAGC...CCTGCAGTGTGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTGCTGGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTTGGATGCTCCAGGGCTaGACACACTGCAGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RKRQSTAPRICPCPLTSSWMLQG*THCREA Trigger: GGCTTCCCTGCAGTGTGTGCAGCCCTGGAGCATCCA...ACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | AGCCAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCTTCCCACACTGCTCTaGCGGAAGCGCAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQGSVSPQLLGFALVPSPLPTLL*RKRSCS Trigger: TGAGCAGCTGCGCTTCCGCCAGAGCAGTGTGGGAAG...AGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | TCGGGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGGCTGCCATAGAGCTTaGGGTCTGTCAGGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGTPASPSLAVFLGKEELGCHRA*GLSGVE Trigger: TTCAACCCCTGACAGACCCCAAGCTCTATGGCAGCC...CAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR TCA 90 bp | CCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCGCCAGCGCATGTCTGTaGGGCAGCGGGCCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFGYLLLSLGPWDSTSSGASACL*GSGPKN Trigger: GTTCTTGGGCCCGCTGCCTCACAGACATGCGCTGGC...GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCAGGGAAGCCCATGTAGTTGCAGAAAGAGTGGCAGAGAACCGGCCCTATTCCACACGTAGAGGCTaGCCACGTAGGAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HCREAHVVAERVAENRPYSTRRG*PRRSRR Trigger: TCGCCTGCTCCTACGTGGGCAGCCTCTACGTGTGGA...ATAGGGCCGGTTCTCTGCCACTCTTTCTGCAACTACATGGGCTTCCCTGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| CDS-3UTR GCA 90 bp | GGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTTCTAGCATGGGCAGCATaGAAGCCCGGAACACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSPQLLGFALVPSPPVLAWAA*KPGTPA Trigger: AGCTGGTGTTCCGGGCTTGCATGCTGCCCATGCTAG...AACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | TTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGAACCGAGGGCATAGCCTaGCAGCAGTGGCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FERGCTLWISAPFSWSLGTEGIA*QQWPLL Trigger: CAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGT...TCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTCAGTGGCCACTTCTGTaGATGCTCCAGGGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKRQSTAPRICPCPLTSSQWPLL*MLQGCT Trigger: TGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTG...ACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTGCCAGCGCATGTCTGTaGGGCAGCGGGCCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLDICSFLLVPGIQLALAASACL*GSGPKN Trigger: GTTCTTGGGCCCGCTGCCTCACAGACATGCGCTGGC...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCCAGGGGCAGCAGCGCTaGTGGGAAAATGCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFGYLLLSLGPWDSTSSGQGQQR*WENALQ Trigger: CTGGAGGGCATTTTCCCAGCAGCGCTGCTGCCCCTG...GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | TTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGACTAGCATGGGCAGCATaGAAGCCCGGAACACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FERGCTLWISAPFSWSLGLAWAA*KPGTPA Trigger: AGCTGGTGTTCCGGGCTTGCATGCTGCCCATGCTAG...TCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTCAGGGCTGCACACACTaGAGGGAAGCCCATGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRQSTAPRICPCPLTSSQGCTH*REAHVV Trigger: AACTACATGGGCTTCCCTGCAGTGTGTGCAGCCCTG...ACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCACAGGGCTGCACACACTaGAGGGAAGCCCATGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSVSPQLLGFALVPSPPQGCTH*REAHVV Trigger: AACTACATGGGCTTCCCTGCAGTGTGTGCAGCCCTG...TGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTTCAGGGCTGCACACACTaGAGGGAAGCCCATGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSPQLLGFALVPSPPVQGCTH*REAHVV Trigger: AACTACATGGGCTTCCCTGCAGTGTGTGCAGCCCTG...AACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATAGCCTGCCAGCAGTaGCCACTTCTGTGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LREGLHPLDICSFLLVPGIACQQ*PLLWML Trigger: GAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTAT...CCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGGCTGCCATAGAGCTTaGGGTCTGTCAGGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGSVSPQLLGFALVPSPPGCHRA*GLSGVE Trigger: TTCAACCCCTGACAGACCCCAAGCTCTATGGCAGCC...TGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | GGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGGAGCAGGCGAGGCTaGAGCAGGAGAACACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GAAPFGYLLLSLGPWDSTRSRRG*SRRTQT Trigger: TGTCTGTGTTCTCCTGCTTCAGCCTCGCCTGCTCCT...AGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTGGGTCTGTCAGGGGTTaGAGCAGAAGCAGGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRQSTAPRICPCPLTSSGSVRG*SRSRKS Trigger: ACTTTTCCTGCTTCTGCTTCAACCCCTGACAGACCC...ACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTCCAGTTGGGTCTGTCAGGGGTTaGAGCAGAAGCAGGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSPQLLGFALVPSPPVGSVRG*SRSRKS Trigger: ACTTTTCCTGCTTCTGCTTCAACCCCTGACAGACCC...AACTGGAGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | GGGACCCCAGCCAGTCCCTCCCTTGCAGTATTCCTTGGTAAGGAGGAGCTGGAGCAATCCATAGAGAGCTaGATCAGTGGACCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTPASPSLAVFLGKEELEQSIES*ISGPRK Trigger: TTTCCTGGGTCCACTGATGCAGCTCTCTATGGATTG...CTCCAGCTCCTCCTTACCAAGGAATACTGCAAGGGAGGGACTGGCTGGGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | CCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTGGATGCTCCAGGGCTaGACACACTGCAGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFGYLLLSLGPWDSTSSGWMLQG*THCREA Trigger: GGCTTCCCTGCAGTGTGTGCAGCCCTGGAGCATCCA...GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGAATAGCCTGCCAGCAGTaGCCACTTCTGTGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FERGCTLWISAPFSWSLGIACQQ*PLLWML Trigger: GAGCATCCACAGAAGTGGCCACTGCTGGCAGGCTAT...TCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCGCCAGCGCATGTCTGTaGGGCAGCGGGCCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPWDSTSSGFNPLQKFASACL*GSGPKN Trigger: GTTCTTGGGCCCGCTGCCTCACAGACATGCGCTGGC...GAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAACAGGGGCAGCAGCGCTaGTGGGAAAATGCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLLVPGIQLALASIPYKQGQQR*WENALQ Trigger: CTGGAGGGCATTTTCCCAGCAGCGCTGCTGCCCCTG...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTACCGAGGGCATAGCCTaGCAGCAGTGGCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLDICSFLLVPGIQLALATEGIA*QQWPLL Trigger: CAGAAGTGGCCACTGCTGGCAGGCTATGCCCTCGGT...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTGGCTGCCATAGAGCTTaGGGTCTGTCAGGGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAAPFGYLLLSLGPWDSTGCHRA*GLSGVE Trigger: TTCAACCCCTGACAGACCCCAAGCTCTATGGCAGCC...AGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTCTAGCATGGGCAGCATaGAAGCCCGGAACACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLDICSFLLVPGIQLALALAWAA*KPGTPA Trigger: AGCTGGTGTTCCGGGCTTGCATGCTGCCCATGCTAG...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCCTGAGATTGATAACAGCGGGGTaGTCCCTGGGCAGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPWDSTSSGFNPLQKFLRLITAG*SLGSSL Trigger: GAGCGAGCTGCCCAGGGACCACCCCGCTGTTATCAA...TCTCAGGAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
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| CDS-3UTR CCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAACTTCCCACACTGCTCTaGCGGAAGCGCAGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLVPGIQLALASIPYKLPTLL*RKRSCS Trigger: TGAGCAGCTGCGCTTCCGCCAGAGCAGTGTGGGAAG...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| 3UTR CAA 72 bp | GAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTaGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: EGLHPLDICSFL*VPGIQLALASI Trigger: GATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | TTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGAAGAGAGCTGCATCAGTaGACCCAGGAAAAGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FERGCTLWISAPFSWSLGRELHQ*TQEKDH Trigger: ATGATCCTTTTCCTGGGTCCACTGATGCAGCTCTCT...TCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCCTGCAGTGGCCACTTCTGTaGATGCTCCAGGGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGPWDSTSSGFNPLQKFLQWPLL*MLQGCT Trigger: TGTGCAGCCCTGGAGCATCCACAGAAGTGGCCACTG...CAGGAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCAGGAGCAGGCGAGGCTaGAGCAGGAGAACACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLGPWDSTSSGFNPLQKFRSRRG*SRRTQT Trigger: TGTCTGTGTTCTCCTGCTTCAGCCTCGCCTGCTCCT...GAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000225476.2 |
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| CDS-3UTR TCA 90 bp | AGCCAAGGAAGCGTCAGTCCACAGCTCCTAGGATTTGCCCTTGTCCCCTCACCTTGCTCAATAATGTGGTaGAAATGGGCGACTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQGSVSPQLLGFALVPSPCSIMW*KWATPK Trigger: TTTTGGAGTCGCCCATTTTCACCACATTATTGAGCA...AGGTGAGGGGACAAGGGCAAATCCTAGGAGCTGTGGACTGACGCTTCCTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | CCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCGGTGTCCTGTGCGGATaGAGAGGAAAGCTGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFGYLLLSLGPWDSTSSGGVLCG*RGKLYK Trigger: CTTATACAGCTTTCCTCTTCATCCGCACAGGACACC...GCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTCAATCCATAGAGAGCTaGATCAGTGGACCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAAPFGYLLLSLGPWDSTQSIES*ISGPRK Trigger: TTTCCTGGGTCCACTGATGCAGCTCTCTATGGATTG...AGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR TCA 90 bp | TTCGAGAGGGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATGCTCAATAATGTGGTaGAAATGGGCGACTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FERGCTLWISAPFSWSLGCSIMW*KWATPK Trigger: TTTTGGAGTCGCCCATTTTCACCACATTATTGAGCA...TCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCCCTCTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAGGGTCTGTCAGGGGTTaGAGCAGAAGCAGGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLVPGIQLALASIPYKGSVRG*SRSRKS Trigger: ACTTTTCCTGCTTCTGCTTCAACCCCTGACAGACCC...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCACCCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGGAAGCCCATGTAGTTaGAGAAAGAGTGGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLHPLDICSFLLVPGIQLGSPCS*RKSGRE Trigger: TTCTCTGCCACTCTTTCTGCAACTACATGGGCTTCC...TAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGGGTGCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAGGTGTCCTGTGCGGATaGAGAGGAAAGCTGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLLVPGIQLALASIPYKGVLCG*RGKLYK Trigger: CTTATACAGCTTTCCTCTTCATCCGCACAGGACACC...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCCTGAGAGGAGAACTGGAACGCTaGAGACACGAAGATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPWDSTSSGFNPLQKFLRGELER*RHEDTS Trigger: GGAAGTATCTTCGTGTCTGCAGCGTTCCAGTTCTCC...TCTCAGGAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAGGAGAACTGGAACGCTaGAGACACGAAGATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLVPGIQLALASIPYKGELER*RHEDTS Trigger: GGAAGTATCTTCGTGTCTGCAGCGTTCCAGTTCTCC...TTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTAGAGAGCTGCATCAGTaGACCCAGGAAAAGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLDICSFLLVPGIQLALARELHQ*TQEKDH Trigger: ATGATCCTTTTCCTGGGTCCACTGATGCAGCTCTCT...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
||
| CDS-3UTR CCA 90 bp | TATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCAGAGAGCTGCATCAGTaGACCCAGGAAAAGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLLLSLGPWDSTSSGFNPRELHQ*TQEKDH Trigger: ATGATCCTTTTCCTGGGTCCACTGATGCAGCTCTCT...GGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCCTGAGACAATCCATAGAGAGCTaGATCAGTGGACCCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GPWDSTSSGFNPLQKFLRQSIES*ISGPRK Trigger: TTTCCTGGGTCCACTGATGCAGCTCTCTATGGATTG...TCTCAGGAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000225476.2 ENSMUST00000237059.2 |
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| CDS-3UTR TCA 90 bp | CCTTTGGATATCTGCTCCTTTCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTGCTCAATAATGTGGTaGAAATGGGCGACTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PLDICSFLLVPGIQLALACSIMW*KWATPK Trigger: TTTTGGAGTCGCCCATTTTCACCACATTATTGAGCA...AGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGAAAGGAGCAGATATCCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS-3UTR GCA 90 bp | TCTCTTGGTCCCTGGGATTCAACTAGCTCTGGCTTCAATCCCCTACAAAAATTCGGAAGCCCATGTAGTTaGAGAAAGAGTGGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLGPWDSTSSGFNPLQKFGSPCS*RKSGRE Trigger: TTCTCTGCCACTCTTTCTGCAACTACATGGGCTTCC...GAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGAATCCCAGGGACCAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000224707.2 ENSMUST00000237059.2 |
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| CDS GCA 90 bp | CAGCACAGCCCCGAGCCCGGGCCGCTCAGCGCGGCTGACTCGGGCTaGCGCTCTGGCCGCGATACCGACAGTAAACGCAGCCCGTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: QHSPEPGPLSAADSG*RSGRDTDSKRSPSP Trigger: CGGGGACGGGCTGCGTTTACTGTCGGTATCGCGGCCAGAGCGGCAGCCCGAGTCAGCCGCGCTGAGCGGCCCGGGCTCGGGGCTGTGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000225375.2 ENSMUST00000225476.2 |
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| CDS TCA 90 bp | CGCTCTTCCACACGTAGAGGCTGCCCACGTAGGAGCAGGCGAGGCTaGAGCAGGAGAACACAGACACCCAGCAGCACAGCCCCGAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: RSSTRRGCPRRSRRG*SRRTQTPSSTAPSP Trigger: CGGGCTCGGGGCTGTGCTGCTGGGTGTCTGTGTTCTCCTGCTTCAGCCTCGCCTGCTCCTACGTGGGCAGCCTCTACGTGTGGAAGAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000225375.2 ENSMUST00000225476.2 |
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| CDS CCA 90 bp | ATGCAAGCCCGGAACACCAGCTCCTCTGTCAGCGGTGCAATAACTTaGTTTCGTAGCCAGCGCATGTCCAGGACAACCTTCAGCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: MQARNTSSSVSGAIT*FRSQRMSRTTFSPS Trigger: AGATGGGCTGAAGGTTGTCCTGGACATGCGCTGGCTACGAAACCAAGTTATTGCACCGCTGACAGAGGAGCTGGTGTTCCGGGCTTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225264.2 |
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| CDS GCA 90 bp | ACCTTCAGCCCATCTGTCAGGTCACAAGGGCAATCCATAGAGAGCTaGATCAGTGGACCCAGGAAAAGGATCATAGTTAGCAGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: TFSPSVRSQGQSIES*ISGPRKRIIVSSRG Trigger: GCCCCTGCTGCTAACTATGATCCTTTTCCTGGGTCCACTGATGCAGCTCTCTATGGATTGCCCTTGTGACCTGACAGATGGGCTGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000025823.6 ENSMUST00000224675.3 ENSMUST00000224707.2 ENSMUST00000225264.2 ENSMUST00000225375.2 ENSMUST00000225476.2 ENSMUST00000237022.2 ENSMUST00000237059.2 |
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| CDS CCA 90 bp | AGCTGTATAAGCACCGAAGACAGCGGTGTAGGAGAACTGGAACGCTaGAGATGGAGGCTGCAGACACGAAGATACTTCCCACACTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SCISTEDSGVGELER*RWRLQTRRYFPHCS Trigger: AGAGCAGTGTGGGAAGTATCTTCGTGTCTGCAGCCTCCATCTCCAGCGTTCCAGTTCTCCTACACCGCTGTCTTCGGTGCTTATACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237022.2 |
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| CDS-3UTR CAA 90 bp | GGCTGCACACACTGCAGGGAAGCCCATGTAGTTGCAGAAAGAGTGGCAGAGAACGGCTTTTCCTCAGTCTaGAAGACTCACCCAGGACAA | + |
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Preference number: 5 (lower is better) Translates to: GCTHCREAHVVAERVAENGFSSV*KTHPGQ Trigger: TTGTCCTGGGTGAGTCTTCAAGACTGAGGAAAAGCC...GTTCTCTGCCACTCTTTCTGCAACTACATGGGCTTCCCTGCAGTGTGTGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| CDS GCA 72 bp | GGCCCAGACCCGTGCACGGCGCTAGCATGGGCAGCATaGAAGCCCGGAACACCAGCTCCTCTGTCAGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPDPCTALAWAA*KPGTPAPLSAV Trigger: CACCGCTGACAGAGGAGCTGGTGTTCCGGGCTTGCATGCTGCCCATGCTAGCGCCGTGCACGGGTCTGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000025823.6 ENSMUST00000224675.3 ENSMUST00000224707.2 ENSMUST00000225264.2 ENSMUST00000225375.2 ENSMUST00000225476.2 ENSMUST00000237022.2 ENSMUST00000237059.2 |
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| CDS CCA 72 bp | ACACAGCAGGGCCCAGACCCGTGCACGGCGCTAGCATaGGCAGCATGCAAGCCCGGAACACCAGCTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TQQGPDPCTALA*AACKPGTPAPL Trigger: CAGAGGAGCTGGTGTTCCGGGCTTGCATGCTGCCCATGCTAGCGCCGTGCACGGGTCTGGGCCCTGCTGTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000025823.6 ENSMUST00000224675.3 ENSMUST00000224707.2 ENSMUST00000225264.2 ENSMUST00000225375.2 ENSMUST00000225476.2 ENSMUST00000237022.2 ENSMUST00000237059.2 |
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| CDS CAA 90 bp | AGAGGGGACAAGCTGGACACTACCAGGACACTGGTGGAACGCCGCTaGATAACAGCGGGGTGGTCCCTGGGCAGCTCGCTCTTCCACACG | + |
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Preference number: 6 (lower is better) Translates to: RGDKLDTTRTLVERR*ITAGWSLGSSLFHT Trigger: CGTGTGGAAGAGCGAGCTGCCCAGGGACCACCCCGCTGTTATCAAGCGGCGTTCCACCAGTGTCCTGGTAGTGTCCAGCTTGTCCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000225375.2 ENSMUST00000225476.2 |
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| CDS TCA 72 bp | ACACGTAGAGGCTGCCCACGTAGGAGCAGGCGAGGCTaGAGCAGGAGAACACAGACACCCAGCAGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: TRRGCPRRSRRG*SRRTQTPSSTA Trigger: GGCTGTGCTGCTGGGTGTCTGTGTTCTCCTGCTTCAGCCTCGCCTGCTCCTACGTGGGCAGCCTCTACGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000225375.2 ENSMUST00000225476.2 |
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| CDS CAA 72 bp | GCAGCGGGCCCAAGAACGAGGGGCTTTTCCTCAGTCTaGAAGACTCACCCAGGACAACCTTCAGCCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: AAGPRTRGFSSV*KTHPGQPSAHL Trigger: CAGATGGGCTGAAGGTTGTCCTGGGTGAGTCTTCAAGACTGAGGAAAAGCCCCTCGTTCTTGGGCCCGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| CDS TCA 72 bp | AATGCCCTCCAGCCTGAAGCCCATCAAGGTAAGCAGTaGTGTGCCTGGCTGGATGCCAGTGAGTTCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: NALQPEAHQGKQ*CAWLDASEFPP Trigger: TGGAGGGAACTCACTGGCATCCAGCCAGGCACATCACTGCTTACCTTGATGGGCTTCAGGCTGGAGGGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025823.6 ENSMUST00000225264.2 ENSMUST00000225476.2 |
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| CDS TCA 72 bp | CAGCGGGCCCAAGAACGAGGGGCTTTTCCTCAGTCTTaGAGACTCACCCAGGACAACCTTCAGCCCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: QRAQERGAFPQS*RLTQDNLQPIC Trigger: ACAGATGGGCTGAAGGTTGTCCTGGGTGAGTCTTCAAGACTGAGGAAAAGCCCCTCGTTCTTGGGCCCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225476.2 |
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| CDS CCA 72 bp | CGGAACACCAGCTCCTCTGTCAGCGGTGCAATAACTTaGTTTCGTAGCCAGCGCATGTCCAGGACAACCTTC | + |
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Preference number: 6 (lower is better) Translates to: RNTSSSVSGAIT*FRSQRMSRTTF Trigger: GAAGGTTGTCCTGGACATGCGCTGGCTACGAAACCAAGTTATTGCACCGCTGACAGAGGAGCTGGTGTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225264.2 |
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| CDS CCA 72 bp | GAAGACAGCGGTGTAGGAGAACTGGAACGCTGGAGATaGAGGCTGCAGACACGAAGATACTTCCCACACTGC | + |
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Preference number: 6 (lower is better) Translates to: EDSGVGELERWR*RLQTRRYFPHC Trigger: GCAGTGTGGGAAGTATCTTCGTGTCTGCAGCCTCCATCTCCAGCGTTCCAGTTCTCCTACACCGCTGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237022.2 |
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| CDS CCA 72 bp | AGCACCGAAGACAGCGGTGTAGGAGAACTGGAACGCTaGAGATGGAGGCTGCAGACACGAAGATACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: STEDSGVGELER*RWRLQTRRYFP Trigger: TGGGAAGTATCTTCGTGTCTGCAGCCTCCATCTCCAGCGTTCCAGTTCTCCTACACCGCTGTCTTCGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237022.2 |
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| CDS GCA 72 bp | CCATCTGTCAGGTCACAAGGGCAATCCATAGAGAGCTaGATCAGTGGACCCAGGAAAAGGATCATAGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: PSVRSQGQSIES*ISGPRKRIIVS Trigger: GCTAACTATGATCCTTTTCCTGGGTCCACTGATGCAGCTCTCTATGGATTGCCCTTGTGACCTGACAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000025823.6 ENSMUST00000224675.3 ENSMUST00000224707.2 ENSMUST00000225264.2 ENSMUST00000225375.2 ENSMUST00000225476.2 ENSMUST00000237022.2 ENSMUST00000237059.2 |
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