Pregenerated sensors for RCBTB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035469

Ensembl transcript IDs: ENSMUST00000022551.14, ENSMUST00000043227.13, ENSMUST00000142326.2, ENSMUST00000172810.2, ENSMUST00000173547.8, ENSMUST00000174009.8, ENSMUST00000174830.2

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	CTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTaGCCCAGAGCTCTCACACCTAGCCCAGCAGCCTTGGCTTCAGTT	+
Preference number: 1 (lower is better) Translates to: LSMVWGFTCRSPHPQ*PRALTPSPAALASV Trigger: AACTGAAGCCAAGGCTGCTGGGCTAGGTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR GCA 90 bp	CTGGGGTCAACTGGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCATACACCTCACCACTGTCCAGAACAG	+
Preference number: 1 (lower is better) Translates to: LGSTGCHCFPSPAVH*HCSPSHTPHHCPEQ Trigger: CTGTTCTGGACAGTGGTGAGGTGTATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR CCA 90 bp	GACAATCTGGTTCACACACATGCCGTGCAGAGCCGCCACTCTCACTaGGGTCAACTGGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATT	+
Preference number: 1 (lower is better) Translates to: DNLVHTHAVQSRHSH*GQLVAIVSQAQLSI Trigger: AATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAACCAGATTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR TCA 90 bp	CAGCCATACACCTCACCACTGTCCAGAACAGCCATGGATGAGGTCTaGCCACAGGCAATGTTGACCACTCTCTTGGTATGTAAACAGTTT	+
Preference number: 1 (lower is better) Translates to: QPYTSPLSRTAMDEV*PQAMLTTLLVCKQF Trigger: AAACTGTTTACATACCAAGAGAGTGGTCAACATTGCCTGTGGTCAGACCTCATCCATGGCTGTTCTGGACAGTGGTGAGGTGTATGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR GCA 90 bp	GAGGTTCTACAGAAGGTCCATTCACTACAGCAGTTCAGATTAATGTaGACTCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGT	+
Preference number: 1 (lower is better) Translates to: EVLQKVHSLQQFRLM*THHLGQENCHLGGS Trigger: ACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGAGTGCACATTAATCTGAACTGCTGTAGTGAATGGACCTTCTGTAGAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR TCA 90 bp	AATGAAAAGGCGTTCTCCACAGTAATTCCTCGCTTGATGATGTGCTaGCAAAGCCTCTTCAGTCTGTTCTCACAGTACGACGTTGCCAAG	+
Preference number: 1 (lower is better) Translates to: NEKAFSTVIPRLMMC*QSLFSLFSQYDVAK Trigger: CTTGGCAACGTCGTACTGTGAGAACAGACTGAAGAGGCTTTGTCAGCACATCATCAAGCGAGGAATTACTGTGGAGAACGCCTTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR GCA 90 bp	AGTAATAAGAGCCTTTACCTGCTGAGCCATCTTTCCAGCCCTAGGTaGCTGTCCCTTAAGAGCATCTCAGCAAACCTAGTATTTCTTGAC	+
Preference number: 1 (lower is better) Translates to: SNKSLYLLSHLSSPR*LSLKSISANLVFLD Trigger: GTCAAGAAATACTAGGTTTGCTGAGATGCTCTTAAGGGACAGGCACCTAGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCTTATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CCA 90 bp	ACTGTCTACGGGTGTGGATTTGCAGGTGTAATTTGTGCTTTTTCGTaGGTAAGTTTTTCAAGTAAGACCACCAGTAAATGTTCTAAAGTT	+
Preference number: 1 (lower is better) Translates to: TVYGCGFAGVICAFS*VSFSSKTTSKCSKV Trigger: AACTTTAGAACATTTACTGGTGGTCTTACTTGAAAAACTTACCCACGAAAAAGCACAAATTACACCTGCAAATCCACACCCGTAGACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
3UTR-3UTR TCA 90 bp	GGTTCACACACATGCCGTGCAGAGCCGCCACTCTCACTGGGGTCAACTGGTTGCGCCATGGATGAGGTCTaGCCACAGGCAATGTTGACC	+
Preference number: 2 (lower is better) Translates to: GSHTCRAEPPLSLGSTGCAMDEV*PQAMLT Trigger: GGTCAACATTGCCTGTGGTCAGACCTCATCCATGGC...GCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CCA 90 bp	ACACATGCCGTGCAGAGCCGCCACTCTCACTGGGGTCAACTGGTTGCCATTGTTGCCCGCCTTGTGTCTTaGCAGCAGATGTGTGGGTGG	+
Preference number: 2 (lower is better) Translates to: THAVQSRHSHWGQLVAIVARLVS*QQMCGW Trigger: CCACCCACACATCTGCTGCCAAGACACAAGGCGGGC...AACAATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCATGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	AAAAGTCTTCATGCTCTACAGACAGGAGGCGCCATGAGACAGCCGGGGTGCCAATGCAGCAGAAGTGGGTaGGGTGCGGAAGGATCACCG	+
Preference number: 2 (lower is better) Translates to: KSLHALQTGGAMRQPGCQCSRSG*GAEGSP Trigger: CGGTGATCCTTCCGCACCTCACCCACTTCTGCTGCA...TTGGCACCCCGGCTGTCTCATGGCGCCTCCTGTCTGTAGAGCATGAAGACTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	GTCCATTGCCATTGTAGCCCCAGCCATACACCTCACCACTGTCCAGAACAGCCATGCAGCAGAAGTGGGTaGGGTGCGGAAGGATCACCG	+
Preference number: 2 (lower is better) Translates to: VHCHCSPSHTPHHCPEQPCSRSG*GAEGSP Trigger: CGGTGATCCTTCCGCACCTCACCCACTTCTGCTGCA...TGGCTGTTCTGGACAGTGGTGAGGTGTATGGCTGGGGCTACAATGGCAATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CCA 90 bp	AAAAGTCTTCATGCTCTACAGACAGGAGGCGCCATGAGACAGCCGGGGTGCCAACAGCAGATGTGTGGGTaGAGTGGCAAGCTGCAATCT	+
Preference number: 2 (lower is better) Translates to: KSLHALQTGGAMRQPGCQQQMCG*SGKLQS Trigger: AGATTGCAGCTTGCCACTCCACCCACACATCTGCTG...TTGGCACCCCGGCTGTCTCATGGCGCCTCCTGTCTGTAGAGCATGAAGACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	AAAAGTCTTCATGCTCTACAGACAGGAGGCGCCATGAGACAGCCGGGGTGCCAATTCCGAGGAGTTGGCTaGTTGGCTGTAGATCCTGAT	+
Preference number: 2 (lower is better) Translates to: KSLHALQTGGAMRQPGCQFRGVG*LAVDPD Trigger: ATCAGGATCTACAGCCAATCAGCCAACTCCTCGGAA...TTGGCACCCCGGCTGTCTCATGGCGCCTCCTGTCTGTAGAGCATGAAGACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR GCA 90 bp	GTCATCAGGCTTAGTAATAAGAGCCTTTACCTGCTGAGCCATCTTTCCAGCCCTTCACCGCACCCACAGTaGCCCAGAGCTCTCACACCT	+
Preference number: 2 (lower is better) Translates to: VIRLSNKSLYLLSHLSSPSPHPQ*PRALTP Trigger: AGGTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGA...AGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCTTATTACTAAGCCTGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR TCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACAGACCCCCACAGTGCTaGTGCCCCCACAGGAGGTTG	+
Preference number: 2 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHRPPQC*CPHRRL Trigger: CAACCTCCTGTGGGGGCATCAGCACTGTGGGGGTCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR TCA 90 bp	GCAATGAACTCCTTTAGCAGGGGACCATCCATTTGCCAGAACGCAGCCGTCTGGGACCACAGGCAATGTTaGCCACTCTCTTGGTATGTA	+
Preference number: 2 (lower is better) Translates to: AMNSFSRGPSICQNAAVWDHRQC*PLSWYV Trigger: TACATACCAAGAGAGTGGTCAACATTGCCTGTGGTC...CCAGACGGCTGCGTTCTGGCAAATGGATGGTCCCCTGCTAAAGGAGTTCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	ATGAACTCCTTTAGCAGGGGACCATCCATTTGCCAGAACGCAGCCGTCTGGGTACCTCTGCGTCATATCTaGCTGCAGCAGAGAACAATG	+
Preference number: 2 (lower is better) Translates to: MNSFSRGPSICQNAAVWVPLRHI*LQQRTM Trigger: CATTGTTCTCTGCTGCAGTCAGATATGACGCAGAGG...TACCCAGACGGCTGCGTTCTGGCAAATGGATGGTCCCCTGCTAAAGGAGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR GCA 90 bp	ACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCACCGCACCCACAGTaGCCCAGAGCTCTCACACCT	+
Preference number: 2 (lower is better) Translates to: THTHTHKNTLAVQQAKSVSPHPQ*PRALTP Trigger: AGGTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGA...CACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR GCA 90 bp	TCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCACTTACCCATGTCAACACACATGCCTaGCTGTCTTTGGTGCCTCAG	+
Preference number: 2 (lower is better) Translates to: SSSWPGKLPPRRQLSLTHVNTHA*LSLVPQ Trigger: CTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGAC...ATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR GCA 90 bp	CACTTCCTTCATATCCTCATTCCAATAAGACTGAAACATGGACCGAAAGTGCTCTCACCGCACCCACAGTaGCCCAGAGCTCTCACACCT	+
Preference number: 2 (lower is better) Translates to: HFLHILIPIRLKHGPKVLSPHPQ*PRALTP Trigger: AGGTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGA...GAGCACTTTCGGTCCATGTTTCAGTCTTATTGGAATGAGGATATGAAGGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACAGAGCCTTTACCTGCTaGGCCATCTTTCCAGCCCTA	+
Preference number: 2 (lower is better) Translates to: SYIPTEHCLWCGALPADHRAFTC*AIFPAL Trigger: TAGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCT...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR TCA 90 bp	GGGACAACTTATAAGTCAGCTCTCTCCACCATGTGGATTCTGGGGATTCAAGTTAGAGCCTTTACCTGCTaGGCCATCTTTCCAGCCCTA	+
Preference number: 2 (lower is better) Translates to: GTTYKSALSTMWILGIQVRAFTC*AIFPAL Trigger: TAGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCT...AACTTGAATCCCCAGAATCCACATGGTGGAGAGAGCTGACTTATAAGTTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR TCA 90 bp	CTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTCTAAGTCTACAGGACTaGGGTTCTACAGAAGGTCCA	+
Preference number: 2 (lower is better) Translates to: LQLDQELSTFLSGELSTGLSLQD*GSTEGP Trigger: TGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAG...ACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
3UTR-3UTR GCA 90 bp	TCTGCGTCATATCTGACTGCAGCAGAGAACAATGAAAAGGCGTTCTCCACAGTACTGGGGTCAACTGGTTaGCATTGTTTCCCAAGCCCA	+
Preference number: 2 (lower is better) Translates to: SASYLTAAENNEKAFSTVLGSTG*HCFPSP Trigger: TGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAG...TACTGTGGAGAACGCCTTTTCATTGTTCTCTGCTGCAGTCAGATATGACGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CCA 90 bp	TCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCACTTACCCATAGTTTTGATGGATTTTaGCCTGGACTCCTCCCACCA	+
Preference number: 2 (lower is better) Translates to: SSSWPGKLPPRRQLSLTHSFDGF*PGLLPP Trigger: TGGTGGGAGGAGTCCAGGCCAAAATCCATCAAAACT...ATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	GGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCTTTATGGACATGAATATAGCCCGCCTTGTGTCTTaGCAGCAGATGTGTGGGTGG	+
Preference number: 2 (lower is better) Translates to: GPKVLTPDFQNSFMDMNIARLVS*QQMCGW Trigger: CCACCCACACATCTGCTGCCAAGACACAAGGCGGGC...TATATTCATGTCCATAAAGCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACGCAAGCCCTCATCTGTaGGTGCTAGTGTATGTGCAT	+
Preference number: 2 (lower is better) Translates to: SYIPTEHCLWCGALPADHASPHL*VLVYVH Trigger: ATGCACATACACTAGCACTCACAGATGAGGGCTTGC...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR GCA 90 bp	GGAACCCTAATTTTTGTAACACTCTCCTCTCCAAGCAAAGCTCTTTTACCATCATGGGCAGGGCCTGTCTaGCACAGACCATGTGGAAAG	+
Preference number: 2 (lower is better) Translates to: GTLIFVTLSSPSKALLPSWAGPV*HRPCGK Trigger: CTTTCCACATGGTCTGTGGCAGACAGGCCCTGCCCA...TGATGGTAAAAGAGCTTTGCTTGGAGAGGAGAGTGTTACAAAAATTAGGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR GCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAGTCAACACACATGCCTaGCTGTCTTTGGTGCCTCAG	+
Preference number: 2 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGVNTHA*LSLVPQ Trigger: CTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGAC...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	CTCATTCCAATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGATTTTCAGTTGGCAGCAGATGTGTaGGTGGAGTGGCAAGCTGCA	+
Preference number: 2 (lower is better) Translates to: LIPIRLKHGPKVLTPDFQLAADV*VEWQAA Trigger: TGCAGCTTGCCACTCCACCCACACATCTGCTGCCAA...CTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGGAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR-3UTR CCA 90 bp	CCAATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCTGTCCAGAACAGCCATaGATGAGGTCTGACCACAGG	+
Preference number: 2 (lower is better) Translates to: PIRLKHGPKVLTPDFQNSCPEQP*MRSDHR Trigger: CCTGTGGTCAGACCTCATCCATGGCTGTTCTGGACA...GCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR CAA 90 bp	CCAGGCAACAGCTGTAACATGATCAGGAAGAGGGGCTTTGAGCTCTaGTTCCTATTTATCTTGTTTGTCAACACACATGCCTGCCTGTCT	+
Preference number: 2 (lower is better) Translates to: PGNSCNMIRKRGFEL*FLFILFVNTHACLS Trigger: AGACAGGCAGGCATGTGTGTTGACAAACAAGATAAATAGGAACAAGAGCTCAAAGCCCCTCTTCCTGATCATGTTACAGCTGTTGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR GCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACGTTTGTCAACACACATaGCTGCCTGTCTTTGGTGCC	+
Preference number: 2 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHVCQHT*LPVFGA Trigger: GGCACCAAAGACAGGCAGGCATGTGTGTTGACAAAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACGCACTGTTGGATAATTaGGGTGCGGGGAACCCTAAT	+
Preference number: 2 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHALLDN*GAGNPN Trigger: ATTAGGGTTCCCCGCACCCCAATTATCCAACAGTGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACGTGCACTCATCATCTTaGCCAGGAAAACTGCCACCT	+
Preference number: 2 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHVHSSS*PGKLPP Trigger: AGGTGGCAGTTTTCCTGGCCAAGATGATGAGTGCAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CAA 90 bp	AACATGATCAGGAAGAGGGGCTTTGAGCTCTTGTTCCTATTTATCTaGTTTGTCAACACACATGCCTGCCTGTCTTTGGTGCCTCAGTCA	+
Preference number: 2 (lower is better) Translates to: NMIRKRGFELLFLFI*FVNTHACLSLVPQS Trigger: TGACTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATAAATAGGAACAAGAGCTCAAAGCCCCTCTTCCTGATCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR TCA 90 bp	AGGTTATTTTTACTTCCAGTTCCCAGCTGCCCATATGTGTTAGCTCCCCAGGCAAGCCATCGAATGATGTaGACCACAAGCTACTTCAAT	+
Preference number: 2 (lower is better) Translates to: RLFLLPVPSCPYVLAPQASHRMM*TTSYFN Trigger: ATTGAAGTAGCTTGTGGTTCACATCATTCGATGGCT...TGCCTGGGGAGCTAACACATATGGGCAGCTGGGAACTGGAAGTAAAAATAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR GCA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCAGGGGGATGGTAGTGTaGACGCTGGTCTCAAACACA	+
Preference number: 2 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLRGMVV*TLVSNT Trigger: TGTGTTTGAGACCAGCGTGCACACTACCATCCCCCT...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAAGTTTTGATGGATTTTaGCCTGGACTCCTCCCACCA	+
Preference number: 2 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGSFDGF*PGLLPP Trigger: TGGTGGGAGGAGTCCAGGCCAAAATCCATCAAAACT...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	CACTTCCTTCATATCCTCATTCCAATAAGACTGAAACATGGACCGAAAGTGCTCCTCACTGGGGTCAACTaGTTGCCATTGTTTCCCAAG	+
Preference number: 2 (lower is better) Translates to: HFLHILIPIRLKHGPKVLLTGVN*LPLFPK Trigger: CTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAG...GAGCACTTTCGGTCCATGTTTCAGTCTTATTGGAATGAGGATATGAAGGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACAGTCACCATCCACCCTaGCCTAGTATTTTACAAATG	+
Preference number: 2 (lower is better) Translates to: SYIPTEHCLWCGALPADHSHHPP*PSILQM Trigger: CATTTGTAAAATACTAGGCCAGGGTGGATGGTGACT...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR TCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACATAGGGAGCCCTAGCTaGACGTATGACAAATGTATT	+
Preference number: 2 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHIGSPS*TYDKCI Trigger: AATACATTTGTCATACGTTCAGCTAGGGCTCCCTAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCTTAGTGAAGCACTGTTaGATAATTGGGGTGCGGGGA	+
Preference number: 2 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLLVKHC*IIGVRG Trigger: TCCCCGCACCCCAATTATCCAACAGTGCTTCACTAA...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAAACTGTCTACGGGTGTaGATTTGCAGGTGTAATTTG	+
Preference number: 2 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGNCLRV*ICRCNL Trigger: CAAATTACACCTGCAAATCCACACCCGTAGACAGTT...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
3UTR-3UTR TCA 90 bp	GGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCTTTATGGACATGAATATAGCTAAAGCCATCGAATaGTGTGAACCACAAGCTACT	+
Preference number: 2 (lower is better) Translates to: GPKVLTPDFQNSFMDMNIAKAIE*CEPQAT Trigger: AGTAGCTTGTGGTTCACATCATTCGATGGCTTTAGC...TATATTCATGTCCATAAAGCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	AAACTGGTCTATCTCTATCACTTCCTTCATATCCTCATTCCAATAAGACTGAAACAGAACAGCCATGGATaGGGTCTGACCACAGGCAAT	+
Preference number: 2 (lower is better) Translates to: KLVYLYHFLHILIPIRLKQNSHG*GLTTGN Trigger: ATTGCCTGTGGTCAGACCTCATCCATGGCTGTTCTG...TTTCAGTCTTATTGGAATGAGGATATGAAGGAAGTGATAGAGATAGACCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR TCA 90 bp	GGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCTTTATGGACATGAATATAAGCCATCGAATGATGTaGACCACAAGCTACTTCAAT	+
Preference number: 2 (lower is better) Translates to: GPKVLTPDFQNSFMDMNISHRMM*TTSYFN Trigger: ATTGAAGTAGCTTGTGGTTCACATCATTCGATGGCT...TATATTCATGTCCATAAAGCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR CAA 90 bp	TCTCCAAGCAAAGCTCTTTTACCATCAGCTTCTCATAGGTACTTCTaGTCACTTCTCTATAGGGACCTAAATCTTTTAGTTCTTCTTCTT	+
Preference number: 2 (lower is better) Translates to: SPSKALLPSASHRYF*SLLYRDLNLLVLLL Trigger: AAGAAGAAGAACTAAAAGATTTAGGTCCCTATAGAGAAGTGACAAGAAGTACCTATGAGAAGCTGATGGTAAAAGAGCTTTGCTTGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CCA 90 bp	AAACTGGTCTATCTCTATCACTTCCTTCATATCCTCATTCCAATAAGACTGAAACACCATGATTTGTGTTaGGCTCAGCAGGTTATTTTT	+
Preference number: 2 (lower is better) Translates to: KLVYLYHFLHILIPIRLKHHDLC*AQQVIF Trigger: AAAAATAACCTGCTGAGCCCAACACAAATCATGGTG...TTTCAGTCTTATTGGAATGAGGATATGAAGGAAGTGATAGAGATAGACCAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CCA 90 bp	CTGAAGTATAAAACTGGTTCCAGTAACTTCAAGGATACAGTTTGGGATCTTTTACAGAGTTGTAAGAAATaGACTCACAAGAAGCAAATA	+
Preference number: 2 (lower is better) Translates to: LKYKTGSSNFKDTVWDLLQSCKK*THKKQI Trigger: TATTTGCTTCTTGTGAGTCCATTTCTTACAACTCTG...TAAAAGATCCCAAACTGTATCCTTGAAGTTACTGGAACCAGTTTTATACTTCAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR GCA 72 bp	GTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTaGCCCAGAGCTCTCACACCTAGCCCAGCAGCCTTG	+
Preference number: 3 (lower is better) Translates to: VWGFTCRSPHPQ*PRALTPSPAAL Trigger: CAAGGCTGCTGGGCTAGGTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174009.8
3UTR GCA 72 bp	CGTGCAGAGCCGCCACTCTCACTGGGGTCAACTGGTTaGCATTGTTTCCCAAGCCCAGCTGTCCATTGCCAT	+
Preference number: 3 (lower is better) Translates to: RAEPPLSLGSTG*HCFPSPAVHCH Trigger: ATGGCAATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR CCA 72 bp	ATGCCGTGCAGAGCCGCCACTCTCACTGGGGTCAACTaGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATTG	+
Preference number: 3 (lower is better) Translates to: MPCRAATLTGVN*LPLFPKPSCPL Trigger: CAATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR CCA 72 bp	GTTCACACACATGCCGTGCAGAGCCGCCACTCTCACTaGGGTCAACTGGTTGCCATTGTTTCCCAAGCCCAG	+
Preference number: 3 (lower is better) Translates to: VHTHAVQSRHSH*GQLVAIVSQAQ Trigger: CTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR GCA 72 bp	ACTGGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCATACACCTCACCACTGT	+
Preference number: 3 (lower is better) Translates to: TGCHCFPSPAVH*HCSPSHTPHHC Trigger: ACAGTGGTGAGGTGTATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR TCA 72 bp	GCCATACACCTCACCACTGTCCAGAACAGCCATGGATaGGGTCTGACCACAGGCAATGTTGACCACTCTCTT	+
Preference number: 3 (lower is better) Translates to: AIHLTTVQNSHG*GLTTGNVDHSL Trigger: AAGAGAGTGGTCAACATTGCCTGTGGTCAGACCTCATCCATGGCTGTTCTGGACAGTGGTGAGGTGTATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR GCA 72 bp	TATGTGCATAACCACAGACAATCTGGTTCACACACATaGCGTGCAGAGCCGCCACTCTCACTGGGGTCAACT	+
Preference number: 3 (lower is better) Translates to: YVHNHRQSGSHT*RAEPPLSLGST Trigger: AGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAACCAGATTGTCTGTGGTTATGCACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CAA 90 bp	CCAATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCTGCCCGCCTTGTGTCTaGGCAGCAGATGTGTGGGTG	+
Preference number: 3 (lower is better) Translates to: PIRLKHGPKVLTPDFQNSCPPCV*AADVWV Trigger: CACCCACACATCTGCTGCCAAGACACAAGGCGGGCA...GCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
3UTR TCA 72 bp	AACTTTCCGAGGAGTTGGCTGATTGGCTGTAGATCCTaGTCCCACCTGACCACAGTTGTTATAGCCCCAAGC	+
Preference number: 3 (lower is better) Translates to: NFPRSWLIGCRS*SHLTTVVIAPS Trigger: GCTTGGGGCTATAACAACTGTGGTCAGGTGGGATCAGGATCTACAGCCAATCAGCCAACTCCTCGGAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR TCA 72 bp	ACCTCACCACTGTCCAGAACAGCCATGGATGAGGTCTaGCCACAGGCAATGTTGACCACTCTCTTGGTATGT	+
Preference number: 3 (lower is better) Translates to: TSPLSRTAMDEV*PQAMLTTLLVC Trigger: ACATACCAAGAGAGTGGTCAACATTGCCTGTGGTCAGACCTCATCCATGGCTGTTCTGGACAGTGGTGAGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR GCA 72 bp	AGCCTTTACCTGCTGAGCCATCTTTCCAGCCCTAGGTaGCTGTCCCTTAAGAGCATCTCAGCAAACCTAGTA	+
Preference number: 3 (lower is better) Translates to: SLYLLSHLSSPR*LSLKSISANLV Trigger: TACTAGGTTTGCTGAGATGCTCTTAAGGGACAGGCACCTAGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR GCA 72 bp	ACAAAGCCTCTTCAGTCTGTTCTCACAGTACGACGTTaGCAAGTCCAAAAGGCCTATAGCATCCTCAGGAGG	+
Preference number: 3 (lower is better) Translates to: TKPLQSVLTVRR*QVQKAYSILRR Trigger: CCTCCTGAGGATGCTATAGGCCTTTTGGACTTGGCAACGTCGTACTGTGAGAACAGACTGAAGAGGCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR CCA 72 bp	CCTGCCTGTCTTTGGTGCCTCAGTCACCATCCACCCTaGCCTAGTATTTTACAAATGACCTTTTCGGGAAAG	+
Preference number: 3 (lower is better) Translates to: PACLWCLSHHPP*PSILQMTFSGK Trigger: CTTTCCCGAAAAGGTCATTTGTAAAATACTAGGCCAGGGTGGATGGTGACTGAGGCACCAAAGACAGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR TCA 72 bp	AAGTCATCAGGCTTAGTAATAAGAGCCTTTACCTGCTaGGCCATCTTTCCAGCCCTAGGTGCCTGTCCCTTA	+
Preference number: 3 (lower is better) Translates to: KSSGLVIRAFTC*AIFPALGACPL Trigger: TAAGGGACAGGCACCTAGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCTTATTACTAAGCCTGATGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR GCA 72 bp	AGATTAATGTGCACTCATCATCTTGGCCAGGAAAACTaGCACCTAGGAGGCAGTTGTCACTTACCCATGCAC	+
Preference number: 3 (lower is better) Translates to: RLMCTHHLGQEN*HLGGSCHLPMH Trigger: GTGCATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGAGTGCACATTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR GCA 72 bp	TTAGCAATGAACTCCTTTAGCAGGGGACCATCCATTTaGCAGAACGCAGCCGTCTGGGTAACTTCTGTCAAA	+
Preference number: 3 (lower is better) Translates to: LAMNSFSRGPSI*QNAAVWVTSVK Trigger: TTTGACAGAAGTTACCCAGACGGCTGCGTTCTGGCAAATGGATGGTCCCCTGCTAAAGGAGTTCATTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR CCA 72 bp	TTATCTTGTTTGTCAACACACATGCCTGCCTGTCTTTaGTGCCTCAGTCACCATCCACCCTGGCCTAGTATT	+
Preference number: 3 (lower is better) Translates to: LSCLSTHMPACL*CLSHHPPWPSI Trigger: AATACTAGGCCAGGGTGGATGGTGACTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CAA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGATGTGCACTCATCATCTaGGCCAGGAAAACTGCCACC	+
Preference number: 3 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGCALII*ARKTAT Trigger: GGTGGCAGTTTTCCTGGCCAAGATGATGAGTGCACA...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CAA 90 bp	GTCTGTGTAGAGGTACTGGAGAAAGGCACGGTACACAGGGTAAGAAAACTGGTCTTTTTCCACCATGATTaGTGTTGGGCTCAGCAGGTT	+
Preference number: 3 (lower is better) Translates to: VCVEVLEKGTVHRVRKLVFFHHD*CWAQQV Trigger: AACCTGCTGAGCCCAACACAAATCATGGTGGAAAAA...GACCAGTTTTCTTACCCTGTGTACCGTGCCTTTCTCCAGTACCTCTACACAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CAA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTTCCTATTTATCTTGTTaGTCAACACACATGCCTGCC	+
Preference number: 3 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSSYLSC*STHMPA Trigger: GGCAGGCATGTGTGTTGACAAACAAGATAAATAGGA...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR TCA 72 bp	TCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTaGACTGTCTACGGGTGTGGATTTGCAGGTGTAATT	+
Preference number: 3 (lower is better) Translates to: SAGSGTQHVFVR*TVYGCGFAGVI Trigger: AATTACACCTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
3UTR GCA 72 bp	TTTGTGAGTAATTATAGGGAGAGGGGGATGGTAGTGTaGACGCTGGTCTCAAACACAACCTTAGTGAAGCAC	+
Preference number: 3 (lower is better) Translates to: FVSNYRERGMVV*TLVSNTTLVKH Trigger: GTGCTTCACTAAGGTTGTGTTTGAGACCAGCGTGCACACTACCATCCCCCTCTCCCTATAATTACTCACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CCA 72 bp	AAATATCCTTCATATATTCCTACAGAGCACTGTCTATaGTGTGGGGCTTTACCTGCAGATCACCGCACCCAC	+
Preference number: 3 (lower is better) Translates to: KYPSYIPTEHCL*CGALPADHRTH Trigger: GTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGAAGGATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174009.8
3UTR CCA 72 bp	ACTACAGCAGTTCAGATTAATGTGCACTCATCATCTTaGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCA	+
Preference number: 3 (lower is better) Translates to: TTAVQINVHSSS*PGKLPPRRQLS Trigger: TGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGAGTGCACATTAATCTGAACTGCTGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR TCA 72 bp	ATCCTCTGCGTCATATCTGACTGCAGCAGAGAACAATaGAAAGGCGTTCTCCACAGTAATTCCTCGCTTGAT	+
Preference number: 3 (lower is better) Translates to: ILCVISDCSREQ*KGVLHSNSSLD Trigger: ATCAAGCGAGGAATTACTGTGGAGAACGCCTTTTCATTGTTCTCTGCTGCAGTCAGATATGACGCAGAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
3UTR-3UTR CAA 90 bp	TATCTTGTTTGTCAACACACATGCCTGCCTGTCTTTGGTGCCTCAGTCACCATCCTTCTTTCTCCTTTATaGTGTCTTTGTGCAGACATG	+
Preference number: 3 (lower is better) Translates to: YLVCQHTCLPVFGASVTILLSPL*CLCADM Trigger: CATGTCTGCACAAAGACACAATAAAGGAGAAAGAAG...GATGGTGACTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CCA 72 bp	CTCAAACACAACCTTAGTGAAGCACTGTTGGATAATTaGGGTGCGGGGAACCCTAATTTTTGTAACACTCTC	+
Preference number: 3 (lower is better) Translates to: LKHNLSEALLDN*GAGNPNFCNTL Trigger: GAGAGTGTTACAAAAATTAGGGTTCCCCGCACCCCAATTATCCAACAGTGCTTCACTAAGGTTGTGTTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CAA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACTTGTTCCTATTTATCTaGTTTGTCAACACACATGCC	+
Preference number: 3 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHLFLFI*FVNTHA Trigger: GGCATGTGTGTTGACAAACAAGATAAATAGGAACAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR-3UTR CAA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCCTTCTTTCTCCTTTATaGTGTCTTTGTGCAGACATG	+
Preference number: 3 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLLLSPL*CLCADM Trigger: CATGTCTGCACAAAGACACAATAAAGGAGAAAGAAG...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CCA 72 bp	GGGTGTGGATTTGCAGGTGTAATTTGTGCTTTTTCGTaGGTAAGTTTTTCAAGTAAGACCACCAGTAAATGT	+
Preference number: 3 (lower is better) Translates to: GCGFAGVICAFS*VSFSSKTTSKC Trigger: ACATTTACTGGTGGTCTTACTTGAAAAACTTACCCACGAAAAAGCACAAATTACACCTGCAAATCCACACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
3UTR CCA 72 bp	TTCTTCTTTCTCCTTTATTGTGTCTTTGTGCAGACATaGTACATGTGTAGCAGTAAGGGACAACTTATAAGT	+
Preference number: 3 (lower is better) Translates to: FFFLLYCVFVQT*YMCSSKGQLIS Trigger: ACTTATAAGTTGTCCCTTACTGCTACACATGTACCATGTCTGCACAAAGACACAATAAAGGAGAAAGAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACACTCCATCTTCAGTGGTaGGGAGGACATGGGGGCCAC	+
Preference number: 4 (lower is better) Translates to: VWGFTCRSPHPQCPRALTLHLQW*GGHGGH Trigger: GTGGCCCCCATGTCCTCCTCACCACTGAAGATGGAG...TGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACATCCAGCTTCCTGGGGTaGGAGCAGAGTGAAGATTGG	+
Preference number: 4 (lower is better) Translates to: VWGFTCRSPHPQCPRALTSSFLG*EQSEDW Trigger: CCAATCTTCACTCTGCTCTCACCCCAGGAAGCTGGA...TGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	TGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACACTGTCCAGAACAGCCATaGATGAGGTCTGACCACAGG	+
Preference number: 4 (lower is better) Translates to: CGALPADHRTHSAPELSHCPEQP*MRSDHR Trigger: CCTGTGGTCAGACCTCATCCATGGCTGTTCTGGACA...GTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	GTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACAATAGATCCAGCTTCCTaGGGTGAGAGCAGAGTGAAG	+
Preference number: 4 (lower is better) Translates to: VWGFTCRSPHPQCPRALTIDPAS*GESRVK Trigger: CTTCACTCTGCTCTCACCCCAGGAAGCTGGATCTAT...TGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	TGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACACGTCCCATTTCCCAGTTaGCTGTATCCATTATGGCCC	+
Preference number: 4 (lower is better) Translates to: CGALPADHRTHSAPELSHVPFPS*LYPLWP Trigger: GGGCCATAATGGATACAGCCAACTGGGAAATGGGAC...GTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174009.8
CDS-3UTR CCA 90 bp	AGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGCAGATGTGTGGGTaGAGTGGCAAGCTGCAATCT	+
Preference number: 4 (lower is better) Translates to: STVYGVGLYLQITAPTVPQQMCG*SGKLQS Trigger: AGATTGCAGCTTGCCACTCCACCCACACATCTGCTG...GGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCCTCTGCGTCATATCTaGCTGCAGCAGAGAACAATG	+
Preference number: 4 (lower is better) Translates to: STVYGVGLYLQITAPTVPPLRHI*LQQRTM Trigger: CATTGTTCTCTGCTGCAGTCAGATATGACGCAGAGG...GGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	AGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCTCACTGGGGTCAACTaGTTGCCATTGTTTCCCAAG	+
Preference number: 4 (lower is better) Translates to: STVYGVGLYLQITAPTVPLTGVN*LPLFPK Trigger: CTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAG...GGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	CAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGTGGATTTGCAGGCCCGCCTTGTGTCTTaGCAGCAGATGTGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: QELSTFLSGELSTGVDLQARLVS*QQMCGW Trigger: CCACCCACACATCTGCTGCCAAGACACAAGGCGGGC...CTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	AAAAGTCTTCATGCTCTACAGACAGGAGGCGCCATGAGACAGCCGGGGTGCCAAGTCCCATTTCCCAGTTaGCTGTATCCATTATGGCCC	+
Preference number: 4 (lower is better) Translates to: KSLHALQTGGAMRQPGCQVPFPS*LYPLWP Trigger: GGGCCATAATGGATACAGCCAACTGGGAAATGGGAC...TTGGCACCCCGGCTGTCTCATGGCGCCTCCTGTCTGTAGAGCATGAAGACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
CDS-3UTR CCA 90 bp	TATCTTGTTTGTCAACACACATGCCTGCCTGTCTTTGGTGCCTCAGTCACCATCGCCCGCCTTGTGTCTTaGCAGCAGATGTGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: YLVCQHTCLPVFGASVTIARLVS*QQMCGW Trigger: CCACCCACACATCTGCTGCCAAGACACAAGGCGGGC...GATGGTGACTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CAA 72 bp	TCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTaGTCACTTACCCATGCACCAGGCAACAGCTGTAAC	+
Preference number: 4 (lower is better) Translates to: SSWPGKLPPRRQ*SLTHAPGNSCN Trigger: GTTACAGCTGTTGCCTGGTGCATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	CAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGTGGATTTGCAGTCCAGCTTCCTGGGGTaGGAGCAGAGTGAAGATTGG	+
Preference number: 4 (lower is better) Translates to: QELSTFLSGELSTGVDLQSSFLG*EQSEDW Trigger: CCAATCTTCACTCTGCTCTCACCCCAGGAAGCTGGA...CTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	CTGCCTGTCTTTGGTGCCTCAGTCACCATCCACCCTGGCCTAGTATTTTACAAATTCACACACATGCCGTaGAGAGCCGCCACTCTCACT	+
Preference number: 4 (lower is better) Translates to: LPVFGASVTIHPGLVFYKFTHMP*RAATLT Trigger: AGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAA...TTTGTAAAATACTAGGCCAGGGTGGATGGTGACTGAGGCACCAAAGACAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	GTCATCAGGCTTAGTAATAAGAGCCTTTACCTGCTGAGCCATCTTTCCAGCCCTTCTGGTTCACACACATaGCGTGCAGAGCCGCCACTC	+
Preference number: 4 (lower is better) Translates to: VIRLSNKSLYLLSHLSSPSGSHT*RAEPPL Trigger: GAGTGGCGGCTCTGCACGGCATGTGTGTGAACCAGA...AGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCTTATTACTAAGCCTGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	CTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTAGCCGCCACTCTCACTaGGGTCAACTGGTTGCCATT	+
Preference number: 4 (lower is better) Translates to: LQLDQELSTFLSGELSTGSRHSH*GQLVAI Trigger: AATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCT...ACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR TCA 90 bp	ACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGACTCCATCTTCAGTGGTaGGGAGGACATGGGGGCCAC	+
Preference number: 4 (lower is better) Translates to: THKNTLAVQQAKSVSSAGLHLQW*GGHGGH Trigger: GTGGCCCCCATGTCCTCCTCACCACTGAAGATGGAG...TCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GTCATCAGGCTTAGTAATAAGAGCCTTTACCTGCTGAGCCATCTTTCCAGCCCTGCCATGGATGAGGTCTaGCCACAGGCAATGTTGACC	+
Preference number: 4 (lower is better) Translates to: VIRLSNKSLYLLSHLSSPAMDEV*PQAMLT Trigger: GGTCAACATTGCCTGTGGTCAGACCTCATCCATGGC...AGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCTTATTACTAAGCCTGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCACTTACCCATCAGAACAGCCATGGATaGGGTCTGACCACAGGCAAT	+
Preference number: 4 (lower is better) Translates to: SSSWPGKLPPRRQLSLTHQNSHG*GLTTGN Trigger: ATTGCCTGTGGTCAGACCTCATCCATGGCTGTTCTG...ATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTTGCAGCAGAAGTGGGTaGGGTGCGGAAGGATCACCG	+
Preference number: 4 (lower is better) Translates to: KLKVCLQLDQELSTFLSGCSRSG*GAEGSP Trigger: CGGTGATCCTTCCGCACCTCACCCACTTCTGCTGCA...ACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAGACACACTTTTAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	TGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACACGCTACTTCAATCACCTaGTTGATCAAGAGATTAGTA	+
Preference number: 4 (lower is better) Translates to: CGALPADHRTHSAPELSHATSIT*LIKRLV Trigger: TACTAATCTCTTGATCAAGCAGGTGATTGAAGTAGC...GTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	CTGCCTGTCTTTGGTGCCTCAGTCACCATCCACCCTGGCCTAGTATTTTACAAACTGGGGTCAACTGGTTaGCATTGTTTCCCAAGCCCA	+
Preference number: 4 (lower is better) Translates to: LPVFGASVTIHPGLVFYKLGSTG*HCFPSP Trigger: TGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAG...TTTGTAAAATACTAGGCCAGGGTGGATGGTGACTGAGGCACCAAAGACAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	CAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGTGGATTTGCAGCTGGGGTCAACTGGTTaGCATTGTTTCCCAAGCCCA	+
Preference number: 4 (lower is better) Translates to: QELSTFLSGELSTGVDLQLGSTG*HCFPSP Trigger: TGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAG...CTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR GCA 90 bp	CTGCCTGTCTTTGGTGCCTCAGTCACCATCCACCCTGGCCTAGTATTTTACAAACTTCCAGTTCCCAGCTaGCCATATGTGTTAGCTCCC	+
Preference number: 4 (lower is better) Translates to: LPVFGASVTIHPGLVFYKLPVPS*PYVLAP Trigger: GGGAGCTAACACATATGGGCAGCTGGGAACTGGAAG...TTTGTAAAATACTAGGCCAGGGTGGATGGTGACTGAGGCACCAAAGACAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCACTTACCCATTTCCGAGGAGTTGGCTaGTTGGCTGTAGATCCTGAT	+
Preference number: 4 (lower is better) Translates to: SSSWPGKLPPRRQLSLTHFRGVG*LAVDPD Trigger: ATCAGGATCTACAGCCAATCAGCCAACTCCTCGGAA...ATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCACTTACCCATCGCTTGATGATGTGCTaGCAAAGCCTCTTCAGTCTG	+
Preference number: 4 (lower is better) Translates to: SSSWPGKLPPRRQLSLTHRLMMC*QSLFSL Trigger: CAGACTGAAGAGGCTTTGTCAGCACATCATCAAGCG...ATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTCGCTTGATGATGTGCTaGCAAAGCCTCTTCAGTCTG	+
Preference number: 4 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSRLMMC*QSLFSL Trigger: CAGACTGAAGAGGCTTTGTCAGCACATCATCAAGCG...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTTCTTGGGCACCAGAGTaGTCTGGTTATCTCCAGTTC	+
Preference number: 4 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSSWAPE*SGYLQF Trigger: GAACTGGAGATAACCAGAGCACTCTGGTGCCCAAGA...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTGTCCCATTTCCCAGTTaGCTGTATCCATTATGGCCC	+
Preference number: 4 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSVPFPS*LYPLWP Trigger: GGGCCATAATGGATACAGCCAACTGGGAAATGGGAC...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	GGGACAACTTATAAGTCAGCTCTCTCCACCATGTGGATTCTGGGGATTCAAGTTAGCCGCCACTCTCACTaGGGTCAACTGGTTGCCATT	+
Preference number: 4 (lower is better) Translates to: GTTYKSALSTMWILGIQVSRHSH*GQLVAI Trigger: AATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCT...AACTTGAATCCCCAGAATCCACATGGTGGAGAGAGCTGACTTATAAGTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	GGGACAACTTATAAGTCAGCTCTCTCCACCATGTGGATTCTGGGGATTCAAGTTTTGGCAGCAGATGTGTaGGTGGAGTGGCAAGCTGCA	+
Preference number: 4 (lower is better) Translates to: GTTYKSALSTMWILGIQVLAADV*VEWQAA Trigger: TGCAGCTTGCCACTCCACCCACACATCTGCTGCCAA...AACTTGAATCCCCAGAATCCACATGGTGGAGAGAGCTGACTTATAAGTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACGGGGTGAGAGCAGAGTaGAGATTGGCCACTTTCCTA	+
Preference number: 4 (lower is better) Translates to: SYIPTEHCLWCGALPADHGVRAE*RLATFL Trigger: TAGGAAAGTGGCCAATCTTCACTCTGCTCTCACCCC...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTGACCACAGGCAATGTTaGCCACTCTCTTGGTATGTA	+
Preference number: 4 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSDHRQC*PLSWYV Trigger: TACATACCAAGAGAGTGGTCAACATTGCCTGTGGTC...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACGCCATGGATGAGGTCTaGCCACAGGCAATGTTGACC	+
Preference number: 4 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHAMDEV*PQAMLT Trigger: GGTCAACATTGCCTGTGGTCAGACCTCATCCATGGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCAT	+
Preference number: 4 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHSPAVH*HCSPSH Trigger: ATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR GCA 90 bp	ACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGAAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCAT	+
Preference number: 4 (lower is better) Translates to: THKNTLAVQQAKSVSSAGSPAVH*HCSPSH Trigger: ATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCT...TCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR GCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGATTCACACACATGCCGTaGAGAGCCGCCACTCTCACT	+
Preference number: 4 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGFTHMP*RAATLT Trigger: AGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAA...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	CTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGAGCAGAGTGAAGATTaGCCACTTTCCTACATCCAC	+
Preference number: 4 (lower is better) Translates to: LQLDQELSTFLSGELSTGEQSED*PLSYIH Trigger: GTGGATGTAGGAAAGTGGCCAATCTTCACTCTGCTC...ACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	TCTGCGTCATATCTGACTGCAGCAGAGAACAATGAAAAGGCGTTCTCCACAGTAACAGGAGCAATGCCTTaGTTGGTGGTCCCATTTCCC	+
Preference number: 4 (lower is better) Translates to: SASYLTAAENNEKAFSTVTGAMP*LVVPFP Trigger: GGGAAATGGGACCACCAACCAAGGCATTGCTCCTGT...TACTGTGGAGAACGCCTTTTCATTGTTCTCTGCTGCAGTCAGATATGACGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
CDS-3UTR CCA 90 bp	TATCTTGTTTGTCAACACACATGCCTGCCTGTCTTTGGTGCCTCAGTCACCATCCTCACTGGGGTCAACTaGTTGCCATTGTTTCCCAAG	+
Preference number: 4 (lower is better) Translates to: YLVCQHTCLPVFGASVTILTGVN*LPLFPK Trigger: CTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAG...GATGGTGACTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAAGCCGCCACTCTCACTaGGGTCAACTGGTTGCCATT	+
Preference number: 4 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGSRHSH*GQLVAI Trigger: AATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCT...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	GGGACAACTTATAAGTCAGCTCTCTCCACCATGTGGATTCTGGGGATTCAAGTTCAGCAGATGTGTGGGTaGAGTGGCAAGCTGCAATCT	+
Preference number: 4 (lower is better) Translates to: GTTYKSALSTMWILGIQVQQMCG*SGKLQS Trigger: AGATTGCAGCTTGCCACTCCACCCACACATCTGCTG...AACTTGAATCCCCAGAATCCACATGGTGGAGAGAGCTGACTTATAAGTTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGGGGTGAGAGCAGAGTaGAGATTGGCCACTTTCCTA	+
Preference number: 4 (lower is better) Translates to: KLKVCLQLDQELSTFLSGGVRAE*RLATFL Trigger: TAGGAAAGTGGCCAATCTTCACTCTGCTCTCACCCC...ACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAGACACACTTTTAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	CTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGCTAAAGCCATCGAATaGTGTGAACCACAAGCTACT	+
Preference number: 4 (lower is better) Translates to: LQLDQELSTFLSGELSTGAKAIE*CEPQAT Trigger: AGTAGCTTGTGGTTCACATCATTCGATGGCTTTAGC...ACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR TCA 90 bp	CACACACACACACACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAGACCACAGGCAATGTTaGCCACTCTCTTGGTATGTA	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTQKHPSCSADHRQC*PLSWYV Trigger: TACATACCAAGAGAGTGGTCAACATTGCCTGTGGTC...TGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCTGCAGCAGAAGTGGGTaGGGTGCGGAAGGATCACCG	+
Preference number: 4 (lower is better) Translates to: NFKDTVWDLLRNVTSLASCSRSG*GAEGSP Trigger: CGGTGATCCTTCCGCACCTCACCCACTTCTGCTGCA...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCCTCTGCGTCATATCTaGCTGCAGCAGAGAACAATG	+
Preference number: 4 (lower is better) Translates to: SYIPTEHCLWCGALPADHPLRHI*LQQRTM Trigger: CATTGTTCTCTGCTGCAGTCAGATATGACGCAGAGG...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	CAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGTGGATTTGCAGGGTACCAAAGACACATaGTTTCCTGATAGATCCAGC	+
Preference number: 4 (lower is better) Translates to: QELSTFLSGELSTGVDLQGTKDT*FPDRSS Trigger: GCTGGATCTATCAGGAAAGCATGTGTCTTTGGTACC...CTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	GGGACAACTTATAAGTCAGCTCTCTCCACCATGTGGATTCTGGGGATTCAAGTTTCTTGGGCACCAGAGTaGTCTGGTTATCTCCAGTTC	+
Preference number: 4 (lower is better) Translates to: GTTYKSALSTMWILGIQVSWAPE*SGYLQF Trigger: GAACTGGAGATAACCAGAGCACTCTGGTGCCCAAGA...AACTTGAATCCCCAGAATCCACATGGTGGAGAGAGCTGACTTATAAGTTGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	ACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGACTGGGGTCAACTGGTTaGCATTGTTTCCCAAGCCCA	+
Preference number: 4 (lower is better) Translates to: THKNTLAVQQAKSVSSAGLGSTG*HCFPSP Trigger: TGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAG...TCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR GCA 90 bp	ACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGCTTCCAGTTCCCAGCTaGCCATATGTGTTAGCTCCC	+
Preference number: 4 (lower is better) Translates to: THTHTHKNTLAVQQAKSVLPVPS*PYVLAP Trigger: GGGAGCTAACACATATGGGCAGCTGGGAACTGGAAG...CACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	CCAATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCACAGGAGCAATGCCTTaGTTGGTGGTCCCATTTCCC	+
Preference number: 4 (lower is better) Translates to: PIRLKHGPKVLTPDFQNSTGAMP*LVVPFP Trigger: GGGAAATGGGACCACCAACCAAGGCATTGCTCCTGT...GCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
CDS-3UTR TCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCCTCATCATTGTCAGTaGCATAGATCGCCTCATTGG	+
Preference number: 4 (lower is better) Translates to: SYIPTEHCLWCGALPADHPHHCQ*HRSPHW Trigger: CCAATGAGGCGATCTATGTCACTGACAATGATGAGG...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAGCAAGCCCTCATCTGTaGGTGCTAGTGTATGTGCAT	+
Preference number: 4 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGASPHL*VLVYVH Trigger: ATGCACATACACTAGCACTCACAGATGAGGGCTTGC...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	GGAACCCTAATTTTTGTAACACTCTCCTCTCCAAGCAAAGCTCTTTTACCATCAAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCAT	+
Preference number: 4 (lower is better) Translates to: GTLIFVTLSSPSKALLPSSPAVH*HCSPSH Trigger: ATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCT...TGATGGTAAAAGAGCTTTGCTTGGAGAGGAGAGTGTTACAAAAATTAGGGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	TTTGCAGGTGTAATTTGTGCTTTTTCGTGGGTAAGTTTTTCAAGTAAGACCACCTCTGGTTCACACACATaGCGTGCAGAGCCGCCACTC	+
Preference number: 4 (lower is better) Translates to: FAGVICAFSWVSFSSKTTSGSHT*RAEPPL Trigger: GAGTGGCGGCTCTGCACGGCATGTGTGTGAACCAGA...GGTGGTCTTACTTGAAAAACTTACCCACGAAAAAGCACAAATTACACCTGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR GCA 90 bp	CAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGTGGATTTGCAGAACATGGACCGAAAGTaGTCACACCTGATTTTCAGA	+
Preference number: 4 (lower is better) Translates to: QELSTFLSGELSTGVDLQNMDRK*SHLIFR Trigger: TCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTT...CTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	ACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGATAGATCCAGCTTCCTaGGGTGAGAGCAGAGTGAAG	+
Preference number: 4 (lower is better) Translates to: THTHTHKNTLAVQQAKSVIDPAS*GESRVK Trigger: CTTCACTCTGCTCTCACCCCAGGAAGCTGGATCTAT...CACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	AAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGGCACCAGAGTGCTCTaGTTATCTCCAGTTCCTAGA	+
Preference number: 4 (lower is better) Translates to: KLKVCLQLDQELSTFLSGGTRVL*LSPVPR Trigger: TCTAGGAACTGGAGATAACCAGAGCACTCTGGTGCC...ACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAGACACACTTTTAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	CACACACACACACACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAAGATTAGTACAGACTTaGACAGGAGCAATGCCTTGG	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTQKHPSCSARLVQT*TGAMPW Trigger: CCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCT...TGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
3UTR CAA 72 bp	AGAGGGGCTTTGAGCTCTTGTTCCTATTTATCTTGTTaGTCAACACACATGCCTGCCTGTCTTTGGTGCCTC	+
Preference number: 4 (lower is better) Translates to: RGALSSCSYLSC*STHMPACLWCL Trigger: GAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATAAATAGGAACAAGAGCTCAAAGCCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GGAACCCTAATTTTTGTAACACTCTCCTCTCCAAGCAAAGCTCTTTTACCATCACAGAACAGCCATGGATaGGGTCTGACCACAGGCAAT	+
Preference number: 4 (lower is better) Translates to: GTLIFVTLSSPSKALLPSQNSHG*GLTTGN Trigger: ATTGCCTGTGGTCAGACCTCATCCATGGCTGTTCTG...TGATGGTAAAAGAGCTTTGCTTGGAGAGGAGAGTGTTACAAAAATTAGGGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	ACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTGCAGCAGAGAACAATaGAAAGGCGTTCTCCACAGT	+
Preference number: 4 (lower is better) Translates to: THTHTHKNTLAVQQAKSVCSREQ*KGVLHS Trigger: ACTGTGGAGAACGCCTTTTCATTGTTCTCTGCTGCA...CACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	TTTGCAGGTGTAATTTGTGCTTTTTCGTGGGTAAGTTTTTCAAGTAAGACCACCTTCACACACATGCCGTaGAGAGCCGCCACTCTCACT	+
Preference number: 4 (lower is better) Translates to: FAGVICAFSWVSFSSKTTFTHMP*RAATLT Trigger: AGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAA...GGTGGTCTTACTTGAAAAACTTACCCACGAAAAAGCACAAATTACACCTGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	ACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGGAGCAGAGTGAAGATTaGCCACTTTCCTACATCCAC	+
Preference number: 4 (lower is better) Translates to: THTHTHKNTLAVQQAKSVEQSED*PLSYIH Trigger: GTGGATGTAGGAAAGTGGCCAATCTTCACTCTGCTC...CACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACAGATTAGTACAGACTTaGACAGGAGCAATGCCTTGG	+
Preference number: 4 (lower is better) Translates to: SYIPTEHCLWCGALPADHRLVQT*TGAMPW Trigger: CCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCT...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174009.8
CDS-3UTR CCA 90 bp	CTCTATAACCCTCTCCATCAGCTGCTAAAGCCATCGAATGATGTGAACCACAAGAGATTAGTACAGACTTaGACAGGAGCAATGCCTTGG	+
Preference number: 4 (lower is better) Translates to: LYNPLHQLLKPSNDVNHKRLVQT*TGAMPW Trigger: CCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCT...CTTGTGGTTCACATCATTCGATGGCTTTAGCAGCTGATGGAGAGGGTTATAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172810.2
CDS-3UTR CCA 90 bp	GGAACCCTAATTTTTGTAACACTCTCCTCTCCAAGCAAAGCTCTTTTACCATCATGTCCAGAACAGCCATaGATGAGGTCTGACCACAGG	+
Preference number: 4 (lower is better) Translates to: GTLIFVTLSSPSKALLPSCPEQP*MRSDHR Trigger: CCTGTGGTCAGACCTCATCCATGGCTGTTCTGGACA...TGATGGTAAAAGAGCTTTGCTTGGAGAGGAGAGTGTTACAAAAATTAGGGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CAA 72 bp	AGGAAGAGGGGCTTTGAGCTCTTGTTCCTATTTATCTaGTTTGTCAACACACATGCCTGCCTGTCTTTGGTG	+
Preference number: 4 (lower is better) Translates to: RKRGFELLFLFI*FVNTHACLSLV Trigger: CACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATAAATAGGAACAAGAGCTCAAAGCCCCTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	TCATATATTCCTACAGAGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACAGCCATCGAATGATGTaGACCACAAGCTACTTCAAT	+
Preference number: 4 (lower is better) Translates to: SYIPTEHCLWCGALPADHSHRMM*TTSYFN Trigger: ATTGAAGTAGCTTGTGGTTCACATCATTCGATGGCT...GTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCTCTGTAGGAATATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCTTCCGAGGAGTTGGCTaGTTGGCTGTAGATCCTGAT	+
Preference number: 4 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLFRGVG*LAVDPD Trigger: ATCAGGATCTACAGCCAATCAGCCAACTCCTCGGAA...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	CACACACACACACACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAGAAAGTGCTCACACCTaGTTTTCAGAACAGCTTTAT	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTQKHPSCSAESAHT*FSEQLY Trigger: ATAAAGCTGTTCTGAAAATCAGGTGTGAGCACTTTC...TGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	CTGAAGTATAAAACTGGTTCCAGTAACTTCAAGGATACAGTTTGGGATCTTTTATCTGGTTCACACACATaGCGTGCAGAGCCGCCACTC	+
Preference number: 4 (lower is better) Translates to: LKYKTGSSNFKDTVWDLLSGSHT*RAEPPL Trigger: GAGTGGCGGCTCTGCACGGCATGTGTGTGAACCAGA...TAAAAGATCCCAAACTGTATCCTTGAAGTTACTGGAACCAGTTTTATACTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCACAGGAGCAATGCCTTaGTTGGTGGTCCCATTTCCC	+
Preference number: 4 (lower is better) Translates to: NFKDTVWDLLRNVTSLASTGAMP*LVVPFP Trigger: GGGAAATGGGACCACCAACCAAGGCATTGCTCCTGT...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACAGATTAGTACAGACTTaGACAGGAGCAATGCCTTGG	+
Preference number: 4 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHRLVQT*TGAMPW Trigger: CCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR TCA 90 bp	AAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAAGCCATCGAATGATGTaGACCACAAGCTACTTCAAT	+
Preference number: 4 (lower is better) Translates to: KNTLAVQQAKSVSSAGSGSHRMM*TTSYFN Trigger: ATTGAAGTAGCTTGTGGTTCACATCATTCGATGGCT...TCCTGATCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR TCA 90 bp	TTTGCAGGTGTAATTTGTGCTTTTTCGTGGGTAAGTTTTTCAAGTAAGACCACCGCAAGCCCTCATCTGTaGGTGCTAGTGTATGTGCAT	+
Preference number: 4 (lower is better) Translates to: FAGVICAFSWVSFSSKTTASPHL*VLVYVH Trigger: ATGCACATACACTAGCACTCACAGATGAGGGCTTGC...GGTGGTCTTACTTGAAAAACTTACCCACGAAAAAGCACAAATTACACCTGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCTGCAGCAGAGAACAATaGAAAGGCGTTCTCCACAGT	+
Preference number: 4 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLCSREQ*KGVLHS Trigger: ACTGTGGAGAACGCCTTTTCATTGTTCTCTGCTGCA...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCGTCCCATTTCCCAGTTaGCTGTATCCATTATGGCCC	+
Preference number: 4 (lower is better) Translates to: NFKDTVWDLLRNVTSLASVPFPS*LYPLWP Trigger: GGGCCATAATGGATACAGCCAACTGGGAAATGGGAC...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	CAGGCAATGTTGACCACTCTCTTGGTATGTAAACAGTTTGTAACTTTCCGAGGAAGATTAGTACAGACTTaGACAGGAGCAATGCCTTGG	+
Preference number: 4 (lower is better) Translates to: QAMLTTLLVCKQFVTFRGRLVQT*TGAMPW Trigger: CCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCT...TCCTCGGAAAGTTACAAACTGTTTACATACCAAGAGAGTGGTCAACATTGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
CDS-3UTR CCA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCCTCACTGGGGTCAACTaGTTGCCATTGTTTCCCAAG	+
Preference number: 4 (lower is better) Translates to: NFKDTVWDLLRNVTSLASLTGVN*LPLFPK Trigger: CTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAG...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	CTGAAGTATAAAACTGGTTCCAGTAACTTCAAGGATACAGTTTGGGATCTTTTATTGGCAGCAGATGTGTaGGTGGAGTGGCAAGCTGCA	+
Preference number: 4 (lower is better) Translates to: LKYKTGSSNFKDTVWDLLLAADV*VEWQAA Trigger: TGCAGCTTGCCACTCCACCCACACATCTGCTGCCAA...TAAAAGATCCCAAACTGTATCCTTGAAGTTACTGGAACCAGTTTTATACTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CAA 72 bp	AGCTGTAACATGATCAGGAAGAGGGGCTTTGAGCTCTaGTTCCTATTTATCTTGTTTGTCAACACACATGCC	+
Preference number: 4 (lower is better) Translates to: SCNMIRKRGFEL*FLFILFVNTHA Trigger: GGCATGTGTGTTGACAAACAAGATAAATAGGAACAAGAGCTCAAAGCCCCTCTTCCTGATCATGTTACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR GCA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCGGTACCAAAGACACATaGTTTCCTGATAGATCCAGC	+
Preference number: 4 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLGTKDT*FPDRSS Trigger: GCTGGATCTATCAGGAAAGCATGTGTCTTTGGTACC...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	CTGAAGTATAAAACTGGTTCCAGTAACTTCAAGGATACAGTTTGGGATCTTTTAACAGGAGCAATGCCTTaGTTGGTGGTCCCATTTCCC	+
Preference number: 4 (lower is better) Translates to: LKYKTGSSNFKDTVWDLLTGAMP*LVVPFP Trigger: GGGAAATGGGACCACCAACCAAGGCATTGCTCCTGT...TAAAAGATCCCAAACTGTATCCTTGAAGTTACTGGAACCAGTTTTATACTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CCA 90 bp	AAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTCACCATGATTTGTGTTaGGCTCAGCAGGTTATTTTT	+
Preference number: 4 (lower is better) Translates to: KLKVCLQLDQELSTFLSGHHDLC*AQQVIF Trigger: AAAAATAACCTGCTGAGCCCAACACAAATCATGGTG...ACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAGACACACTTTTAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CCA 90 bp	TTTCTTTCACTAACACACACACACACACACACACACACACACACACACACACACCACCATGATTTGTGTTaGGCTCAGCAGGTTATTTTT	+
Preference number: 4 (lower is better) Translates to: FLSLTHTHTHTHTHTHTHHHDLC*AQQVIF Trigger: AAAAATAACCTGCTGAGCCCAACACAAATCATGGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTGAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCGCTAAAGCCATCGAATaGTGTGAACCACAAGCTACT	+
Preference number: 4 (lower is better) Translates to: NFKDTVWDLLRNVTSLASAKAIE*CEPQAT Trigger: AGTAGCTTGTGGTTCACATCATTCGATGGCTTTAGC...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR GCA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCAACATGGACCGAAAGTaGTCACACCTGATTTTCAGA	+
Preference number: 4 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLNMDRK*SHLIFR Trigger: TCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTT...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR TCA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCAGCCATCGAATGATGTaGACCACAAGCTACTTCAAT	+
Preference number: 4 (lower is better) Translates to: NFKDTVWDLLRNVTSLASSHRMM*TTSYFN Trigger: ATTGAAGTAGCTTGTGGTTCACATCATTCGATGGCT...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR TCA 90 bp	CTGAAGTATAAAACTGGTTCCAGTAACTTCAAGGATACAGTTTGGGATCTTTTAGCTAAAGCCATCGAATaGTGTGAACCACAAGCTACT	+
Preference number: 4 (lower is better) Translates to: LKYKTGSSNFKDTVWDLLAKAIE*CEPQAT Trigger: AGTAGCTTGTGGTTCACATCATTCGATGGCTTTAGC...TAAAAGATCCCAAACTGTATCCTTGAAGTTACTGGAACCAGTTTTATACTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR TCA 90 bp	CTGAAGTATAAAACTGGTTCCAGTAACTTCAAGGATACAGTTTGGGATCTTTTAGAAAGTGCTCACACCTaGTTTTCAGAACAGCTTTAT	+
Preference number: 4 (lower is better) Translates to: LKYKTGSSNFKDTVWDLLESAHT*FSEQLY Trigger: ATAAAGCTGTTCTGAAAATCAGGTGTGAGCACTTTC...TAAAAGATCCCAAACTGTATCCTTGAAGTTACTGGAACCAGTTTTATACTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
3UTR CAA 72 bp	AAAGCTCTTTTACCATCAGCTTCTCATAGGTACTTCTaGTCACTTCTCTATAGGGACCTAAATCTTTTAGTT	+
Preference number: 4 (lower is better) Translates to: KALLPSASHRYF*SLLYRDLNLLV Trigger: AACTAAAAGATTTAGGTCCCTATAGAGAAGTGACAAGAAGTACCTATGAGAAGCTGATGGTAAAAGAGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	AGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCTGCCCGCCTTGTGTCTaGGCAGCAGATGTGTGGGTG	+
Preference number: 5 (lower is better) Translates to: STVYGVGLYLQITAPTVPCPPCV*AADVWV Trigger: CACCCACACATCTGCTGCCAAGACACAAGGCGGGCA...GGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	AGCACTGTCTATGGTGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCC	+
Preference number: 5 (lower is better) Translates to: STVYGVGLYLQITAPTVPDRSNA*VGGPIS Trigger: GGAAATGGGACCACCAACCAAGGCATTGCTCCTGTC...GGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACACCATAGACAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174009.8
CDS CCA 90 bp	CATCATCTGGTTCACACACATGCCGTGCAGAGCCGCCACTCTCACTaGGGTCAACTGGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATT	+
Preference number: 5 (lower is better) Translates to: HHLVHTHAVQSRHSH*GQLVAIVSQAQLSI Trigger: AATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAGTGAGAGTGGCGGCTCTGCACGGCATGTGTGTGAACCAGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174830.2
CDS GCA 90 bp	CTGGGGTCAACTGGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCATACACCTCTCCATCAGCTGCTAAAG	+
Preference number: 5 (lower is better) Translates to: LGSTGCHCFPSPAVH*HCSPSHTPLHQLLK Trigger: CTTTAGCAGCTGATGGAGAGGTGTATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGTTGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	TGTGGGGCTTTACCTGCAGATCACCGCACCCACAGTGCCCCAGAGCTCTCACACTTTTTCCACCATGATTaGTGTTGGGCTCAGCAGGTT	+
Preference number: 5 (lower is better) Translates to: CGALPADHRTHSAPELSHFFHHD*CWAQQV Trigger: AACCTGCTGAGCCCAACACAAATCATGGTGGAAAAA...GTGTGAGAGCTCTGGGGCACTGTGGGTGCGGTGATCTGCAGGTAAAGCCCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	TCATCATCTTGGCCAGGAAAACTGCCACCTAGGAGGCAGTTGTCACTTACCCATTGCCCGCCTTGTGTCTaGGCAGCAGATGTGTGGGTG	+
Preference number: 5 (lower is better) Translates to: SSSWPGKLPPRRQLSLTHCPPCV*AADVWV Trigger: CACCCACACATCTGCTGCCAAGACACAAGGCGGGCA...ATGGGTAAGTGACAACTGCCTCCTAGGTGGCAGTTTTCCTGGCCAAGATGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	GTCTGTGTAGAGGTACTGGAGAAAGGCACGGTACACAGGGTAAGAAAACTGGTCGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGT	+
Preference number: 5 (lower is better) Translates to: VCVEVLEKGTVHRVRKLVGAMPW*VVPFPS Trigger: ACTGGGAAATGGGACCACCAACCAAGGCATTGCTCC...GACCAGTTTTCTTACCCTGTGTACCGTGCCTTTCTCCAGTACCTCTACACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
CDS CCA 90 bp	GCAGAGGTACCAAAGACACATGCTTTCCTGATAGATCCAGCTTCCTaGGGTGAGAGCAGAGTGAAGATTGGCCACTTTCCTACATCCACC	+
Preference number: 5 (lower is better) Translates to: AEVPKTHAFLIDPAS*GESRVKIGHFPTST Trigger: GGTGGATGTAGGAAAGTGGCCAATCTTCACTCTGCTCTCACCCCAGGAAGCTGGATCTATCAGGAAAGCATGTGTCTTTGGTACCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000142326.2 ENSMUST00000173547.8
CDS-3UTR CAA 90 bp	CAGGAACTCAGCACGTTTTTGTCAGGTGAACTGTCTACGGGTGTGGATTTGCAGGGTCCCATTTCCCAGTaGGCTGTATCCATTATGGCC	+
Preference number: 5 (lower is better) Translates to: QELSTFLSGELSTGVDLQGPISQ*AVSIMA Trigger: GGCCATAATGGATACAGCCAACTGGGAAATGGGACC...CTGCAAATCCACACCCGTAGACAGTTCACCTGACAAAAACGTGCTGAGTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	AGGTTATTTTTACTTCCAGTTCCCAGCTGCCCATATGTGTTAGCTCCCCAGGCAGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCC	+
Preference number: 5 (lower is better) Translates to: RLFLLPVPSCPYVLAPQADRSNA*VGGPIS Trigger: GGAAATGGGACCACCAACCAAGGCATTGCTCCTGTC...TGCCTGGGGAGCTAACACATATGGGCAGCTGGGAACTGGAAGTAAAAATAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
CDS-3UTR CAA 90 bp	CACACACACACACACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCC	+
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTQKHPSCSADRSNA*VGGPIS Trigger: GGAAATGGGACCACCAACCAAGGCATTGCTCCTGTC...TGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	GTCATCAGGCTTAGTAATAAGAGCCTTTACCTGCTGAGCCATCTTTCCAGCCCTGGTCCCATTTCCCAGTaGGCTGTATCCATTATGGCC	+
Preference number: 5 (lower is better) Translates to: VIRLSNKSLYLLSHLSSPGPISQ*AVSIMA Trigger: GGCCATAATGGATACAGCCAACTGGGAAATGGGACC...AGGGCTGGAAAGATGGCTCAGCAGGTAAAGGCTCTTATTACTAAGCCTGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	AGGTTATTTTTACTTCCAGTTCCCAGCTGCCCATATGTGTTAGCTCCCCAGGCAGGTCCCATTTCCCAGTaGGCTGTATCCATTATGGCC	+
Preference number: 5 (lower is better) Translates to: RLFLLPVPSCPYVLAPQAGPISQ*AVSIMA Trigger: GGCCATAATGGATACAGCCAACTGGGAAATGGGACC...TGCCTGGGGAGCTAACACATATGGGCAGCTGGGAACTGGAAGTAAAAATAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
CDS CCA 90 bp	TGCTTGATCAAGAGATTAGTACAGACTTGGACAGGAGCAATGCCTTaGTTGGTGGTCCCATTTCCCAGTTGGCTGTATCCATTATGGCCC	+
Preference number: 5 (lower is better) Translates to: CLIKRLVQTWTGAMP*LVVPFPSWLYPLWP Trigger: GGGCCATAATGGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTCTTGATCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000173547.8 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	ACACACAAAAACACCCTAGCTGTTCAGCAAGCTAAAAGTGTGTCTTCAGCTGGAGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGT	+
Preference number: 5 (lower is better) Translates to: THKNTLAVQQAKSVSSAGGAMPW*VVPFPS Trigger: ACTGGGAAATGGGACCACCAACCAAGGCATTGCTCC...TCCAGCTGAAGACACACTTTTAGCTTGCTGAACAGCTAGGGTGTTTTTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTGAGATTAGTACAGACTaGGACAGGAGCAATGCCTTG	+
Preference number: 5 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSEISTD*DRSNAL Trigger: CAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTC...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	CTTCCTTCATATCCTCATTCCAATAAGACTGAAACATGGACCGAAAGTGCTCACGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCC	+
Preference number: 5 (lower is better) Translates to: LPSYPHSNKTETWTESAHDRSNA*VGGPIS Trigger: GGAAATGGGACCACCAACCAAGGCATTGCTCCTGTC...GTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGGAATGAGGATATGAAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
CDS-3UTR CAA 90 bp	TATCTTGTTTGTCAACACACATGCCTGCCTGTCTTTGGTGCCTCAGTCACCATCGAGATTAGTACAGACTaGGACAGGAGCAATGCCTTG	+
Preference number: 5 (lower is better) Translates to: YLVCQHTCLPVFGASVTIEISTD*DRSNAL Trigger: CAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTC...GATGGTGACTGAGGCACCAAAGACAGGCAGGCATGTGTGTTGACAAACAAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	AGGTTATTTTTACTTCCAGTTCCCAGCTGCCCATATGTGTTAGCTCCCCAGGCAGAGATTAGTACAGACTaGGACAGGAGCAATGCCTTG	+
Preference number: 5 (lower is better) Translates to: RLFLLPVPSCPYVLAPQAEISTD*DRSNAL Trigger: CAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTC...TGCCTGGGGAGCTAACACATATGGGCAGCTGGGAACTGGAAGTAAAAATAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174009.8
CDS-3UTR CAA 90 bp	CTTCATATCCTCATTCCAATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGGTCCCATTTCCCAGTaGGCTGTATCCATTATGGCC	+
Preference number: 5 (lower is better) Translates to: LHILIPIRLKHGPKVLTPGPISQ*AVSIMA Trigger: GGCCATAATGGATACAGCCAACTGGGAAATGGGACC...AGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGGAATGAGGATATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
CDS-3UTR CAA 90 bp	ATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCTTTGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGT	+
Preference number: 5 (lower is better) Translates to: IRLKHGPKVLTPDFQNSFGAMPW*VVPFPS Trigger: ACTGGGAAATGGGACCACCAACCAAGGCATTGCTCC...AAAGCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
CDS-3UTR CAA 90 bp	GGAGAGGTTAAGGTGAAGTTTCAATTAAGTTTTGATGGATTTTGGCCTGGACTCGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCC	+
Preference number: 5 (lower is better) Translates to: GEVKVKFQLSFDGFWPGLDRSNA*VGGPIS Trigger: GGAAATGGGACCACCAACCAAGGCATTGCTCCTGTC...GAGTCCAGGCCAAAATCCATCAAAACTTAATTGAAACTTCACCTTAACCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	TTTGCAGGTGTAATTTGTGCTTTTTCGTGGGTAAGTTTTTCAAGTAAGACCACCGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGT	+
Preference number: 5 (lower is better) Translates to: FAGVICAFSWVSFSSKTTGAMPW*VVPFPS Trigger: ACTGGGAAATGGGACCACCAACCAAGGCATTGCTCC...GGTGGTCTTACTTGAAAAACTTACCCACGAAAAAGCACAAATTACACCTGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGT	+
Preference number: 5 (lower is better) Translates to: NFKDTVWDLLRNVTSLASGAMPW*VVPFPS Trigger: ACTGGGAAATGGGACCACCAACCAAGGCATTGCTCC...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	CCAATAAGACTGAAACATGGACCGAAAGTGCTCACACCTGATTTTCAGAACAGCGAGATTAGTACAGACTaGGACAGGAGCAATGCCTTG	+
Preference number: 5 (lower is better) Translates to: PIRLKHGPKVLTPDFQNSEISTD*DRSNAL Trigger: CAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTC...GCTGTTCTGAAAATCAGGTGTGAGCACTTTCGGTCCATGTTTCAGTCTTATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172810.2 ENSMUST00000174009.8
CDS-3UTR CAA 90 bp	AAGCTAAAAGTGTGTCTTCAGCTGGATCAGGAACTCAGCACGTTTTTGTCAGGTGAGATTAGTACAGACTaGGACAGGAGCAATGCCTTG	+
Preference number: 5 (lower is better) Translates to: KLKVCLQLDQELSTFLSGEISTD*DRSNAL Trigger: CAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTC...ACCTGACAAAAACGTGCTGAGTTCCTGATCCAGCTGAAGACACACTTTTAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	GGCCCTAAGTCTACAGGACTGAGGTTCTACAGAAGGTCCATTCACTACAGCAGTACTTCAATCACCTGCTaGATCAAGAGATTAGTACAG	+
Preference number: 5 (lower is better) Translates to: GPKSTGLRFYRRSIHYSSTSITC*IKRLVQ Trigger: CTGTACTAATCTCTTGATCAAGCAGGTGATTGAAGT...ACTGCTGTAGTGAATGGACCTTCTGTAGAACCTCAGTCCTGTAGACTTAGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	CTGCCTGTCTTTGGTGCCTCAGTCACCATCCACCCTGGCCTAGTATTTTACAAAACTTCAATCACCTGCTaGATCAAGAGATTAGTACAG	+
Preference number: 5 (lower is better) Translates to: LPVFGASVTIHPGLVFYKTSITC*IKRLVQ Trigger: CTGTACTAATCTCTTGATCAAGCAGGTGATTGAAGT...TTTGTAAAATACTAGGCCAGGGTGGATGGTGACTGAGGCACCAAAGACAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS-3UTR CAA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCGGTCCCATTTCCCAGTaGGCTGTATCCATTATGGCC	+
Preference number: 5 (lower is better) Translates to: NFKDTVWDLLRNVTSLASGPISQ*AVSIMA Trigger: GGCCATAATGGATACAGCCAACTGGGAAATGGGACC...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	CACACACACACACACACACACACACACACACAAAAACACCCTAGCTGTTCAGCAACTTCAATCACCTGCTaGATCAAGAGATTAGTACAG	+
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTQKHPSCSATSITC*IKRLVQ Trigger: CTGTACTAATCTCTTGATCAAGCAGGTGATTGAAGT...TGCTGAACAGCTAGGGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000174830.2
CDS-3UTR CAA 90 bp	AACTTCAAGGATACAGTTTGGGATCTTTTAAGAAATGTGACTTCTCTGGCTTCCTTTTTCCACCATGATTaGTGTTGGGCTCAGCAGGTT	+
Preference number: 5 (lower is better) Translates to: NFKDTVWDLLRNVTSLASFFHHD*CWAQQV Trigger: AACCTGCTGAGCCCAACACAAATCATGGTGGAAAAA...GGAAGCCAGAGAAGTCACATTTCTTAAAAGATCCCAAACTGTATCCTTGAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13
CDS GCA 72 bp	ACTGGTTGCCATTGTTTCCCAAGCCCAGCTGTCCATTaGCATTGTAGCCCCAGCCATACACCTCTCCATCAG	+
Preference number: 6 (lower is better) Translates to: TGCHCFPSPAVH*HCSPSHTPLHQ Trigger: CTGATGGAGAGGTGTATGGCTGGGGCTACAATGGCAATGGACAGCTGGGCTTGGGAAACAATGGCAACCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174830.2
CDS CAA 90 bp	GACTTGGACAGGAGCAATGCCTTGGTTGGTGGTCCCATTTCCCAGTaGGCTGTATCCATTATGGCCCCAGGCATAGACGACTCCATCTTC	+
Preference number: 6 (lower is better) Translates to: DLDRSNALVGGPISQ*AVSIMAPGIDDSIF Trigger: GAAGATGGAGTCGTCTATGCCTGGGGCCATAATGGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000172810.2 ENSMUST00000173547.8 ENSMUST00000174009.8
CDS TCA 72 bp	GACACATGCTTTCCTGATAGATCCAGCTTCCTGGGGTaGGAGCAGAGTGAAGATTGGCCACTTTCCTACATC	+
Preference number: 6 (lower is better) Translates to: DTCFPDRSSFLG*EQSEDWPLSYI Trigger: GATGTAGGAAAGTGGCCAATCTTCACTCTGCTCTCACCCCAGGAAGCTGGATCTATCAGGAAAGCATGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000142326.2 ENSMUST00000173547.8
CDS CCA 72 bp	CCAAAGACACATGCTTTCCTGATAGATCCAGCTTCCTaGGGTGAGAGCAGAGTGAAGATTGGCCACTTTCCT	+
Preference number: 6 (lower is better) Translates to: PKTHAFLIDPAS*GESRVKIGHFP Trigger: AGGAAAGTGGCCAATCTTCACTCTGCTCTCACCCCAGGAAGCTGGATCTATCAGGAAAGCATGTGTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000142326.2 ENSMUST00000173547.8
CDS CAA 72 bp	CAAGAGATTAGTACAGACTTGGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCCCAGTTGGCTGTATCC	+
Preference number: 6 (lower is better) Translates to: QEISTDLDRSNA*VGGPISQLAVS Trigger: GGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000172810.2 ENSMUST00000173547.8 ENSMUST00000174009.8 ENSMUST00000174830.2
CDS CAA 90 bp	TTGATCAAGAGATTAGTACAGACTTGGACAGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGTTGGCTGTATCCATTATGGCCCCAG	+
Preference number: 6 (lower is better) Translates to: LIKRLVQTWTGAMPW*VVPFPSWLYPLWPQ Trigger: CTGGGGCCATAATGGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTCTTGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000173547.8 ENSMUST00000174830.2
CDS CAA 90 bp	CTGCTTGATCAAGAGATTAGTACAGACTTGGACAGGAGCAATGCCTaGGTTGGTGGTCCCATTTCCCAGTTGGCTGTATCCATTATGGCC	+
Preference number: 6 (lower is better) Translates to: LLDQEISTDLDRSNA*VGGPISQLAVSIMA Trigger: GGCCATAATGGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTCTTGATCAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000173547.8 ENSMUST00000174830.2
CDS CCA 72 bp	AAGAGATTAGTACAGACTTGGACAGGAGCAATGCCTTaGTTGGTGGTCCCATTTCCCAGTTGGCTGTATCCA	+
Preference number: 6 (lower is better) Translates to: KRLVQTWTGAMP*LVVPFPSWLYP Trigger: TGGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000172810.2 ENSMUST00000173547.8 ENSMUST00000174009.8 ENSMUST00000174830.2
CDS CAA 90 bp	ACAAGCTACTTCAATCACCTGCTTGATCAAGAGATTAGTACAGACTaGGACAGGAGCAATGCCTTGGTTGGTGGTCCCATTTCCCAGTTG	+
Preference number: 6 (lower is better) Translates to: TSYFNHLLDQEISTD*DRSNALVGGPISQL Trigger: CAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCTCTTGATCAAGCAGGTGATTGAAGTAGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000173547.8 ENSMUST00000174830.2
CDS CAA 72 bp	AGATTAGTACAGACTTGGACAGGAGCAATGCCTTGGTaGGTGGTCCCATTTCCCAGTTGGCTGTATCCATTA	+
Preference number: 6 (lower is better) Translates to: RLVQTWTGAMPW*VVPFPSWLYPL Trigger: TAATGGATACAGCCAACTGGGAAATGGGACCACCAACCAAGGCATTGCTCCTGTCCAAGTCTGTACTAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000172810.2 ENSMUST00000173547.8 ENSMUST00000174009.8 ENSMUST00000174830.2
CDS GCA 72 bp	TTCCACACAAAGCTTCTAGTTTCTTGGGCACCAGAGTaGTCTGGTTATCTCCAGTTCCTAGACAGTTACTGT	+
Preference number: 6 (lower is better) Translates to: FHTKLLVSWAPE*SGYLQFLDSYC Trigger: ACAGTAACTGTCTAGGAACTGGAGATAACCAGAGCACTCTGGTGCCCAAGAAACTAGAAGCTTTGTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022551.14 ENSMUST00000043227.13 ENSMUST00000173547.8

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