Pregenerated sensors for RCAN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022951

Ensembl transcript IDs: ENSMUST00000023672.10, ENSMUST00000060005.15, ENSMUST00000231410.2, ENSMUST00000231813.2, ENSMUST00000232197.2, ENSMUST00000232239.2

Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTTaGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACCTCCGG	+
Preference number: 1 (lower is better) Translates to: LPPVGSLPPSAGNRV*RTSTHLLPRGSHLR Trigger: CCGGAGGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 90 bp	GCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTaGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGG	+
Preference number: 1 (lower is better) Translates to: ATGWPPTCGLPPTER*KQGLENINPFAPQG Trigger: CCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR CCA 90 bp	GGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATaGCCTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTGGAAACAG	+
Preference number: 1 (lower is better) Translates to: GSKCRTRNTGPAATG*PPTCGLPPTERWKQ Trigger: CTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR CCA 90 bp	GGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACAGTaGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACA	+
Preference number: 1 (lower is better) Translates to: GLENINPFAPQGKPQ*SRPLPPKPRPATCT Trigger: TGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
3UTR GCA 90 bp	CCACAGTGGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTaGACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTG	+
Preference number: 1 (lower is better) Translates to: PQWSRPLPPKPRPAT*TVKDSFPHVGFRAL Trigger: CAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCACTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 90 bp	CTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTTaGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACAGTGGT	+
Preference number: 1 (lower is better) Translates to: LPPVGSLPPSAGNRV*RTSTHLLPRGSHSG Trigger: ACCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
3UTR TCA 90 bp	TTCAGTGAATGGCCCAAGACAGTCCCAGGTGCCGTGGACATGGACTaGGGGGCAGCATCAGAACAAGGGGAGGAGGCCTTGACTCTCTTC	+
Preference number: 1 (lower is better) Translates to: FSEWPKTVPGAVDMD*GAASEQGEEALTLF Trigger: GAAGAGAGTCAAGGCCTCCTCCCCTTGTTCTGATGCTGCCCCTCAGTCCATGTCCACGGCACCTGGGACTGTCTTGGGCCATTCACTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 90 bp	GGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACACAATaGACCAGGCAGGGTGACGTGTGGATGTCTCCAGCCTCGACCCCA	+
Preference number: 1 (lower is better) Translates to: GLKINFFCREAQVTQ*TRQGDVWMSPASTP Trigger: TGGGGTCGAGGCTGGAGACATCCACACGTCACCCTGCCTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR TCA 90 bp	CTACTTGGGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTaGCACAATGCACCAGGCAGGGTGACGTGTGGATGTCTCCAGCCT	+
Preference number: 1 (lower is better) Translates to: LLGDSRSTSFAGKHK*HNAPGRVTCGCLQP Trigger: AGGCTGGAGACATCCACACGTCACCCTGCCTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 90 bp	GGCAGCAACCCTGCTGCTCTCCCACAGGTTAGGCTAAGTTCTACTTaGGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACA	+
Preference number: 1 (lower is better) Translates to: GSNPAALPQVRLSST*GLKINFFCREAQVT Trigger: TGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGCCTAACCTGTGGGAGAGCAGCAGGGTTGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 90 bp	CATCTGGATGAAAGGGGAAAGGCACTGTGTCCCTCTAGGAACACATaGCTACGACGGACTCCACATGCTCTGATTCACCCCATTAAACAC	+
Preference number: 1 (lower is better) Translates to: HLDERGKALCPSRNT*LRRTPHALIHPIKH Trigger: GTGTTTAATGGGGTGAATCAGAGCATGTGGAGTCCGTCGTAGCCATGTGTTCCTAGAGGGACACAGTGCCTTTCCCCTTTCATCCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR GCA 90 bp	CAGGTTAGGCTAAGTTCTACTTGGGGACTCAAGATCAACTTCTTTTaGAGGGAAGCACAAGTGACACAATGCACCAGGCAGGGTGACGTG	+
Preference number: 1 (lower is better) Translates to: QVRLSSTWGLKINFF*REAQVTQCTRQGDV Trigger: CACGTCACCCTGCCTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGCCTAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 90 bp	GGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTaGATGAAAGGGGAAAGGCACTGTGTCCCTCTAGGAACACATGGC	+
Preference number: 1 (lower is better) Translates to: GKAEILKCSPSVVVI*MKGERHCVPLGTHG Trigger: GCCATGTGTTCCTAGAGGGACACAGTGCCTTTCCCCTTTCATCCAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 90 bp	CCAGGGGAAGCCACCTCCGGAGTCCCCAAAGCATGCACTGTTAACTaGCATCAGGTTATTCAGAGTGACAAACTTTGTAATGGCAATGGT	+
Preference number: 1 (lower is better) Translates to: PGEATSGVPKACTVN*HQVIQSDKLCNGNG Trigger: ACCATTGCCATTACAAAGTTTGTCACTCTGAATAACCTGATGCCAGTTAACAGTGCATGCTTTGGGGACTCCGGAGGTGGCTTCCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR TCA 90 bp	AAACACATGACAGTAACCTCTACCACACACAAGTCACAGGTAGCTTaGAACTCCCTCTGCCCTCTACTTCCACCCAGGTACAGACAGGTA	+
Preference number: 1 (lower is better) Translates to: KHMTVTSTTHKSQVA*NSLCPLLPPRYRQV Trigger: TACCTGTCTGTACCTGGGTGGAAGTAGAGGGCAGAGGGAGTTTCAAGCTACCTGTGACTTGTGTGTGGTAGAGGTTACTGTCATGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 90 bp	GCAGAGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTaGCTTCCCAAGATGGAAAACAGCGTAACTTCCTACGTGAACAAA	+
Preference number: 1 (lower is better) Translates to: AEKTRTRGKSVPELS*LPKMENSVTSYVNK Trigger: TTTGTTCACGTAGGAAGTTACGCTGTTTTCCATCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 90 bp	CCTCTGCCCTCTACTTCCACCCAGGTACAGACAGGTACTAAGATATaGTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGG	+
Preference number: 1 (lower is better) Translates to: PLPSTSTQVQTGTKI*SWLYLQVYLHVSMG Trigger: CCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCATATCTTAGTACCTGTCTGTACCTGGGTGGAAGTAGAGGGCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR TCA 90 bp	GGTGAAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATaGAATTCACACACAAACCACTACATGAAGGAAACAACGGAGACC	+
Preference number: 1 (lower is better) Translates to: GEKLSQPTVPKDCLG*NSHTNHYMKETTET Trigger: GGTCTCCGTTGTTTCCTTCATGTAGTGGTTTGTGTGTGAATTTCATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR TCA 90 bp	GCTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTaGAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATG	+
Preference number: 1 (lower is better) Translates to: ALGCIYKFIFTFQWG*KTVSTNSSQRLSGM Trigger: CATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 90 bp	CCCTCTACTTCCACCCAGGTACAGACAGGTACTAAGATATGCTCTTaGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTGAAA	+
Preference number: 1 (lower is better) Translates to: PSTSTQVQTGTKICS*LYLQVYLHVSMGVK Trigger: TTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCATATCTTAGTACCTGTCTGTACCTGGGTGGAAGTAGAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 90 bp	AAGACCAAAATAGAATACCTATTTACCAGACACACACACGATGACTaGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCAT	+
Preference number: 1 (lower is better) Translates to: KTKIEYLFTRHTHDD*ESRNSQMFTECRGH Trigger: ATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTCATCGTGTGTGTGTCTGGTAAATAGGTATTCTATTTTGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	CACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCACCGAAAGGGGAGGAGGCCTTaGCTCTCTTCTGAGCATCAT	+
Preference number: 2 (lower is better) Translates to: HWAGGNGMASHLWAPSHRKGRRP*LSSEHH Trigger: ATGATGCTCAGAAGAGAGTCAAGGCCTCCTCCCCTT...TCGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	CACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCACCGACCACGGCCAGCCACCTaGACAGTAAAAGATTCCTTC	+
Preference number: 2 (lower is better) Translates to: HWAGGNGMASHLWAPSHRPRPAT*TVKDSF Trigger: GAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGG...TCGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	AGAAACACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCGAATTTCTGCCACAGTaGTCACGGCCGCTCCCTCCA	+
Preference number: 2 (lower is better) Translates to: RNTGPAATGWPPTCGLPPEFLPQ*SRPLPP Trigger: TGGAGGGAGCGGCCGTGACCACTGTGGCAGAAATTC...GGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CAA 90 bp	CCTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTaGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACCTCCG	+
Preference number: 2 (lower is better) Translates to: PPTCGLPPTERWKQG*ENINPFAPQGKPPP Trigger: CGGAGGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CAA 90 bp	CCTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTaGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACAGTGG	+
Preference number: 2 (lower is better) Translates to: PPTCGLPPTERWKQG*ENINPFAPQGKPQW Trigger: CCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
3UTR CAA 90 bp	CTCCCACCGAGCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTaGCTCCCCAGGGGAAGCCACAGTGGTCACGGCCGCTCCCTCCAA	+
Preference number: 2 (lower is better) Translates to: LPPSAGNRVWRTSTH*LPRGSHSGHGRSLQ Trigger: TTGGAGGGAGCGGCCGTGACCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
3UTR-3UTR CCA 90 bp	TGTGTGACTGCCACACATTCAGTGAATGGCCCAAGACAGTCCCAGGTGCCGTGGGAATTTCTGCCACAGTaGTCACGGCCGCTCCCTCCA	+
Preference number: 2 (lower is better) Translates to: CVTATHSVNGPRQSQVPWEFLPQ*SRPLPP Trigger: TGGAGGGAGCGGCCGTGACCACTGTGGCAGAAATTC...CCACGGCACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAGTCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCATGAACGTCAGACCATaGGGAAGGAACGAGAAGGAC	+
Preference number: 2 (lower is better) Translates to: ALETGFGEHQPICSPGEAMNVRP*GRNEKD Trigger: GTCCTTCTCGTTCCTTCCCCATGGTCTGACGTTCAT...GGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	CACGATGACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATATGCACCAGGCAGGGTaGCGTGTGGATGTCTCCAGC	+
Preference number: 2 (lower is better) Translates to: HDDWESRNSQMFTECRGHMHQAG*RVDVSS Trigger: GCTGGAGACATCCACACGTCACCCTGCCTGGTGCAT...ATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCCTGAGCATCATGAACTaGAATTTCTGCCACAGTGGT	+
Preference number: 2 (lower is better) Translates to: ALETGFGEHQPICSPGEALSIMN*NFCHSG Trigger: ACCACTGTGGCAGAAATTCCAGTTCATGATGCTCAG...GGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGACTGCCACACATTCAGTaGATGGCCCAAGACAGTCCC	+
Preference number: 2 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRLPHIQ*MAQDSP Trigger: GGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAG...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGAAAGGGGAGGAGGCCTTaGCTCTCTTCTGAGCATCAT	+
Preference number: 2 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRKGRRP*LSSEHH Trigger: ATGATGCTCAGAAGAGAGTCAAGGCCTCCTCCCCTT...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	CAGGTTAGGCTAAGTTCTACTTGGGGACTCAAGATCAACTTCTTTTGCAGGGAAGCCGTGGACATGGACTaGGGGGCAGCATCAGAACAA	+
Preference number: 2 (lower is better) Translates to: QVRLSSTWGLKINFFCREAVDMD*GAASEQ Trigger: TTGTTCTGATGCTGCCCCTCAGTCCATGTCCACGGC...TTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGCCTAACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	GTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAATGCACCAGGCAGGGTaGCGTGTGGATGTCTCCAGC	+
Preference number: 2 (lower is better) Translates to: VYLHVSMGVKNCLNQQFPMHQAG*RVDVSS Trigger: GCTGGAGACATCCACACGTCACCCTGCCTGGTGCAT...TGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGAACAGAAATCTCTCCCTaGGCCACCAGTCAACCTGTC	+
Preference number: 2 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRTEISP*ATSQPV Trigger: GACAGGTTGACTGGTGGCCCAGGGAGAGATTTCTGT...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	GTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAGCCGTGGACATGGACTaGGGGGCAGCATCAGAACAA	+
Preference number: 2 (lower is better) Translates to: VYLHVSMGVKNCLNQQFPAVDMD*GAASEQ Trigger: TTGTTCTGATGCTGCCCCTCAGTCCATGTCCACGGC...TGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	TCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATCCACGGCCAGCCACCTaGACAGTAAAAGATTCCTTC	+
Preference number: 2 (lower is better) Translates to: SMGVKNCLNQQFPKTVWDPRPAT*TVKDSF Trigger: GAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGG...ATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	CACCAGTCAACCTGTCCTTGCCAAAAACAGAACCTAGAAATGAGCAATTACAAGCAAGACAGTCCCAGGTaGCGTGGACATGGACTGAGG	+
Preference number: 2 (lower is better) Translates to: HQSTCPCQKQNLEMSNYKQDSPR*RGHGLR Trigger: CCTCAGTCCATGTCCACGGCACCTGGGACTGTCTTG...CTTGTAATTGCTCATTTCTAGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	TCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATACCACCTTTCTGCACTaGACACTTGGTGGCTTTGGG	+
Preference number: 2 (lower is better) Translates to: SMGVKNCLNQQFPKTVWDTTFLH*TLGGFG Trigger: CCCAAAGCCACCAAGTGTCCAGTGCAGAAAGGTGGT...ATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGAATGAACGTCAGACCATaGGGAAGGAACGAGAAGGAC	+
Preference number: 2 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRMNVRP*GRNEKD Trigger: GTCCTTCTCGTTCCTTCCCCATGGTCTGACGTTCAT...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	GACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGGATAAGTCACAGGTAGCTTaGAACTCCCTCTGCCCTCTA	+
Preference number: 2 (lower is better) Translates to: DWESRNSQMFTECRGHLDKSQVA*NSLCPL Trigger: TAGAGGGCAGAGGGAGTTTCAAGCTACCTGTGACTT...ATCCAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	CAGTCAACCTGTCCTTGCCAAAAACAGAACCTAGAAATGAGCAATTACAAGAACCAAGACAGTCCCAGGTaGCGTGGACATGGACTGAGG	+
Preference number: 2 (lower is better) Translates to: QSTCPCQKQNLEMSNYKNQDSPR*RGHGLR Trigger: CCTCAGTCCATGTCCACGGCACCTGGGACTGTCTTG...GTTCTTGTAATTGCTCATTTCTAGGTTCTGTTTTTGGCAAGGACAGGTTGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	AGAAATGAGCAATTACAAGAACTATCAGTTTTCTCAGGATGTCCCCAGTGTCCTCAAGACAGTCCCAGGTaGCGTGGACATGGACTGAGG	+
Preference number: 2 (lower is better) Translates to: RNEQLQELSVFSGCPQCPQDSPR*RGHGLR Trigger: CCTCAGTCCATGTCCACGGCACCTGGGACTGTCTTG...AGGACACTGGGGACATCCTGAGAAAACTGATAGTTCTTGTAATTGCTCATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	GATGACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGCACACATTCAGTGAATaGCCCAAGACAGTCCCAGGT	+
Preference number: 2 (lower is better) Translates to: DDWESRNSQMFTECRGHLHTFSE*PKTVPG Trigger: ACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTG...CAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	ACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGATGGAAACCCTGAACTCTGGTTaGAAACAGAAATCTCTCCCT	+
Preference number: 2 (lower is better) Translates to: TRTRGKSVPELSWLPKMETLNSG*KQKSLP Trigger: AGGGAGAGATTTCTGTTTCCAACCAGAGTTCAGGGT...TTCCATCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	GATGACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGGTGTCCTTGTGTGACTaGCACACATTCAGTGAATGG	+
Preference number: 2 (lower is better) Translates to: DDWESRNSQMFTECRGHLVSLCD*HTFSEW Trigger: CCATTCACTGAATGTGTGGCAGTCACACAAGGACAC...CAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGACTGAGCATCATGAACTaGAATTTCTGCCACAGTGGT	+
Preference number: 2 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRLSIMN*NFCHSG Trigger: ACCACTGTGGCAGAAATTCCAGTTCATGATGCTCAG...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	GGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACACAATGCACCAGCTGAGCATCATGAACTaGAATTTCTGCCACAGTGGT	+
Preference number: 2 (lower is better) Translates to: GTQDQLLLQGSTSDTMHQLSIMN*NFCHSG Trigger: ACCACTGTGGCAGAAATTCCAGTTCATGATGCTCAG...CTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	GGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACACAATGCACCAGACCCTGAACTCTGGTTaGAAACAGAAATCTCTCCCT	+
Preference number: 2 (lower is better) Translates to: GTQDQLLLQGSTSDTMHQTLNSG*KQKSLP Trigger: AGGGAGAGATTTCTGTTTCCAACCAGAGTTCAGGGT...CTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	GACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGGATAAAGACTGTCTGGGATaGAATTCACACACAAACCAC	+
Preference number: 2 (lower is better) Translates to: DWESRNSQMFTECRGHLDKDCLG*NSHTNH Trigger: GTGGTTTGTGTGTGAATTTCATCCCAGACAGTCTTT...ATCCAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	CAGGTTAGGCTAAGTTCTACTTGGGGACTCAAGATCAACTTCTTTTGCAGGGAACTGCACCCTGAACTCTaGTTGGAAACAGAAATCTCT	+
Preference number: 2 (lower is better) Translates to: QVRLSSTWGLKINFFCRELHPEL*LETEIS Trigger: AGAGATTTCTGTTTCCAACCAGAGTTCAGGGTGCAG...TTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGCCTAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	CAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCGTGTCCTTGTGTGACTaGCACACATTCAGTGAATGG	+
Preference number: 2 (lower is better) Translates to: QVYLHVSMGVKNCLNQQFVSLCD*HTFSEW Trigger: CCATTCACTGAATGTGTGGCAGTCACACAAGGACAC...GAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	GTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAACCCTGAACTCTGGTTaGAAACAGAAATCTCTCCCT	+
Preference number: 2 (lower is better) Translates to: VYLHVSMGVKNCLNQQFPTLNSG*KQKSLP Trigger: AGGGAGAGATTTCTGTTTCCAACCAGAGTTCAGGGT...TGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	ATGCTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAAACCACCTTTCTGCACTaGACACTTGGTGGCTTTGGG	+
Preference number: 2 (lower is better) Translates to: MLLAVFTSLSSRFNGGEKTTFLH*TLGGFG Trigger: CCCAAAGCCACCAAGTGTCCAGTGCAGAAAGGTGGT...TTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR TCA 90 bp	CAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCAAAGACTGTCTGGGATaGAATTCACACACAAACCAC	+
Preference number: 2 (lower is better) Translates to: QVYLHVSMGVKNCLNQQFKDCLG*NSHTNH Trigger: GTGGTTTGTGTGTGAATTTCATCCCAGACAGTCTTT...GAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR GCA 90 bp	ATGCTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAAGTGTCCTTGTGTGACTaGCACACATTCAGTGAATGG	+
Preference number: 2 (lower is better) Translates to: MLLAVFTSLSSRFNGGEKVSLCD*HTFSEW Trigger: CCATTCACTGAATGTGTGGCAGTCACACAAGGACAC...TTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	ATGCTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGCACCCTGAACTCTaGTTGGAAACAGAAATCTCT	+
Preference number: 2 (lower is better) Translates to: MLLAVFTSLSSRFNGGEKLHPEL*LETEIS Trigger: AGAGATTTCTGTTTCCAACCAGAGTTCAGGGTGCAG...TTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CCA 90 bp	ATGCTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAATTCCCAAAGACTGTCTaGGATGAAATTCACACACAA	+
Preference number: 2 (lower is better) Translates to: MLLAVFTSLSSRFNGGEKFPKTV*DEIHTQ Trigger: TTGTGTGTGAATTTCATCCCAGACAGTCTTTGGGAA...TTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 72 bp	CACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTaGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTT	+
Preference number: 3 (lower is better) Translates to: HWAGGNGMASHL*APSHRALETGF Trigger: AAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR CCA 72 bp	TGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATaGCCTCCCACCTGTGGGCTCCCTCCCACCGAGCGC	+
Preference number: 3 (lower is better) Translates to: CRTRNTGPAATG*PPTCGLPPTER Trigger: GCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR CCA 72 bp	AACATCAACCCATTTGCTCCCCAGGGGAAGCCACAGTaGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCC	+
Preference number: 3 (lower is better) Translates to: NINPFAPQGKPQ*SRPLPPKPRPA Trigger: GGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
3UTR CCA 72 bp	GTGGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTTaGAGAACATCAACCCATTTGCTCCCCAGGGGAAGC	+
Preference number: 3 (lower is better) Translates to: VGSLPPSAGNRV*RTSTHLLPRGS Trigger: GCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR TCA 72 bp	CAGGGAAGCACAAGTGACACAATGCACCAGGCAGGGTaGCGTGTGGATGTCTCCAGCCTCGACCCCATGTGC	+
Preference number: 3 (lower is better) Translates to: QGSTSDTMHQAG*RVDVSSLDPMC Trigger: GCACATGGGGTCGAGGCTGGAGACATCCACACGTCACCCTGCCTGGTGCATTGTGTCACTTGTGCTTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 72 bp	TCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTaGACAGTAAAAGATTCCTTCCCACACGTGGGATTC	+
Preference number: 3 (lower is better) Translates to: SRPLPPKPRPAT*TVKDSFPHVGF Trigger: GAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 72 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTaGTCCCCAGGGGAAGCCACAGTGGTCACGGCCGCT	+
Preference number: 3 (lower is better) Translates to: ALETGFGEHQPI*SPGEATVVTAA Trigger: AGCGGCCGTGACCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
3UTR CCA 72 bp	TGGCCTCCCACCTGTGGGCTCCCTCCCACCGAGCGCTaGAAACAGGGTTTGGAGAACATCAACCCATTTGCT	+
Preference number: 3 (lower is better) Translates to: WPPTCGLPPTER*KQGLENINPFA Trigger: AGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAGGTGGGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR CCA 72 bp	TCTTCTGAGCATCATGAACTGGAATTTCTGCCACAGTaGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCC	+
Preference number: 3 (lower is better) Translates to: SSEHHELEFLPQ*SRPLPPKPRPA Trigger: GGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCACTGTGGCAGAAATTCCAGTTCATGATGCTCAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 72 bp	CCAGTGTCCTTGTGTGACTGCCACACATTCAGTGAATaGCCCAAGACAGTCCCAGGTGCCGTGGACATGGAC	+
Preference number: 3 (lower is better) Translates to: PVSLCDCHTFSE*PKTVPGAVDMD Trigger: GTCCATGTCCACGGCACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAGTCACACAAGGACACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR TCA 72 bp	CAAAGGCTGGTCCTGGGACCCAGTAATACACATGCATaGACGTCAGACCATGGGGAAGGAACGAGAAGGACA	+
Preference number: 3 (lower is better) Translates to: QRLVLGPSNTHA*TSDHGEGTRRT Trigger: TGTCCTTCTCGTTCCTTCCCCATGGTCTGACGTTCATGCATGTGTATTACTGGGTCCCAGGACCAGCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR TCA 72 bp	ACAGTAACCTCTACCACACACAAGTCACAGGTAGCTTaGAACTCCCTCTGCCCTCTACTTCCACCCAGGTAC	+
Preference number: 3 (lower is better) Translates to: TVTSTTHKSQVA*NSLCPLLPPRY Trigger: GTACCTGGGTGGAAGTAGAGGGCAGAGGGAGTTTCAAGCTACCTGTGACTTGTGTGTGGTAGAGGTTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 72 bp	CACCCTGAACTCTGGTTGGAAACAGAAATCTCTCCCTaGGCCACCAGTCAACCTGTCCTTGCCAAAAACAGA	+
Preference number: 3 (lower is better) Translates to: HPELWLETEISP*ATSQPVLAKNR Trigger: TCTGTTTTTGGCAAGGACAGGTTGACTGGTGGCCCAGGGAGAGATTTCTGTTTCCAACCAGAGTTCAGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR TCA 72 bp	GACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTaGCACAATGCACCAGGCAGGGTGACGTGTGGATGT	+
Preference number: 3 (lower is better) Translates to: DSRSTSFAGKHK*HNAPGRVTCGC Trigger: ACATCCACACGTCACCCTGCCTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 72 bp	AAAAATATCTTTGAGGTTAGCCTCTCCGGTTCAAAGTaGAGAACTAGAAACACTGGGCCGGCGGCAACGGGA	+
Preference number: 3 (lower is better) Translates to: KNIFEVSLSGSK*RTRNTGPAATG Trigger: TCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGAGAGGCTAACCTCAAAGATATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 72 bp	CCTGCTGCTCTCCCACAGGTTAGGCTAAGTTCTACTTaGGGACTCAAGATCAACTTCTTTTGCAGGGAAGCA	+
Preference number: 3 (lower is better) Translates to: PAALPQVRLSST*GLKINFFCREA Trigger: TGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGCCTAACCTGTGGGAGAGCAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 72 bp	ACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTaGCTTCCCAAGATGGAAAACAGCGTAACTTCCTAC	+
Preference number: 3 (lower is better) Translates to: TRTRGKSVPELS*LPKMENSVTSY Trigger: GTAGGAAGTTACGCTGTTTTCCATCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 72 bp	GAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTaGATGAAAGGGGAAAGGCACTGTGTCCCTCTAGGA	+
Preference number: 3 (lower is better) Translates to: EILKCSPSVVVI*MKGERHCVPLG Trigger: TCCTAGAGGGACACAGTGCCTTTCCCCTTTCATCCAGATGACCACGACACTCGGTGAACATTTGAGAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CAA 90 bp	CACCAGTCAACCTGTCCTTGCCAAAAACAGAACCTAGAAATGAGCAATTACAAGATGTCCCCAGTGTCCTaGTGTGACTGCCACACATTC	+
Preference number: 3 (lower is better) Translates to: HQSTCPCQKQNLEMSNYKMSPVS*CDCHTF Trigger: GAATGTGTGGCAGTCACACAAGGACACTGGGGACAT...CTTGTAATTGCTCATTTCTAGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 72 bp	CTAAGTTCTACTTGGGGACTCAAGATCAACTTCTTTTaGAGGGAAGCACAAGTGACACAATGCACCAGGCAG	+
Preference number: 3 (lower is better) Translates to: LSSTWGLKINFF*REAQVTQCTRQ Trigger: CTGCCTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CCA 72 bp	GCCACCTCCGGAGTCCCCAAAGCATGCACTGTTAACTaGCATCAGGTTATTCAGAGTGACAAACTTTGTAAT	+
Preference number: 3 (lower is better) Translates to: ATSGVPKACTVN*HQVIQSDKLCN Trigger: ATTACAAAGTTTGTCACTCTGAATAACCTGATGCCAGTTAACAGTGCATGCTTTGGGGACTCCGGAGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR-3UTR CAA 90 bp	TCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATCAAGATCAACTTCTTTaGCAGGGAAGCACAAGTGAC	+
Preference number: 3 (lower is better) Translates to: SMGVKNCLNQQFPKTVWDQDQLL*QGSTSD Trigger: GTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTG...ATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 72 bp	AGAAATCTCTCCCTGGGCCACCAGTCAACCTGTCCTTaGCAAAAACAGAACCTAGAAATGAGCAATTACAAG	+
Preference number: 3 (lower is better) Translates to: RNLSLGHQSTCP*QKQNLEMSNYK Trigger: CTTGTAATTGCTCATTTCTAGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTGGCCCAGGGAGAGATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR TCA 72 bp	CTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATaGAATTCACACACAAACCACTACATGAAGGAAACA	+
Preference number: 3 (lower is better) Translates to: LSQPTVPKDCLG*NSHTNHYMKET Trigger: TGTTTCCTTCATGTAGTGGTTTGTGTGTGAATTTCATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR-3UTR CAA 90 bp	CAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCAAGATCAACTTCTTTaGCAGGGAAGCACAAGTGAC	+
Preference number: 3 (lower is better) Translates to: QVYLHVSMGVKNCLNQQFQDQLL*QGSTSD Trigger: GTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTG...GAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR GCA 72 bp	TCTACTTCCACCCAGGTACAGACAGGTACTAAGATATaGTCTTGGCTGTATTTACAAGTTTATCTTCACGTT	+
Preference number: 3 (lower is better) Translates to: STSTQVQTGTKI*SWLYLQVYLHV Trigger: AACGTGAAGATAAACTTGTAAATACAGCCAAGAGCATATCTTAGTACCTGTCTGTACCTGGGTGGAAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR CCA 72 bp	TCCACCCAGGTACAGACAGGTACTAAGATATGCTCTTaGCTGTATTTACAAGTTTATCTTCACGTTTCAATG	+
Preference number: 3 (lower is better) Translates to: STQVQTGTKICS*LYLQVYLHVSM Trigger: CATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCATATCTTAGTACCTGTCTGTACCTGGGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
3UTR TCA 72 bp	TGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTaGAAAACTGTCTCAACCAACAGTTCCCAAAGACTG	+
Preference number: 3 (lower is better) Translates to: CIYKFIFTFQWG*KTVSTNSSQRL Trigger: CAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	ACACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCACCGGTCTCCGTGTCTGGATaGTTTTGGGCTTGGGTCTCT	+
Preference number: 4 (lower is better) Translates to: TLGRRQRDGLPPVGSLPPVSVSG*FWAWVS Trigger: AGAGACCCAAGCCCAAAATCATCCAGACACGGAGAC...CGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	AGAAACACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCACTGTTTGTCGGGATTaGGCGGAGCCAGGTGTGAAC	+
Preference number: 4 (lower is better) Translates to: RNTGPAATGWPPTCGLPPTVCRD*AEPGVN Trigger: GTTCACACCTGGCTCCGCCCAATCCCGACAAACAGT...GGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCCCGGTGGCAGGCGATGGTaGCGCTCGGCAGGTCCTGCA	+
Preference number: 4 (lower is better) Translates to: AAPSKATASHLHSKRFLPGGRRW*RSAGPA Trigger: TGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACC...GGGAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TGGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATGGTGGCAGGCGATGGTaGCGCTCGGCAGGTCCTGCA	+
Preference number: 4 (lower is better) Translates to: WSRPLPPKPRPATCTVKDGGRRW*RSAGPA Trigger: TGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACC...ATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCCGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTG	+
Preference number: 4 (lower is better) Translates to: RPLPPKPRPATCTVKDSFRGPPH*EWCLSL Trigger: CAGCGACAGACACCACTCCCAGTGTGGTGGTCCACG...GAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TGGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATCGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTG	+
Preference number: 4 (lower is better) Translates to: WSRPLPPKPRPATCTVKDRGPPH*EWCLSL Trigger: CAGCGACAGACACCACTCCCAGTGTGGTGGTCCACG...ATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCACCGAGTGTCGTGGTCATCTGGATGAAAGGGGAAAGGCACTGTGTCCCTCTAACGCGCGGGTCCAGGTaGCAGGCGATGGTGGCGCTC	+
Preference number: 4 (lower is better) Translates to: SPSVVVIWMKGERHCVPLTRGSR*QAMVAL Trigger: GAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGT...TAGAGGGACACAGTGCCTTTCCCCTTTCATCCAGATGACCACGACACTCGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCCGGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATGGCCTCGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTG	+
Preference number: 4 (lower is better) Translates to: SGSKCRTRNTGPAATGWPRGPPH*EWCLSL Trigger: CAGCGACAGACACCACTCCCAGTGTGGTGGTCCACG...AGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
3UTR CAA 72 bp	AGCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTaGCTCCCCAGGGGAAGCCACAGTGGTCACGGCCGC	+
Preference number: 4 (lower is better) Translates to: SAGNRVWRTSTH*LPRGSHSGHGR Trigger: GCGGCCGTGACCACTGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231813.2
CDS-3UTR TCA 90 bp	GTGGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGAGTCTCCGTGTCTGGATaGTTTTGGGCTTGGGTCTCT	+
Preference number: 4 (lower is better) Translates to: VVTAAPSKATASHLHSKRVSVSG*FWAWVS Trigger: AGAGACCCAAGCCCAAAATCATCCAGACACGGAGAC...TCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCTGTGCAGCCGCAGCCTaGCATCGGCTGCAGATAAGG	+
Preference number: 4 (lower is better) Translates to: ALETGFGEHQPICSPGEACAAAA*HRLQIR Trigger: CCTTATCTGCAGCCGATGCCAGGCTGCGGCTGCACA...GGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TGGTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATACTGTTTGTCGGGATTaGGCGGAGCCAGGTGTGAAC	+
Preference number: 4 (lower is better) Translates to: WSRPLPPKPRPATCTVKDTVCRD*AEPGVN Trigger: GTTCACACCTGGCTCCGCCCAATCCCGACAAACAGT...ATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	AGAAACACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCGCCCCAGCTTGGAGATaGCATATAAAAGATCGTAAT	+
Preference number: 4 (lower is better) Translates to: RNTGPAATGWPPTCGLPPAPAWR*HIKDRN Trigger: ATTACGATCTTTTATATGCCATCTCCAAGCTGGGGC...GGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCTCACTCTCACACACGTaGACCACCACACTGGGAGTG	+
Preference number: 4 (lower is better) Translates to: RPLPPKPRPATCTVKDSFSLSHT*TTTLGV Trigger: CACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGA...GAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	CGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCGTCTCCGTGTCTGGATaGTTTTGGGCTTGGGTCTCT	+
Preference number: 4 (lower is better) Translates to: RPLPPKPRPATCTVKDSFVSVSG*FWAWVS Trigger: AGAGACCCAAGCCCAAAATCATCCAGACACGGAGAC...GAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CTCCCTCCCACCGAGCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTG	+
Preference number: 4 (lower is better) Translates to: LPPTERWKQGLENINPFARGPPH*EWCLSL Trigger: CAGCGACAGACACCACTCCCAGTGTGGTGGTCCACG...AGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCCGGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATGGCCTTCACTCTCACACACGTaGACCACCACACTGGGAGTG	+
Preference number: 4 (lower is better) Translates to: SGSKCRTRNTGPAATGWPSLSHT*TTTLGV Trigger: CACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGA...AGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGAACGCGCGGGTCCAGGTaGCAGGCGATGGTGGCGCTC	+
Preference number: 4 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRTRGSR*QAMVAL Trigger: GAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGT...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	AAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGTCTGCGCGCCGGGTCTCCGTGTCTGGATaGTTTTGGGCTTGGGTCTCT	+
Preference number: 4 (lower is better) Translates to: KDSFPHVGFRALSQSARRVSVSG*FWAWVS Trigger: AGAGACCCAAGCCCAAAATCATCCAGACACGGAGAC...CCGGCGCGCAGACTGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	AAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGTCTGCGCGCCGGTTCATACTTCTCTCCTaGCCCCAGCTTGGAGATGGC	+
Preference number: 4 (lower is better) Translates to: KDSFPHVGFRALSQSARRFILLS*PQLGDG Trigger: GCCATCTCCAAGCTGGGGCCAGGAGAGAAGTATGAA...CCGGCGCGCAGACTGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCTCCGGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATGGCTTCATACTTCTCTCCTaGCCCCAGCTTGGAGATGGC	+
Preference number: 4 (lower is better) Translates to: SPVQSAELETLGRRQRDGFILLS*PQLGDG Trigger: GCCATCTCCAAGCTGGGGCCAGGAGAGAAGTATGAA...GCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TGTGTGACTGCCACACATTCAGTGAATGGCCCAAGACAGTCCCAGGTGCCGTGGTCACTCTCACACACGTaGACCACCACACTGGGAGTG	+
Preference number: 4 (lower is better) Translates to: CVTATHSVNGPRQSQVPWSLSHT*TTTLGV Trigger: CACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGA...CCACGGCACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAGTCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR GCA 90 bp	CTGTGGGCTCCCTCCCACCGAGCGCTGGAAACAGGGTTTGGAGAACATCAACCCGTGTCTGTCGCTGCATaGAGTTCATACTTCTCTCCT	+
Preference number: 4 (lower is better) Translates to: LWAPSHRALETGFGEHQPVSVAA*SSYFSP Trigger: AGGAGAGAAGTATGAACTGCATGCAGCGACAGACAC...GGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAGCCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR GCA 90 bp	AAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGATGGGCGCTCGGCAGGTCCTaGAGATCCACCTCCTCCATC	+
Preference number: 4 (lower is better) Translates to: KRGHVVRVFQNFPGFPRWALGRS*RSTSSI Trigger: GATGGAGGAGGTGGATCTGCAGGACCTGCCGAGCGC...CCATCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS-3UTR CCA 90 bp	GTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGTCTGCGCGCACTGTTTGTCGGGATTaGGCGGAGCCAGGTGTGAAC	+
Preference number: 4 (lower is better) Translates to: VKDSFPHVGFRALSQSARTVCRD*AEPGVN Trigger: GTTCACACCTGGCTCCGCCCAATCCCGACAAACAGT...GCGCGCAGACTGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGTCTGCCGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTG	+
Preference number: 4 (lower is better) Translates to: HSKRFLPTRGIQSAVSVCRGPPH*EWCLSL Trigger: CAGCGACAGACACCACTCCCAGTGTGGTGGTCCACG...GCAGACTGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCCTTGTGTGACTGCCACACATTCAGTGAATGGCCCAAGACAGTCCCAGGTGCCTCACTCTCACACACGTaGACCACCACACTGGGAGTG	+
Preference number: 4 (lower is better) Translates to: SLCDCHTFSEWPKTVPGASLSHT*TTTLGV Trigger: CACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGA...GGCACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAGTCACACAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCCGGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATGGCCTTCCTCCTCATTCTCTTaGTCACTCTCACACACGTGG	+
Preference number: 4 (lower is better) Translates to: SGSKCRTRNTGPAATGWPSSSFS*SLSHTW Trigger: CCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGA...AGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACCAGAGGGATTCAAATTTaGCCCGGCACAGGCCGTCCA	+
Preference number: 4 (lower is better) Translates to: LETGFGEHQPICSPGEATRGIQI*PGTGRP Trigger: TGGACGGCCTGTGCCGGGCCAAATTTGAATCCCTCT...GGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACAGAGGGATTCAAATTTaGCCCGGCACAGGCCGTCCA	+
Preference number: 4 (lower is better) Translates to: AGNRVWRTSTHLLPRGSHRGIQI*PGTGRP Trigger: TGGACGGCCTGTGCCGGGCCAAATTTGAATCCCTCT...GTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	GACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGGATCCATCTCGCAGTCGATaGAGCTCCAGTCGCCGCCGC	+
Preference number: 4 (lower is better) Translates to: DWESRNSQMFTECRGHLDPSRSR*SSSRRR Trigger: GCGGCGGCGACTGGAGCTTCATCGACTGCGAGATGG...ATCCAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS-3UTR CCA 90 bp	GCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACTTCATACTTCTCTCCTaGCCCCAGCTTGGAGATGGC	+
Preference number: 4 (lower is better) Translates to: AGNRVWRTSTHLLPRGSHFILLS*PQLGDG Trigger: GCCATCTCCAAGCTGGGGCCAGGAGAGAAGTATGAA...GTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCCCACACGTGGGTCCTCCTCATTCTCTTaGTCACTCTCACACACGTGG	+
Preference number: 4 (lower is better) Translates to: SKATASHLHSKRFLPTRGSSSFS*SLSHTW Trigger: CCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGA...CCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCTCCTCCTCATTCTCTTaGTCACTCTCACACACGTGG	+
Preference number: 4 (lower is better) Translates to: ALETGFGEHQPICSPGEASSSFS*SLSHTW Trigger: CCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGA...GGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR GCA 90 bp	TCTCCGGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATGGCGAAGACATCATCGTTTaGCACACAAGCAATCAGGGA	+
Preference number: 4 (lower is better) Translates to: SPVQSAELETLGRRQRDGEDIIV*HTSNQG Trigger: TCCCTGATTGCTTGTGTGGCAAACGATGATGTCTTC...GCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023672.10
CDS-3UTR CCA 90 bp	CAGAAATCTCTCCCTGGGCCACCAGTCAACCTGTCCTTGCCAAAAACAGAACCTTCACTCTCACACACGTaGACCACCACACTGGGAGTG	+
Preference number: 4 (lower is better) Translates to: QKSLPGPPVNLSLPKTEPSLSHT*TTTLGV Trigger: CACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGA...AGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTGGCCCAGGGAGAGATTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CTCCCTCCCACCGAGCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTTCCTCCTCATTCTCTTaGTCACTCTCACACACGTGG	+
Preference number: 4 (lower is better) Translates to: LPPTERWKQGLENINPFASSSFS*SLSHTW Trigger: CCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGA...AGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	GTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGTCTGCGCGCTGGTCTCACTTTCGCTaGAGACATCATCGTTTGCCA	+
Preference number: 4 (lower is better) Translates to: VKDSFPHVGFRALSQSARWSHFR*RHHRLP Trigger: TGGCAAACGATGATGTCTTCAGCGAAAGTGAGACCA...GCGCGCAGACTGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023672.10
CDS-3UTR TCA 90 bp	GTCACGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCCTTGTCATATGTTCTaGAGAGGGATTCAAATTTGG	+
Preference number: 4 (lower is better) Translates to: VTAAPSKATASHLHSKRFPCHMF*RGIQIW Trigger: CCAAATTTGAATCCCTCTTCAGAACATATGACAAGG...GAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	GCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCCCCCTTGTCATATGTTCTaGAGAGGGATTCAAATTTGG	+
Preference number: 4 (lower is better) Translates to: AAPSKATASHLHSKRFLPPCHMF*RGIQIW Trigger: CCAAATTTGAATCCCTCTTCAGAACATATGACAAGG...GGGAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACAGAGGGATTCAAATTTaGCCCTGGTCTCACTTTCGC	+
Preference number: 4 (lower is better) Translates to: AGNRVWRTSTHLLPRGSHRGIQI*PWSHFR Trigger: GCGAAAGTGAGACCAGGGCCAAATTTGAATCCCTCT...GTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023672.10
CDS-3UTR CCA 90 bp	GGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACACAATGCACCAGACTGTTTGTCGGGATTaGGCGGAGCCAGGTGTGAAC	+
Preference number: 4 (lower is better) Translates to: GTQDQLLLQGSTSDTMHQTVCRD*AEPGVN Trigger: GTTCACACCTGGCTCCGCCCAATCCCGACAAACAGT...CTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACACAATGCACCAGTCACTCTCACACACGTaGACCACCACACTGGGAGTG	+
Preference number: 4 (lower is better) Translates to: GTQDQLLLQGSTSDTMHQSLSHT*TTTLGV Trigger: CACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGA...CTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CACCTGCACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCATCCTCCTCATTCTCTTaGTCACTCTCACACACGTGG	+
Preference number: 4 (lower is better) Translates to: HLHSKRFLPTRGIQSAVSSSSFS*SLSHTW Trigger: CCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGA...TGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR GCA 90 bp	CACCTGCACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGTGTCTGTCGCTGCATaGAGTTCATACTTCTCTCCT	+
Preference number: 4 (lower is better) Translates to: HLHSKRFLPTRGIQSAVSVSVAA*SSYFSP Trigger: AGGAGAGAAGTATGAACTGCATGCAGCGACAGACAC...TGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	CTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACCGCCCCAGCTTGGAGATaGCATATAAAAGATCGTAAT	+
Preference number: 4 (lower is better) Translates to: LETGFGEHQPICSPGEATAPAWR*HIKDRN Trigger: ATTACGATCTTTTATATGCCATCTCCAAGCTGGGGC...GGTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GCCAGCCACCTGCACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGCCCCAGCTTGGAGATaGCATATAAAAGATCGTAAT	+
Preference number: 4 (lower is better) Translates to: ASHLHSKRFLPTRGIQSAAPAWR*HIKDRN Trigger: ATTACGATCTTTTATATGCCATCTCCAAGCTGGGGC...AGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTGGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	CTCCCTCCCACCGAGCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCTTGTCATATGTTCTaGAGAGGGATTCAAATTTGG	+
Preference number: 4 (lower is better) Translates to: LPPTERWKQGLENINPFAPCHMF*RGIQIW Trigger: CCAAATTTGAATCCCTCTTCAGAACATATGACAAGG...AGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGCTCGGTGGGAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGGATTTCATACTTCTCTCCTaGCCCCAGCTTGGAGATGGC	+
Preference number: 4 (lower is better) Translates to: DWESRNSQMFTECRGHLDFILLS*PQLGDG Trigger: GCCATCTCCAAGCTGGGGCCAGGAGAGAAGTATGAA...ATCCAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	ACCTGCACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCAGGCCCCAGCTTGGAGATaGCATATAAAAGATCGTAAT	+
Preference number: 4 (lower is better) Translates to: TCTVKDSFPHVGFRALSQAPAWR*HIKDRN Trigger: ATTACGATCTTTTATATGCCATCTCCAAGCTGGGGC...CTGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CAA 72 bp	GCTAAGTTCTACTTGGGGACTCAAGATCAACTTCTTTaGCAGGGAAGCACAAGTGACACAATGCACCAGGCA	+
Preference number: 4 (lower is better) Translates to: AKFYLGTQDQLL*QGSTSDTMHQA Trigger: TGCCTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	CAGGTTAGGCTAAGTTCTACTTGGGGACTCAAGATCAACTTCTTTTGCAGGGAACAGATAAGGGGTTGCTaGAGTTTATCCGGACACGTT	+
Preference number: 4 (lower is better) Translates to: QVRLSSTWGLKINFFCREQIRGC*SLSGHV Trigger: AACGTGTCCGGATAAACTTCAGCAACCCCTTATCTG...TTCCCTGCAAAAGAAGTTGATCTTGAGTCCCCAAGTAGAACTTAGCCTAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	ACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGATGGAAAAGCTCTTAAAATACTaGAAGGTGGTGTCCTTGTCA	+
Preference number: 4 (lower is better) Translates to: TRTRGKSVPELSWLPKMEKLLKY*KVVSLS Trigger: TGACAAGGACACCACCTTCCAGTATTTTAAGAGCTT...TTCCATCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	AAACAGAACCTAGAAATGAGCAATTACAAGAACTATCAGTTTTCTCAGGATGTCCGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTG	+
Preference number: 4 (lower is better) Translates to: KQNLEMSNYKNYQFSQDVRGPPH*EWCLSL Trigger: CAGCGACAGACACCACTCCCAGTGTGGTGGTCCACG...GACATCCTGAGAAAACTGATAGTTCTTGTAATTGCTCATTTCTAGGTTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
3UTR CAA 72 bp	CAGAAATCTCTCCCTGGGCCACCAGTCAACCTGTCCTaGCCAAAAACAGAACCTAGAAATGAGCAATTACAA	+
Preference number: 4 (lower is better) Translates to: QKSLPGPPVNLS*PKTEPRNEQLQ Trigger: TTGTAATTGCTCATTTCTAGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTGGCCCAGGGAGAGATTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GGGACTCAAGATCAACTTCTTTTGCAGGGAAGCACAAGTGACACAATGCACCAGAAGCTCTTAAAATACTaGAAGGTGGTGTCCTTGTCA	+
Preference number: 4 (lower is better) Translates to: GTQDQLLLQGSTSDTMHQKLLKY*KVVSLS Trigger: TGACAAGGACACCACCTTCCAGTATTTTAAGAGCTT...CTGGTGCATTGTGTCACTTGTGCTTCCCTGCAAAAGAAGTTGATCTTGAGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	GATGACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGGCCCCAGCTTGGAGATaGCATATAAAAGATCGTAAT	+
Preference number: 4 (lower is better) Translates to: DDWESRNSQMFTECRGHLAPAWR*HIKDRN Trigger: ATTACGATCTTTTATATGCCATCTCCAAGCTGGGGC...CAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR TCA 90 bp	ATGCTCTTGGCTGTATTTACAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAAGTCTCCGTGTCTGGATaGTTTTGGGCTTGGGTCTCT	+
Preference number: 4 (lower is better) Translates to: MLLAVFTSLSSRFNGGEKVSVSG*FWAWVS Trigger: AGAGACCCAAGCCCAAAATCATCCAGACACGGAGAC...TTTTTCACCCCCATTGAAACGTGAAGATAAACTTGTAAATACAGCCAAGAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR GCA 90 bp	CAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCGTGTCTGTCGCTGCATaGAGTTCATACTTCTCTCCT	+
Preference number: 4 (lower is better) Translates to: QVYLHVSMGVKNCLNQQFVSVAA*SSYFSP Trigger: AGGAGAGAAGTATGAACTGCATGCAGCGACAGACAC...GAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	TCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATAAGCTCTTAAAATACTaGAAGGTGGTGTCCTTGTCA	+
Preference number: 4 (lower is better) Translates to: SMGVKNCLNQQFPKTVWDKLLKY*KVVSLS Trigger: TGACAAGGACACCACCTTCCAGTATTTTAAGAGCTT...ATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CCA 90 bp	AAACAGAACCTAGAAATGAGCAATTACAAGAACTATCAGTTTTCTCAGGATGTCTTCATACTTCTCTCCTaGCCCCAGCTTGGAGATGGC	+
Preference number: 4 (lower is better) Translates to: KQNLEMSNYKNYQFSQDVFILLS*PQLGDG Trigger: GCCATCTCCAAGCTGGGGCCAGGAGAGAAGTATGAA...GACATCCTGAGAAAACTGATAGTTCTTGTAATTGCTCATTTCTAGGTTCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR GCA 90 bp	AAACAGAACCTAGAAATGAGCAATTACAAGAACTATCAGTTTTCTCAGGATGTCGTGTCTGTCGCTGCATaGAGTTCATACTTCTCTCCT	+
Preference number: 4 (lower is better) Translates to: KQNLEMSNYKNYQFSQDVVSVAA*SSYFSP Trigger: AGGAGAGAAGTATGAACTGCATGCAGCGACAGACAC...GACATCCTGAGAAAACTGATAGTTCTTGTAATTGCTCATTTCTAGGTTCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS GCA 90 bp	AGAGAAGGGCGCGAAGGGCCGCAGAGTCACCCTACGGGGCGCCCGTaGCTCGACCGCCTCCGCCACCTCTCCGAGCCGCGGCCCGGCCAC	+
Preference number: 5 (lower is better) Translates to: REGREGPQSHPTGRP*LDRLRHLSEPRPGH Trigger: GTGGCCGGGCCGCGGCTCGGAGAGGTGGCGGAGGCGGTCGAGGCACGGGCGCCCCGTAGGGTGACTCTGCGGCCCTTCGCGCCCTTCTCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS CCA 90 bp	GGCACAGGCCGTCCACGAACACGCGCGGGTCCAGGTGGCAGGCGATaGTGGCGCTCGGCAGGTCCTGCAGATCCACCTCCTCCATCTCGC	+
Preference number: 5 (lower is better) Translates to: GTGRPRTRAGPGGRR*WRSAGPADPPPPSR Trigger: GCGAGATGGAGGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGTGTTCGTGGACGGCCTGTGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS CCA 90 bp	AATTTGGCCCGGCACAGGCCGTCCACGAACACGCGCGGGTCCAGGTaGCAGGCGATGGTGGCGCTCGGCAGGTCCTGCAGATCCACCTCC	+
Preference number: 5 (lower is better) Translates to: NLARHRPSTNTRGSR*QAMVALGRSCRSTS Trigger: GGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGTGTTCGTGGACGGCCTGTGCCGGGCCAAATT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS CCA 90 bp	ACAGGCCGTCCACGAACACGCGCGGGTCCAGGTGGCAGGCGATGGTaGCGCTCGGCAGGTCCTGCAGATCCACCTCCTCCATCTCGCAGT	+
Preference number: 5 (lower is better) Translates to: TGRPRTRAGPGGRRW*RSAGPADPPPPSRS Trigger: ACTGCGAGATGGAGGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGTGTTCGTGGACGGCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS GCA 90 bp	ACGCGCGGGTCCAGGTGGCAGGCGATGGTGGCGCTCGGCAGGTCCTaGAGATCCACCTCCTCCATCTCGCAGTCGATGAAGCTCCAGTCG	+
Preference number: 5 (lower is better) Translates to: TRGSRWQAMVALGRS*RSTSSISQSMKLQS Trigger: CGACTGGAGCTTCATCGACTGCGAGATGGAGGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS-3UTR CAA 90 bp	ACACTGGGCCGGCGGCAACGGGATGGCCTCCCACCTGTGGGCTCCCTCCCACCGCGTGTCTGGATGATTTaGGGCTTGGGTCTCTTCATT	+
Preference number: 5 (lower is better) Translates to: TLGRRQRDGLPPVGSLPPRVWMI*GLGLFI Trigger: AATGAAGAGACCCAAGCCCAAAATCATCCAGACACG...CGGTGGGAGGGAGCCCACAGGTGGGAGGCCATCCCGTTGCCGCCGGCCCAGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	TCCGGTTCAAAGTGCAGAACTAGAAACACTGGGCCGGCGGCAACGGGATGGCCTCCCAGGAACTCGGTCTaGTGCAGCCGCAGCCTGGCA	+
Preference number: 5 (lower is better) Translates to: SGSKCRTRNTGPAATGWPPRNSV*CSRSLA Trigger: TGCCAGGCTGCGGCTGCACAAGACCGAGTTCCTGGG...AGGCCATCCCGTTGCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	GCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCCCAACTGTTTGTCGGGATaGGGCGGAGCCAGGTGTGAA	+
Preference number: 5 (lower is better) Translates to: AAPSKATASHLHSKRFLPNCLSG*GGARCE Trigger: TTCACACCTGGCTCCGCCCAATCCCGACAAACAGTT...GGGAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	CGGCCGCTCCCTCCAAAGCCACGGCCAGCCACCTGCACAGTAAAAGATTCCTTCTCTCCTGGCCCCAGCTaGGAGATGGCATATAAAAGA	+
Preference number: 5 (lower is better) Translates to: RPLPPKPRPATCTVKDSFSPGPS*EMAYKR Trigger: TCTTTTATATGCCATCTCCAAGCTGGGGCCAGGAGA...GAAGGAATCTTTTACTGTGCAGGTGGCTGGCCGTGGCTTTGGAGGGAGCGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	GCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCACAACTGTTTGTCGGGATaGGGCGGAGCCAGGTGTGAA	+
Preference number: 5 (lower is better) Translates to: AGNRVWRTSTHLLPRGSHNCLSG*GGARCE Trigger: TTCACACCTGGCTCCGCCCAATCCCGACAAACAGTT...GTGGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	TCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCCCAAAGACTGTCTGGGATCCCAGGAACTCGGTCTaGTGCAGCCGCAGCCTGGCA	+
Preference number: 5 (lower is better) Translates to: SMGVKNCLNQQFPKTVWDPRNSV*CSRSLA Trigger: TGCCAGGCTGCGGCTGCACAAGACCGAGTTCCTGGG...ATCCCAGACAGTCTTTGGGAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCTCTCCTGGCCCCAGCTaGGAGATGGCATATAAAAGA	+
Preference number: 5 (lower is better) Translates to: ALETGFGEHQPICSPGEASPGPS*EMAYKR Trigger: TCTTTTATATGCCATCTCCAAGCTGGGGCCAGGAGA...GGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	TCCTTGTGTGACTGCCACACATTCAGTGAATGGCCCAAGACAGTCCCAGGTGCCTCTCCTGGCCCCAGCTaGGAGATGGCATATAAAAGA	+
Preference number: 5 (lower is better) Translates to: SLCDCHTFSEWPKTVPGASPGPS*EMAYKR Trigger: TCTTTTATATGCCATCTCCAAGCTGGGGCCAGGAGA...GGCACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAGTCACACAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	GCGCTGGAAACAGGGTTTGGAGAACATCAACCCATTTGCTCCCCAGGGGAAGCCCGTGTCTGGATGATTTaGGGCTTGGGTCTCTTCATT	+
Preference number: 5 (lower is better) Translates to: ALETGFGEHQPICSPGEARVWMI*GLGLFI Trigger: AATGAAGAGACCCAAGCCCAAAATCATCCAGACACG...GGCTTCCCCTGGGGAGCAAATGGGTTGATGTTCTCCAAACCCTGTTTCCAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	TGTGTGACTGCCACACATTCAGTGAATGGCCCAAGACAGTCCCAGGTGCCGTGGCGTGTCTGGATGATTTaGGGCTTGGGTCTCTTCATT	+
Preference number: 5 (lower is better) Translates to: CVTATHSVNGPRQSQVPWRVWMI*GLGLFI Trigger: AATGAAGAGACCCAAGCCCAAAATCATCCAGACACG...CCACGGCACCTGGGACTGTCTTGGGCCATTCACTGAATGTGTGGCAGTCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS CCA 90 bp	GGTCTCTTCATTCTCTCCATCTCTTCCTCTTCCTCCTCATTCTCTTaGTCACTCTCACACACGTGGACCACCACACTGGGAGTGGTGTCT	+
Preference number: 5 (lower is better) Translates to: GLFILSISSSSSSFS*SLSHTWTTTLGVVS Trigger: AGACACCACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGAAGAGGAAGAGATGGAGAGAATGAAGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	CACCAGTCAACCTGTCCTTGCCAAAAACAGAACCTAGAAATGAGCAATTACAAGCCCAGGAACTCGGTCTaGTGCAGCCGCAGCCTGGCA	+
Preference number: 5 (lower is better) Translates to: HQSTCPCQKQNLEMSNYKPRNSV*CSRSLA Trigger: TGCCAGGCTGCGGCTGCACAAGACCGAGTTCCTGGG...CTTGTAATTGCTCATTTCTAGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	CACCTGCACAGTAAAAGATTCCTTCCCACACGTGGGATTCAGAGCGCTGTCTCACGTGTCTGGATGATTTaGGGCTTGGGTCTCTTCATT	+
Preference number: 5 (lower is better) Translates to: HLHSKRFLPTRGIQSAVSRVWMI*GLGLFI Trigger: AATGAAGAGACCCAAGCCCAAAATCATCCAGACACG...TGAGACAGCGCTCTGAATCCCACGTGTGGGAAGGAATCTTTTACTGTGCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	CAGAAATCTCTCCCTGGGCCACCAGTCAACCTGTCCTTGCCAAAAACAGAACCTCGTGTCTGGATGATTTaGGGCTTGGGTCTCTTCATT	+
Preference number: 5 (lower is better) Translates to: QKSLPGPPVNLSLPKTEPRVWMI*GLGLFI Trigger: AATGAAGAGACCCAAGCCCAAAATCATCCAGACACG...AGGTTCTGTTTTTGGCAAGGACAGGTTGACTGGTGGCCCAGGGAGAGATTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	GATGACTGGGAAAGCAGAAATTCTCAAATGTTCACCGAGTGTCGTGGTCATCTGTCTCCTGGCCCCAGCTaGGAGATGGCATATAAAAGA	+
Preference number: 5 (lower is better) Translates to: DDWESRNSQMFTECRGHLSPGPS*EMAYKR Trigger: TCTTTTATATGCCATCTCCAAGCTGGGGCCAGGAGA...CAGATGACCACGACACTCGGTGAACATTTGAGAATTTCTGCTTTCCCAGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	AGAAAACGAGGACACGTGGTAAGAGTGTTCCAGAACTTTCCTGGCTTCCCAAGACGTGTCTGGATGATTTaGGGCTTGGGTCTCTTCATT	+
Preference number: 5 (lower is better) Translates to: RKRGHVVRVFQNFPGFPRRVWMI*GLGLFI Trigger: AATGAAGAGACCCAAGCCCAAAATCATCCAGACACG...TCTTGGGAAGCCAGGAAAGTTCTGGAACACTCTTACCACGTGTCCTCGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS-3UTR CAA 90 bp	CAAGTTTATCTTCACGTTTCAATGGGGGTGAAAAACTGTCTCAACCAACAGTTCTCTCCTGGCCCCAGCTaGGAGATGGCATATAAAAGA	+
Preference number: 5 (lower is better) Translates to: QVYLHVSMGVKNCLNQQFSPGPS*EMAYKR Trigger: TCTTTTATATGCCATCTCCAAGCTGGGGCCAGGAGA...GAACTGTTGGTTGAGACAGTTTTTCACCCCCATTGAAACGTGAAGATAAACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS GCA 72 bp	CGCGAAGGGCCGCAGAGTCACCCTACGGGGCGCCCGTaGCTCGACCGCCTCCGCCACCTCTCCGAGCCGCGG	+
Preference number: 6 (lower is better) Translates to: REGPQSHPTGRP*LDRLRHLSEPR Trigger: CCGCGGCTCGGAGAGGTGGCGGAGGCGGTCGAGGCACGGGCGCCCCGTAGGGTGACTCTGCGGCCCTTCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS CCA 72 bp	CCACGAACACGCGCGGGTCCAGGTGGCAGGCGATGGTaGCGCTCGGCAGGTCCTGCAGATCCACCTCCTCCA	+
Preference number: 6 (lower is better) Translates to: PRTRAGPGGRRW*RSAGPADPPPP Trigger: TGGAGGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGTGTTCGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS CCA 72 bp	CGTCCACGAACACGCGCGGGTCCAGGTGGCAGGCGATaGTGGCGCTCGGCAGGTCCTGCAGATCCACCTCCT	+
Preference number: 6 (lower is better) Translates to: RPRTRAGPGGRR*WRSAGPADPPP Trigger: AGGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGACCCGCGCGTGTTCGTGGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060005.15 ENSMUST00000232239.2
CDS GCA 72 bp	TCCAGGTGGCAGGCGATGGTGGCGCTCGGCAGGTCCTaGAGATCCACCTCCTCCATCTCGCAGTCGATGAAG	+
Preference number: 6 (lower is better) Translates to: SRWQAMVALGRS*RSTSSISQSMK Trigger: CTTCATCGACTGCGAGATGGAGGAGGTGGATCTGCAGGACCTGCCGAGCGCCACCATCGCCTGCCACCTGGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060005.15
CDS GCA 72 bp	TACAACTTCATTTCCTTCCCCAGGAACTCGGTCTTGTaGAGCCGCAGCCTGGCATCGGCTGCAGATAAGGGG	+
Preference number: 6 (lower is better) Translates to: YNFISFPRNSVL*SRSLASAADKG Trigger: CCCCTTATCTGCAGCCGATGCCAGGCTGCGGCTGCACAAGACCGAGTTCCTGGGGAAGGAAATGAAGTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2
CDS CCA 72 bp	TCTTCCTCCTCATTCTCTTGGTCACTCTCACACACGTaGACCACCACACTGGGAGTGGTGTCTGTCGCTGCA	+
Preference number: 6 (lower is better) Translates to: SSSSFSWSLSHT*TTTLGVVSVAA Trigger: TGCAGCGACAGACACCACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS CCA 72 bp	TCTCTTGGTCACTCTCACACACGTGGACCACCACACTaGGAGTGGTGTCTGTCGCTGCATGCAGTTCATACT	+
Preference number: 6 (lower is better) Translates to: SLGHSHTRGPPH*EWCLSLHAVHT Trigger: AGTATGAACTGCATGCAGCGACAGACACCACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGACCAAGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS CCA 72 bp	CTGAGGTGGATGGGTGTGTACTCCGGTCTCCGTGTCTaGATGATTTTGGGCTTGGGTCTCTTCATTCTCTCC	+
Preference number: 6 (lower is better) Translates to: LRWMGVYSGLRV*MILGLGLFILS Trigger: GGAGAGAATGAAGAGACCCAAGCCCAAAATCATCCAGACACGGAGACCGGAGTACACACCCATCCACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS CAA 90 bp	GGGTCTCTTCATTCTCTCCATCTCTTCCTCTTCCTCCTCATTCTCTaGGTCACTCTCACACACGTGGACCACCACACTGGGAGTGGTGTC	+
Preference number: 6 (lower is better) Translates to: GSLHSLHLFLFLLIL*VTLTHVDHHTGSGV Trigger: GACACCACTCCCAGTGTGGTGGTCCACGTGTGTGAGAGTGACCAAGAGAATGAGGAGGAAGAGGAAGAGATGGAGAGAATGAAGAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000231813.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS TCA 72 bp	CCAGCTTGGAGATGGCATATAAAAGATCGTAATTTATaGCGGGGGTGGCATCTTCTACTTGTTTCCAGCCAA	+
Preference number: 6 (lower is better) Translates to: PAWRWHIKDRNL*RGWHLLLVSSQ Trigger: TTGGCTGGAAACAAGTAGAAGATGCCACCCCCGTCATAAATTACGATCTTTTATATGCCATCTCCAAGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000231410.2 ENSMUST00000232197.2 ENSMUST00000232239.2
CDS CCA 72 bp	AAGTTTATCCGGACACGTTTGAAGCTCTTAAAATACTaGAAGGTGGTGTCCTTGTCATATGTTCTGAAGAGG	+
Preference number: 6 (lower is better) Translates to: KFIRTRLKLLKY*KVVSLSYVLKR Trigger: CCTCTTCAGAACATATGACAAGGACACCACCTTCCAGTATTTTAAGAGCTTCAAACGTGTCCGGATAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023672.10 ENSMUST00000060005.15 ENSMUST00000232239.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu