Pregenerated sensors for RCAN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059713Ensembl transcript IDs: ENSMUST00000030606.14, ENSMUST00000132654.8, ENSMUST00000156635.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACAGCAGCTGTGTGCCTGCATCCAGTCAACTGGGAAGACCCACTaGGGCCTGGCGTTTGAGACCAACCTGGGCCACACTGAGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: LQQLCACIQSTGKTH*GLAFETNLGHTELS Trigger: TGACAGCTCAGTGTGGCCCAGGTTGGTCTCAAACGCCAGGCCTCAGTGGGTCTTCCCAGTTGACTGGATGCAGGCACACAGCTGCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | AGCTGTGTGCCTGCATCCAGTCAACTGGGAAGACCCACTGAGGCCTaGCGTTTGAGACCAACCTGGGCCACACTGAGCTGTCACCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SCVPASSQLGRPTEA*RLRPTWATLSCHLK Trigger: TTTGAGGTGACAGCTCAGTGTGGCCCAGGTTGGTCTCAAACGCCAGGCCTCAGTGGGTCTTCCCAGTTGACTGGATGCAGGCACACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | TGGACACCCAGGAATCCCCTTGTTTTTAGACAGGGTCTCGGTACATaGCCCAGGCTGGCCTTAAGCTTGCCAAGCCCTGGTACCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: WTPRNPLVFRQGLGT*PRLALSLPSPGTSA Trigger: GGCAGAGGTACCAGGGCTTGGCAAGCTTAAGGCCAGCCTGGGCCATGTACCGAGACCCTGTCTAAAAACAAGGGGATTCCTGGGTGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 90 bp | GGGAAGGAATACGGCACGTTCCCAGCCGTGGACAAGATGCACAGTTaGTGTTATCTGTCCCTGGGATACCTGGACACCCAGGAATCCCCT | + |
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Preference number: 1 (lower is better) Translates to: GKEYGTFPAVDKMHS*CYLSLGYLDTQESP Trigger: AGGGGATTCCTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTATTCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 90 bp | AGATACTCAGAGGCTGACAGCAGAGGGCACAGCACGGCACAGGACTaGGACCTGTGGTCCCTTAGTCCTCAATTGGACTTAGGAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: RYSEADSRGHSTAQD*DLWSLSPQLDLGRG Trigger: CCCTCTTCCTAAGTCCAATTGAGGACTAAGGGACCACAGGTCTCAGTCCTGTGCCGTGCTGTGCCCTCTGCTGTCAGCCTCTGAGTATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 90 bp | AAACCACAGGGAAGGAATACGGCACGTTCCCAGCCGTGGACAAGATaGACAGTTGCTGTTATCTGTCCCTGGGATACCTGGACACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: KPQGRNTARSQPWTR*TVAVICPWDTWTPR Trigger: CCTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTATTCCTTCCCTGTGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 90 bp | CTGTGTCATAAACGCACATCCGGTCAGGTCAGGCCATGTGGGACCTaGAAGGGTCTCGGGACCCACTTCAAGAACTGCAGGTTTCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LCHKRTSGQVRPCGT*KGLGTHFKNCRFPR Trigger: TCTTGGAAACCTGCAGTTCTTGAAGTGGGTCCCGAGACCCTTGCAGGTCCCACATGGCCTGACCTGACCGGATGTGCGTTTATGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | CGTTCCCAGCCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTaGGATACCTGGACACCCAGGAATCCCCTTGTTTTTAGACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RSQPWTRCTVAVICP*DTWTPRNPLVFRQG Trigger: ACCCTGTCTAAAAACAAGGGGATTCCTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | CCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTGGGATACCTaGACACCCAGGAATCCCCTTGTTTTTAGACAGGGTCTCGGTACA | + |
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Preference number: 1 (lower is better) Translates to: PWTRCTVAVICPWDT*TPRNPLVFRQGLGT Trigger: TGTACCGAGACCCTGTCTAAAAACAAGGGGATTCCTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 90 bp | ATGGCAGTGCACTGGGTGACTCTAGTTCTGGCCTGTGGTACCCAATaGTCTACAGGTTCAAGGGAACTAATATTTCTGGGGGAGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: MAVHWVTLVLACGTQ*STGSRELIFLGEET Trigger: TGTCTCCTCCCCCAGAAATATTAGTTCCCTTGAACCTGTAGAGCATTGGGTACCACAGGCCAGAACTAGAGTCACCCAGTGCACTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 90 bp | GTGAGAACACACTTGCTGGCAGCTAGGGTCTACCTTACAATCAAATaGAGTACACTGCCGAGCTCAGCACTGCAAAGCACTGTAAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: VRTHLLAARVYLTIK*STLPSSALQSTVSQ Trigger: TTGGCTTACAGTGCTTTGCAGTGCTGAGCTCGGCAGTGTACTTCATTTGATTGTAAGGTAGACCCTAGCTGCCAGCAAGTGTGTTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | TCACTTAAAGTGCCATTGAGAATACTGTTCAGAATTTCAAACAGCTaGCCGAATCTGCTACTTCACCCCACGTTCTGGCCTGGGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SLKVPLRILFRISNS*PNLLLHPTFWPGEA Trigger: AGCCTCCCCAGGCCAGAACGTGGGGTGAAGTAGCAGATTCGGCCAGCTGTTTGAAATTCTGAACAGTATTCTCAATGGCACTTTAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | GGTTCAAGGGAACTAATATTTCTGGGGGAGGAGACAGGTGCCACATaGTCAGGGCTAACCTTGTCACTTAAAGTGCCATTGAGAATACTG | + |
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Preference number: 1 (lower is better) Translates to: GSRELIFLGEETGAT*SGLTLSLKVPLRIL Trigger: CAGTATTCTCAATGGCACTTTAAGTGACAAGGTTAGCCCTGACCATGTGGCACCTGTCTCCTCCCCCAGAAATATTAGTTCCCTTGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 90 bp | GAGAACGTGTACTGTATAACGGGGAACACACAAACTCCCCAACTGTaGGAACACACTTGCTGGCAGCTAGGGTCTACCTTACAATCAAAT | + |
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Preference number: 1 (lower is better) Translates to: ENVYCITGNTQTPQL*EHTCWQLGSTLQSN Trigger: ATTTGATTGTAAGGTAGACCCTAGCTGCCAGCAAGTGTGTTCTCACAGTTGGGGAGTTTGTGTGTTCCCCGTTATACAGTACACGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 90 bp | CTGAGAGGGATGGCTTTTCTGGAGAACACACTCTTGAAGGGAGTTTaGAACACCAACAGTCATTTGTCATGTGGTTGCTCAAGGTTCATA | + |
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Preference number: 1 (lower is better) Translates to: LRGMAFLENTLLKGV*NTNSHLSCGCSRFI Trigger: TATGAACCTTGAGCAACCACATGACAAATGACTGTTGGTGTTTCAAACTCCCTTCAAGAGTGTGTTCTCCAGAAAAGCCATCCCTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | GAAACCGTAAGACTAATTTTTAAATCTGTAAAAATGGCAGTGCACTaGGTGACTCTAGTTCTGGCCTGTGGTACCCAATGCTCTACAGGT | + |
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Preference number: 1 (lower is better) Translates to: ETVRLIFKSVKMAVH*VTLVLACGTQCSTG Trigger: ACCTGTAGAGCATTGGGTACCACAGGCCAGAACTAGAGTCACCCAGTGCACTGCCATTTTTACAGATTTAAAAATTAGTCTTACGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 90 bp | TGTGTGTACTTAAGTTTGTGTAGAATGAGTCCAGAACAGACTTCTTaGCTAGAAGTAAATATTTTCCCAGTTGCTCTGTACTGTCACACC | + |
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Preference number: 1 (lower is better) Translates to: CVYLSLCRMSPEQTS*LEVNIFPVALYCHT Trigger: GGTGTGACAGTACAGAGCAACTGGGAAAATATTTACTTCTAGCCAAGAAGTCTGTTCTGGACTCATTCTACACAAACTTAAGTACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCCCCCACGTTCTGGCCTaGGGAGGCTGGCCCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: VFRVTVCLCHLLTGQGMFPHVLA*GGWPNC Trigger: GCAGTTGGGCCAGCCTCCCCAGGCCAGAACGTGGGG...GAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | AGGGAAGGAATACGGCACGTTCCCAGCCGTGGACAAGATGCACAGTaGCTGTTATCTGTCCCTGGGATACCTGGACACCCAGGAATCCCC | + |
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Preference number: 2 (lower is better) Translates to: REGIRHVPSRGQDAQ*LLSVPGIPGHPGIP Trigger: GGGGATTCCTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTATTCCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGGACTCAGCCCTAACATGTCACGCAAAGTACACGGCTCTCATGGCTTCCTGGCCTGGGGAGGCTaGCCCAACTGCCTGACGGAT | + |
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Preference number: 2 (lower is better) Translates to: TKGLSPNMSRKVHGSHGFLAWGG*PNCLTD Trigger: ATCCGTCAGGCAGTTGGGCCAGCCTCCCCAGGCCAG...GAAGCCATGAGAGCCGTGTACTTTGCGTGACATGTTAGGGCTGAGTCCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCACTCTGAGAGGGATGGCTTTTCTGGAGAACACACTCTTGAAGGGAGTTCTTCACCCCACGTTCTaGCCTGGGGAGGCTGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SGTLRGMAFLENTLLKGVLHPTF*PGEAGP Trigger: TGGGCCAGCCTCCCCAGGCCAGAACGTGGGGTGAAG...AACTCCCTTCAAGAGTGTGTTCTCCAGAAAAGCCATCCCTCTCAGAGTGCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | GCACGTTCCCAGCCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTGGGATAAGCTTGCCAAGCCCTaGTACCTCTGCCTCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: ARSQPWTRCTVAVICPWDKLAKP*YLCLPS Trigger: GCTTGGGAGGCAGAGGTACCAGGGCTTGGCAAGCTT...ATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | GTTCTATGCCCAGCCCCTTCACCTAGGCCAGCCAGCTCTGAATACTaGATGAGTGGAGCAGCTGATGTACCTGTAGCCCAGCACTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLCPAPSPRPASSEY*MSGAADVPVAQHSK Trigger: CTTTGAGTGCTGGGCTACAGGTACATCAGCTGCTCCACTCATCAAGTATTCAGAGCTGGCTGGCCTAGGTGAAGGGGCTGGGCATAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR TCA 90 bp | TTGTTACAGGTAATCACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCACTGGGAAGACCCACTaGGGCCTGGCGTTTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: LLQVITSVFRVTVCLCHLTGKTH*GLAFET Trigger: GGTCTCAAACGCCAGGCCTCAGTGGGTCTTCCCAGT...GAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTGATTACCTGTAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCACCACTGTCACTGACTaGCAAGAGAGGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VFRVTVCLCHLLTGQGMFTTVTD*QERQDR Trigger: TCTGTCCTGCCTCTCTTGGCAGTCAGTGACAGTGGT...GAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | TTCAGCATTCCACAGGACCTGAAGGCAAGGGACACTCTCCTGTTCTaGTCAGGTATGGTGGCACACACCCTCAGTCCTAGCACTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: FSIPQDLKARDTLLF*SGMVAHTLSPSTYE Trigger: CTCATAAGTGCTAGGACTGAGGGTGTGTGCCACCATACCTGACAAGAACAGGAGAGTGTCCCTTGCCTTCAGGTCCTGTGGAATGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR TCA 90 bp | GATTACAGCAGCTGTGTGCCTGCATCCAGTCAACTGGGAAGACCCACTGAGGCCCACGATATCTGGATCTaGCAATCTCAGTCATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: DYSSCVPASSQLGRPTEAHDIWI*QSQSFG Trigger: GCCAAATGACTGAGATTGTCAGATCCAGATATCGTG...GGCCTCAGTGGGTCTTCCCAGTTGACTGGATGCAGGCACACAGCTGCTGTAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR GCA 90 bp | GAATGGAAAACTTTGAAATGTGTGGTGCTCACCCCTCTAATTCCAGCACTTGGGGGGGGAGGAGACAGGTaGCACATGGTCAGGGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: EWKTLKCVVLTPLIPALGGGGDR*HMVRAN Trigger: GTTAGCCCTGACCATGTGGCACCTGTCTCCTCCCCC...CCCAAGTGCTGGAATTAGAGGGGTGAGCACCACACATTTCAAAGTTTTCCATTC 52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | TTGAGACCAACCTGGGCCACACTGAGCTGTCACCTCAAAACCAAACTCACTTTAGGTGACACATCCCACTaGCAAAGGGAGATTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LRPTWATLSCHLKTKLTLGDTSH*QREIPP Trigger: TGGAGGAATCTCCCTTTGCCAGTGGGATGTGTCACC...TAAAGTGAGTTTGGTTTTGAGGTGACAGCTCAGTGTGGCCCAGGTTGGTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | TTGTTACAGGTAATCACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCATGCTGAGTGACCTATaGAGGCCCCAACAACACATC | + |
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Preference number: 2 (lower is better) Translates to: LLQVITSVFRVTVCLCHLMLSDL*RPQQHI Trigger: GATGTGTTGTTGGGGCCTCCATAGGTCACTCAGCAT...GAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTGATTACCTGTAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR CCA 90 bp | TTGAGACCAACCTGGGCCACACTGAGCTGTCACCTCAAAACCAAACTCACTTTATCTTGTCAGGTATGGTaGCACACACCCTCAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LRPTWATLSCHLKTKLTLSCQVW*HTPSVL Trigger: TAGGACTGAGGGTGTGTGCCACCATACCTGACAAGA...TAAAGTGAGTTTGGTTTTGAGGTGACAGCTCAGTGTGGCCCAGGTTGGTCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | ACACGGCTCTCATGGCTTCATTTCTCTACGTTCTTTTCTTTGCAGTaGCAGCTATGTTCCTCTCTGTTCTATGCCCAGCCCCTTCACCTA | + |
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Preference number: 2 (lower is better) Translates to: TRLSWLHFSTFFSLQ*QLCSSLFYAQPLHL Trigger: TAGGTGAAGGGGCTGGGCATAGAACAGAGAGGAACATAGCTGCAACTGCAAAGAAAAGAACGTAGAGAAATGAAGCCATGAGAGCCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR TCA 90 bp | TTGAGACCAACCTGGGCCACACTGAGCTGTCACCTCAAAACCAAACTCACTTTAGGGGGAAAGGACAGGTaGTTTTTCTTTCTGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LRPTWATLSCHLKTKLTLGGKDR*FFFLNS Trigger: GCTGTTCAGAAAGAAAAATCACCTGTCCTTTCCCCC...TAAAGTGAGTTTGGTTTTGAGGTGACAGCTCAGTGTGGCCCAGGTTGGTCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | ACAGGTGCCACATGGTCAGGGCTAACCTTGTCACTTAAAGTGCCATaGAGAATACTGTTCAGAATTTCAAACAGCTGGCCGAATCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: TGATWSGLTLSLKVP*RILFRISNSWPNLL Trigger: TAGCAGATTCGGCCAGCTGTTTGAAATTCTGAACAGTATTCTCAATGGCACTTTAAGTGACAAGGTTAGCCCTGACCATGTGGCACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | TCTGAGAGGGATGGCTTTTCTGGAGAACACACTCTTGAAGGGAGTTaGAAACACCAACAGTCATTTGTCATGTGGTTGCTCAAGGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SERDGFSGEHTLEGS*KHQQSFVMWLLKVH Trigger: ATGAACCTTGAGCAACCACATGACAAATGACTGTTGGTGTTTCAAACTCCCTTCAAGAGTGTGTTCTCCAGAAAAGCCATCCCTCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 90 bp | ACAAAGTCTTATCATTATCTTCTAAAGTTAAGACGACTAACGTCCTaGATTACACGCACAGCACAGGAAACCTCAAGCAGTAGCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: TKSYHYLLKLRRLTS*ITRTAQETSSSSRP Trigger: CGGCCTGCTACTGCTTGAGGTTTCCTGTGCTGTGCGTGTAATCAAGGACGTTAGTCGTCTTAACTTTAGAAGATAATGATAAGACTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR-3UTR GCA 90 bp | ACACCAAGAAAAAGGAAAAACCTTATTCTGAGACGGTTTAACTCATGTAGCCCATCTTTTCTTTGCAGTTaGAGCTATGTTCCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TPRKRKNLILRRFNSCSPSFLCS*SYVPLC Trigger: ACAGAGAGGAACATAGCTGCAACTGCAAAGAAAAGA...TGGGCTACATGAGTTAAACCGTCTCAGAATAAGGTTTTTCCTTTTTCTTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 72 bp | TACATGGCCCAGGCTGGCCTTAAGCTTGCCAAGCCCTaGTACCTCTGCCTCCCAAGCGCTGAGAGGACAGCC | + |
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Preference number: 3 (lower is better) Translates to: YMAQAGLKLAKP*YLCLPSAERTA Trigger: GGCTGTCCTCTCAGCGCTTGGGAGGCAGAGGTACCAGGGCTTGGCAAGCTTAAGGCCAGCCTGGGCCATGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 72 bp | CTGTGTGCCTGCATCCAGTCAACTGGGAAGACCCACTaGGGCCTGGCGTTTGAGACCAACCTGGGCCACACT | + |
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Preference number: 3 (lower is better) Translates to: LCACIQSTGKTH*GLAFETNLGHT Trigger: AGTGTGGCCCAGGTTGGTCTCAAACGCCAGGCCTCAGTGGGTCTTCCCAGTTGACTGGATGCAGGCACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 72 bp | AAACGCACATCCGGTCAGGTCAGGCCATGTGGGACCTaGAAGGGTCTCGGGACCCACTTCAAGAACTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KRTSGQVRPCGT*KGLGTHFKNCR Trigger: CCTGCAGTTCTTGAAGTGGGTCCCGAGACCCTTGCAGGTCCCACATGGCCTGACCTGACCGGATGTGCGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 72 bp | CCTGCATCCAGTCAACTGGGAAGACCCACTGAGGCCTaGCGTTTGAGACCAACCTGGGCCACACTGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PASSQLGRPTEA*RLRPTWATLSC Trigger: ACAGCTCAGTGTGGCCCAGGTTGGTCTCAAACGCCAGGCCTCAGTGGGTCTTCCCAGTTGACTGGATGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 72 bp | GCTTGCCAAGCCCTGGTACCTCTGCCTCCCAAGCGCTaGGAGGACAGCCTATGTCACTGTGCTGAATACACG | + |
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Preference number: 3 (lower is better) Translates to: ACQALVPLPPKR*EDSLCHCAEYT Trigger: CGTGTATTCAGCACAGTGACATAGGCTGTCCTCTCAGCGCTTGGGAGGCAGAGGTACCAGGGCTTGGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR TCA 72 bp | GAGGCTGACAGCAGAGGGCACAGCACGGCACAGGACTaGGACCTGTGGTCCCTTAGTCCTCAATTGGACTTA | + |
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Preference number: 3 (lower is better) Translates to: EADSRGHSTAQD*DLWSLSPQLDL Trigger: TAAGTCCAATTGAGGACTAAGGGACCACAGGTCTCAGTCCTGTGCCGTGCTGTGCCCTCTGCTGTCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 72 bp | TACGGCACGTTCCCAGCCGTGGACAAGATGCACAGTTaGTGTTATCTGTCCCTGGGATACCTGGACACCCAG | + |
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Preference number: 3 (lower is better) Translates to: YGTFPAVDKMHS*CYLSLGYLDTQ Trigger: CTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 72 bp | GGAAGACCCACTGAGGCCTGGCGTTTGAGACCAACCTaGGCCACACTGAGCTGTCACCTCAAAACCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: GRPTEAWRLRPT*ATLSCHLKTKL Trigger: GAGTTTGGTTTTGAGGTGACAGCTCAGTGTGGCCCAGGTTGGTCTCAAACGCCAGGCCTCAGTGGGTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 72 bp | GGAAGGAATACGGCACGTTCCCAGCCGTGGACAAGATaGACAGTTGCTGTTATCTGTCCCTGGGATACCTGG | + |
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Preference number: 3 (lower is better) Translates to: GRNTARSQPWTR*TVAVICPWDTW Trigger: CCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTATTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR GCA 72 bp | GGGACCTGCAAGGGTCTCGGGACCCACTTCAAGAACTaGAGGTTTCCAAGAGAAAGCACTAACCCGAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: GTCKGLGTHFKN*RFPRESTNPSE Trigger: CTCACTCGGGTTAGTGCTTTCTCTTGGAAACCTGCAGTTCTTGAAGTGGGTCCCGAGACCCTTGCAGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CCA 72 bp | AGGAATCCCCTTGTTTTTAGACAGGGTCTCGGTACATaGCCCAGGCTGGCCTTAAGCTTGCCAAGCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RNPLVFRQGLGT*PRLALSLPSPG Trigger: ACCAGGGCTTGGCAAGCTTAAGGCCAGCCTGGGCCATGTACCGAGACCCTGTCTAAAAACAAGGGGATTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR-3UTR CAA 90 bp | GCACGTTCCCAGCCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTGGGATACTGTGAGAACACACTaGCTGGCAGCTAGGGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: ARSQPWTRCTVAVICPWDTVRTH*LAARVY Trigger: GTAGACCCTAGCTGCCAGCAAGTGTGTTCTCACAGT...ATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR GCA 72 bp | TGTACCTGTAGCCCAGCACTCAAAGGCAGGAAAGTCTaGAAGGGACCAGTGATGCTGAGTGACCTATGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTCSPALKGRKV*KGPVMLSDLWR Trigger: CCTCCATAGGTCACTCAGCATCACTGGTCCCTTGCAGACTTTCCTGCCTTTGAGTGCTGGGCTACAGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | GAGACAGAGGCAGGAGGAGCAGTTCAGGGTCATCCTTaGGACACAGCAAGTTTGAGGTCAACCTGGACTACA | + |
|
Preference number: 3 (lower is better) Translates to: ETEAGGAVQGHP*DTASLRSTWTT Trigger: TGTAGTCCAGGTTGACCTCAAACTTGCTGTGTCCCAAGGATGACCCTGAACTGCTCCTCCTGCCTCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | AAACCACAGGGAAGGAATACGGCACGTTCCCAGCCGTaGACAAGATGCACAGTTGCTGTTATCTGTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KPQGRNTARSQP*TRCTVAVICPW Trigger: CCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTATTCCTTCCCTGTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | AACAAGCCCATGCCTACAATCCAAACAAACAGAGCCTaGGGAAAGAGAGTGGTCTGGGCCTCAAGGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NKPMPTIQTNRA*GKRVVWASRPA Trigger: AGCTGGCCTTGAGGCCCAGACCACTCTCTTTCCTCAGGCTCTGTTTGTTTGGATTGTAGGCATGGGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR GCA 72 bp | TTCTTTGCAGTTGCAGCTATGTTCCTCTCTGTTCTATaGCCAGCCCCTTCACCTAGGCCAGCCAGCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FFAVAAMFLSVL*PAPSPRPASSE Trigger: TTCAGAGCTGGCTGGCCTAGGTGAAGGGGCTGGGCATAGAACAGAGAGGAACATAGCTGCAACTGCAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR GCA 72 bp | GAGGGAGAGGGACATTCCGTAGAACCTTTAACTCCATaGATCCTTTGTGCCTGGCTCCGCTCTCACTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: EGEGHSVEPLTP*ILCAWLRSHYC Trigger: ACAGTAGTGAGAGCGGAGCCAGGCACAAAGGATGCATGGAGTTAAAGGTTCTACGGAATGTCCCTCTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | AGGCAAGGGACACTCTCCTGTTCTTGTCAGGTATGGTaGCACACACCCTCAGTCCTAGCACTTATGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RQGTLSCSCQVW*HTPSVLALMRQ Trigger: CTGTCTCATAAGTGCTAGGACTGAGGGTGTGTGCCACCATACCTGACAAGAACAGGAGAGTGTCCCTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | TCTGGGCCTCAAGGCCAGCTTGGGCTACATAATGAGTaGCAGGCTAGCATGAGCTACAGCGTGAAACCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SGPQGQLGLHNE*QASMSYSVKPY Trigger: ATAAGGTTTCACGCTGTAGCTCATGCTAGCCTGTCACTCATTATGTAGCCCAAGCTGGCCTTGAGGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCCAGGACACAGGACAGTaGAAGCTGATAATGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VFRVTVCLCHLLTGQGMFQDTGQ*KLIMNC Trigger: ACAGTTCATTATCAGCTTCAACTGTCCTGTGTCCTG...GAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
||
| 3UTR GCA 72 bp | CACTGGGTGACTCTAGTTCTGGCCTGTGGTACCCAATaGTCTACAGGTTCAAGGGAACTAATATTTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HWVTLVLACGTQ*STGSRELIFLG Trigger: CCCCAGAAATATTAGTTCCCTTGAACCTGTAGAGCATTGGGTACCACAGGCCAGAACTAGAGTCACCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | AGATGCACAGTTGCTGTTATCTGTCCCTGGGATACCTaGACACCCAGGAATCCCCTTGTTTTTAGACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RCTVAVICPWDT*TPRNPLVFRQG Trigger: ACCCTGTCTAAAAACAAGGGGATTCCTGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | TACTGTATAACGGGGAACACACAAACTCCCCAACTGTaGGAACACACTTGCTGGCAGCTAGGGTCTACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YCITGNTQTPQL*EHTCWQLGSTL Trigger: TAAGGTAGACCCTAGCTGCCAGCAAGTGTGTTCTCACAGTTGGGGAGTTTGTGTGTTCCCCGTTATACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | GTGCCATTGAGAATACTGTTCAGAATTTCAAACAGCTaGCCGAATCTGCTACTTCACCCCACGTTCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VPLRILFRISNS*PNLLLHPTFWP Trigger: AGGCCAGAACGTGGGGTGAAGTAGCAGATTCGGCCAGCTGTTTGAAATTCTGAACAGTATTCTCAATGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | GAACTAATATTTCTGGGGGAGGAGACAGGTGCCACATaGTCAGGGCTAACCTTGTCACTTAAAGTGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ELIFLGEETGAT*SGLTLSLKVPL Trigger: CAATGGCACTTTAAGTGACAAGGTTAGCCCTGACCATGTGGCACCTGTCTCCTCCCCCAGAAATATTAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGGACTCAGCCCTAACATGTCACGCAAAGTACACGGCTCTCATGGCTTCTTCTTTTCTTTGCAGTaGCAGCTATGTTCCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TKGLSPNMSRKVHGSHGFFFSLQ*QLCSSL Trigger: CAGAGAGGAACATAGCTGCAACTGCAAAGAAAAGAA...GAAGCCATGAGAGCCGTGTACTTTGCGTGACATGTTAGGGCTGAGTCCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR GCA 72 bp | TTAATCCAGCTGCAGGTTCAGTTGTGGGGATCAATGTaGAACAGCTGTGAATGCGTTCTCACACGTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LIQLQVQLWGSM*NSCECVLTRQR Trigger: TCTTTGACGTGTGAGAACGCATTCACAGCTGTTGCACATTGATCCCCACAACTGAACCTGCAGCTGGATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | AGAGCTAAGAGCACATCTGCCCACGATATCTGGATCTaGCAATCTCAGTCATTTGGCCTTTCATCCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RAKSTSAHDIWI*QSQSFGLSSSK Trigger: CTTTGAGGATGAAAGGCCAAATGACTGAGATTGTCAGATCCAGATATCGTGGGCAGATGTGCTCTTAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | AGCACTGCAAAGCACTGTAAGCCAAGGATGAACTCTTaGTCTACTGCATTCGCCTCCAAAGTCTCAGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: STAKHCKPRMNS*STAFASKVSGL Trigger: TAATCCTGAGACTTTGGAGGCGAATGCAGTAGATCAAGAGTTCATCCTTGGCTTACAGTGCTTTGCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR GCA 72 bp | AATGCACCTGTGTGCGTGTGTTTGTGTGTGAGCTCATaGATGCACGCTCATGAAATCAATCCTACCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NAPVCVCLCVSS*MHAHEINPTTK Trigger: TTTTGTGGTAGGATTGATTTCATGAGCGTGCATGCATGAGCTCACACACAAACACACGCACACAGGTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | TCAGGACACAGGACAGTTGAAGCTGATAATGAACTGTaGCCCATCAGATCAACGATACTGAAATCACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGHRTVEADNEL*PIRSTILKSQD Trigger: GTCCTGTGATTTCAGTATCGTTGATCTGATGGGCCACAGTTCATTATCAGCTTCAACTGTCCTGTGTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | TCCGTAGAACCTTTAACTCCATGCATCCTTTGTGCCTaGCTCCGCTCTCACTACTGTTTACATTTTAACATG | + |
|
Preference number: 3 (lower is better) Translates to: SVEPLTPCILCA*LRSHYCLHFNM Trigger: CATGTTAAAATGTAAACAGTAGTGAGAGCGGAGCCAGGCACAAAGGATGCATGGAGTTAAAGGTTCTACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | ATGGCTTTTCTGGAGAACACACTCTTGAAGGGAGTTTaGAACACCAACAGTCATTTGTCATGTGGTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MAFLENTLLKGV*NTNSHLSCGCS Trigger: TGAGCAACCACATGACAAATGACTGTTGGTGTTTCAAACTCCCTTCAAGAGTGTGTTCTCCAGAAAAGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | AGACTAATTTTTAAATCTGTAAAAATGGCAGTGCACTaGGTGACTCTAGTTCTGGCCTGTGGTACCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: RLIFKSVKMAVH*VTLVLACGTQC Trigger: GCATTGGGTACCACAGGCCAGAACTAGAGTCACCCAGTGCACTGCCATTTTTACAGATTTAAAAATTAGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | GAAGGGAGTTTGAAACACCAACAGTCATTTGTCATGTaGTTGCTCAAGGTTCATACATCGTACTCTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EGSLKHQQSFVM*LLKVHTSYSLC Trigger: ACAGAGAGAGTACGATGTATGAACCTTGAGCAACCACATGACAAATGACTGTTGGTGTTTCAAACTCCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR TCA 72 bp | AACAACACATCTTCAAGTGTAAGAAGCAATTCTACCTaGGGGCCAACTGCAAGCAAAGGTGGAAATGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: NNTSSSVRSNST*GPTASKGGNDC Trigger: ACAATCATTTCCACCTTTGCTTGCAGTTGGCCCTCAGGTAGAATTGCTTCTTACACTTGAAGATGTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CCA 72 bp | TTAAGTTTGTGTAGAATGAGTCCAGAACAGACTTCTTaGCTAGAAGTAAATATTTTCCCAGTTGCTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLCRMSPEQTS*LEVNIFPVALY Trigger: GTACAGAGCAACTGGGAAAATATTTACTTCTAGCCAAGAAGTCTGTTCTGGACTCATTCTACACAAACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR CCA 90 bp | GCACGTTCCCAGCCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTGGGATCCACCACACTGGGGGTaGACTCGGTTCCCGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSQPWTRCTVAVICPWDPPHWG*TRFPRA Trigger: TGCACGCGGGAACCGAGTCCACCCCCAGTGTGGTGG...ATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTCGTGCACCACCACACTaGGGGTGGACTCGGTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSSGSQSASVTSLQDKECRAPPH*GWTRFP Trigger: CGGGAACCGAGTCCACCCCCAGTGTGGTGGTGCACG...ACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | GCACGTTCCCAGCCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTGGGATTCGCTCTCACAGACGTaGACCACCACACTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARSQPWTRCTVAVICPWDSLSQT*TTTLGV Trigger: CACCCCCAGTGTGGTGGTGCACGTCTGTGAGAGCGA...ATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | CACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGGGGGAGATGAGGAACTaGTTGGTGGGTTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKCLPGHSLPLSPPYRTRGEMRN*LVGCGG Trigger: GCCACCACAACCCACCAAGCAGTTCCTCATCTCCCC...CCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
||
| 3UTR CAA 72 bp | CCACAGGACCTGAAGGCAAGGGACACTCTCCTGTTCTaGTCAGGTATGGTGGCACACACCCTCAGTCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQDLKARDTLLF*SGMVAHTLSPS Trigger: GCTAGGACTGAGGGTGTGTGCCACCATACCTGACAAGAACAGGAGAGTGTCCCTTGCCTTCAGGTCCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CAA 72 bp | TCTGTCCCTGGGATACCTGGACACCCAGGAATCCCCTaGTTTTTAGACAGGGTCTCGGTACATGGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVPGIPGHPGIP*FLDRVSVHGPG Trigger: GCCTGGGCCATGTACCGAGACCCTGTCTAAAAACAAGGGGATTCCTGGGTGTCCAGGTATCCCAGGGACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | TCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAAGCCTCAGGACACCCTCCTCCTGGTCGCTaGTACAGAGGTCTGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SASVTSLQDKECSKASGHPPPGR*YRGLTG Trigger: GCCAGTCAGACCTCTGTAGCAGCGACCAGGAGGAGG...GTGTCCTGAGGCTTTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | CAAGAGAGGCAGGACAGACGGACAGCCAGGAGAGCTAAGAGCACATCTGCCCACGGACACCTGCACCTGTaGGAAGTAAAGCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QERQDRRTARRAKSTSAHGHLHL*EVKLQL Trigger: AAGCTGAAGCTTTACTTCGCACAGGTGCAGGTGTCC...GTGGGCAGATGTGCTCTTAGCTCTCCTGGCTGTCCGTCTGTCCTGCCTCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | CACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGTCCGGGCGCCGCGTCTaGGTGATTTTCTGTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKCLPGHSLPLSPPYRTRSGRRV*VIFCFG Trigger: TCCAAAACAGAAAATCACGCAGACGCGGCGCCCGGA...CCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| 3UTR CAA 72 bp | ATACGGCACGTTCCCAGCCGTGGACAAGATGCACAGTaGCTGTTATCTGTCCCTGGGATACCTGGACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRHVPSRGQDAQ*LLSVPGIPGHP Trigger: TGGGTGTCCAGGTATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGCCGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAGGGGAGATGAGGAACTaGTTGGTGGGTTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRVTVCLCHLLTGQGMFEGEMRN*LVGCGG Trigger: GCCACCACAACCCACCAAGCAGTTCCTCATCTCCCC...TTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGTATTTCTCCCCTaGGCCCAGCTTGGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFRVTVCLCHLLTGQGMFVFLP*AQLGDS Trigger: GCTGTCTCCAAGCTGGGCCCAGGGGAGAAATACGAA...CATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAAGCCTCAGGACACAGATACTGGGCCCAGCTTaGAGACAGCGCAGAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCHLLTGQGMFESLRTQILGPA*RQRRAG Trigger: ACCTGCTCTGCGCTGTCTCCAAGCTGGGCCCAGTAT...CTGTGTCCTGAGGCTTTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132654.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAAGCCTCAGGACACAGTCCTCTTCCTCCTCCTaGTCGCTGCTACAGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLCHLLTGQGMFESLRTQSSSSS*SLLQRS Trigger: AGACCTCTGTAGCAGCGACCAGGAGGAGGAAGAGGA...CTGTGTCCTGAGGCTTTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | GGTAATCACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGCTGCTTCATGGACACTaGAAGCAAAGAGTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNHKCLPGHSLPLSPPYRLLHGH*KQRVRW Trigger: CCACCTCACTCTTTGCTTGCAGTGTCCATGAAGCAG...CCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTGATTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | GCACGTTCCCAGCCGTGGACAAGATGCACAGTTGCTGTTATCTGTCCCTGGGATTTGGACCTCAAACACTaGTTCATGGACACTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARSQPWTRCTVAVICPWDLDLKH*FMDTAS Trigger: GCTTGCAGTGTCCATGAAGCAGTGTTTGAGGTCCAA...ATCCCAGGGACAGATAACAGCAACTGTGCATCTTGTCCACGGCTGGGAACGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR CCA 90 bp | TCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAGCAAAGAGTGAGGTaGGCAGGTCACTTAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGSQSASVTSLQDKECSKQRVR*AGHLGP Trigger: TGGACCTAAGTGACCTGCCCACCTCACTCTTTGCTT...CGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR TCA 90 bp | TTGAGACCAACCTGGGCCACACTGAGCTGTCACCTCAAAACCAAACTCACTTTAGCTGCTACAGAGGTCTaGCTGGCTGTCATTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPTWATLSCHLKTKLTLAATEV*LAVIPR Trigger: TCTTGGAATGACAGCCAGTCAGACCTCTGTAGCAGC...TAAAGTGAGTTTGGTTTTGAGGTGACAGCTCAGTGTGGCCCAGGTTGGTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAATTGGACCTCAAACACTaGTTCATGGACACTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRVTVCLCHLLTGQGMFELDLKH*FMDTAS Trigger: GCTTGCAGTGTCCATGAAGCAGTGTTTGAGGTCCAA...TTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
||
| 3UTR CAA 72 bp | GGGGAGGAGACAGGTGCCACATGGTCAGGGCTAACCTaGTCACTTAAAGTGCCATTGAGAATACTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEETGATWSGLT*SLKVPLRILFR Trigger: TCTGAACAGTATTCTCAATGGCACTTTAAGTGACAAGGTTAGCCCTGACCATGTGGCACCTGTCTCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
||
| CDS-3UTR CCA 90 bp | GTAATCACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACTCTCCTTTTGCTCTTaGACCTCAAACACTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VITSVFRVTVCLCHLLTGLSFCS*TSNTAS Trigger: TGAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAG...TCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTGATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATCTCTCCTTTTGCTCTTaGACCTCAAACACTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCLPGHSLPLSPPYRTRNLSFCS*TSNTAS Trigger: TGAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAG...ATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
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| CDS-3UTR CCA 90 bp | TTGTTACAGGTAATCACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCAAGCTCTTGAACAACTaGAATGTGACCTGGTCATCG | + |
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Preference number: 4 (lower is better) Translates to: LLQVITSVFRVTVCLCHLKLLNN*NVTWSS Trigger: CGATGACCAGGTCACATTCCAGTTGTTCAAGAGCTT...GAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTGATTACCTGTAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
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| 3UTR CAA 72 bp | CGGCTCTCATGGCTTCATTTCTCTACGTTCTTTTCTTaGCAGTTGCAGCTATGTTCCTCTCTGTTCTATGCC | + |
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Preference number: 4 (lower is better) Translates to: RLSWLHFSTFFS*QLQLCSSLFYA Trigger: GGCATAGAACAGAGAGGAACATAGCTGCAACTGCAAAGAAAAGAACGTAGAGAAATGAAGCCATGAGAGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 72 bp | ACAAGGAATGTTCGAAAGCCTCAGGACACAGGACAGTaGAAGCTGATAATGAACTGTGGCCCATCAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: TRNVRKPQDTGQ*KLIMNCGPSDQ Trigger: TTGATCTGATGGGCCACAGTTCATTATCAGCTTCAACTGTCCTGTGTCCTGAGGCTTTCGAACATTCCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 72 bp | GGGAGTTTGAAACACCAACAGTCATTTGTCATGTGGTaGCTCAAGGTTCATACATCGTACTCTCTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GSLKHQQSFVMW*LKVHTSYSLCV Trigger: CACACAGAGAGAGTACGATGTATGAACCTTGAGCAACCACATGACAAATGACTGTTGGTGTTTCAAACTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 72 bp | GATGGCTTTTCTGGAGAACACACTCTTGAAGGGAGTTaGAAACACCAACAGTCATTTGTCATGTGGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: DGFSGEHTLEGS*KHQQSFVMWLL Trigger: GAGCAACCACATGACAAATGACTGTTGGTGTTTCAAACTCCCTTCAAGAGTGTGTTCTCCAGAAAAGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 72 bp | ACCTCAAAACCAAACTCACTTTATCTGACAGATGACTaGGATCTAAAAACCAATGCGGGTGGAATCGTAATC | + |
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Preference number: 4 (lower is better) Translates to: TSKPNSLYLTDD*DLKTNAGGIVI Trigger: GATTACGATTCCACCCGCATTGGTTTTTAGATCCAAGTCATCTGTCAGATAAAGTGAGTTTGGTTTTGAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| 3UTR CAA 72 bp | TCATACATCGTACTCTCTCTGTGTGTGTACTTAAGTTaGTGTAGAATGAGTCCAGAACAGACTTCTTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SYIVLSLCVYLS*CRMSPEQTSWL Trigger: TAGCCAAGAAGTCTGTTCTGGACTCATTCTACACAAACTTAAGTACACACACAGAGAGAGTACGATGTATGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS GCA 90 bp | TCACAGACGTGCACCACCACACTGGGGGTGGACTCGGTTCCCGCGTaGAGTTCGTATTTCTCCCCTGGGCCCAGCTTGGAGACAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SQTCTTTLGVDSVPA*SSYFSPGPSLETAQ Trigger: CTGCGCTGTCTCCAAGCTGGGCCCAGGGGAGAAATACGAACTGCACGCGGGAACCGAGTCCACCCCCAGTGTGGTGGTGCACGTCTGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS CCA 90 bp | CCTCTTCAGTTTCGCTCTCACAGACGTGCACCACCACACTGGGGGTaGACTCGGTTCCCGCGTGCAGTTCGTATTTCTCCCCTGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PLQFRSHRRAPPHWG*TRFPRAVRISPLGP Trigger: TGGGCCCAGGGGAGAAATACGAACTGCACGCGGGAACCGAGTCCACCCCCAGTGTGGTGGTGCACGTCTGTGAGAGCGAAACTGAAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS-3UTR CAA 90 bp | TCACAAGTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGTCCCCTGGGCCCAGCTaGGAGACAGCGCAGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SQVSSGSQSASVTSLQDKSPGPS*ETAQSR Trigger: CCTGCTCTGCGCTGTCTCCAAGCTGGGCCCAGGGGA...CTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACACTTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS-3UTR CAA 90 bp | GTGTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTGATACTGGGCCCAGCTaGGAGACAGCGCAGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VSSGSQSASVTSLQDKECDTGPS*ETAQSR Trigger: CCTGCTCTGCGCTGTCTCCAAGCTGGGCCCAGTATC...ACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132654.8 |
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| CDS-3UTR CAA 90 bp | CGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAAGCGCCGCAGCCTCGGGCTaGCTGAAGTTGATCCTCACT | + |
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Preference number: 5 (lower is better) Translates to: RVTVCLCHLLTGQGMFESAAASG*LKLILT Trigger: AGTGAGGATCAACTTCAGCAAGCCCGAGGCTGCGGC...GCTTTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
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| CDS-3UTR CAA 90 bp | CAAGAGAGGCAGGACAGACGGACAGCCAGGAGAGCTAAGAGCACATCTGCCCACCCTCTCCTTTTGCTCTaGGACCTCAAACACTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: QERQDRRTARRAKSTSAHPLLLL*DLKHCF Trigger: GAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAGG...GTGGGCAGATGTGCTCTTAGCTCTCCTGGCTGTCCGTCTGTCCTGCCTCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS CCA 90 bp | GGACCTCAAACACTGCTTCATGGACACTGCAAGCAAAGAGTGAGGTaGGCAGGTCACTTAGGTCCATCATCTCTTCCAGTCCGTCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: GPQTLLHGHCKQRVR*AGHLGPSSLPVRPH Trigger: ATGAGGACGGACTGGAAGAGATGATGGACCTAAGTGACCTGCCCACCTCACTCTTTGCTTGCAGTGTCCATGAAGCAGTGTTTGAGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000156635.2 |
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| CDS CCA 90 bp | GCCTCAAACCTCTCCTTTTGCTCTTGGACCTCAAACACTGCTTCATaGACACTGCAAGCAAAGAGTGAGGTGGGCAGGTCACTTAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ASNLSFCSWTSNTAS*TLQAKSEVGRSLRS Trigger: GGACCTAAGTGACCTGCCCACCTCACTCTTTGCTTGCAGTGTCCATGAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAGGTTTGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000156635.2 |
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| CDS-3UTR CAA 90 bp | GTCTTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCCCTCTCCTTTTGCTCTaGGACCTCAAACACTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VFRVTVCLCHLLTGQGMFPLLLL*DLKHCF Trigger: GAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAGG...GAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
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| CDS-3UTR CAA 90 bp | GGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAAGCCACTCTGCGAAAGCTCTaGAACAACTGGAATGTGACC | + |
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Preference number: 5 (lower is better) Translates to: GSQSASVTSLQDKECSKATLRKL*NNWNVT Trigger: GGTCACATTCCAGTTGTTCAAGAGCTTTCGCAGAGT...GGCTTTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
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| CDS GCA 90 bp | ACCTCTCCTTTTGCTCTTGGACCTCAAACACTGCTTCATGGACACTaGAAGCAAAGAGTGAGGTGGGCAGGTCACTTAGGTCCATCATCT | + |
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Preference number: 5 (lower is better) Translates to: TSPFALGPQTLLHGH*KQRVRWAGHLGPSS Trigger: AGATGATGGACCTAAGTGACCTGCCCACCTCACTCTTTGCTTGCAGTGTCCATGAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000156635.2 |
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| CDS-3UTR CAA 90 bp | TTCCGGGTCACAGTCTGCCTCTGTCACCTCCTTACAGGACAAGGAATGTTCGAAACTCTGCGAAAGCTCTaGAACAACTGGAATGTGACC | + |
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Preference number: 5 (lower is better) Translates to: FRVTVCLCHLLTGQGMFETLRKL*NNWNVT Trigger: GGTCACATTCCAGTTGTTCAAGAGCTTTCGCAGAGT...TTCGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 |
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| CDS GCA 72 bp | TGCACCACCACACTGGGGGTGGACTCGGTTCCCGCGTaGAGTTCGTATTTCTCCCCTGGGCCCAGCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CTTTLGVDSVPA*SSYFSPGPSLE Trigger: CTCCAAGCTGGGCCCAGGGGAGAAATACGAACTGCACGCGGGAACCGAGTCCACCCCCAGTGTGGTGGTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS GCA 72 bp | GGACTTGTCCCGGGCCTCCCCGGACACCTGCACCTGTaGGAAGTAAAGCTTCAGCTTCCGTCCGTGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: GLVPGLPGHLHL*EVKLQLPSVEL Trigger: GAGTTCCACGGACGGAAGCTGAAGCTTTACTTCGCACAGGTGCAGGTGTCCGGGGAGGCCCGGGACAAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 ENSMUST00000156635.2 |
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| CDS CCA 72 bp | GGACTCGGTTCCCGCGTGCAGTTCGTATTTCTCCCCTaGGCCCAGCTTGGAGACAGCGCAGAGCAGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: GLGSRVQFVFLP*AQLGDSAEQVI Trigger: TATGACCTGCTCTGCGCTGTCTCCAAGCTGGGCCCAGGGGAGAAATACGAACTGCACGCGGGAACCGAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS CCA 72 bp | TTTCGCTCTCACAGACGTGCACCACCACACTGGGGGTaGACTCGGTTCCCGCGTGCAGTTCGTATTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FRSHRRAPPHWG*TRFPRAVRISP Trigger: GGGAGAAATACGAACTGCACGCGGGAACCGAGTCCACCCCCAGTGTGGTGGTGCACGTCTGTGAGAGCGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030606.14 |
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| CDS CAA 72 bp | TGGAGCTCTATCCGCGCTCTTGCCGCAGCCTCGGGCTaGCTGAAGTTGATCCTCACTCTGCGAAAGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: WSSIRALAAASG*LKLILTLRKLL Trigger: CAAGAGCTTTCGCAGAGTGAGGATCAACTTCAGCAAGCCCGAGGCTGCGGCAAGAGCGCGGATAGAGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 ENSMUST00000156635.2 |
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| CDS CAA 90 bp | TCACTCTCGTGGAGCTCTATCCGCGCTCTTGCCGCAGCCTCGGGCTaGCTGAAGTTGATCCTCACTCTGCGAAAGCTCTTGAACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLSWSSIRALAAASG*LKLILTLRKLLNNW Trigger: CCAGTTGTTCAAGAGCTTTCGCAGAGTGAGGATCAACTTCAGCAAGCCCGAGGCTGCGGCAAGAGCGCGGATAGAGCTCCACGAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 ENSMUST00000156635.2 |
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| CDS CAA 72 bp | ATCCGCGCTCTTGCCGCAGCCTCGGGCTTGCTGAAGTaGATCCTCACTCTGCGAAAGCTCTTGAACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: IRALAAASGLLK*ILTLRKLLNNW Trigger: CCAGTTGTTCAAGAGCTTTCGCAGAGTGAGGATCAACTTCAGCAAGCCCGAGGCTGCGGCAAGAGCGCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 ENSMUST00000156635.2 |
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| CDS CAA 90 bp | TGGAGCTCTATCCGCGCTCTTGCCGCAGCCTCGGGCTTGCTGAAGTaGATCCTCACTCTGCGAAAGCTCTTGAACAACTGGAATGTGACC | + |
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Preference number: 6 (lower is better) Translates to: WSSIRALAAASGLLK*ILTLRKLLNNWNVT Trigger: GGTCACATTCCAGTTGTTCAAGAGCTTTCGCAGAGTGAGGATCAACTTCAGCAAGCCCGAGGCTGCGGCAAGAGCGCGGATAGAGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 ENSMUST00000156635.2 |
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| CDS CCA 72 bp | ACACTGCTTCATGGACACTGCAAGCAAAGAGTGAGGTaGGCAGGTCACTTAGGTCCATCATCTCTTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: TLLHGHCKQRVR*AGHLGPSSLPV Trigger: GACTGGAAGAGATGATGGACCTAAGTGACCTGCCCACCTCACTCTTTGCTTGCAGTGTCCATGAAGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000156635.2 |
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| CDS CCA 72 bp | CTCTCCTTTTGCTCTTGGACCTCAAACACTGCTTCATaGACACTGCAAGCAAAGAGTGAGGTGGGCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSFCSWTSNTAS*TLQAKSEVGRS Trigger: TGACCTGCCCACCTCACTCTTTGCTTGCAGTGTCCATGAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030606.14 ENSMUST00000156635.2 |
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| CDS CAA 72 bp | ATCGTAGAGGGTGAACAGGGCCTCAAACCTCTCCTTTaGCTCTTGGACCTCAAACACTGCTTCATGGACACT | + |
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Preference number: 6 (lower is better) Translates to: IVEGEQGLKPLL*LLDLKHCFMDT Trigger: AGTGTCCATGAAGCAGTGTTTGAGGTCCAAGAGCAAAAGGAGAGGTTTGAGGCCCTGTTCACCCTCTACGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030606.14 ENSMUST00000132654.8 ENSMUST00000156635.2 |
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