Pregenerated sensors for RCC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040945Ensembl transcript IDs: ENSMUST00000038893.6, ENSMUST00000071169.9, ENSMUST00000138808.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTaGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTGAAGCG | + |
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Preference number: 1 (lower is better) Translates to: RGTVRTLTLPSRPRH*PRQTPCKARSGCEA Trigger: CGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR TCA 90 bp | GCACACAGGCGGCAACGGAGGGCCACAGAGGACCGAGGACACATCTaGCTGCTGGATGACCAACCTCTAACTGCCCACCCCATACCCCAC | + |
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Preference number: 1 (lower is better) Translates to: AHRRQRRATEDRGHI*LLDDQPLTAHPIPH Trigger: GTGGGGTATGGGGTGGGCAGTTAGAGGTTGGTCATCCAGCAGTCAGATGTGTCCTCGGTCCTCTGTGGCCCTCCGTTGCCGCCTGTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR TCA 90 bp | GCAACGGAGGGCCACAGAGGACCGAGGACACATCTGACTGCTGGATaGCCAACCTCTAACTGCCCACCCCATACCCCACGGTCCCTATTC | + |
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Preference number: 1 (lower is better) Translates to: ATEGHRGPRTHLTAG*PTSNCPPHTPRSLF Trigger: GAATAGGGACCGTGGGGTATGGGGTGGGCAGTTAGAGGTTGGTCATCCAGCAGTCAGATGTGTCCTCGGTCCTCTGTGGCCCTCCGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR TCA 90 bp | ACGGCACTGGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTaGAGCGCTGGGGCGGAGGAAAGCGACAGACTGGGTCATTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: TALAETDTLQSQKRL*SAGAEESDRLGHFW Trigger: CCAAAAATGACCCAGTCTGTCGCTTTCCTCCGCCCCAGCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR TCA 90 bp | CCAGCAGGGACAGATGGACGGACGGCTCCCGTCCAGTACATGAAGTaGGGGGCGGTGTCTGGGGTGACCTGGACAAAGCAGGTTAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: PAGTDGRTAPVQYMK*GAVSGVTWTKQVSF Trigger: AAAACTAACCTGCTTTGTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTCCGTCCATCTGTCCCTGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR GCA 90 bp | GAAAGTGACAGTCCCTCTCTCACGTGGCACCCACTCGGATCACAATaGTCATCACGGCTGGAATGGGAGGGCAGGACAAGGACACTCAAG | + |
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Preference number: 1 (lower is better) Translates to: ESDSPSLTWHPLGSQ*SSRLEWEGRTRTLK Trigger: CTTGAGTGTCCTTGTCCTGCCCTCCCATTCCAGCCGTGATGAGCATTGTGATCCGAGTGGGTGCCACGTGAGAGAGGGACTGTCACTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR CCA 90 bp | CTCACGTGGCACCCACTCGGATCACAATGCTCATCACGGCTGGAATaGGAGGGCAGGACAAGGACACTCAAGAGCAGGGAGAAAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: LTWHPLGSQCSSRLE*EGRTRTLKSREKRN Trigger: ATTTCTTTTCTCCCTGCTCTTGAGTGTCCTTGTCCTGCCCTCCCATTCCAGCCGTGATGAGCATTGTGATCCGAGTGGGTGCCACGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR CCA 90 bp | CTGACTGCCAGCTTTAGGTTTGCTCCCTGGAAGATGAGCCCAACTTaGCTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAA | + |
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Preference number: 1 (lower is better) Translates to: LTASFRFAPWKMSPT*LRATVSSVLLVTTQ Trigger: TTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAGCCAAGTTGGGCTCATCTTCCAGGGAGCAAACCTAAAGCTGGCAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | AGACGGGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGGGGGAGGGGGCGTGGTaGGCAGGATCTGCACTGACA | + |
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Preference number: 2 (lower is better) Translates to: RRGTVRTLTLPSRPRHWPGEGAW*AGSALT Trigger: TGTCAGTGCAGATCCTGCGCACCACGCCCCCTCCCC...CGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCCCGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCACAAAGTCAATACCAGGACGGGCTCGGCAGAGGGCACTTGGGGGAGGGGGCGTGGAAAGGACAGCTaGCACGAGGGGAGGGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: SHKVNTRTGSAEGTWGRGRGKDS*HEGRAG Trigger: GCCGGCCCTCCCCTCGTGGCAGCTGTCCTTTCCACG...CCCCCTCCCCCAAGTGCCCTCTGCCGAGCCCGTCCTGGTATTGACTTTGTGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGCCTTCCTCCTGTGAGGGGCGGTGTCTaGGGTGACCTGGACAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GAPGQPEWFLPRASRLPPVRGGV*GDLDKA Trigger: TGCTTTGTCCAGGTCACCCCAGACACCGCCCCTCAC...AGGAGGAAGGCGGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAGACAGGTGGCAGAGGCAAGTaGGAGGGCCCACAAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: GDSEDSDPSQQATALAETGGRGK*EGPQAS Trigger: ACTTGCTTGTGGGCCCTCCCACTTGCCTCTGCCACC...TGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGCCTTCCTCCTGCCAAAAGGCCCACATaGGCCTTGCAGACAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GAPGQPEWFLPRASRLPPAKRPT*ALQTAS Trigger: GCTTGCTGTCTGCAAGGCCCATGTGGGCCTTTTGGC...AGGAGGAAGGCGGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR TCA 90 bp | GGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAGACAGCGGCTGCTGGTTCCTaGAAAGGCCGTTTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GDSEDSDPSQQATALAETAAAGS*KGRFCL Trigger: CAGACAGAAACGGCCTTTTCAGGAACCAGCAGCCGC...TGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGGCCGGGCACTTTGCGCTCATCCACTGCAGGCCTCTAGCCAGGGCGGCTCCGAGACAGACACCTTaGAAAGCCAGAAGCGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: AVAGHFALIHCRPLARAAPRQTP*KARSGC Trigger: ACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGG...AGCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGGCCGGGCACTTTGCGCTCATCCACTGCAGGCCTCTAGCCAGGGCGGCTCTCTGGACAGACTATTaGTGGACAGACGGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: AVAGHFALIHCRPLARAALWTDY*WTDGGQ Trigger: CTGTCCCCCGTCTGTCCAGCAATAGTCTGTCCAGAG...AGCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR TCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACGCGGCTGCTGGTTCCTaGAAAGGCCGTTTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDAAAGS*KGRFCL Trigger: CAGACAGAAACGGCCTTTTCAGGAACCAGCAGCCGC...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAGACATGGCCTAGCGGCTGCTaGTTCCTGAAAAGGCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: GDSEDSDPSQQATALAETWPSGC*FLKRPF Trigger: AAACGGCCTTTTCAGGAACCAGCAGCCGCTAGGCCA...TGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAAAGTCAATACCAGGACGGGCTCGGCAGAGGGCACTTGGGGGAGGGGGGCCAAAAGGCCCACATaGGCCTTGCAGACAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SHKVNTRTGSAEGTWGRGAKRPT*ALQTAS Trigger: GCTTGCTGTCTGCAAGGCCCATGTGGGCCTTTTGGC...CCCCCTCCCCCAAGTGCCCTCTGCCGAGCCCGTCCTGGTATTGACTTTGTGGCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACCCGAGACAGACACCTTaGAAAGCCAGAAGCGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDPRQTP*KARSGC Trigger: ACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGG...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCTCTAGCCAGGGCGGCTaGCTGCCAGCTTTAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPSSQGG*LPALGL Trigger: CAAACCTAAAGCTGGCAGTCAGCCGCCCTGGCTAGA...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGGCCCACATGGGCCTTaGAGACAGCAAGCCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPGPHGP*RQQARN Trigger: ATTCCTGGCTTGCTGTCTGCAAGGCCCATGTGGGCC...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAGACACAGGGGGAAGATGGCTaGTTCTACAAATGCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GDSEDSDPSQQATALAETQGEDG*FYKCFS Trigger: GCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTG...TGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACTGGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTGAAGCGCTGGTCATCACGGCTGGAATaGGAGGGCAGGACAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GTGRDRHLAKPEAAVKRWSSRLE*EGRTRT Trigger: TGTCCTTGTCCTGCCCTCCCATTCCAGCCGTGATGA...CCAGCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAAAGTCAATACCAGGACGGGCTCGGCAGAGGGCACTTGGGGGAGGGGGTGCAAGCAGAACACTTaGCCAGGACAAGAGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SHKVNTRTGSAEGTWGRGCKQNT*PGQEWP Trigger: TGGCCACTCTTGTCCTGGCCAAGTGTTCTGCTTGCA...CCCCCTCCCCCAAGTGCCCTCTGCCGAGCCCGTCCTGGTATTGACTTTGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGGCCGGGCACTTTGCGCTCATCCACTGCAGGCCTCTAGCCAGGGCGGCTGTGTCTGGGGTGACCTaGACAAAGCAGGTTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: AVAGHFALIHCRPLARAAVSGVT*TKQVSF Trigger: AAAACTAACCTGCTTTGTCCAGGTCACCCCAGACAC...AGCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAACTAACTCCAGTACGTGGAAAGGACAGCTaGCACGAGGGGAGGGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: LRATVSSVLLVTTQLTPVRGKDS*HEGRAG Trigger: GCCGGCCCTCCCCTCGTGGCAGCTGTCCTTTCCACG...TACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACGGCTGCTTCTACAAATaGTTCAGCCAAAAGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDGCFYK*FSQKAH Trigger: GTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCC...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCTCATCACGGCTGGAATaGGAGGGCAGGACAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPSSRLE*EGRTRT Trigger: TGTCCTTGTCCTGCCCTCCCATTCCAGCCGTGATGA...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCTGCAAGCAGAACACTTaGCCAGGACAAGAGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPCKQNT*PGQEWP Trigger: TGGCCACTCTTGTCCTGGCCAAGTGTTCTGCTTGCA...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCAAGATGAGCCCAACTTaGCTCAGGGCTACTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPKMSPT*LRATVS Trigger: GGACACAGTAGCCCTGAGCCAAGTTGGGCTCATCTT...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGCCTTCCTCCTAAGGCAGGCTGGCTATaGGCAAATGTTTTAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GAPGQPEWFLPRASRLPPKAGWL*ANVLIK Trigger: TTTGATTAAAACATTTGCTCATAGCCAGCCTGCCTT...AGGAGGAAGGCGGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGGCCGGGCACTTTGCGCTCATCCACTGCAGGCCTCTAGCCAGGGCGGCTAAGGCAGGCTGGCTATaGGCAAATGTTTTAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: AVAGHFALIHCRPLARAAKAGWL*ANVLIK Trigger: TTTGATTAAAACATTTGCTCATAGCCAGCCTGCCTT...AGCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR TCA 90 bp | GGCACTGGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTGAAGCGCTGGGCAAAAGCAAACCCATaGCCCTCAAGACCAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: GTGRDRHLAKPEAAVKRWAKANP*PSRPDF Trigger: AAAGTCTGGTCTTGAGGGTCATGGGTTTGCTTTTGC...CCAGCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR GCA 90 bp | AACACTTGGCCAGGACAAGAGTGGCCAAGTCTCAGAGCAGGGCGGCCATCCCAGGGCTGCTTCTACAAATaGTTCAGCCAAAAGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: NTWPGQEWPSLRAGRPSQGCFYK*FSQKAH Trigger: GTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCC...CTGGGATGGCCGCCCTGCTCTGAGACTTGGCCACTCTTGTCCTGGCCAAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACATGGTGGCAGAGGCAAGTaGGAGGGCCCACAAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PPGGRWLLLQMLQPKGPHGGRGK*EGPQAS Trigger: ACTTGCTTGTGGGCCCTCCCACTTGCCTCTGCCACC...ATGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAACTAACTCCAGTATGGCCAGGACAAGAGTaGCCAAGTCTCAGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LRATVSSVLLVTTQLTPVWPGQE*PSLRAG Trigger: CCCTGCTCTGAGACTTGGCCACTCTTGTCCTGGCCA...TACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR CAA 90 bp | AAGATGAGCCCAACTTGGCTCAGGGCTACTGTGTCCTCAGTCCTCTaGGTGACCACACAACTAACTCCAGTAGACCTCCTGGGACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: KMSPTWLRATVSSVL*VTTQLTPVDLLGQK Trigger: CTTCTGTCCCAGGAGGTCTACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAGCCAAGTTGGGCTCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR GCA 72 bp | GAGGGGGCTGTGGCCGGGCACTTTGCGCTCATCCACTaGAGGCCTCTAGCCAGGGCGGCTGACTGCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: EGAVAGHFALIH*RPLARAADCQL Trigger: AAGCTGGCAGTCAGCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGCCCCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR GCA 72 bp | TTTAGCCTAAAGGGAGGGGGCTGTGGCCGGGCACTTTaGGCTCATCCACTGCAGGCCTCTAGCCAGGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: FSLKGGGCGRAL*AHPLQASSQGG Trigger: GCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGCCCCCTCCCTTTAGGCTAAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR TCA 72 bp | AGGTGGCAGAGGCAAGTGGGAGGGCCCACAAGCAAGTaGCCGGGTCTCTCAAAGCGGGCAGGCAGGAATCGG | + |
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Preference number: 3 (lower is better) Translates to: RWQRQVGGPTSK*PGLSKRAGRNR Trigger: CCGATTCCTGCCTGCCCGCTTTGAGAGACCCGGTCACTTGCTTGTGGGCCCTCCCACTTGCCTCTGCCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR CCA 72 bp | GTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTaGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGC | + |
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Preference number: 3 (lower is better) Translates to: VRTLTLPSRPRH*PRQTPCKARSG Trigger: GCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR-3UTR CAA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACAGGCCCACATGGGCCTaGCAGACAGCAAGCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDRPTWA*QTASQE Trigger: TTCCTGGCTTGCTGTCTGCAAGGCCCATGTGGGCCT...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| 3UTR TCA 72 bp | CGGCAACGGAGGGCCACAGAGGACCGAGGACACATCTaGCTGCTGGATGACCAACCTCTAACTGCCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: RQRRATEDRGHI*LLDDQPLTAHP Trigger: GGGGTGGGCAGTTAGAGGTTGGTCATCCAGCAGTCAGATGTGTCCTCGGTCCTCTGTGGCCCTCCGTTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR TCA 72 bp | GCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTaGAGCGCTGGGGCGGAGGAAAGCGACAGACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AETDTLQSQKRL*SAGAEESDRLG Trigger: ACCCAGTCTGTCGCTTTCCTCCGCCCCAGCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CCA 72 bp | GACCAGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTaGTTCCTGCCCAGGGCTTCCCGCCTTCCTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: DQKISGAPGQPE*FLPRASRLPPV Trigger: GACAGGAGGAAGGCGGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCTGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGCCGAGACAGACACCTaGCAAAGCCAGAAGCGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPAETDT*QSQKRL Trigger: CAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGC...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR TCA 72 bp | GGCCACAGAGGACCGAGGACACATCTGACTGCTGGATaGCCAACCTCTAACTGCCCACCCCATACCCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: GHRGPRTHLTAG*PTSNCPPHTPR Trigger: CCGTGGGGTATGGGGTGGGCAGTTAGAGGTTGGTCATCCAGCAGTCAGATGTGTCCTCGGTCCTCTGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR TCA 72 bp | ACAGATGGACGGACGGCTCCCGTCCAGTACATGAAGTaGGGGGCGGTGTCTGGGGTGACCTGGACAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDGRTAPVQYMK*GAVSGVTWTKQ Trigger: CTGCTTTGTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTCCGTCCATCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGCCTTCCTCCTTTCCCGTGGGAAAGCTaGGGTGAGAATTTTAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GAPGQPEWFLPRASRLPPFPWES*GENFSL Trigger: TAGGCTAAAATTCTCACCCAAGCTTTCCCACGGGAA...AGGAGGAAGGCGGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACGAACCCAATGCACCCTaGGTCAACTTTTGCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDEPNAP*VNFCFL Trigger: TAGGAAGCAAAAGTTGACCAAGGGTGCATTGGGTTC...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR GCA 72 bp | GGATGGAGACCGACCACCAGGGATTGGCCTAGCGGCTaGTGGTTCCTGAAAAGGCCGTTTCTGTCTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRPTTRDWPSG*WFLKRPFLSGK Trigger: TTTCCCAGACAGAAACGGCCTTTTCAGGAACCAGCAGCCGCTAGGCCAATCCCTGGTGGTCGGTCTCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CCA 72 bp | CACCCACTCGGATCACAATGCTCATCACGGCTGGAATaGGAGGGCAGGACAAGGACACTCAAGAGCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HPLGSQCSSRLE*EGRTRTLKSRE Trigger: CTCCCTGCTCTTGAGTGTCCTTGTCCTGCCCTCCCATTCCAGCCGTGATGAGCATTGTGATCCGAGTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CCA 72 bp | CGTGGCACCCACTCGGATCACAATGCTCATCACGGCTaGAATGGGAGGGCAGGACAAGGACACTCAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGTHSDHNAHHG*NGRAGQGHSRA Trigger: TGCTCTTGAGTGTCCTTGTCCTGCCCTCCCATTCCAGCCGTGATGAGCATTGTGATCCGAGTGGGTGCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAACTAACTCCAGTAAGGCCCACATGGGCCTaGCAGACAGCAAGCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRATVSSVLLVTTQLTPVRPTWA*QTASQE Trigger: TTCCTGGCTTGCTGTCTGCAAGGCCCATGTGGGCCT...TACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CCA 72 bp | GTTTCTGTCTGGGAAAGTGACAGTCCCTCTCTCACGTaGCACCCACTCGGATCACAATGCTCATCACGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSVWESDSPSLT*HPLGSQCSSRL Trigger: CAGCCGTGATGAGCATTGTGATCCGAGTGGGTGCCACGTGAGAGAGGGACTGTCACTTTCCCAGACAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | CACGGCACTGGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTGAAGCGCACCCTTGGTCAACTTTaGCTTCCTAAATTCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HGTGRDRHLAKPEAAVKRTLGQL*LPKFLV Trigger: GACAAGGAATTTAGGAAGCAAAAGTTGACCAAGGGT...GCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR GCA 72 bp | CTACAAATGCTTCAGCCAAAAGGCCCACATGGGCCTTaGAGACAGCAAGCCAGGAATAGCTATGAGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQMLQPKGPHGP*RQQARNSYEGR Trigger: CCTCCCCTCATAGCTATTCCTGGCTTGCTGTCTGCAAGGCCCATGTGGGCCTTTTGGCTGAAGCATTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CCA 72 bp | AGCTTTAGGTTTGCTCCCTGGAAGATGAGCCCAACTTaGCTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFRFAPWKMSPT*LRATVSSVLLV Trigger: CACCAAGAGGACTGAGGACACAGTAGCCCTGAGCCAAGTTGGGCTCATCTTCCAGGGAGCAAACCTAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACATTGCTTCCTAAATTCCTaGTCTGACTTCTGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PPGGRWLLLQMLQPKGPHCFLNS*SDFWSQ Trigger: CTGGGACCAGAAGTCAGACAAGGAATTTAGGAAGCA...ATGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAACTAACTCCAGTATGCTTCCTAAATTCCTaGTCTGACTTCTGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRATVSSVLLVTTQLTPVCFLNS*SDFWSQ Trigger: CTGGGACCAGAAGTCAGACAAGGAATTTAGGAAGCA...TACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACAACCCTTGGTCAACTTTaGCTTCCTAAATTCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PTRGKMAASTNASAKRPTTLGQL*LPKFLV Trigger: GACAAGGAATTTAGGAAGCAAAAGTTGACCAAGGGT...TGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | AGACGGGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGGTCAAGGCCAGGGTGTaGTTGCGCCCACAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRGTVRTLTLPSRPRHWPVKARV*LRPQAA Trigger: GGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGAC...CGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCCCGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | AGACGGGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGGGCTGCCAGCACGATTaGCTCATGGCTGAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRGTVRTLTLPSRPRHWPGCQHD*LMAEGL Trigger: GAGGCCCTCAGCCATGAGGCAATCGTGCTGGCAGCC...CGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCCCGTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGCCGGGCACTTTGCGCTCATCCACTGCAGGCCTCTAGCCAGGGCGGCTGGGACGGCATCTGTCTaGTTCCCGAGACCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVAGHFALIHCRPLARAAGTASV*FPRPSC Trigger: GCAGCTGGGTCTCGGGAACCAGACAGATGCCGTCCC...AGCCGCCCTGGCTAGAGGCCTGCAGTGGATGAGCGCAAAGTGCCCGGCCACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | AGCCACAAAGTCAATACCAGGACGGGCTCGGCAGAGGGCACTTGGGGGAGGGGGAGGCCAGGGTGTGGTTaGGCCCACAGGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHKVNTRTGSAEGTWGRGRPGCG*AHRLPA Trigger: TGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCT...CCCCCTCCCCCAAGTGCCCTCTGCCGAGCCCGTCCTGGTATTGACTTTGTGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACAGGCCAGGGTGTGGTTaGGCCCACAGGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDRPGCG*AHRLPA Trigger: TGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCT...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | CACGGCACTGGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTGAAGCGCGTCAAGGCCAGGGTGTaGTTGCGCCCACAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGTGRDRHLAKPEAAVKRVKARV*LRPQAA Trigger: GGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGAC...GCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | AGCCACAAAGTCAATACCAGGACGGGCTCGGCAGAGGGCACTTGGGGGAGGGGGACGCGCTCCTTCGTGTaGTCGGGCTCCGTGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SHKVNTRTGSAEGTWGRGTRSFV*SGSVMI Trigger: GATCATCACGGAGCCCGAGCACACGAAGGAGCGCGT...CCCCCTCCCCCAAGTGCCCTCTGCCGAGCCCGTCCTGGTATTGACTTTGTGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAGACAGGGCTTCCACCCTCTTaGTATCACCATGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSEDSDPSQQATALAETGLPPS*YHHGPA Trigger: AGCTGGGCCATGGTGATACCAAGAGGGTGGAAGCCC...TGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR TCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACCGCAGGCCATCTTGGTaGTTGGCTGCCCGTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDRRPSW*LAARCT Trigger: TGTACAACGGGCAGCCAATCACCAAGATGGCCTGCG...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR TCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACGATGAACTTGCCATCTaGGTTGTGCCCCAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDDELAI*VVPQLA Trigger: GGCCAGCTGGGGCACAACTCAGATGGCAAGTTCATC...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | AGCCACAAAGTCAATACCAGGACGGGCTCGGCAGAGGGCACTTGGGGGAGGGGGGGGCTTCCACCCTCTTaGTATCACCATGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHKVNTRTGSAEGTWGRGGLPPS*YHHGPA Trigger: AGCTGGGCCATGGTGATACCAAGAGGGTGGAAGCCC...CCCCCTCCCCCAAGTGCCCTCTGCCGAGCCCGTCCTGGTATTGACTTTGTGGCT 62% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCGCCTTCCTCCTCAATTCCCCGAAGGTTaGCGATGGACCCCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GAPGQPEWFLPRASRLPPQFPEG*RWTPTD Trigger: ATCAGTTGGGGTCCATCGCCAACCTTCGGGGAATTG...AGGAGGAAGGCGGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR TCA 90 bp | CACGGCACTGGCCGAGACAGACACCTTGCAAAGCCAGAAGCGGCTGTGAAGCGCCGCAGGCCATCTTGGTaGTTGGCTGCCCGTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HGTGRDRHLAKPEAAVKRRRPSW*LAARCT Trigger: TGTACAACGGGCAGCCAATCACCAAGATGGCCTGCG...GCGCTTCACAGCCGCTTCTGGCTTTGCAAGGTGTCTGTCTCGGCCAGTGCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACTACTCAGGTAGCCTCTaGAGCTTCTCCTTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDYSGSL*SFSFSA Trigger: GGCTGAGAAGGAGAAGCTGCAGAGGCTACCTGAGTA...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACAGGCTGCCAGCACGATTaGCTCATGGCTGAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTRGKMAASTNASAKRPTGCQHD*LMAEGL Trigger: GAGGCCCTCAGCCATGAGGCAATCGTGCTGGCAGCC...TGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACAATTCTGACCAAGGTTaGGGTACGCAGCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDNSDQG*GTQLAV Trigger: AACAGCAAGCTGCGTACCGCAACCTTGGTCAGAATT...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR CCA 90 bp | AACACTTGGCCAGGACAAGAGTGGCCAAGTCTCAGAGCAGGGCGGCCATCCCAGCAATTCCCCGAAGGTTaGCGATGGACCCCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTWPGQEWPSLRAGRPSQQFPEG*RWTPTD Trigger: ATCAGTTGGGGTCCATCGCCAACCTTCGGGGAATTG...CTGGGATGGCCGCCCTGCTCTGAGACTTGGCCACTCTTGTCCTGGCCAAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CAA 72 bp | CCCTGCCGCTACAGAAGCTTGTCTCTGGACAGACTATaGCTGGACAGACGGGGGACAGTGAGGACTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PCRYRSLSLDRL*LDRRGTVRTLT Trigger: GGTCAGAGTCCTCACTGTCCCCCGTCTGTCCAGCAATAGTCTGTCCAGAGACAAGCTTCTGTAGCGGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | AACACTTGGCCAGGACAAGAGTGGCCAAGTCTCAGAGCAGGGCGGCCATCCCAGTCATATTCTATCCTCTaGGCCCGGGCGATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTWPGQEWPSLRAGRPSQSYSIL*ARAMNL Trigger: CAAGTTCATCGCCCGGGCGCAGAGGATAGAATATGA...CTGGGATGGCCGCCCTGCTCTGAGACTTGGCCACTCTTGTCCTGGCCAAGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCAATTCTGACCAAGGTTaGGGTACGCAGCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPNSDQG*GTQLAV Trigger: AACAGCAAGCTGCGTACCGCAACCTTGGTCAGAATT...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAACTAACTCCAGTAGATGAACTTGCCATCTaGGTTGTGCCCCAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRATVSSVLLVTTQLTPVDELAI*VVPQLA Trigger: GGCCAGCTGGGGCACAACTCAGATGGCAAGTTCATC...TACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACATTCCCGAGACCCAGCTaGCCCATTTTATTCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PTRGKMAASTNASAKRPTFPRPS*PILFSP Trigger: CGGAGAGAATAAAATGGGGCAGCTGGGTCTCGGGAA...TGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CAA 72 bp | CCAACTTGGCTCAGGGCTACTGTGTCCTCAGTCCTCTaGGTGACCACACAACTAACTCCAGTAGACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTWLRATVSSVL*VTTQLTPVDLL Trigger: CAGGAGGTCTACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAGCCAAGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | CCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACATTTCCCGAGACCCAGCTaGCCCATTTTATTCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPGGRWLLLQMLQPKGPHFPRPS*PILFSP Trigger: CGGAGAGAATAAAATGGGGCAGCTGGGTCTCGGGAA...ATGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| CDS-3UTR GCA 90 bp | CCACCAGGGGGAAGATGGCTGCTTCTACAAATGCTTCAGCCAAAAGGCCCACATTACTCAGGTAGCCTCTaGAGCTTCTCCTTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGGRWLLLQMLQPKGPHYSGSL*SFSFSA Trigger: GGCTGAGAAGGAGAAGCTGCAGAGGCTACCTGAGTA...ATGTGGGCCTTTTGGCTGAAGCATTTGTAGAAGCAGCCATCTTCCCCCTGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
||
| 3UTR CAA 72 bp | TTTGGTACCAGAGCCAAGCAAATGCAAGCAGAACACTaGGCCAGGACAAGAGTGGCCAAGTCTCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FGTRAKQMQAEH*ARTRVAKSQSR Trigger: CCTGCTCTGAGACTTGGCCACTCTTGTCCTGGCCAAGTGTTCTGCTTGCATTTGCTTGGCTCTGGTACCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCTACTGTGTCCTCAGTCCTCTTGGTGACCACACAACTAACTCCAGTATCATATTCTATCCTCTaGGCCCGGGCGATGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: LRATVSSVLLVTTQLTPVSYSIL*ARAMNL Trigger: CAAGTTCATCGCCCGGGCGCAGAGGATAGAATATGA...TACTGGAGTTAGTTGTGTGGTCACCAAGAGGACTGAGGACACAGTAGCCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS GCA 90 bp | CGTCCAGCTCCGGGCCGTCCTCGTCGCCGCTGCTGCCGCCGCCGCTaGTGCTGCTGCAGCGCTCGGGCCGCTCGCGCTTCCTGCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: RPAPGRPRRRCCRRR*CCCSARAARASCPR Trigger: CCGCGGGCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGACGAGGACGGCCCGGAGCTGGACG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 ENSMUST00000138808.8 |
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| CDS-3UTR CAA 90 bp | GACGGCTCCCGTCCAGTACATGAAGTGAGGGGCGGTGTCTGGGGTGACCTGGACAAGGCCAGGGTGTGGTaGCGCCCACAGGCTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: DGSRPVHEVRGGVWGDLDKARVW*RPQAAS Trigger: GCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTT...GTCCAGGTCACCCCAGACACCGCCCCTCACTTCATGTACTGGACGGGAGCCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS-3UTR CAA 90 bp | AGAAGATTTCAGGAGCCCCTGGACAGCCAGAGTGGTTCCTGCCCAGGGCTTCCCAAGGCCAGGGTGTGGTaGCGCCCACAGGCTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRFQEPLDSQSGSCPGLPKARVW*RPQAAS Trigger: GCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTT...GGGAAGCCCTGGGCAGGAACCACTCTGGCTGTCCAGGGGCTCCTGAAATCTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAGACAAACTTGCCATCTGAGTaGTGCCCCAGCTGGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: GDSEDSDPSQQATALAETNLPSE*CPSWPY Trigger: GTATGGCCAGCTGGGGCACAACTCAGATGGCAAGTT...TGTCTCGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS-3UTR CAA 90 bp | AGACGGGGGACAGTGAGGACTCTGACCCTTCCCAGCAGGCCACGGCACTGGCCGAAGATCTGCCCGTCCTaGGTCTTCTCGATGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: RRGTVRTLTLPSRPRHWPKICPS*VFSMKM Trigger: CATCTTCATCGAGAAGACCAAGGACGGGCAGATCTT...CGGCCAGTGCCGTGGCCTGCTGGGAAGGGTCAGAGTCCTCACTGTCCCCCGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS CCA 90 bp | TCTCCGAAGGCAAACACTGATCCAGTATCTGTCAAGGCCAGGGTGTaGTTGCGCCCACAGGCTGCCAGCACGATTGCCTCATGGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPKANTDPVSVKARV*LRPQAASTIASWLR Trigger: CCTCAGCCATGAGGCAATCGTGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGACAGATACTGGATCAGTGTTTGCCTTCGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS-3UTR CAA 90 bp | AACACTTGGCCAGGACAAGAGTGGCCAAGTCTCAGAGCAGGGCGGCCATCCCAGAACTTGCCATCTGAGTaGTGCCCCAGCTGGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: NTWPGQEWPSLRAGRPSQNLPSE*CPSWPY Trigger: GTATGGCCAGCTGGGGCACAACTCAGATGGCAAGTT...CTGGGATGGCCGCCCTGCTCTGAGACTTGGCCACTCTTGTCCTGGCCAAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS GCA 72 bp | GGCCGTCCTCGTCGCCGCTGCTGCCGCCGCCGCTGCTaGTGCTGCAGCGCTCGGGCCGCTCGCGCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GRPRRRCCRRRC*CCSARAARASC Trigger: GCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGACGAGGACGGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 ENSMUST00000138808.8 |
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| CDS GCA 72 bp | ATCTGTCAAGGCCAGGGTGTGGTTGCGCCCACAGGCTaGCAGCACGATTGCCTCATGGCTGAGGGCCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: ICQGQGVVAPTG*QHDCLMAEGLD Trigger: ATCGAGGCCCTCAGCCATGAGGCAATCGTGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGACAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS CAA 90 bp | CCGAAGGCAAACACTGATCCAGTATCTGTCAAGGCCAGGGTGTGGTaGCGCCCACAGGCTGCCAGCACGATTGCCTCATGGCTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PKANTDPVSVKARVW*RPQAASTIASWLRA Trigger: GGCCCTCAGCCATGAGGCAATCGTGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGACAGATACTGGATCAGTGTTTGCCTTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS GCA 72 bp | ACACTGATCCAGTATCTGTCAAGGCCAGGGTGTGGTTaGGCCCACAGGCTGCCAGCACGATTGCCTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: TLIQYLSRPGCG*AHRLPARLPHG Trigger: GCCATGAGGCAATCGTGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGACAGATACTGGATCAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS CCA 72 bp | GCAAACACTGATCCAGTATCTGTCAAGGCCAGGGTGTaGTTGCGCCCACAGGCTGCCAGCACGATTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ANTDPVSVKARV*LRPQAASTIAS Trigger: TGAGGCAATCGTGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGACAGATACTGGATCAGTGTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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| CDS CAA 72 bp | AACACTGATCCAGTATCTGTCAAGGCCAGGGTGTGGTaGCGCCCACAGGCTGCCAGCACGATTGCCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: NTDPVSVKARVW*RPQAASTIASW Trigger: CCATGAGGCAATCGTGCTGGCAGCCTGTGGGCGCAACCACACCCTGGCCTTGACAGATACTGGATCAGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038893.6 ENSMUST00000071169.9 |
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