Pregenerated sensors for RCAN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039601Ensembl transcript IDs: ENSMUST00000044792.6, ENSMUST00000044895.13, ENSMUST00000177857.9, ENSMUST00000228972.2, ENSMUST00000229240.2, ENSMUST00000229744.2, ENSMUST00000229939.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTaGGACCAGATAGGGGGATCTCATGCAGTCAAAGCCAAGTTTACT | + |
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Preference number: 1 (lower is better) Translates to: GDRACPGNVGMQRTG*DQIGGSHAVKAKFT Trigger: AGTAAACTTGGCTTTGACTGCATGAGATCCCCCTATCTGGTCTCACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR GCA 90 bp | TGTCGGGATGCAGAGGACTGGGTGAGACCAGATAGGGGGATCTCATaGAGTCAAAGCCAAGTTTACTTATGGTCCTATATAAGTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: CRDAEDWVRPDRGIS*SQSQVYLWSYISGQ Trigger: CTGGCCACTTATATAGGACCATAAGTAAACTTGGCTTTGACTGCATGAGATCCCCCTATCTGGTCTCACCCAGTCCTCTGCATCCCGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR TCA 90 bp | GGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGTTATCTATTGGCATaGGACATTGCTGTTCCCTTTTACAACTTAGCACGAACCGCAATA | + |
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Preference number: 1 (lower is better) Translates to: GGLDSKGWLVSYLLA*DIAVPFYNLARTAI Trigger: TATTGCGGTTCGTGCTAAGTTGTAAAAGGGAACAGCAATGTCTCATGCCAATAGATAACTGACTAGCCAACCTTTGCTGTCCAAACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR GCA 90 bp | GCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTaGTCTGAAATGCTCAGCTGTATACATTTCTTGGATTTAGCGTCA | + |
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Preference number: 1 (lower is better) Translates to: ALDEWEGHPFTHHPL*SEMLSCIHFLDLAS Trigger: TGACGCTAAATCCAAGAAATGTATACAGCTGAGCATTTCAGAGCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR GCA 90 bp | ATTCACCAGATATATTTGAACTCTAAGCTCTTTGAGCTGTACACGTaGACAAATGATTCAGTTGGTGGAAACCTTCCCCTTCCCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: IHQIYLNSKLFELYT*TNDSVGGNLPLPLH Trigger: ATGGAGGGGAAGGGGAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAGAGTTCAAATATATCTGGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR CCA 90 bp | CATTTCTTGGATTTAGCGTCACCCAAGTTGCTTATAACTGATACTTaGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: HFLDLASPKLLITDT*IFVWKQVVWTAKVG Trigger: GCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAGTATCAGTTATAAGCAACTTGGGTGACGCTAAATCCAAGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR TCA 90 bp | CTGTATACATTTCTTGGATTTAGCGTCACCCAAGTTGCTTATAACTaGTACTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: LYTFLGFSVTQVAYN*YLDLCLETGGLDSK Trigger: TTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAGTATCAGTTATAAGCAACTTGGGTGACGCTAAATCCAAGAAATGTATACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR TCA 90 bp | AACATAAAGGCTCTTCATTACCGATGTCTCTGGCTTGGATCAACATaGAAGAACAGAGATATGGGCTGTACTGATTATTTAATAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: NIKALHYRCLWLGST*KNRDMGCTDYLIRK Trigger: TTTTCTTATTAAATAATCAGTACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAATGAAGAGCCTTTATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR GCA 90 bp | GCAATAGCATGTAATAGTATCAGGTTATCTACATTAGAATCAGAATaGATTCAGAAGCAACACAGGTATGATGTCATTAAGCAGCTAATG | + |
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Preference number: 1 (lower is better) Translates to: AIACNSIRLSTLESE*IQKQHRYDVIKQLM Trigger: CATTAGCTGCTTAATGACATCATACCTGTGTTGCTTCTGAATGCATTCTGATTCTAATGTAGATAACCTGATACTATTACATGCTATTGC 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCCCAGACTTATTGAGCTaGATGGTGCTGCGGATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LSSLSCTRAQMIQLVETFPDLLS*MVLRMP Trigger: GGGCATCCGCAGCACCATTCAGCTCAATAAGTCTGG...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR-3UTR CCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTAGCCAAGTTTACTTATaGTCCTATATAAGTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGSQVYL*SYISGQ Trigger: CTGGCCACTTATATAGGACCATAAGTAAACTTGGCT...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACATCTTTGGGGCCATaGTCAATTTTACCTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: NKELLSAWALDEWEGHPFTSLGP*SILPPG Trigger: TCCTGGAGGTAAAATTGAGCATGGCCCCAAAGATGT...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCAGCCAAGTTTACTTATaGTCCTATATAAGTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: AWALDEWEGHPFTHHPLCSQVYL*SYISGQ Trigger: CTGGCCACTTATATAGGACCATAAGTAAACTTGGCT...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTTGGGATACCACAAGTTaGGGCATACCCTCAAAATCA | + |
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Preference number: 2 (lower is better) Translates to: NKELLSAWALDEWEGHPFWDTTS*GIPSKS Trigger: TGATTTTGAGGGTATGCCCCAACTTGTGGTATCCCA...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR CAA 90 bp | TGGGTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTaGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAA | + |
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Preference number: 2 (lower is better) Translates to: WVGVDWETYHLCLAL*SERLNYKEGFANNQ Trigger: TTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTCATGATAAGAGGAGATaGATGTTATCATGGACGTGC | + |
|
Preference number: 2 (lower is better) Translates to: NKELLSAWALDEWEGHPFHDKRR*MLSWTC Trigger: GCACGTCCATGATAACATGCATCTCCTCTTATCATG...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCGAGACATATCACCTTTaGCTAGCCCTTTTGTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LSSLSCTRAQMIQLVETFETYHL*LALLSE Trigger: CTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTC...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR-3UTR CCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGTGGGTAGGAGTTGATTaGGAGACATATCACCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: LGSLFGNRWFGQQRLASQWVGVD*ETYHLC Trigger: GCAAAGGTGATATGTCTCCCAATCAACTCCTACCCA...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGCCGATGTCTCTGGCTTaGATCAACATGAAAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LGSLFGNRWFGQQRLASQPMSLA*INMKEQ Trigger: CTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGG...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTTTGTTTGGAAACAGGTaGTTTGGACAGCAAAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: NKELLSAWALDEWEGHPFLFGNR*FGQQRL Trigger: CAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAA...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR CAA 90 bp | AAAGTCACACATAACAAAAACAAGGAACTTTTGAGCGCATGGGCATaGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: KVTHNKNKELLSAWA*DEWEGHPFTHHPLC Trigger: GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTTTTTGTTATGTGTGACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCGGAATAGATGAGGCTTaGCACATGGAGCAGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LSSLSCTRAQMIQLVETFGIDEA*HMEQKV Trigger: TACTTTCTGCTCCATGTGTCAAGCCTCATCTATTCC...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGCATGATAAGAGGAGATaGATGTTATCATGGACGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSERLNYKEGFANNQTPRHDKRR*MLSWTC Trigger: GCACGTCCATGATAACATGCATCTCCTCTTATCATG...CCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTAGCCAAGTTTACTTATaGTCCTATATAAGTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: NKELLSAWALDEWEGHPFSQVYL*SYISGQ Trigger: CTGGCCACTTATATAGGACCATAAGTAAACTTGGCT...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGACACACACACAGGACTaGACTGGAGCAGCTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQTHTQD*TGAAHK Trigger: TTTGTGAGCTGCTCCAGTTCAGTCCTGTGTGTGTGT...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGATAAATAGGTTTGTCTaGAATCGGTCTCTGTCACTT | + |
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Preference number: 2 (lower is better) Translates to: LGSLFGNRWFGQQRLASQINRFV*NRSLSL Trigger: AAGTGACAGAGACCGATTTCAGACAAACCTATTTAT...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR GCA 90 bp | ATTACCGATGTCTCTGGCTTGGATCAACATGAAAGAACAGAGATATGGGCTGTACATGATAAGAGGAGATaGATGTTATCATGGACGTGC | + |
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Preference number: 2 (lower is better) Translates to: ITDVSGLDQHERTEIWAVHDKRR*MLSWTC Trigger: GCACGTCCATGATAACATGCATCTCCTCTTATCATG...TACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGACATTAGAATCAGAATaGATTCAGAAGCAACACAGG | + |
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Preference number: 2 (lower is better) Translates to: LGSLFGNRWFGQQRLASQTLESE*IQKQHR Trigger: CCTGTGTTGCTTCTGAATGCATTCTGATTCTAATGT...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCACTTGGATCTTTGTTTaGAAACAGGTGGTTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: LSSLSCTRAQMIQLVETFTWIFV*KQVVWT Trigger: TGTCCAAACCACCTGTTTCCAAACAAAGATCCAAGT...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGTGGGCATTGGATGAATaGGAAGGGCATCCGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQWALDE*EGHPFT Trigger: GGTAAACGGATGCCCTTCCCATTCATCCAATGCCCA...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR CAA 90 bp | TGCTATCATTGTTTGGAAGCGCAAATTATTTCCCAGACTTTCATTTaGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: CYHCLEAQIISQTFI*FLSLSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAAAATGAAAGTCTGGGAAATAATTTGCGCTTCCAAACAATGATAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR-3UTR GCA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGCATGATAAGAGGAGATaGATGTTATCATGGACGTGC | + |
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Preference number: 2 (lower is better) Translates to: EGFANNQTPRDLKAINCLHDKRR*MLSWTC Trigger: GCACGTCCATGATAACATGCATCTCCTCTTATCATG...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGGAGACATATCACCTTTaGCTAGCCCTTTTGTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQETYHL*LALLSE Trigger: CTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTC...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGTCATCCTTTGTGCTCTaGAATGCTCAGCTGTATACA | + |
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Preference number: 2 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQSSFVL*NAQLYT Trigger: TGTATACAGCTGAGCATTTCAGAGCACAAAGGATGA...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR GCA 90 bp | AACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACAACAACATGATAAGAGGAGATaGATGTTATCATGGACGTGC | + |
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Preference number: 2 (lower is better) Translates to: NNQTPRDLKAINCLDKQQHDKRR*MLSWTC Trigger: GCACGTCCATGATAACATGCATCTCCTCTTATCATG...TTGTTGTTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGTTACCTCCAGGAATTTaGCCAGAGTTATATGATGTA | + |
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Preference number: 2 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQLPPGI*PELYDV Trigger: TACATCATATAACTCTGGCCAAATTCCTGGAGGTAA...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR CCA 72 bp | TCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTaGGTGAGACCAGATAGGGGGATCTCATGCAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: SCMSWECRDAED*VRPDRGISCSQ Trigger: TTGACTGCATGAGATCCCCCTATCTGGTCTCACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR TCA 72 bp | GAGGTTTGCATAATGAGCATCATGGAAGTGTCCAGGTaGCTTTCTCGATGCTGGGAGGTCCCGTGGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: EVCIMSIMEVSR*LSRCWEVPWLP Trigger: GGGAAGCCACGGGACCTCCCAGCATCGAGAAAGTCACCTGGACACTTCCATGATGCTCATTATGCAAACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| 3UTR-3UTR CAA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCGGAGACATATCACCTTaGCCTAGCCCTTTTGTCCGA | + |
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Preference number: 3 (lower is better) Translates to: AWALDEWEGHPFTHHPLCGDISP*PSPFVR Trigger: TCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCC...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR CCA 72 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATaGGAAGGGCATCCGTTTACCCATCATCCTTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: NKELLSAWALDE*EGHPFTHHPLC Trigger: GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR-3UTR CAA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCCTGATACTTGGATCTTaGTTTGGAAACAGGTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: AWALDEWEGHPFTHHPLCLILGS*FGNRWF Trigger: AAACCACCTGTTTCCAAACAAAGATCCAAGTATCAG...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR TCA 72 bp | CAAAAACAAGGAACTTTTGAGCGCATGGGCATTGGATaGATGGGAAGGGCATCCGTTTACCCATCATCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QKQGTFERMGIG*MGRASVYPSSF Trigger: AAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CCA 72 bp | CTTGTCTATACAGGACAGGGCTGGGATACCACAAGTTaGGGCATACCCTCAAAATCATCAAAATCAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVYTGQGWDTTS*GIPSKSSKSML Trigger: CAGCATTGATTTTGATGATTTTGAGGGTATGCCCCAACTTGTGGTATCCCAGCCCTGTCCTGTATAGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CCA 72 bp | GTCACACATAACAAAAACAAGGAACTTTTGAGCGCATaGGCATTGGATGAATGGGAAGGGCATCCGTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: VTHNKNKELLSA*ALDEWEGHPFT Trigger: GGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTTTTTGTTATGTGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCGGAAAGTCAAAGCCTTaGCTTACTGTGTACACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSLSCTRAQMIQLVETFGKSKP*LTVYTP Trigger: AGGAGTGTACACAGTAAGCAAAGGCTTTGACTTTCC...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
||
| 3UTR TCA 72 bp | GGAAGGGCATCCGTTTACCCATCATCCTTTGTGCTCTaGAATGCTCAGCTGTATACATTTCTTGGATTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRASVYPSSFVL*NAQLYTFLGFS Trigger: GCTAAATCCAAGAAATGTATACAGCTGAGCATTTCAGAGCACAAAGGATGATGGGTAAACGGATGCCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR GCA 72 bp | GAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTaGTCTGAAATGCTCAGCTGTATACATTTCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EWEGHPFTHHPL*SEMLSCIHFLD Trigger: ATCCAAGAAATGTATACAGCTGAGCATTTCAGAGCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR TCA 72 bp | GACAGCAAAGGTTGGCTAGTCAGTTATCTATTGGCATaGGACATTGCTGTTCCCTTTTACAACTTAGCACGA | + |
|
Preference number: 3 (lower is better) Translates to: DSKGWLVSYLLA*DIAVPFYNLAR Trigger: TCGTGCTAAGTTGTAAAAGGGAACAGCAATGTCTCATGCCAATAGATAACTGACTAGCCAACCTTTGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR GCA 72 bp | AGGTTGGCTAGTCAGTTATCTATTGGCATGAGACATTaGTGTTCCCTTTTACAACTTAGCACGAACCGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RLASQLSIGMRH*CSLLQLSTNRN Trigger: ATTGCGGTTCGTGCTAAGTTGTAAAAGGGAACAGCAATGTCTCATGCCAATAGATAACTGACTAGCCAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CCA 72 bp | CAACATAAAGGCTCTTCATTACCGATGTCTCTGGCTTaGATCAACATGAAAGAACAGAGATATGGGCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QHKGSSLPMSLA*INMKEQRYGLY Trigger: GTACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAATGAAGAGCCTTTATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGGGAGACATATCACCTTaGCCTAGCCCTTTTGTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQGDISP*PSPFVR Trigger: TCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCC...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CCA 72 bp | GATTTAGCGTCACCCAAGTTGCTTATAACTGATACTTaGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DLASPKLLITDT*IFVWKQVVWTA Trigger: TGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAGTATCAGTTATAAGCAACTTGGGTGACGCTAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGCTTTGCCTAGCCCTTTaGTCCGAGAGGCTTAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQLCLAL*SERLNY Trigger: GTAATTAAGCCTCTCGGACAAAAGGGCTAGGCAAAG...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR GCA 72 bp | ATATATTTGAACTCTAAGCTCTTTGAGCTGTACACGTaGACAAATGATTCAGTTGGTGGAAACCTTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IYLNSKLFELYT*TNDSVGGNLPL Trigger: AAGGGGAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAGAGTTCAAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
||
| 3UTR CCA 72 bp | TTAGGCCATGAAAGTCCTTGCCTGTTGTGTGGTAAATaGTATTTGCATCCAAAGTTACTAGTTAATGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LGHESPCLLCGK*YLHPKLLVNEQ Trigger: CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCAAGGACTTTCATGGCCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CCA 72 bp | GTATGGTTCTGCAGGTGTATCTTCTGTAATGCACTTTaGGCTAGAGATATACAAAAGTCACACATAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VWFCRCIFCNAL*ARDIQKSHITK Trigger: TTTTGTTATGTGTGACTTTTGTATATCTCTAGCCCAAAGTGCATTACAGAAGATACACCTGCAGAACCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTGTTGGACACGGAGGGTaGCAGGCCGGGACGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGVGHGG*QAGTPG Trigger: ACCCGGCGTCCCGGCCTGCCACCCTCCGTGTCCAAC...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTGTTGGACACGGAGGGTaGCAGGCCGGGACGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKELLSAWALDEWEGHPFVGHGG*QAGTPG Trigger: ACCCGGCGTCCCGGCCTGCCACCCTCCGTGTCCAAC...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGGTTGGACACGGAGGGTaGCAGGCCGGGACGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGVGHGG*QAGTPG Trigger: ACCCGGCGTCCCGGCCTGCCACCCTCCGTGTCCAAC...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR GCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTTCGCTGTCACACACATaGACCACGACGCTCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGSLSHT*TTTLGV Trigger: TACACCGAGCGTCGTGGTGCATGTGTGTGACAGCGA...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTAAAGAAGGTCATAGTTaGGGACTGGTGTGGCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGKEGHS*GLVWHR Trigger: GCGATGCCACACCAGTCCTCAACTATGACCTTCTTT...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTCTGTTTGGCAGGCTGTaGAGGTGCCAAATGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGLFGRL*RCQMQF Trigger: AAACTGCATTTGGCACCTCCACAGCCTGCCAAACAG...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTGTCATAGTTGAGGACTaGTGTGGCATCGCTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGVIVED*CGIADR Trigger: CCTATCAGCGATGCCACACCAGTCCTCAACTATGAC...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGTTGGACACGGAGGGTaGCAGGCCGGGACGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGFANNQTPRDLKAINCLVGHGG*QAGTPG Trigger: ACCCGGCGTCCCGGCCTGCCACCCTCCGTGTCCAAC...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGGGGATAGATGCCTGCTaGCCCAAGCTCCTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGVDWETYHLCLALLSERGIDAC*PKLLIP Trigger: TGGAATGAGGAGCTTGGGGCAGCAGGCATCTATCCC...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTCTCCTGGTCCTAGTTTaGCCACAGCATAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGLLVLV*PQHKEG Trigger: ACCTTCTTTATGCTGTGGCCAAACTAGGACCAGGAG...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTCCGGGACGCCGGGTCTaGATGATTTTTGGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKELLSAWALDEWEGHPFPGRRV*MIFGFG Trigger: CCCAAAGCCAAAAATCATCCAGACCCGGCGTCCCGG...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGCCGGGACGCCGGGTCTaGATGATTTTTGGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGPGRRV*MIFGFG Trigger: CCCAAAGCCAAAAATCATCCAGACCCGGCGTCCCGG...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCAAAGAAGGTCATAGTTaGGGACTGGTGTGGCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: AWALDEWEGHPFTHHPLCKEGHS*GLVWHR Trigger: GCGATGCCACACCAGTCCTCAACTATGACCTTCTTT...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCCAGCAAAACACTGAGTaGCAGCCCAGTCTCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AWALDEWEGHPFTHHPLCQQNTE*QPSLCL Trigger: TAGACAGAGACTGGGCTGTCACTCAGTGTTTTGCTG...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGGGCAGGCTGTGGAGGTaGCAAATGCAGTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGGRLWR*QMQFVS Trigger: GGAGACAAACTGCATTTGGCACCTCCACAGCCTGCC...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGTCAGGGATAGATGCCTaGTGCCCCAAGCTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VGVDWETYHLCLALLSERSGIDA*CPKLLI Trigger: AATGAGGAGCTTGGGGCAGCAGGCATCTATCCCTGA...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCCTGTTTGGCAGGCTGTaGAGGTGCCAAATGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWALDEWEGHPFTHHPLCLFGRL*RCQMQF Trigger: AAACTGCATTTGGCACCTCCACAGCCTGCCAAACAG...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGDDFWL*GSLWVL Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGTCTTCAGCAAAACACTaGGTGACAGCCCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGVDWETYHLCLALLSERSSAKH*VTAQSL Trigger: CAGAGACTGGGCTGTCACTCAGTGTTTTGCTGAAGA...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACGGCAGGCTGTGGAGGTaGCAAATGCAGTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNGRLWR*QMQFVS Trigger: GGAGACAAACTGCATTTGGCACCTCCACAGCCTGCC...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCCCCAGTCTCTGTCTATaGAGCAGAGGAAGAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWALDEWEGHPFTHHPLCPSLCL*SRGRKV Trigger: GACTTTTCTTCCTCTGCTGCATAGACAGAGACTGGG...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGCACAGGCGACCAGAGTaGAAACATCACAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGHRRPE*KHHSPC Trigger: GCATGGACTGTGATGTTTCCACTCTGGTCGCCTGTG...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000177857.9 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGGTCATAGTTGAGGACTaGTGTGGCATCGCTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVDWETYHLCLALLSERVIVED*CGIADR Trigger: CCTATCAGCGATGCCACACCAGTCCTCAACTATGAC...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCCTCCTGGTCCTAGTTTaGCCACAGCATAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWALDEWEGHPFTHHPLCLLVLV*PQHKEG Trigger: ACCTTCTTTATGCTGTGGCCAAACTAGGACCAGGAG...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGCTTTGGGGAAGTCTTTaGGTCCTCCTCCTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGLWGSL*VLLLLH Trigger: ATGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAG...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCTTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWALDEWEGHPFTHHPLCLASSL*TESHEA Trigger: AGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAA...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGAAAGAAGGTCATAGTTaGGGACTGGTGTGGCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGKEGHS*GLVWHR Trigger: GCGATGCCACACCAGTCCTCAACTATGACCTTCTTT...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGAGCTCCTCATTCCAATaGAGTAGGCGTCTCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSLFGNRWFGQQRLASQSSSFQ*SRRLPS Trigger: TGAGGGGAGACGCCTACTTCATTGGAATGAGGAGCT...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGAGCTCCTCATTCCAATaGAGTAGGCGTCTCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSERLNYKEGFANNQTPRSSSFQ*SRRLPS Trigger: TGAGGGGAGACGCCTACTTCATTGGAATGAGGAGCT...CCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCGGCAGGCTGTGGAGGTaGCAAATGCAGTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSERLNYKEGFANNQTPGRLWR*QMQFVS Trigger: GGAGACAAACTGCATTTGGCACCTCCACAGCCTGCC...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCGGGATAGATGCCTGCTaGCCCAAGCTCCTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSERLNYKEGFANNQTPGIDAC*PKLLIP Trigger: TGGAATGAGGAGCTTGGGGCAGCAGGCATCTATCCC...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGATCTTCAGGGATAGATaGCTGCTGCCCCAAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSLFGNRWFGQQRLASQIFRDR*LLPQAP Trigger: AGGAGCTTGGGGCAGCAGGCATCTATCCCTGAAGAT...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGACTGAAGTCAGTGAGTaGTTGGAAGGCCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGTEVSE*LEGLFS Trigger: GCTGAAGAGGCCTTCCAAGCACTCACTGACTTCAGT...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCACAGGCGACCAGAGTaGAAACATCACAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNHRRPE*KHHSPC Trigger: GCATGGACTGTGATGTTTCCACTCTGGTCGCCTGTG...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000177857.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCTTTGGGGAAGTCTTTaGGTCCTCCTCCTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNLWGSL*VLLLLH Trigger: ATGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAG...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR GCA 90 bp | ATTACCGATGTCTCTGGCTTGGATCAACATGAAAGAACAGAGATATGGGCTGTAGGCAGGCTGTGGAGGTaGCAAATGCAGTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITDVSGLDQHERTEIWAVGRLWR*QMQFVS Trigger: GGAGACAAACTGCATTTGGCACCTCCACAGCCTGCC...TACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTCCCAGTCTCTGTCTATaGAGCAGAGGAAGAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKELLSAWALDEWEGHPFPSLCL*SRGRKV Trigger: GACTTTTCTTCCTCTGCTGCATAGACAGAGACTGGG...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCTGTTTGGCAGGCTGTaGAGGTGCCAAATGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNLFGRL*RCQMQF Trigger: AAACTGCATTTGGCACCTCCACAGCCTGCCAAACAG...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACGTCATAGTTGAGGACTaGTGTGGCATCGCTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNVIVED*CGIADR Trigger: CCTATCAGCGATGCCACACCAGTCCTCAACTATGAC...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTCTCCTGGTCCTAGTTTaGCCACAGCATAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKELLSAWALDEWEGHPFLLVLV*PQHKEG Trigger: ACCTTCTTTATGCTGTGGCCAAACTAGGACCAGGAG...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCCTTTGGGGAAGTCTTTaGGTCCTCCTCCTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSERLNYKEGFANNQTPLWGSL*VLLLLH Trigger: ATGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAG...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGVDWETYHLCLALLSERDDFWL*GSLWVL Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGGGTCTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVDWETYHLCLALLSERGLDDF*LWGSLW Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAGACC...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGCCGGGACGCCGGGTCTaGATGATTTTTGGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGFANNQTPRDLKAINCLPGRRV*MIFGFG Trigger: CCCAAAGCCAAAAATCATCCAGACCCGGCGTCCCGG...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCAAAGAAGGTCATAGTTaGGGACTGGTGTGGCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLSCTRAQMIQLVETFKEGHS*GLVWHR Trigger: GCGATGCCACACCAGTCCTCAACTATGACCTTCTTT...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
||
| CDS-3UTR CCA 90 bp | GGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACCTTTGGGGAAGTCTTTaGGTCCTCCTCCTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFANNQTPRDLKAINCLDLWGSL*VLLLLH Trigger: ATGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAG...GTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGTTTTCCTTAACCTCCTaGTTGGTAAAGACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGFSLTS*LVKTST Trigger: TGTGGAGGTCTTTACCAATCAGGAGGTTAAGGAAAA...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000177857.9 |
||
| CDS-3UTR TCA 90 bp | ATTACCGATGTCTCTGGCTTGGATCAACATGAAAGAACAGAGATATGGGCTGTACAGCAAAACACTGAGTaGCAGCCCAGTCTCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ITDVSGLDQHERTEIWAVQQNTE*QPSLCL Trigger: TAGACAGAGACTGGGCTGTCACTCAGTGTTTTGCTG...TACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGGCTGCAGATTTGGGATaGCTGAAATTTATTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLITRKDSQTTKHPGAADLG*LKFIRT Trigger: GGTTCGAATAAATTTCAGCCATCCCAAATCTGCAGC...CCCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSERLNYKEGFANNQTPRDDFWL*GSLWVL Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...CCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGGGTCTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLFGNRWFGQQRLASQGLDDF*LWGSLW Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAGACC...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGGTCTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSERLNYKEGFANNQTPRGLDDF*LWGSLW Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAGACC...CCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACGGTCTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNGLDDF*LWGSLW Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAGACC...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGCCGGGACGCCGGGTCTaGATGATTTTTGGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQPGRRV*MIFGFG Trigger: CCCAAAGCCAAAAATCATCCAGACCCGGCGTCCCGG...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGATCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTTGGCTAGTCAGAAGTCAGTGAGTGCTTaGAAGGCCTCTTCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSLFGNRWFGQQRLASQKSVSA*KASSAK Trigger: TTTTGCTGAAGAGGCCTTCCAAGCACTCACTGACTT...CTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGATCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CAA 72 bp | GTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTaGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDWETYHLCLAL*SERLNYKEGFA Trigger: TGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGTTTTCCTTAACCTCCTaGTTGGTAAAGACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSERLNYKEGFANNQTPRFSLTS*LVKTST Trigger: TGTGGAGGTCTTTACCAATCAGGAGGTTAAGGAAAA...CCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000177857.9 |
||
| CDS-3UTR TCA 90 bp | CTAAGCTCTTTGAGCTGTACACGTGCACAAATGATTCAGTTGGTGGAAACCTTCTTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSLSCTRAQMIQLVETFLASSL*TESHEA Trigger: AGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAA...GAAGGTTTCCACCAACTGAATCATTTGTGCACGTGTACAGCTCAAAGAGCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
||
| CDS-3UTR TCA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGTCTTCAGCAAAACACTaGGTGACAGCCCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGFANNQTPRDLKAINCLSSAKH*VTAQSL Trigger: CAGAGACTGGGCTGTCACTCAGTGTTTTGCTGAAGA...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACTCAAACACAGACTGGTaGACATTGCAGGCAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLALLSERLNYKEGFANNSNTDW*TLQANN Trigger: ATTGTTTGCCTGCAATGTTCACCAGTCTGTGTTTGA...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGACTGAAGTCAGTGAGTaGTTGGAAGGCCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGFANNQTPRDLKAINCLTEVSE*LEGLFS Trigger: GCTGAAGAGGCCTTCCAAGCACTCACTGACTTCAGT...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACTTTGGGGAAGTCTTTaGGTCCTCCTCCTCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FANNQTPRDLKAINCLDKLWGSL*VLLLLH Trigger: ATGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAG...TTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAAGTCAGTGAGTGCTTaGAAGGCCTCTTCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSERLNYKEGFANNQTPKSVSA*KASSAK Trigger: TTTTGCTGAAGAGGCCTTCCAAGCACTCACTGACTT...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| 3UTR CAA 72 bp | GATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTaGTGCTCTGAAATGCTCAGCTGTATACATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DEWEGHPFTHHP*CSEMLSCIHFL Trigger: CAAGAAATGTATACAGCTGAGCATTTCAGAGCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | AACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACAACAATCAGGGATAGATGCCTaGTGCCCCAAGCTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NNQTPRDLKAINCLDKQQSGIDA*CPKLLI Trigger: AATGAGGAGCTTGGGGCAGCAGGCATCTATCCCTGA...TTGTTGTTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR GCA 90 bp | AACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACAACAAATCTTCAGGGATAGATaGCTGCTGCCCCAAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNQTPRDLKAINCLDKQQIFRDR*LLPQAP Trigger: AGGAGCTTGGGGCAGCAGGCATCTATCCCTGAAGAT...TTGTTGTTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAACTTTTGAGCGCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTAAACTCTTAAACAGCTaGAACGTCACACATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NKELLSAWALDEWEGHPFKLLNS*NVTHSS Trigger: TGATGAATGTGTGACGTTCCAGCTGTTTAAGAGTTT...AAACGGATGCCCTTCCCATTCATCCAATGCCCATGCGCTCAAAAGTTCCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCGCTGCAGATTTGGGATaGCTGAAATTTATTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLSERLNYKEGFANNQTPAADLG*LKFIRT Trigger: GGTTCGAATAAATTTCAGCCATCCCAAATCTGCAGC...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
||
| CDS-3UTR CCA 90 bp | TTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAAGTCATAGTTGAGGACTaGTGTGGCATCGCTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FANNQTPRDLKAINCLDKVIVED*CGIADR Trigger: CCTATCAGCGATGCCACACCAGTCCTCAACTATGAC...TTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| 3UTR CAA 72 bp | TCTTTGTTTGGAAACAGGTGGTTTGGACAGCAAAGGTaGGCTAGTCAGTTATCTATTGGCATGAGACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFGNRWFGQQR*ASQLSIGMRHC Trigger: GCAATGTCTCATGCCAATAGATAACTGACTAGCCAACCTTTGCTGTCCAAACCACCTGTTTCCAAACAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGCTGTTTGGCAGGCTGTaGAGGTGCCAAATGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQLFGRL*RCQMQF Trigger: AAACTGCATTTGGCACCTCCACAGCCTGCCAAACAG...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | TTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACTCCTGGTCCTAGTTTaGCCACAGCATAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FANNQTPRDLKAINCLDKLLVLV*PQHKEG Trigger: ACCTTCTTTATGCTGTGGCCAAACTAGGACCAGGAG...TTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR TCA 90 bp | TTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAATTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FANNQTPRDLKAINCLDKLASSL*TESHEA Trigger: AGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAA...TTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAAACTCTTAAACAGCTaGAACGTCACACATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSERLNYKEGFANNQTPKLLNS*NVTHSS Trigger: TGATGAATGTGTGACGTTCCAGCTGTTTAAGAGTTT...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | TTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAAGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FANNQTPRDLKAINCLDKDDFWL*GSLWVL Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...TTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| 3UTR CAA 72 bp | CGGTCTCAATCGTACTGTACCGTGTCCGGCACTATATaGCTATATTTCACAGTAGAACGGACTTTTAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSQSYCTVSGTI*LYFTVERTFNF Trigger: AAAATTAAAAGTCCGTTCTACTGTGAAATATAGCAATATAGTGCCGGACACGGTACAGTACGATTGAGACCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| 3UTR CAA 72 bp | TGTTTGGAAGCGCAAATTATTTCCCAGACTTTCATTTaGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLEAQIISQTFI*FLSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAAAATGAAAGTCTGGGAAATAATTTGCGCTTCCAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 |
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| CDS-3UTR TCA 90 bp | AACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACAACAATCAAACACAGACTGGTaGACATTGCAGGCAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: NNQTPRDLKAINCLDKQQSNTDW*TLQANN Trigger: ATTGTTTGCCTGCAATGTTCACCAGTCTGTGTTTGA...TTGTTGTTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGAAACTCTTAAACAGCTaGAACGTCACACATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: EGFANNQTPRDLKAINCLKLLNS*NVTHSS Trigger: TGATGAATGTGTGACGTTCCAGCTGTTTAAGAGTTT...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGGCTGCAGATTTGGGATaGCTGAAATTTATTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQAADLG*LKFIRT Trigger: GGTTCGAATAAATTTCAGCCATCCCAAATCTGCAGC...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CCA 90 bp | AACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAACAACAAGCTGCAGATTTGGGATaGCTGAAATTTATTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NNQTPRDLKAINCLDKQQAADLG*LKFIRT Trigger: GGTTCGAATAAATTTCAGCCATCCCAAATCTGCAGC...TTGTTGTTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| 3UTR CAA 72 bp | AGCTGTATACATTTCTTGGATTTAGCGTCACCCAAGTaGCTTATAACTGATACTTGGATCTTTGTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCIHFLDLASPK*LITDTWIFVWK Trigger: TTTCCAAACAAAGATCCAAGTATCAGTTATAAGCAACTTGGGTGACGCTAAATCCAAGAAATGTATACAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS TCA 90 bp | CTGGGGTCTGGACCTGGGCGAAGTAGAGTTTTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCTCTATCCGGGCACGGGCTGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LGSGPGRSRVLASSL*TESHEALSGHGLQI Trigger: AATCTGCAGCCCGTGCCCGGATAGAGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAAAACTCTACTTCGCCCAGGTCCAGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000228972.2 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | TCAATGCTGGTGATCGTGCATGTCCTGGGAATGTCGGGATGCAGAGGACTGGGTGGTGCCAAATGCAGTTaGTCTCCATCTGTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SMLVIVHVLGMSGCRGLGGAKCS*SPSVSG Trigger: CCCAGAGACAGATGGAGACAAACTGCATTTGGCACC...ACCCAGTCCTCTGCATCCCGACATTCCCAGGACATGCACGATCACCAGCATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCGAGATGAGGAACTGTTaGGCAGGCTGTGGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWALDEWEGHPFTHHPLCEMRNC*AGCGGA Trigger: GGCACCTCCACAGCCTGCCAAACAGTTCCTCATCTC...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS TCA 90 bp | CTGTCTCTGGGGTCTGGGCGAAGTAGAGTTTTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCTCTATCCGGGCACGGGCTGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LSLGSGRSRVLASSL*TESHEALSGHGLQI Trigger: AATCTGCAGCCCGTGCCCGGATAGAGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAAAACTCTACTTCGCCCAGACCCCAGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229240.2 |
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| CDS-3UTR CAA 90 bp | GTAGGAGTTGATTGGGAGACATATCACCTTTGCCTAGCCCTTTTGTCCGAGAGGGAGATGAGGAACTGTTaGGCAGGCTGTGGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGVDWETYHLCLALLSEREMRNC*AGCGGA Trigger: GGCACCTCCACAGCCTGCCAAACAGTTCCTCATCTC...CCTCTCGGACAAAAGGGCTAGGCAAAGGTGATATGTCTCCCAATCAACTCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS GCA 90 bp | CTTCCCTCTGAACTGAGTCTCATGAAGCTCTATCCGGGCACGGGCTaGAGATTTGGGATGGCTGAAATTTATTCGAACCCGTCGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LPSELSLMKLYPGTG*RFGMAEIYSNPSET Trigger: AGTTTCCGACGGGTTCGAATAAATTTCAGCCATCCCAAATCTGCAGCCCGTGCCCGGATAGAGCTTCATGAGACTCAGTTCAGAGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000228972.2 ENSMUST00000229240.2 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | TGCCTAGCCCTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACGCTTTGGGGAAGTCTTaGGGTCCTCCTCCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLALLSERLNYKEGFANNALGKS*GPPPPP Trigger: TGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAGC...GTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAGGGCTAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| CDS-3UTR CAA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCGAGATGAGGAACTGTTaGGCAGGCTGTGGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSERLNYKEGFANNQTPEMRNC*AGCGGA Trigger: GGCACCTCCACAGCCTGCCAAACAGTTCCTCATCTC...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS TCA 90 bp | CTCCTCTTCTTCAAACACAGACTGGTGAACATTGCAGGCAAACAATaGGTTGGGGAGATCACTGAAGTCAGTGAGTGCTTGGAAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLFFKHRLVNIAGKQ*VGEITEVSECLEGL Trigger: GAGGCCTTCCAAGCACTCACTGACTTCAGTGATCTCCCCAACTCATTGTTTGCCTGCAATGTTCACCAGTCTGTGTTTGAAGAAGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044895.13 ENSMUST00000228972.2 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | GGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACGAGATGAGGAACTGTTaGGCAGGCTGTGGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GFANNQTPRDLKAINCLDEMRNC*AGCGGA Trigger: GGCACCTCCACAGCCTGCCAAACAGTTCCTCATCTC...GTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | GGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACGCTTTGGGGAAGTCTTaGGGTCCTCCTCCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFANNQTPRDLKAINCLDALGKS*GPPPPP Trigger: TGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAGC...GTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| CDS-3UTR CAA 90 bp | GCATGGGCATTGGATGAATGGGAAGGGCATCCGTTTACCCATCATCCTTTGTGCCCCTCGAATTTTTCCTaGCTCTCCTCTTCTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AWALDEWEGHPFTHHPLCPSNFS*LSSSSN Trigger: GTTTGAAGAAGAGGAGAGCAAGGAAAAATTCGAGGG...GCACAAAGGATGATGGGTAAACGGATGCCCTTCCCATTCATCCAATGCCCATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | TTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCAGGGCACGGGCTGCAGATTaGGGATGGCTGAAATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LSERLNYKEGFANNQTPRARAAD*GWLKFI Trigger: AATAAATTTCAGCCATCCCAAATCTGCAGCCCGTGC...CCTGGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | TTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGACAAAGCTTTGGGGAAGTCTTaGGGTCCTCCTCCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FANNQTPRDLKAINCLDKALGKS*GPPPPP Trigger: TGGAGGAGGAGGAGGACCCAAAGACTTCCCCAAAGC...TTTGTCCAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| CDS TCA 90 bp | CCCTCGAATTTTTCCTTGCTCTCCTCTTCTTCAAACACAGACTGGTaGACATTGCAGGCAAACAATGAGTTGGGGAGATCACTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSNFSLLSSSSNTDW*TLQANNELGRSLKS Trigger: TGACTTCAGTGATCTCCCCAACTCATTGTTTGCCTGCAATGTTCACCAGTCTGTGTTTGAAGAAGAGGAGAGCAAGGAAAAATTCGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044895.13 ENSMUST00000228972.2 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCGCACGGGCTGCAGATTaGGGATGGCTGAAATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LLSERLNYKEGFANNQTPARAAD*GWLKFI Trigger: AATAAATTTCAGCCATCCCAAATCTGCAGCCCGTGC...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | ATTACCGATGTCTCTGGCTTGGATCAACATGAAAGAACAGAGATATGGGCTGTAGCACGGGCTGCAGATTaGGGATGGCTGAAATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: ITDVSGLDQHERTEIWAVARAAD*GWLKFI Trigger: AATAAATTTCAGCCATCCCAAATCTGCAGCCCGTGC...TACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | ATTACCGATGTCTCTGGCTTGGATCAACATGAAAGAACAGAGATATGGGCTGTACAGGCAAACAATGAGTaGGGGAGATCACTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITDVSGLDQHERTEIWAVQANNE*GRSLKS Trigger: TGACTTCAGTGATCTCCCCAACTCATTGTTTGCCTG...TACAGCCCATATCTCTGTTCTTTCATGTTGATCCAAGCCAGAGACATCGGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | CTTTTGTCCGAGAGGCTTAATTACAAGGAAGGATTCGCAAACAACCAAACACCCCCCTCGAATTTTTCCTaGCTCTCCTCTTCTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSERLNYKEGFANNQTPPSNFS*LSSSSN Trigger: GTTTGAAGAAGAGGAGAGCAAGGAAAAATTCGAGGG...GGGTGTTTGGTTGTTTGCGAATCCTTCCTTGTAATTAAGCCTCTCGGACAAAAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | GAAGGATTCGCAAACAACCAAACACCCAGGGACTTAAAGGCAATTAATTGTTTGGCACGGGCTGCAGATTaGGGATGGCTGAAATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: EGFANNQTPRDLKAINCLARAAD*GWLKFI Trigger: AATAAATTTCAGCCATCCCAAATCTGCAGCCCGTGC...CAAACAATTAATTGCCTTTAAGTCCCTGGGTGTTTGGTTGTTTGCGAATCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 |
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| CDS-3UTR CAA 90 bp | TGCCTGTTGTGTGGTAAATGGTATTTGCATCCAAAGTTACTAGTTAATGAACAGCAGGCAAACAATGAGTaGGGGAGATCACTGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLLCGKWYLHPKLLVNEQQANNE*GRSLKS Trigger: TGACTTCAGTGATCTCCCCAACTCATTGTTTGCCTG...CTGTTCATTAACTAGTAACTTTGGATGCAAATACCATTTACCACACAACAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044895.13 ENSMUST00000229744.2 |
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| CDS CCA 72 bp | GGGTGGCAGGCCGGGACGCCGGGTCTGGATGATTTTTaGCTTTGGGGAAGTCTTTGGGTCCTCCTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GWQAGTPGLDDF*LWGSLWVLLLL Trigger: GAGGAGGAGGAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATCCAGACCCGGCGTCCCGGCCTGCCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000229744.2 ENSMUST00000229939.2 |
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| CDS GCA 72 bp | GGGTCCTCCTCCTCCTCCATGTCGCTGTCACACACATaGACCACGACGCTCGGTGTAGACTCAGTTCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSSSMSLSHT*TTTLGVDSVPA Trigger: CGCTGGAACTGAGTCTACACCGAGCGTCGTGGTGCATGTGTGTGACAGCGACATGGAGGAGGAGGAGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000228972.2 ENSMUST00000229744.2 |
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| CDS CAA 72 bp | AACTGTTTGGCAGGCTGTGGAGGTGCCAAATGCAGTTaGTCTCCATCTGTCTCTGGGGTCTGGACCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: NCLAGCGGAKCS*SPSVSGVWTWA Trigger: CGCCCAGGTCCAGACCCCAGAGACAGATGGAGACAAACTGCATTTGGCACCTCCACAGCCTGCCAAACAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000228972.2 ENSMUST00000229744.2 |
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| CDS TCA 72 bp | GGACCTGGGCGAAGTAGAGTTTTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCTCTATCCGGGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPGRSRVLASSL*TESHEALSGHG Trigger: CCCGTGCCCGGATAGAGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAAAACTCTACTTCGCCCAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000228972.2 ENSMUST00000229744.2 |
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| CDS TCA 72 bp | GGGTCTGGGCGAAGTAGAGTTTTAGCTTCTTCCCTCTaGACTGAGTCTCATGAAGCTCTATCCGGGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGRSRVLASSL*TESHEALSGHG Trigger: CCCGTGCCCGGATAGAGCTTCATGAGACTCAGTTCAGAGGGAAGAAGCTAAAACTCTACTTCGCCCAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229240.2 |
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| CDS GCA 72 bp | GAACTGAGTCTCATGAAGCTCTATCCGGGCACGGGCTaGAGATTTGGGATGGCTGAAATTTATTCGAACCCG | + |
|
Preference number: 6 (lower is better) Translates to: ELSLMKLYPGTG*RFGMAEIYSNP Trigger: CGGGTTCGAATAAATTTCAGCCATCCCAAATCTGCAGCCCGTGCCCGGATAGAGCTTCATGAGACTCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044792.6 ENSMUST00000044895.13 ENSMUST00000177857.9 ENSMUST00000228972.2 ENSMUST00000229240.2 ENSMUST00000229744.2 |
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