Pregenerated sensors for RCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028896Ensembl transcript IDs: ENSMUST00000030726.13, ENSMUST00000084250.11, ENSMUST00000105951.8, ENSMUST00000155129.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTATAAAACAACTCCCACCCCTTTCCCAATACCCTGCCTTGCCTTaGCTGCCCAGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGC | + |
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Preference number: 1 (lower is better) Translates to: VIKQLPPLSQYPALP*LPSRAQHGYPVLYG Trigger: GCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGGAGTTGTTTTATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCACCTGTCCTGAGAAGCTaGGCTGGGGCCAGAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PTPFPIPCLALTAQPSPAPVLRS*AGARSQ Trigger: CTGGCTTCTGGCCCCAGCTCAGCTTCTCAGGACAGG...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCCTGTCCTGAGAAGCTaGGCTGGGGCCAGAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAPVLRS*AGARSQ Trigger: CTGGCTTCTGGCCCCAGCTCAGCTTCTCAGGACAGG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGCTCTTTTCCTGTCCTaGGAAGCTGAGCTGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PTPFPIPCLALTAQPSPAALFLS*EAELGP Trigger: TGGCCCCAGCTCAGCTTCTCAGGACAGGAAAAGAGC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAAAGCAAAGATCCTTCTaGGGTCCTCCTCCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: PTPFPIPCLALTAQPSPAKQRSF*GPPPIP Trigger: GGGGATGGGAGGAGGACCTCAGAAGGATCTTTGCTT...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAACACCCAAGGGATACTaGGATGCCTTGTGCTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PTPFPIPCLALTAQPSPATPKGY*DALCFG Trigger: CCCAAAGCACAAGGCATCCCAGTATCCCTTGGGTGT...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGCTCTTTTCCTGTCCTaGGAAGCTGAGCTGGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SRAQHGYPVLYGRKADGEALFLS*EAELGP Trigger: TGGCCCCAGCTCAGCTTCTCAGGACAGGAAAAGAGC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGATCACTCAGAGCCTTaGAAAGCCTTTGTCCAGATC | + |
|
Preference number: 2 (lower is better) Translates to: PTPFPIPCLALTAQPSPADHSEP*KAFVQI Trigger: GATCTGGACAAAGGCTTTTCAAGGCTCTGAGTGATC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAACCTGTCCTGAGAAGCTaGGCTGGGGCCAGAAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RGKQGFTESQLFRVWAAKPVLRS*AGARSQ Trigger: CTGGCTTCTGGCCCCAGCTCAGCTTCTCAGGACAGG...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTAGGATTCTGCTGTGGTaGTGGGAAAAGACAGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PFPNTLPCLDCPAEPSMARILLW*WEKTGD Trigger: ATCTCCTGTCTTTTCCCATCACCACAGCAGAATCCT...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAAAGCAAAGATCCTTCTaGGGTCCTCCTCCCATCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SRAQHGYPVLYGRKADGEKQRSF*GPPPIP Trigger: GGGGATGGGAGGAGGACCTCAGAAGGATCTTTGCTT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTGATCACTCAGAGCCTTaGAAAGCCTTTGTCCAGATC | + |
|
Preference number: 2 (lower is better) Translates to: PFPNTLPCLDCPAEPSMADHSEP*KAFVQI Trigger: GATCTGGACAAAGGCTTTTCAAGGCTCTGAGTGATC...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGGAAAAGACAGGAGATaGTATCTGTTCAGGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTPFPIPCLALTAQPSPAGKDRR*YLFRVG Trigger: TCCAACCCTGAACAGATAGCATCTCCTGTCTTTTCC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR CAA 90 bp | CGTTATAAAACAACTCCCACCCCTTTCCCAATACCCTGCCTTGCCTaGACTGCCCAGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGG | + |
|
Preference number: 2 (lower is better) Translates to: RYKTTPTPFPIPCLA*TAQPSPAWLSSPLW Trigger: CCATAGAGGACTGGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGGAGTTGTTTTATAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTGGAAAAGACAGGAGATaGTATCTGTTCAGGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAGKDRR*YLFRVG Trigger: TCCAACCCTGAACAGATAGCATCTCCTGTCTTTTCC...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACAAGGGATACTGGGATaGCTTGTGCTTTGGGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SRAQHGYPVLYGRKADGEQGILG*LVLWED Trigger: GTCCTCCCAAAGCACAAGGCATCCCAGTATCCCTTG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAACACCCAAGGGATACTaGGATGCCTTGTGCTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SRAQHGYPVLYGRKADGETPKGY*DALCFG Trigger: CCCAAAGCACAAGGCATCCCAGTATCCCTTGGGTGT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAAGGATTCTGCTGTGGTaGTGGGAAAAGACAGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SRAQHGYPVLYGRKADGERILLW*WEKTGD Trigger: ATCTCCTGTCTTTTCCCATCACCACAGCAGAATCCT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGGAAAAGACAGGAGATaGTATCTGTTCAGGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRAQHGYPVLYGRKADGEGKDRR*YLFRVG Trigger: TCCAACCCTGAACAGATAGCATCTCCTGTCTTTTCC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR CAA 90 bp | GACACCTGTTTAGAGTCAAATATTTGGCTTAGATCACTCAGAGCCTaGAAAAGCCTTTGTCCAGATCTCCCCAGGCATGGGTCCATGACA | + |
|
Preference number: 2 (lower is better) Translates to: DTCLESNIWLRSLRA*KSLCPDLPRHGSMT Trigger: TGTCATGGACCCATGCCTGGGGAGATCTGGACAAAGGCTTTTCAAGGCTCTGAGTGATCTAAGCCAAATATTTGACTCTAAACAGGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGAAGAAAAAGGATTCTaGTGTGGTGATGGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RGKQGFTESQLFRVWAAKEEKGF*CGDGKR Trigger: TCTTTTCCCATCACCACAGCAGAATCCTTTTTCTTC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR TCA 72 bp | CAACTCCCACCCCTTTCCCAATACCCTGCCTTGCCTTaGCTGCCCAGCCGAGCCCAGCATGGCTATCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: QLPPLSQYPALP*LPSRAQHGYPV Trigger: GACTGGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGGAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR GCA 72 bp | TCCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTaGCCAGCCGAGCCCAGCATGGCTATCCAGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SHPFPNTLPCLD*PAEPSMAIQSS Trigger: AGAGGACTGGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTGGATACTGGGATGCCTaGTGCTTTGGGAGGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAGYWDA*CFGRTV Trigger: AACTGTCCTCCCAAAGCACAAGGCATCCCAGTATCC...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CAA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAAGTGGGTCAGTGTTTTaGCCCATGGACACCTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: PTPFPIPCLALTAQPSPASGSVF*PMDTCL Trigger: TAAACAGGTGTCCATGGGCAAAAACACTGACCCACT...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR GCA 72 bp | CGTTATAAAACAACTCCCACCCCTTTCCCAATACCCTaGCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: RYKTTPTPFPIP*LALTAQPSPAW Trigger: CCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGGAGTTGTTTTATAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAAGCCTTGAAAAGCCTTaGTCCAGATCTCCCCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SRAQHGYPVLYGRKADGESLEKP*SRSPQA Trigger: TGCCTGGGGAGATCTGGACAAAGGCTTTTCAAGGCT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR CCA 72 bp | CTGATGGGGAAGGGACAGGTGACACCCAAGGGATACTaGGATGCCTTGTGCTTTGGGAGGACAGTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LMGKGQVTPKGY*DALCFGRTVGF Trigger: AAAACCAACTGTCCTCCCAAAGCACAAGGCATCCCAGTATCCCTTGGGTGTCACCTGTCCCTTCCCCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR CCA 72 bp | AGGAGATGCTATCTGTTCAGGGTTGGAATCTGTAGCTaGCTCTTTTCCTGTCCTGAGAAGCTGAGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RRCYLFRVGICS*LFSCPEKLSWG Trigger: GCCCCAGCTCAGCTTCTCAGGACAGGAAAAGAGCCAGCTACAGATTCCAACCCTGAACAGATAGCATCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAAGATCACTCAGAGCCTaGAAAAGCCTTTGTCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: SRAQHGYPVLYGRKADGERSLRA*KSLCPD Trigger: ATCTGGACAAAGGCTTTTCAAGGCTCTGAGTGATCT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGCTATCTGTTCAGGGTaGGAATCTGTAGCTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RGKQGFTESQLFRVWAAKAICSG*ESVAGS Trigger: AGAGCCAGCTACAGATTCCAACCCTGAACAGATAGC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR-3UTR CAA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGGCTATCTGTTCAGGGTaGGAATCTGTAGCTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SRKRTDETEEKGFCCGDGAICSG*ESVAGS Trigger: AGAGCCAGCTACAGATTCCAACCCTGAACAGATAGC...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| 3UTR TCA 72 bp | GACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTaGTGGGAAAAGACAGGAGATGCTATCTGTTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: DGRNRRKRILLW*WEKTGDAICSG Trigger: CCCTGAACAGATAGCATCTCCTGTCTTTTCCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATCACCCAGCCCCAGCTaGCCCACGTCGCCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPASPSPS*PTSPWP Trigger: GGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGA...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTTCACCCAGCCCCAGCTaGCCCACGTCGCCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMASPSPS*PTSPWP Trigger: GGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGA...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGGTACACGGCCCAGCTaGCCTTGCTCCCCACAACCC | + |
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Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPAGTRPS*PCSPQP Trigger: GGGTTGTGGGGAGCAAGGTCAGCTGGGCCGTGTACC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCCACAGAAGGCATCCTaGAACCGCACACGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAPQKAS*NRTRPR Trigger: CCGGGGCCGTGTGCGGTTCCAGGATGCCTTCTGTGG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR TCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCACGGCCGTCTTCGGTaGGGGCTGCTGTGTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAHGRLR*GLLCDC Trigger: ACAGTCACACAGCAGCCCTCACCGAAGACGGCCGTG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCCCCCGGCCTCAGCCTaGACAACATCCTGCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAPPASA*TTSCRR Trigger: CCTTCTGCAGGATGTTGTGCAGGCTGAGGCCGGGGG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTGGCCCCGGGTCCCCCTaGATTTCAGCAGCACACATC | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAGPGSP*ISAAHI Trigger: GATGTGTGCTGCTGAAATCCAGGGGGACCCGGGGCC...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPACPAGS*CPCPRQ Trigger: TTGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTGTGAGCATCACCAAGTaGTCGTTCCCCGAGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAVSITK*SFPEAT Trigger: GGTGGCCTCGGGGAACGACCACTTGGTGATGCTCAC...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATCAGCAGCACACATCTaGGGACCAGGAGTCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPASAAHI*GPGVAQ Trigger: TTGGGCGACTCCTGGTCCCCAGATGTGTGCTGCTGA...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTTGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMACPAGS*CPCPRQ Trigger: TTGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGGCATCTTCTGGGGGTaGCCTTCTCTTAGCTATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPAGIFWG*PSLSYA Trigger: CGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGGTACACGGCCCAGCTaGCCTTGCTCCCCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEGTRPS*PCSPQP Trigger: GGGTTGTGGGGAGCAAGGTCAGCTGGGCCGTGTACC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCCAAAGCCATACACGTaGCCCTCTCGGGAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAPKPYT*PSREMA Trigger: TGCCATCTCCCGAGAGGGCCACGTGTATGGCTTTGG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGCAAGATCCAGTGCCTaGAGTCCCGAGCTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPAARSSA*SPELVI Trigger: TATCACCAGCTCGGGACTCCAGGCACTGGATCTTGC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGTGCTGGCCCCCACTaGACACAGTTAACACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPACAGPH*TQLTPH Trigger: GTGTGGTGTTAACTGTGTCCAGTGGGGGCCAGCACA...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGTGAGGGCTGCTGTGTaGCTGTCCCCCGCTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEVRAAV*LSPADT Trigger: AGTGTCAGCGGGGGACAGTCACACAGCAGCCCTCAC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACACGGCCGTCTTCGGTaGGGGCTGCTGTGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEHGRLR*GLLCDC Trigger: ACAGTCACACAGCAGCCCTCACCGAAGACGGCCGTG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACCCCCGGCCTCAGCCTaGACAACATCCTGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEPPASA*TTSCRR Trigger: CCTTCTGCAGGATGTTGTGCAGGCTGAGGCCGGGGG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATCCCCCGCTGACACTTaGACCACTTTCTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPASPADT*TTFSCS Trigger: ACTGCAAGAGAAAGTGGTGCAAGTGTCAGCGGGGGA...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGTCTTCGGTGAGGGCTaGTGTGTGACTGTCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEVFGEG*CVTVPR Trigger: GCGGGGGACAGTCACACAGCAGCCCTCACCGAAGAC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGGCCCCGGGTCCCCCTaGATTTCAGCAGCACACATC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEGPGSP*ISAAHI Trigger: GATGTGTGCTGCTGAAATCCAGGGGGACCCGGGGCC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| 3UTR CAA 72 bp | ACAACTCCCACCCCTTTCCCAATACCCTGCCTTGCCTaGACTGCCCAGCCGAGCCCAGCATGGCTATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTPTPFPIPCLA*TAQPSPAWLSS Trigger: ACTGGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGGAGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTGGGAGATGGCAAAAGTaGAATAGGCGCCACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAGRWQK*NRRHRR Trigger: CCTTCTGTGGCGCCTATTTCACTTTTGCCATCTCCC...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACGGGCAGCCGGGAAATaGGGGTGGGTATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGERAAGK*GWVCSS Trigger: AGAAGAGCATACCCACCCTCATTTCCCGGCTGCCCG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTTCCCTTCCGAATCCATaGAGACTGTGTGATGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMASLPNP*RLCDAG Trigger: GCCAGCATCACACAGTCTGCATGGATTCGGAAGGGA...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACTTCATCCTGCCCGGTaGCCAGCTGGTAGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGELHPAR*PAGSWC Trigger: GCACCAACTACCAGCTGGGCACCGGGCAGGATGAAG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGGTACACGGCCCAGCTaGCCTTGCTCCCCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKGTRPS*PCSPQP Trigger: GGGTTGTGGGGAGCAAGGTCAGCTGGGCCGTGTACC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAATCAGCAGCACACATCTaGGGACCAGGAGTCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGESAAHI*GPGVAQ Trigger: TTGGGCGACTCCTGGTCCCCAGATGTGTGCTGCTGA...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAACCACAGAAGGCATCCTaGAACCGCACACGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKPQKAS*NRTRPR Trigger: CCGGGGCCGTGTGCGGTTCCAGGATGCCTTCTGTGG...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACCAAAGCCATACACGTaGCCCTCTCGGGAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEPKPYT*PSREMA Trigger: TGCCATCTCCCGAGAGGGCCACGTGTATGGCTTTGG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCCTGGTTCTGTGTTGTaGGACCTGTGTGAGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAPGSVL*DLCETF Trigger: GAAAGTCTCACACAGGTCCCACAACACAGAACCAGG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGTGAGGGCTGCTGTGTaGCTGTCCCCCGCTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKVRAAV*LSPADT Trigger: AGTGTCAGCGGGGGACAGTCACACAGCAGCCCTCAC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGTCTTCGGTGAGGGCTaGTGTGTGACTGTCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKVFGEG*CVTVPR Trigger: GCGGGGGACAGTCACACAGCAGCCCTCACCGAAGAC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGGCCCCGGGTCCCCCTaGATTTCAGCAGCACACATC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKGPGSP*ISAAHI Trigger: GATGTGTGCTGCTGAAATCCAGGGGGACCCGGGGCC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGCAAGATCCAGTGCCTaGAGTCCCGAGCTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEARSSA*SPELVI Trigger: TATCACCAGCTCGGGACTCCAGGCACTGGATCTTGC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTAAACACGACCATCCTTaGACACAGCATAACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAKHDHP*TQHNPQ Trigger: CTGTGGGTTATGCTGTGTCCAAGGATGGTCGTGTTT...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGGGAGATGGCAAAAGTaGAATAGGCGCCACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEGRWQK*NRRHRR Trigger: CCTTCTGTGGCGCCTATTTCACTTTTGCCATCTCCC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAACGGGCAGCCGGGAAATaGGGGTGGGTATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKRAAGK*GWVCSS Trigger: AGAAGAGCATACCCACCCTCATTTCCCGGCTGCCCG...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGACACACAGTATGCATaGCCCCGGCCTCAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKDTQYA*PRPQPA Trigger: TGCAGGCTGAGGCCGGGGGCATGCATACTGTGTGTC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAATCCCCCGCTGACACTTaGACCACTTTCTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGESPADT*TTFSCS Trigger: ACTGCAAGAGAAAGTGGTGCAAGTGTCAGCGGGGGA...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAATCCCTTCCGAATCCATaGAGACTGTGTGATGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGESLPNP*RLCDAG Trigger: GCCAGCATCACACAGTCTGCATGGATTCGGAAGGGA...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAACTTCATCCTGCCCGGTaGCCAGCTGGTAGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKLHPAR*PAGSWC Trigger: GCACCAACTACCAGCTGGGCACCGGGCAGGATGAAG...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACCTGGTTCTGTGTTGTaGGACCTGTGTGAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEPGSVL*DLCETW Trigger: CCAAGTCTCACACAGGTCCCACAACACAGAACCAGG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030726.13 |
||
| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGTGAGCATCACCAAGTaGTCGTTCCCCGAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKVSITK*SFPEAT Trigger: GGTGGCCTCGGGGAACGACCACTTGGTGATGCTCAC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAACTTGGTGGAATTCTTaGAGGATGTCAAGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPFPIPCLALTAQPSPATWWNS*RMSSFE Trigger: CTCAAAACTTGACATCCTTCAAGAATTCCACCAAGT...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACCATGCTCTTCTTCATaGGCTCCAACAACCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEPCSSS*APTTRS Trigger: TGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGCCACAGAAGGCATCCTaGAACCGCACACGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGPQKAS*NRTRPR Trigger: CCGGGGCCGTGTGCGGTTCCAGGATGCCTTCTGTGG...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAACCAAAGCCATACACGTaGCCCTCTCGGGAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKPKPYT*PSREMA Trigger: TGCCATCTCCCGAGAGGGCCACGTGTATGGCTTTGG...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAACCTGGTTCTGTGTTGTaGGACCTGTGTGAGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGEPGSVL*DLCETF Trigger: GAAAGTCTCACACAGGTCCCACAACACAGAACCAGG...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGGCATCTTCTGGGGGTaGCCTTCTCTTAGCTATGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKGIFWG*PSLSYA Trigger: CGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGCACGGCCGTCTTCGGTaGGGGCTGCTGTGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGHGRLR*GLLCDC Trigger: ACAGTCACACAGCAGCCCTCACCGAAGACGGCCGTG...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR GCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGGTCTTCGGTGAGGGCTaGTGTGTGACTGTCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGVFGEG*CVTVPR Trigger: GCGGGGGACAGTCACACAGCAGCCCTCACCGAAGAC...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGCAAGATCCAGTGCCTaGAGTCCCGAGCTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKARSSA*SPELVI Trigger: TATCACCAGCTCGGGACTCCAGGCACTGGATCTTGC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAATGTGCTGGCCCCCACTaGACACAGTTAACACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKCAGPH*TQLTPH Trigger: GTGTGGTGTTAACTGTGTCCAGTGGGGGCCAGCACA...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAATCAAGTTTTGAGGAATaGAGCAAGATCCAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGESSFEE*SKIQCL Trigger: CAGGCACTGGATCTTGCTTCATTCCTCAAAACTTGA...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGCGGGCAGCCGGGAAATaGGGGTGGGTATGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGRAAGK*GWVCSS Trigger: AGAAGAGCATACCCACCCTCATTTCCCGGCTGCCCG...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR GCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGGACACACAGTATGCATaGCCCCGGCCTCAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGDTQYA*PRPQPA Trigger: TGCAGGCTGAGGCCGGGGGCATGCATACTGTGTGTC...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGTGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGCPAGS*CPCPRQ Trigger: TTGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAATGCACCACTTTCTCTTaGAGTTCCACTTTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKCTTFS*SSTFPG Trigger: CCCTGGGAAAGTGGAACTGCAAGAGAAAGTGGTGCA...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGGGCATCTTCTGGGGGTaGCCTTCTCTTAGCTATGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGGIFWG*PSLSYA Trigger: CGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCC...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR TCA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAACTTGGTGGAATTCTTaGAGGATGTCAAGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRAQHGYPVLYGRKADGETWWNS*RMSSFE Trigger: CTCAAAACTTGACATCCTTCAAGAATTCCACCAAGT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGGACCTGTGTGAGACTTaGCACGAGCGAGTAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGDLCET*HERVAG Trigger: TCCTGCTACTCGCTCGTGCCAAGTCTCACACAGGTC...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030726.13 |
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| CDS-3UTR CCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAAAACACGACCATCCTTaGACACAGCATAACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKKHDHP*TQHNPQ Trigger: CTGTGGGTTATGCTGTGTCCAAGGATGGTCGTGTTT...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGAGTAAGACCGTGTGCTaGCCCCCACTGGACACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGSKTVC*PPLDTV Trigger: AACTGTGTCCAGTGGGGGCCAGCACACGGTCTTACT...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAATCAAGTTTTGAGGAATaGAGCAAGATCCAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKSSFEE*SKIQCL Trigger: CAGGCACTGGATCTTGCTTCATTCCTCAAAACTTGA...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGCGAGCTGGTGATAGTTaGAGAGGCCAAAGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGRAGDS*RGQSHT Trigger: TGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCG...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAACTTGGTGGAATTCTTaGAGGATGTCAAGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQGFTESQLFRVWAAKTWWNS*RMSSFE Trigger: CTCAAAACTTGACATCCTTCAAGAATTCCACCAAGT...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGAAACACGACCATCCTTaGACACAGCATAACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGKHDHP*TQHNPQ Trigger: CTGTGGGTTATGCTGTGTCCAAGGATGGTCGTGTTT...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGTCAAGTTTTGAGGAATaGAGCAAGATCCAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRTDETEEKGFCCGDGSSFEE*SKIQCL Trigger: CAGGCACTGGATCTTGCTTCATTCCTCAAAACTTGA...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| 3UTR CAA 72 bp | TTAGAGTCAAATATTTGGCTTAGATCACTCAGAGCCTaGAAAAGCCTTTGTCCAGATCTCCCCAGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LESNIWLRSLRA*KSLCPDLPRHG Trigger: CCCATGCCTGGGGAGATCTGGACAAAGGCTTTTCAAGGCTCTGAGTGATCTAAGCCAAATATTTGACTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS-3UTR CAA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAACGGCCCAGCTGACCTaGCTCCCCACAACCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PTPFPIPCLALTAQPSPATAQLT*LPTTQG Trigger: ACCTTGGGTTGTGGGGAGCAAGGTCAGCTGGGCCGT...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTACGGCCCAGCTGACCTaGCTCCCCACAACCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PFPNTLPCLDCPAEPSMATAQLT*LPTTQG Trigger: ACCTTGGGTTGTGGGGAGCAAGGTCAGCTGGGCCGT...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS TCA 90 bp | AGAGGCCAAAGCCATACACGTGGCCCTCTCGGGAGATGGCAAAAGTaGAATAGGCGCCACAGAAGGCATCCTGGAACCGCACACGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGQSHTRGPLGRWQK*NRRHRRHPGTAHGP Trigger: GGGGCCGTGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACTTTTGCCATCTCCCGAGAGGGCCACGTGTATGGCTTTGGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS GCA 90 bp | AGACACACAGTATGCATGCCCCCGGCCTCAGCCTGCACAACATCCTaGAGAAGGGGCACCAAGGCCGGCTTCTTCCTCTCCAGCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: RHTVCMPPASACTTS*RRGTKAGFFLSSTL Trigger: AAGTGTGCTGGAGAGGAAGAAGCCGGCCTTGGTGCCCCTTCTGCAGGATGTTGTGCAGGCTGAGGCCGGGGGCATGCATACTGTGTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 ENSMUST00000155129.2 |
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| CDS-3UTR CAA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCAGTAGACCTGGCCACTTaGGCTCAGACACACAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: PTPFPIPCLALTAQPSPAVDLAT*AQTHSM Trigger: CATACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTAC...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCACCGATCACACCATTATaGTCCCGGAAAGAGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTPFPIPCLALTAQPSPAPITPL*SRKEPQ Trigger: TTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGG...TGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAACGGCCCAGCTGACCTaGCTCCCCACAACCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRAQHGYPVLYGRKADGETAQLT*LPTTQG Trigger: ACCTTGGGTTGTGGGGAGCAAGGTCAGCTGGGCCGT...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS TCA 90 bp | ACCATCCTTGGACACAGCATAACCCACAGAAGCCCCACAGGCCACTaGGGAGACCACGGGCAGCCGGGAAATGAGGGTGGGTATGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TILGHSITHRSPTGH*GDHGQPGNEGGYAL Trigger: AAGAGCATACCCACCCTCATTTCCCGGCTGCCCGTGGTCTCCTCAGTGGCCTGTGGGGCTTCTGTGGGTTATGCTGTGTCCAAGGATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTCCGATCACACCATTATaGTCCCGGAAAGAGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAPITPL*SRKEPQ Trigger: TTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGG...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTTCCCAATACCCTGCCTTGCCTTGACTGCCCAGCCGAGCCCAGCATGGCTAAGCCTACCCAGGACTaGGTGGAATTCTTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PFPNTLPCLDCPAEPSMAKPTQD*VEFLKD Trigger: ATCCTTCAAGAATTCCACCAAGTCCTGGGTAGGCTT...AGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAAGGCAGGGTATTGGGAAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGTAGACCTGGCCACTTaGGCTCAGACACACAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SRAQHGYPVLYGRKADGEVDLAT*AQTHSM Trigger: CATACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTAC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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| CDS CCA 90 bp | CGGGCGCATCCAGCTGCACTTGAACAGGTACCATGCTCTTCTTCATaGGCTCCAACAACCCGATCACACCATTATTGTCCCGGAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHPAALEQVPCSSS*APTTRSHHYCPGKS Trigger: GCTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTACCTGTTCAAGTGCAGCTGGATGCGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | AGCCGAGCCCAGCATGGCTATCCAGTCCTCTATGGCAGAAAGGCTGATGGGGAAGAAGGATGTCAAGTTTaGAGGAATGAAGCAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAQHGYPVLYGRKADGEEGCQV*RNEARS Trigger: GGATCTTGCTTCATTCCTCAAAACTTGACATCCTTC...TTCCCCATCAGCCTTTCTGCCATAGAGGACTGGATAGCCATGCTGGGCTCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAAAGCCTACCCAGGACTaGGTGGAATTCTTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGKQGFTESQLFRVWAAKKPTQD*VEFLKD Trigger: ATCCTTCAAGAATTCCACCAAGTCCTGGGTAGGCTT...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGAAAGAGGACGGACGAAACAGAAGAAAAAGGATTCTGCTGTGGTGATGGGGTAGACCTGGCCACTTaGGCTCAGACACACAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SRKRTDETEEKGFCCGDGVDLAT*AQTHSM Trigger: CATACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTAC...CCCATCACCACAGCAGAATCCTTTTTCTTCTGTTTCGTCCGTCCTCTTTCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGTAAGCAGGGCTTCACAGAGTCCCAACTTTTCAGAGTCTGGGCAGCAAAAGAAGGATGTCAAGTTTaGAGGAATGAAGCAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKQGFTESQLFRVWAAKEGCQV*RNEARS Trigger: GGATCTTGCTTCATTCCTCAAAACTTGACATCCTTC...TTTTGCTGCCCAGACTCTGAAAAGTTGGGACTCTGTGAAGCCCTGCTTACCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS TCA 72 bp | GGACACAGCATAACCCACAGAAGCCCCACAGGCCACTaGGGAGACCACGGGCAGCCGGGAAATGAGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHSITHRSPTGH*GDHGQPGNEGG Trigger: CCCACCCTCATTTCCCGGCTGCCCGTGGTCTCCTCAGTGGCCTGTGGGGCTTCTGTGGGTTATGCTGTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS TCA 72 bp | AGGAAGACACGGCCGTCTTCGGTGAGGGCTGCTGTGTaGCTGTCCCCCGCTGACACTTGCACCACTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RKTRPSSVRAAV*LSPADTCTTFS Trigger: AGAGAAAGTGGTGCAAGTGTCAGCGGGGGACAGTCACACAGCAGCCCTCACCGAAGACGGCCGTGTCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS TCA 72 bp | AGCACACATCTGGGGACCAGGAGTCGCCCAAGGCCCTaGCGGCCACCTCGGTTGGCAAATAATTCAGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: STHLGTRSRPRP*RPPRLANNSGT Trigger: TGTACCTGAATTATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGGGCGACTCCTGGTCCCCAGATGTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS TCA 72 bp | GAGGCCACCTTTACCACGGGCGCATCCAGCTGCACTTaGACAGGTACCATGCTCTTCTTCATGGGCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: EATFTTGASSCT*TGTMLFFMGSN Trigger: GTTGGAGCCCATGAAGAAGAGCATGGTACCTGTTCAAGTGCAGCTGGATGCGCCCGTGGTAAAGGTGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS TCA 72 bp | AGCCATACACGTGGCCCTCTCGGGAGATGGCAAAAGTaGAATAGGCGCCACAGAAGGCATCCTGGAACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHTRGPLGRWQK*NRRHRRHPGTA Trigger: TGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACTTTTGCCATCTCCCGAGAGGGCCACGTGTATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
||
| CDS CCA 72 bp | CTCTGTGCCTGGTCCTTAACTAGTAAGACCGTGTGCTaGCCCCCACTGGACACAGTTAACACCACACGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCAWSLTSKTVC*PPLDTVNTTRF Trigger: GAACCGTGTGGTGTTAACTGTGTCCAGTGGGGGCCAGCACACGGTCTTACTAGTTAAGGACCAGGCACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030726.13 ENSMUST00000084250.11 ENSMUST00000105951.8 |
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