Pregenerated sensors for RBPMS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031586Ensembl transcript IDs: ENSMUST00000033994.15, ENSMUST00000033995.14, ENSMUST00000053251.12, ENSMUST00000182256.8, ENSMUST00000182926.8, ENSMUST00000182987.8, ENSMUST00000183062.2, ENSMUST00000183088.2, ENSMUST00000183336.8, ENSMUST00000191473.7
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCCTaGACACCAGCTTGGATGTCTAAGTTCCCAGTGCTGCCTGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: VSQSSGTGAGAMSSP*TPAWMSKFPVLPAP Trigger: GGGGGCAGGCAGCACTGGGAACTTAGACATCCAAGCTGGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR GCA 90 bp | ACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATTaGAGCCGCCATCACACACCCGAGACACAGCCTCAGCAGAACTGC | + |
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Preference number: 1 (lower is better) Translates to: TVATSEDRINTHKTD*SRHHTPETQPQQNC Trigger: GCAGTTCTGCTGAGGCTGTGTCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
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| 3UTR CCA 90 bp | GGCAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTaGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: GRVFSSQQAPVLQNS*MTVATSEDRINTHK Trigger: CTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
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| 3UTR TCA 90 bp | GGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATaGCAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: GCFQASKLQFCRTAG*QSPPVKTALIPTRQ Trigger: CTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
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| 3UTR TCA 90 bp | TACTGCAGAAGCTCATTTCTACACCGCGTTACTAATAACAGGGCCTaGCACTGGGCCAGGCAGAGGGAGTCCACACATTTACAACACAAT | + |
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Preference number: 1 (lower is better) Translates to: YCRSSFLHRVTNNRA*HWARQRESTHLQHN Trigger: ATTGTGTTGTAAATGTGTGGACTCCCTCTGCCTGGCCCAGTGTCAGGCCCTGTTATTAGTAACGCGGTGTAGAAATGAGCTTCTGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCGAGCAGGAGAGGCTGTaGTGTCACAGCCTCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ASRSLTVKWHGGWGHEQSEQERL*CHSLWK Trigger: TTTCCAGAGGCTGTGACAGCACAGCCTCTCCTGCTC...GGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCTGGGCCTTGAAGTCTTaGAGCAAGGGTATTCATTGC | + |
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Preference number: 2 (lower is better) Translates to: ASRSLTVKWHGGWGHEQSWALKS*SKGIHC Trigger: GCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCA...GGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR TCA 90 bp | ACTATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCACTAATAACAGGGCCTaGCACTGGGCCAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TMSLGTVGIVSAGVAMGFTNNRA*HWARQR Trigger: CCTCTGCCTGGCCCAGTGTCAGGCCCTGTTATTAGT...GAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCCTGAACACCTCCTCTAGTTTACAGTaGAAAGGCCCATATTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SLTVKWHGGWGHEQSLNTSSSLQ*KGPYSR Trigger: CCTGGAATATGGGCCTTTTCACTGTAAACTAGAGGA...GGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCACCCACAAGACAGATTaGAGCCGCCATCACACACCC | + |
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Preference number: 2 (lower is better) Translates to: QAPVLQNSWMTVATSEDRTHKTD*SRHHTP Trigger: GGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGT...GCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAACCCACAAGACAGATTaGAGCCGCCATCACACACCC | + |
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Preference number: 2 (lower is better) Translates to: SQQAPVLQNSWMTVATSETHKTD*SRHHTP Trigger: GGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGT...TTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | GCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCGTGAATATACTACAATaGCAAATGCTCTTGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASRSLTVKWHGGWGHEQSVNILQ*QMLLGA Trigger: TGCCCCCAAGAGCATTTGCCATTGTAGTATATTCAC...GGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGGATCCAGCGCATCCTTaGTCATGGCTGTTCGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QNSWMTVATSEDRINTHKDPAHP*SWLFVS Trigger: TGAGACGAACAGCCATGACCAAGGATGCGCTGGATC...CTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGAGAGTCTTTGCCCAGTGGTaGATATACTACAATGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VPGHSWYSLSWSGHGFQRVFAQW*IYYNGK Trigger: TTTGCCATTGTAGTATATTCACCACTGGGCAAAGAC...TCTCTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCAGCTGGAGTGGCCATGGGTTTCAGAGACATTACCTAAGTAGTCTTTGCTTGCAGAGAGATCCCTaGGAGCCAGGATTACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SLSWSGHGFQRHYLSSLCLQRDP*EPGLQS Trigger: GCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAA...GCAAAGACTACTTAGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTGCAGAGAGATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGTTTTGCAGAACAGCTaGATGACAGTCGCCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSCREIPGSQDYRASTAEVLQNS*MTVATS Trigger: ACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAAC...TTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191473.7 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGACTAATAACAGGGCCTaGCACTGGGCCAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LWKCVAHNTRLTLGLEVLTNNRA*HWARQR Trigger: CCTCTGCCTGGCCCAGTGTCAGGCCCTGTTATTAGT...CAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGCAGGGCCTGCTCCTCTTGAGGCAATGGTTACCTCCAAACTAAGGTCCCTCTCTTGGCTTTACTGTTaGTGTCTTTGTTCTATGTCT | + |
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Preference number: 2 (lower is better) Translates to: WAGPAPLEAMVTSKLRSLSWLYC*CLCSMS Trigger: AGACATAGAACAAAGACAGCAACAGTAAAGCCAAGA...GAGGGACCTTAGTTTGGAGGTAACCATTGCCTCAAGAGGAGCAGGCCCTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCATAATTGATGATAAAGCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGAGATGTGATGTCCACTaGAGGCTGAGTGGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: KSIIDDKASRSLTVKWHGRCDVH*RLSGQG Trigger: GCCCTGCCCACTCAGCCTGCAGTGGACATCACATCT...CCCGTGCCACTTGACTGTGAGACTCCTACTTGCTTTATCATCAATTATGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCCCTTAAATATAAGGTTCCACTGGGGAAATGGAGACAGTTTATGGAAGACCCACAAGACAGATTaGAGCCGCCATCACACACCC | + |
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Preference number: 2 (lower is better) Translates to: SLPLNIRFHWGNGDSLWKTHKTD*SRHHTP Trigger: GGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGT...CTTCCATAAACTGTCTCCATTTCCCCAGTGGAACCTTATATTTAAGGGGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | TATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGGTGAATATACTACAATaGCAAATGCTCTTGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YVPGHSWYSLSWSGHGFQVNILQ*QMLLGA Trigger: TGCCCCCAAGAGCATTTGCCATTGTAGTATATTCAC...CTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR TCA 90 bp | CAGATCAAAAACAAAGATACAAAGATTGTGATTATGTCTAGTAACAGCAGCTGGATGTCCACTGCAGGCTaGGTGGGCAGGGCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QIKNKDTKIVIMSSNSSWMSTAG*VGRACS Trigger: GGAGCAGGCCCTGCCCACTCAGCCTGCAGTGGACAT...CCAGCTGCTGTTACTAGACATAATCACAATCTTTGTATCTTTGTTTTTGATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR CAA 90 bp | ACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATaGCAGAGGGCCACTGTTTCATTCCCTGCCCTGTGCAATGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: TRLTLGLEVLKQGYS*QRATVSFPALCNVV Trigger: TACTACATTGCACAGGGCAGGGAATGAAACAGTGGCCCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR CAA 90 bp | TGTCACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTaGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATTGCAGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: CHSLWKCVAHNTRLT*GLEVLKQGYSLQRA Trigger: GGCCCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | CTAATAACAGGGCCTGACACTGGGCCAGGCAGAGGGAGTCCACACATTTACAACTCTTGGCTTTACTGTTaGTGTCTTTGTTCTATGTCT | + |
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Preference number: 2 (lower is better) Translates to: LITGPDTGPGRGSPHIYNSWLYC*CLCSMS Trigger: AGACATAGAACAAAGACAGCAACAGTAAAGCCAAGA...GTTGTAAATGTGTGGACTCCCTCTGCCTGGCCCAGTGTCAGGCCCTGTTATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCCCCTTAAATATAAGGTTCCACTGGGGAAATGGAGACAGTTTATGGAAGTGGTATAGTCTCAGCTaGAGTGGCCATGGGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SLPLNIRFHWGNGDSLWKWYSLS*SGHGFQ Trigger: CTGAAACCCATGGCCACTCCAGCTGAGACTATACCA...CTTCCATAAACTGTCTCCATTTCCCCAGTGGAACCTTATATTTAAGGGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGTTGCAGAGAGATCCCTaGGAGCCAGGATTACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: WKCVAHNTRLTLGLEVLKLQRDP*EPGLQS Trigger: GCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAA...CTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGCAGCTGGAGTGGCCATaGGTTTCAGAGACATTACCT | + |
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Preference number: 2 (lower is better) Translates to: WKCVAHNTRLTLGLEVLKQLEWP*VSETLP Trigger: AGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTG...CTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR CAA 90 bp | CTGACACTGGGCCAGGCAGAGGGAGTCCACACATTTACAACACAATaGTGGAAAATTTTGATGCTAGAGATATGCTTCAAACATGCATCT | + |
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Preference number: 2 (lower is better) Translates to: LTLGQAEGVHTFTTQ*WKILMLEICFKHAS Trigger: AGATGCATGTTTGAAGCATATCTCTAGCATCAAAATTTTCCACAATTGTGTTGTAAATGTGTGGACTCCCTCTGCCTGGCCCAGTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR CAA 90 bp | AAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTaGAAGCAAGGGTATTCATTGCAGAGGGCCACTGTTTCATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KCVAHNTRLTLGLEV*KQGYSLQRATVSFP Trigger: AGGGAATGAAACAGTGGCCCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCAGGTTTTGCAGAACAGCTaGATGACAGTCGCCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: GFTVAVFVLCLQTVQKCQVLQNS*MTVATS Trigger: ACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAAC...CTGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
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| 3UTR-3UTR TCA 90 bp | CAGATCAAAAACAAAGATACAAAGATTGTGATTATGTCTAGTAACAGCAGCTGGCACGTCCAGAGAACATaGTGGGCGGTCTATCTGACA | + |
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Preference number: 2 (lower is better) Translates to: QIKNKDTKIVIMSSNSSWHVQRT*WAVYLT Trigger: TGTCAGATAGACCGCCCATCATGTTCTCTGGACGTG...CCAGCTGCTGTTACTAGACATAATCACAATCTTTGTATCTTTGTTTTTGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGGTGAATATACTACAATaGCAAATGCTCTTGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LWKCVAHNTRLTLGLEVLVNILQ*QMLLGA Trigger: TGCCCCCAAGAGCATTTGCCATTGTAGTATATTCAC...CAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | CAGATCAAAAACAAAGATACAAAGATTGTGATTATGTCTAGTAACAGCAGCTGGTCATTCCCTGCCCTGTaGAATGTAGTAGGTAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QIKNKDTKIVIMSSNSSWSFPAL*NVVGSL Trigger: GAGACTACCTACTACATTGCACAGGGCAGGGAATGA...CCAGCTGCTGTTACTAGACATAATCACAATCTTTGTATCTTTGTTTTTGATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAAATGGAGACAGTTTATaGAAGGTGGGTGATATATAT | + |
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Preference number: 2 (lower is better) Translates to: HSLWKCVAHNTRLTLGLENGDSL*KVGDIY Trigger: ATATATATCACCCACCTTCCATAAACTGTCTCCATT...TTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCTTGGCTTTACTGTTaGTGTCTTTGTTCTATGTCT | + |
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Preference number: 2 (lower is better) Translates to: SWLYCCCLCSMSSNCTEMSWLYC*CLCSMS Trigger: AGACATAGAACAAAGACAGCAACAGTAAAGCCAAGA...CATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
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| 3UTR TCA 72 bp | TCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCCTaGACACCAGCTTGGATGTCTAAGTTCCCAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SSGTGAGAMSSP*TPAWMSKFPVL Trigger: CAGCACTGGGAACTTAGACATCCAAGCTGGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR CCA 72 bp | GCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTaGGGCCATGAGCAGTCCCTGAACACCAGCTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: ASRSLTVKWHGG*GHEQSLNTSLD Trigger: ATCCAAGCTGGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCCTGAACACCCAATGGCAAATGCTCTaGGGGGCACTGATTGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: SLTVKWHGGWGHEQSLNTQWQML*GALIVL Trigger: CAAGACAATCAGTGCCCCCAAGAGCATTTGCCATTG...GGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR TCA 72 bp | GAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATaGGCAGTCCCTGAACACCAGCTTGGATGTCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: ESHSQVARGLGP*AVPEHQLGCLS Trigger: ACTTAGACATCCAAGCTGGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCGGATCCAGCGCATCCTaGGTCATGGCTGTTCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QAPVLQNSWMTVATSEDRGSSAS*VMAVRL Trigger: GAGACGAACAGCCATGACCAAGGATGCGCTGGATCC...GCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAATACCCACAAGACAGATaGCAGCCGCCATCACACACC | + |
|
Preference number: 3 (lower is better) Translates to: SQQAPVLQNSWMTVATSEYPQDR*QPPSHT Trigger: GGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTA...TTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
||
| 3UTR GCA 72 bp | ACCAGTGAAGACCGCATTAATACCCACAAGACAGATTaGAGCCGCCATCACACACCCGAGACACAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSEDRINTHKTD*SRHHTPETQPQ Trigger: CTGAGGCTGTGTCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
||
| 3UTR CCA 72 bp | ATTGATGATAAAGCAAGTAGGAGTCTCACAGTCAAGTaGCACGGGGGCTGGGGCCATGAGCAGTCCCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: IDDKASRSLTVK*HGGWGHEQSLN Trigger: GTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGCTTTATCATCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR TCA 72 bp | CAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATaGCAGTCGCCACCAGTGAAGACCGCATTAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: QASKLQFCRTAG*QSPPVKTALIP Trigger: GGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCTTACTGTTGCTGTCTTaGTTCTATGTCTTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ASRSLTVKWHGGWGHEQSLLLLS*FYVFKL Trigger: CAGTTTGAAGACATAGAACAAAGACAGCAACAGTAA...GGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGTGCTGTCACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTGGGGCACTGATTGTCTaGCAGAGAGATCCCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLCCHSLWKCVAHNTRLTGALIV*QRDPWE Trigger: CTCCCAGGGATCTCTCTGCAAGACAATCAGTGCCCC...AGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTGACAGCACAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR TCA 72 bp | AGCTCATTTCTACACCGCGTTACTAATAACAGGGCCTaGCACTGGGCCAGGCAGAGGGAGTCCACACATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSFLHRVTNNRA*HWARQRESTHL Trigger: TAAATGTGTGGACTCCCTCTGCCTGGCCCAGTGTCAGGCCCTGTTATTAGTAACGCGGTGTAGAAATGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR GCA 72 bp | TCATTGCAGAGGGCCACTGTTTCATTCCCTGCCCTGTaGAATGTAGTAGGTAGTCTCAAGATGAGCACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLQRATVSFPAL*NVVGSLKMSTS Trigger: GGACGTGCTCATCTTGAGACTACCTACTACATTGCACAGGGCAGGGAATGAAACAGTGGCCCTCTGCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CCA 72 bp | CACTATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTaGAGTGGCCATGGGTTTCAGAGACATTACCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HYVPGHSWYSLS*SGHGFQRHYLS Trigger: ACTTAGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CCA 72 bp | CTAAGTATAGAATGTCACTATGTCCCTGGGCACAGTTaGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSIECHYVPGHS*YSLSWSGHGFQ Trigger: CTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATAGTGACATTCTATACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CCA 72 bp | TTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTaGATGACAGTCGCCACCAGTGAAGACCGCATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSQQAPVLQNS*MTVATSEDRIN Trigger: ATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCAGAGAGATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGCTATCTTGGCTTTACTGTaGCTGTCTTTGTTCTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SCREIPGSQDYRASTAEAILALL*LSLFYV Trigger: GACATAGAACAAAGACAGCAACAGTAAAGCCAAGAT...AGCTTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTCAATGGCAAATGCTCTaGGGGGCACTGATTGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CHSLWKCVAHNTRLTLGLQWQML*GALIVL Trigger: CAAGACAATCAGTGCCCCCAAGAGCATTTGCCATTG...AAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | CGATCTTGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAATACCCACAAGACAGATaGCAGCCGCCATCACACACC | + |
|
Preference number: 3 (lower is better) Translates to: RSWLYCCCLCSMSSNCTEYPQDR*QPPSHT Trigger: GGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTA...TTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCAAGATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| 3UTR CCA 72 bp | GGTTCCACTGGGGAAATGGAGACAGTTTATGGAAGGTaGGTGATATATATTAGGTTACACACTCTGAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSTGEMETVYGR*VIYIRLHTLRV Trigger: CACCCTCAGAGTGTGTAACCTAATATATATCACCCACCTTCCATAAACTGTCTCCATTTCCCCAGTGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCAGCTGGAGTGGCCATGGGTTTCAGAGACATTACCTAAGTAGTCTTTGCATCTTGGCTTTACTGTaGCTGTCTTTGTTCTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSWSGHGFQRHYLSSLCILALL*LSLFYV Trigger: GACATAGAACAAAGACAGCAACAGTAAAGCCAAGAT...GCAAAGACTACTTAGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTGAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CCA 72 bp | AAACTAAGGTCCCTCCCCTTAAATATAAGGTTCCACTaGGGAAATGGAGACAGTTTATGGAAGGTGGGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: KLRSLPLNIRFH*GNGDSLWKVGD Trigger: ATCACCCACCTTCCATAAACTGTCTCCATTTCCCCAGTGGAACCTTATATTTAAGGGGAGGGACCTTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGTTACTGTTGCTGTCTTaGTTCTATGTCTTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LWKCVAHNTRLTLGLEVLLLLLS*FYVFKL Trigger: CAGTTTGAAGACATAGAACAAAGACAGCAACAGTAA...CAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGCAAGGGTATTTACTGTTGCTGTCTTaGTTCTATGTCTTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VAHNTRLTLGLEVLKQGYLLLLS*FYVFKL Trigger: CAGTTTGAAGACATAGAACAAAGACAGCAACAGTAA...ATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | CTCGGAGGGAGGGATCCAGCGCATCCTTGGTCATGGCTGTTCGTCTCAGTCCGTCCCTCAGGCCAGGGATaGTGGGAACCTGGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGRDPAHPWSWLFVSVRPSGQG*WEPGHA Trigger: TGCATGCCCAGGTTCCCAGCATCCCTGGCCTGAGGG...ACGGACTGAGACGAACAGCCATGACCAAGGATGCGCTGGATCCCTCCCTCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182926.8 ENSMUST00000183336.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCCTCGGAGGGAGGGATCCAGCGCATCCTTGGTCATGGCTGTTCGTCTCAGGGATGCTGGGAACCTaGGCATGCAGTGAAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGGRDPAHPWSWLFVSGMLGT*ACSEAG Trigger: CCCCGCTTCACTGCATGCCCAGGTTCCCAGCATCCC...TGAGACGAACAGCCATGACCAAGGATGCGCTGGATCCCTCCCTCCGAGGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182926.8 ENSMUST00000183336.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCCTCGGAGGGAGGGATCCAGCGCATCCTTGGTCATGGCTGTTCGTCTCTCAGGCCAGGGATGCTaGGAACCTGGGCATGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWPRREGSSASLVMAVRLSGQGC*EPGHAV Trigger: CACTGCATGCCCAGGTTCCCAGCATCCCTGGCCTGA...GAGACGAACAGCCATGACCAAGGATGCGCTGGATCCCTCCCTCCGAGGCCACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182926.8 ENSMUST00000183336.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCCTCGGAGGGAGGGATCCAGCGCATCCTTGGTCATGGCTGTTCGTCTCAACCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWPRREGSSASLVMAVRLNLGMQ*SGVGES Trigger: GCTTTCACCTACCCCGCTTCACTGCATGCCCAGGTT...GAGACGAACAGCCATGACCAAGGATGCGCTGGATCCCTCCCTCCGAGGCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182926.8 ENSMUST00000183336.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCCTGAACACCTGGGCAGAGGAGTACTaGGGTTTGGAGTCCCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTVKWHGGWGHEQSLNTWAEEY*GLESLR Trigger: TCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCA...GGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | AAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGACGGACCTCCTCCTCCTaGAGGTTGGCCTCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTALIPTRQIAAAITHPRRTSSS*RLASLG Trigger: CCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCG...TCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGGGCCTGCTCCTCTTGAGGCAATGGTTACCTCCAAACTAAGGTCCCTCCCTCCTCCTGAAGGTTaGCCTCGCTCGGGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGPAPLEAMVTSKLRSLPPPEG*PRSGCS Trigger: AGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGG...GAGGGACCTTAGTTTGGAGGTAACCATTGCCTCAAGAGGAGCAGGCCCTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGACACAGCGGGACTTCCAGCCCTaGGAAGTGGCCTCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RINTHKTDCSRHHTPETQRDFQP*EVASEG Trigger: TCCCTCCGAGGCCACTTCCCAGGGCTGGAAGTCCCG...CTGTGTCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | GTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCGGGACTTCCAGCCCTaGGAAGTGGCCTCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VATSEDRINTHKTDCSRHRDFQP*EVASEG Trigger: TCCCTCCGAGGCCACTTCCCAGGGCTGGAAGTCCCG...ATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCGGGATGCTGGGAACCTaGGCATGCAGTGAAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAPVLQNSWMTVATSEDRGMLGT*ACSEAG Trigger: CCCCGCTTCACTGCATGCCCAGGTTCCCAGCATCCC...GCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGCTCTTGGGGGCACTGATTGTCTTGCAGAGAGATCCCTGGGAGCCAGGACCAGAGGCAGACCGCTaGCAAATAGGGTCCGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QMLLGALIVLQRDPWEPGPEADR*QIGSGP Trigger: AGGTCCGGACCCTATTTGTCAGCGGTCTGCCTCTGG...TCCTGGCTCCCAGGGATCTCTCTGCAAGACAATCAGTGCCCCCAAGAGCATTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | TCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTCCCTCAGGCCAGGGATaGTGGGAACCTGGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQQAPVLQNSWMTVATSPSGQG*WEPGHA Trigger: TGCATGCCCAGGTTCCCAGCATCCCTGGCCTGAGGG...ACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCCTGAACACCGTTTTGCAGAACAGCTaGATGACAGTCGCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLTVKWHGGWGHEQSLNTVLQNS*MTVATS Trigger: ACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAAC...GGTGTTCAGGGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033994.15 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCCATCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAPVLQNSWMTVATSEDRHLGMQ*SGVGES Trigger: GCTTTCACCTACCCCGCTTCACTGCATGCCCAGATG...GCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | TATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGCCTCCTCCTGAAGGTTaGCCTCGCTCGGGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVPGHSWYSLSWSGHGFQPPPEG*PRSGCS Trigger: AGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGG...CTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACTCAGGCCAGGGATGCTaGGAACCTGGGCATGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQAPVLQNSWMTVATSEDSGQGC*EPGHAV Trigger: CACTGCATGCCCAGGTTCCCAGCATCCCTGGCCTGA...GTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCTGCGGCCTCTGCTTCTaGGCGACTGTCAAAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAPVLQNSWMTVATSEDRCGLCF*ATVKTD Trigger: GTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCCGCA...GCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGGCCTGCTCCTCTTGAGGCAATGGTTACCTCCAAACTAAGGTCCCTCTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAGPAPLEAMVTSKLRSLSLAMN*GTVLGR Trigger: TCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGA...GAGGGACCTTAGTTTGGAGGTAACCATTGCCTCAAGAGGAGCAGGCCCTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | GAAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGCATCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDRINTHKTDCSRHHTPEHLGMQ*SGVGES Trigger: GCTTTCACCTACCCCGCTTCACTGCATGCCCAGATG...CTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACACCTCCTCCTGAAGGTTaGCCTCGCTCGGGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVFSSQQAPVLQNSWMTPPPEG*PRSGCS Trigger: AGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGG...TGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| 3UTR CAA 72 bp | CGGGGCAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTaGCAGAACAGCTGGATGACAGTCGCCACCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGRVFSSQQAPV*QNSWMTVATSE Trigger: TTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183336.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATTGCAGAGGCGGACCTCCTCCTCCTaGAGGTTGGCCTCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLTLGLEVLKQGYSLQRRTSSS*RLASLG Trigger: CCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCG...CCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCCGGACCTCCTCCTCCTaGAGGTTGGCCTCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWKCVAHNTRLTLGLEVRTSSS*RLASLG Trigger: CCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCG...GACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGGCCTGCTCCTCTTGAGGCAATGGTTACCTCCAAACTAAGGTCCCTCAGCGACTGTCAAAACTaGCAAAGCCTACGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WAGPAPLEAMVTSKLRSLSDCQN*QSLRAV Trigger: AACAGCCCGTAGGCTTTGTCAGTTTTGACAGTCGCT...GAGGGACCTTAGTTTGGAGGTAACCATTGCCTCAAGAGGAGCAGGCCCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | AAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGAAACCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTALIPTRQIAAAITHPRNLGMQ*SGVGES Trigger: GCTTTCACCTACCCCGCTTCACTGCATGCCCAGGTT...TCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183336.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGACACTGGGCAGAGGAGTACTaGGGTTTGGAGTCCCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: TALIPTRQIAAAITHPRHWAEEY*GLESLR Trigger: TCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCA...GTGTCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGACACAGTGGGCAGAGGAGTACTaGGGTTTGGAGTCCCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: RINTHKTDCSRHHTPETQWAEEY*GLESLR Trigger: TCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCA...CTGTGTCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | GATGATAAAGCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATACTGAGGTACAGTGTTaGGCAGAGGAGTACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DDKASRSLTVKWHGGWGHTEVQC*AEEYWG Trigger: ACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGT...ATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGCTTTATCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR TCA 90 bp | GTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VATSEDRINTHKTDCSRHSLAMN*GTVLGR Trigger: TCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGA...ATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | TATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGATGGCTCCCTGGCAATaGACTGAGGTACAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVPGHSWYSLSWSGHGFQMAPWQ*TEVQCW Trigger: CCAACACTGTACCTCAGTTCATTGCCAGGGAGCCAT...CTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR TCA 90 bp | GTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATATGGCTCCCTGGCAATaGACTGAGGTACAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VATSEDRINTHKTDCSRHMAPWQ*TEVQCW Trigger: CCAACACTGTACCTCAGTTCATTGCCAGGGAGCCAT...ATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGCTCATTTCTACACCGCGTTGGGCAGAGGAGTACTaGGGTTTGGAGTCCCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: LGARITELVLQKLISTPRWAEEY*GLESLR Trigger: TCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCA...ACGCGGTGTAGAAATGAGCTTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | TCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTACTGAGGTACAGTGTTaGGCAGAGGAGTACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQQAPVLQNSWMTVATSTEVQC*AEEYWG Trigger: ACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGT...ACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | TGTCACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTCGGGACTTCCAGCCCTaGGAAGTGGCCTCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHSLWKCVAHNTRLTLGLRDFQP*EVASEG Trigger: TCCCTCCGAGGCCACTTCCCAGGGCTGGAAGTCCCG...AAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CAA 72 bp | CTACAATGGCAAATGCTCTTGGGGGCACTGATTGTCTaGCAGAGAGATCCCTGGGAGCCAGGATTACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQWQMLLGALIV*QRDPWEPGLQS Trigger: GCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAAGACAATCAGTGCCCCCAAGAGCATTTGCCATTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | GAAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGAGCGACTGTCAAAACTaGCAAAGCCTACGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EDRINTHKTDCSRHHTPESDCQN*QSLRAV Trigger: AACAGCCCGTAGGCTTTGTCAGTTTTGACAGTCGCT...CTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFKPASSSFAEQLDDSRHSLAMN*GTVLGR Trigger: TCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGA...GTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | GGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCATGGCTCCCTGGCAATaGACTGAGGTACAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVFKPASSSFAEQLDDSRMAPWQ*TEVQCW Trigger: CCAACACTGTACCTCAGTTCATTGCCAGGGAGCCAT...GCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
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| CDS-3UTR GCA 90 bp | GATGATAAAGCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGCTACTGGGGTAAAGTaGAGGTACTGTGAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DDKASRSLTVKWHGGWGHATGVK*RYCELI Trigger: TATGAGCTCACAGTACCTGCACTTTACCCCAGTAGC...ATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGCTTTATCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | TATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGAGACATTACCTAAGTAGTCTTCAGCCTCAGCAGAACTaGCGGGACTTCCAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSLSWSGHGFQRHYLSSLQPQQN*RDFQPW Trigger: CCAGGGCTGGAAGTCCCGGCAGTTCTGCTGAGGCTG...AAGACTACTTAGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTGAGACTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033994.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCAGGAGTACTGGGGTTTaGAGTCCCTACGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAPVLQNSWMTVATSEDRRSTGV*SPYEFV Trigger: AACAAACTCGTAGGGACTCCAAACCCCAGTACTCCT...GCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACTGAGGTACAGTGTTaGGCAGAGGAGTACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSWMTVATSEDRINTHKTEVQC*AEEYWG Trigger: ACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGT...CTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | AGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWMTVATSEDRINTHKTDSLAMN*GTVLGR Trigger: TCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGA...ATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | ACTATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCTCTAGTCGTAGCGTTTaGGGGATTTCAGGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TMSLGTVGIVSAGVAMGFSSRSV*GISGSK Trigger: CTTCGATCCTGAAATCCCGCAAACGCTACGACTAGA...GAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAACTGAGGTACAGTGTTaGGCAGAGGAGTACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSWMTVATSEDRINTHKTTEVQC*AEEYWG Trigger: ACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGT...TGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| 3UTR CAA 72 bp | ACTTTGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATaGCAGAGGGCCACTGTTTCATTCCCTGCCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGLEVLKQGYS*QRATVSFPALC Trigger: GCACAGGGCAGGGAATGAAACAGTGGCCCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR TCA 90 bp | TTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCAGACCACGGACCTCCTCCTCCTaGAGGTTGGCCTCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLSLFYVFKLYRNVRPRTSSS*RLASLG Trigger: CCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCG...TGGTCTGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
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| CDS-3UTR TCA 90 bp | CAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTAGCGACTGTCAAAACTaGCAAAGCCTACGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGVFKPASSSFAEQLDDSSDCQN*QSLRAV Trigger: AACAGCCCGTAGGCTTTGTCAGTTTTGACAGTCGCT...ACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
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| CDS-3UTR TCA 90 bp | AGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCCATCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWKCVAHNTRLTLGLEVHLGMQ*SGVGES Trigger: GCTTTCACCTACCCCGCTTCACTGCATGCCCAGATG...GACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR CCA 90 bp | CTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGCTCATTTCTACACCGCGTAGGAGTACTGGGGTTTaGAGTCCCTACGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGARITELVLQKLISTPRRSTGV*SPYEFV Trigger: AACAAACTCGTAGGGACTCCAAACCCCAGTACTCCT...ACGCGGTGTAGAAATGAGCTTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR CCA 90 bp | AATGGTTACCTCCAAACTAAGGTCCCTCCCCTTAAATATAAGGTTCCACTGGGGTGGGCAGAGGAGTACTaGGGTTTGGAGTCCCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: NGYLQTKVPPLKYKVPLGWAEEY*GLESLR Trigger: TCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCA...CCCCAGTGGAACCTTATATTTAAGGGGAGGGACCTTAGTTTGGAGGTAACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR CCA 90 bp | TCTTGCAGAGAGATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGCTTACTGTGAGCTCATATaGCTCCCTGGCAATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCREIPGSQDYRASTAEAYCELI*LPGNEL Trigger: CAGTTCATTGCCAGGGAGCCATATGAGCTCACAGTA...AGCTTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053251.12 ENSMUST00000191473.7 |
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| CDS-3UTR CCA 90 bp | GGCAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACATACTGTGAGCTCATATaGCTCCCTGGCAATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVFSSQQAPVLQNSWMTYCELI*LPGNEL Trigger: CAGTTCATTGCCAGGGAGCCATATGAGCTCACAGTA...TGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
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| CDS-3UTR CCA 90 bp | GGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCAGCGGGACTTCCAGCCCTaGGAAGTGGCCTCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFTVAVFVLCLQTVQKCQRDFQP*EVASEG Trigger: TCCCTCCGAGGCCACTTCCCAGGGCTGGAAGTCCCG...CTGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTGCGGCCTCTGCTTCTaGGCGACTGTCAAAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLWKCVAHNTRLTLGLEVCGLCF*ATVKTD Trigger: GTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCCGCA...GACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTGTGCTGTCACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTATGGCTCCCTGGCAATaGACTGAGGTACAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLCCHSLWKCVAHNTRLTMAPWQ*TEVQCW Trigger: CCAACACTGTACCTCAGTTCATTGCCAGGGAGCCAT...AGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTGACAGCACAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | AGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCTCTAGTCGTAGCGTTTaGGGGATTTCAGGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVFSSQQAPVLQNSWMTVSSRSV*GISGSK Trigger: CTTCGATCCTGAAATCCCGCAAACGCTACGACTAGA...GACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | AGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATTCTAGTCGTAGCGTTTaGGGGATTTCAGGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWMTVATSEDRINTHKTDSSRSV*GISGSK Trigger: CTTCGATCCTGAAATCCCGCAAACGCTACGACTAGA...ATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCACCCACAAGACAGATTaGAGCCGCCATCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLWKCVAHNTRLTLGLEVTHKTD*SRHHTP Trigger: GGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGT...GACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033994.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTGCTGTCACAGCCTCTGGAAATGTGTTGCACATAACACAAGACTAACTACTGAGGTACAGTGTTaGGCAGAGGAGTACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLCCHSLWKCVAHNTRLTTEVQC*AEEYWG Trigger: ACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGT...AGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAGGCTGTGACAGCACAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | ACCAGTGAAGACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACATACTGTGAGCTCATATaGCTCCCTGGCAATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSEDRINTHKTDCSRHHTYCELI*LPGNEL Trigger: CAGTTCATTGCCAGGGAGCCATATGAGCTCACAGTA...TGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTTACTGTGAGCTCATATaGCTCCCTGGCAATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QGVFKPASSSFAEQLDDSYCELI*LPGNEL Trigger: CAGTTCATTGCCAGGGAGCCATATGAGCTCACAGTA...ACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTAAACTTCAGGGCTACTaGGGTAAAGTGCAGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QGVFKPASSSFAEQLDDSKLQGY*GKVQVL Trigger: CAGTACCTGCACTTTACCCCAGTAGCCCTGAAGTTT...ACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAACACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATAAACTTCAGGGCTACTaGGGTAAAGTGCAGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLQNSWMTVATSEDRINKLQGY*GKVQVL Trigger: CAGTACCTGCACTTTACCCCAGTAGCCCTGAAGTTT...ATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTGCAGAGAGATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAAAACTTCAGGGCTACTaGGGTAAAGTGCAGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSCREIPGSQDYRASTAEKLQGY*GKVQVL Trigger: CAGTACCTGCACTTTACCCCAGTAGCCCTGAAGTTT...TTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAAGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGCTCATTTCTACACCCTACGAGTTTGTTCTTaGCCATCTTCGTGTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGSQDYRASTAEAHFYTLRVCS*PSSCLP Trigger: AGGCAAACACGAAGATGGCCAAGAACAAACTCGTAG...GGTGTAGAAATGAGCTTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGGGGATCCAGCGCATATaGCTCCCTGGCAATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LWKCVAHNTRLTLGLEVLGIQRI*LPGNEL Trigger: CAGTTCATTGCCAGGGAGCCATATGCGCTGGATCCC...CAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033994.15 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATTGCAGAGGAGCGACTGTCAAAACTaGCAAAGCCTACGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLTLGLEVLKQGYSLQRSDCQN*QSLRAV Trigger: AACAGCCCGTAGGCTTTGTCAGTTTTGACAGTCGCT...CCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | CTCTGGAAATGTGTTGCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTTGTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWKCVAHNTRLTLGLEVLSLAMN*GTVLGR Trigger: TCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGA...CAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR GCA 90 bp | AATGGTTACCTCCAAACTAAGGTCCCTCCCCTTAAATATAAGGTTCCACTGGGGTCTAGTCGTAGCGTTTaGGGGATTTCAGGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGYLQTKVPPLKYKVPLGSSRSV*GISGSK Trigger: CTTCGATCCTGAAATCCCGCAAACGCTACGACTAGA...CCCCAGTGGAACCTTATATTTAAGGGGAGGGACCTTAGTTTGGAGGTAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | AGTCTCAGCTGGAGTGGCCATGGGTTTCAGAGACATTACCTAAGTAGTCTTTGCCTACGAGTTTGTTCTTaGCCATCTTCGTGTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSWSGHGFQRHYLSSLCLRVCS*PSSCLP Trigger: AGGCAAACACGAAGATGGCCAAGAACAAACTCGTAG...GCAAAGACTACTTAGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGAGGCAATGGTTACCTCCAAACTAAGGTCCCTCCCCTTAAATATAAGGAGGAGTACTGGGGTTTaGAGTCCCTACGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLEAMVTSKLRSLPLNIRRSTGV*SPYEFV Trigger: AACAAACTCGTAGGGACTCCAAACCCCAGTACTCCT...CCTTATATTTAAGGGGAGGGACCTTAGTTTGGAGGTAACCATTGCCTCAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGAGGCAATGGTTACCTCCAAACTAAGGTCCCTCCCCTTAAATATAAGGAAACTTCAGGGCTACTaGGGTAAAGTGCAGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLEAMVTSKLRSLPLNIRKLQGY*GKVQVL Trigger: CAGTACCTGCACTTTACCCCAGTAGCCCTGAAGTTT...CCTTATATTTAAGGGGAGGGACCTTAGTTTGGAGGTAACCATTGCCTCAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | GGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCAGTGCGGCCTCTGCTTCTaGGCGACTGTCAAAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFTVAVFVLCLQTVQKCQCGLCF*ATVKTD Trigger: GTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCCGCA...CTGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | ACGATCTTGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGATGCGGCCTCTGCTTCTaGGCGACTGTCAAAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TILALLLLSLFYVFKLYRCGLCF*ATVKTD Trigger: GTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCCGCA...TCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCAAGATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTAACTTTGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATTGCAGAGGAGGAGTACTGGGGTTTaGAGTCCCTACGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLTLGLEVLKQGYSLQRRSTGV*SPYEFV Trigger: AACAAACTCGTAGGGACTCCAAACCCCAGTACTCCT...CCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CAA 72 bp | GCACATAACACAAGACTAACTTTGGGCCTTGAAGTCTaGAAGCAAGGGTATTCATTGCAGAGGGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHNTRLTLGLEV*KQGYSLQRATV Trigger: AACAGTGGCCCTCTGCAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | ACGATCTTGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAATGGCTCCCTGGCAATaGACTGAGGTACAGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TILALLLLSLFYVFKLYRMAPWQ*TEVQCW Trigger: CCAACACTGTACCTCAGTTCATTGCCAGGGAGCCAT...TCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCAAGATCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR TCA 90 bp | TCTATGTCTTCAAACTGTACAGAAATGTCAGACCATGCATTCACAAATAACACACATCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSSNCTEMSDHAFTNNTHLGMQ*SGVGES Trigger: GCTTTCACCTACCCCGCTTCACTGCATGCCCAGATG...TGTGTTATTTGTGAATGCATGGTCTGACATTTCTGTACAGTTTGAAGACATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CCA 90 bp | GGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCAGAGGAGTACTGGGGTTTaGAGTCCCTACGAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFTVAVFVLCLQTVQKCQRSTGV*SPYEFV Trigger: AACAAACTCGTAGGGACTCCAAACCCCAGTACTCCT...CTGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| 3UTR CAA 72 bp | GGCCAGGCAGAGGGAGTCCACACATTTACAACACAATaGTGGAAAATTTTGATGCTAGAGATATGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQAEGVHTFTTQ*WKILMLEICFK Trigger: TTTGAAGCATATCTCTAGCATCAAAATTTTCCACAATTGTGTTGTAAATGTGTGGACTCCCTCTGCCTGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| 3UTR CAA 72 bp | CTCTGGAAATGTGTTGCACATAACACAAGACTAACTTaGGGCCTTGAAGTCTTGAAGCAAGGGTATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LWKCVAHNTRLT*GLEVLKQGYSL Trigger: CAATGAATACCCTTGCTTCAAGACTTCAAGGCCCAAAGTTAGTCTTGTGTTATGTGCAACACATTTCCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS TCA 90 bp | GGCCAGAGCCCTCAGGCCAGGGATGCTGGGAACCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGCGGCAGGAGGAGGAAGAGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GQSPQARDAGNLGMQ*SGVGESGRRRKSRR Trigger: GCGCCTGCTCTTCCTCCTCCTGCCGCTTTCACCTACCCCGCTTCACTGCATGCCCAGGTTCCCAGCATCCCTGGCCTGAGGGCTCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182926.8 ENSMUST00000183336.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGTAGGAGTCTCACAGTCAAGTGGCACGGGGGCTGGGGCCATGAGCAGTCCTACCCACAAGACAGATaGCAGCCGCCATCACACACC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSLTVKWHGGWGHEQSYPQDR*QPPSHT Trigger: GGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTA...GGACTGCTCATGGCCCCAGCCCCCGTGCCACTTGACTGTGAGACTCCTACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033994.15 |
||
| CDS-3UTR CAA 90 bp | GCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTTACAGCTCTCGGGGCTaGATGTCCAGAGGCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: APVLQNSWMTVATSEDRIYSSRG*MSRGRP Trigger: CGGTCTGCCTCTGGACATCAAGCCCCGAGAGCTGTA...AATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | GACCGCATTAATACCCACAAGACAGATTGCAGCCGCCATCACACACCCGAGACATACAGCTCTCGGGGCTaGATGTCCAGAGGCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: DRINTHKTDCSRHHTPETYSSRG*MSRGRP Trigger: CGGTCTGCCTCTGGACATCAAGCCCCGAGAGCTGTA...TGTCTCGGGTGTGTGATGGCGGCTGCAATCTGTCTTGTGGGTATTAATGCGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS GCA 90 bp | GTACAGAGGGTACGGGGCCCAAACTTCAGGGCTACTGGGGTAAAGTaGAGGTACTGTGAGCTCATATGGCTCCCTGGCAATGAACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQRVRGPNFRATGVK*RYCELIWLPGNELR Trigger: CCTCAGTTCATTGCCAGGGAGCCATATGAGCTCACAGTACCTGCACTTTACCCCAGTAGCCCTGAAGTTTGGGCCCCGTACCCTCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183062.2 ENSMUST00000183088.2 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGAGTGGGCAGGGCCTGCTCCTCTTGAGGCAATGGTTACCTCCAAACTAGAGGAGTACTGGGGTTaGGAGTCCCTACGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QAEWAGPAPLEAMVTSKLEEYWG*ESLRVC Trigger: ACAAACTCGTAGGGACTCCAAACCCCAGTACTCCTC...TAGTTTGGAGGTAACCATTGCCTCAAGAGGAGCAGGCCCTGCCCACTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | AGATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAAGCTCATTTCTACATACAGCTCTCGGGGCTaGATGTCCAGAGGCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: RSLGARITELVLQKLISTYSSRG*MSRGRP Trigger: CGGTCTGCCTCTGGACATCAAGCCCCGAGAGCTGTA...TGTAGAAATGAGCTTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | TATGTCCCTGGGCACAGTTGGTATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGCCTACGAGTTTGTTCTaGGCCATCTTCGTGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YVPGHSWYSLSWSGHGFQPTSLF*AIFVFA Trigger: GGCAAACACGAAGATGGCCAAGAACAAACTCGTAGG...CTGAAACCCATGGCCACTCCAGCTGAGACTATACCAACTGTGCCCAGGGACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACCAGTCCTACGAGTTTGTTCTaGGCCATCTTCGTGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSQQAPVLQNSWMTVATSPTSLF*AIFVFA Trigger: GGCAAACACGAAGATGGCCAAGAACAAACTCGTAGG...ACTGGTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTCAAGCCAGCAAGCTCCAGTTTTGCAGAACAGCTGGATGACAGTCGCCACGAGGAGTACTGGGGTTaGGAGTCCCTACGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFKPASSSFAEQLDDSRHEEYWG*ESLRVC Trigger: ACAAACTCGTAGGGACTCCAAACCCCAGTACTCCTC...GTGGCGACTGTCATCCAGCTGTTCTGCAAAACTGGAGCTTGCTGGCTTGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS TCA 90 bp | ATCGAAGCGGATGCCGTTCAAAGCGTTCTTTGCGGCCTCTGCTTCTaGGCGACTGTCAAAACTGACAAAGCCTACGGGCTGTTTAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: IEADAVQSVLCGLCF*ATVKTDKAYGLFRC Trigger: ACATCTAAACAGCCCGTAGGCTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCCGCAAAGAACGCTTTGAACGGCATCCGCTTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033994.15 ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000183088.2 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | AGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGATGAGGAGTACTGGGGTTaGGAGTCCCTACGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWMTVATSEDRINTHKTDEEYWG*ESLRVC Trigger: ACAAACTCGTAGGGACTCCAAACCCCAGTACTCCTC...ATCTGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | AACAGCTGGATGACAGTCGCCACCAGTGAAGACCGCATTAATACCCACAAGACAGAGGAGTACTGGGGTTaGGAGTCCCTACGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSWMTVATSEDRINTHKTEEYWG*ESLRVC Trigger: ACAAACTCGTAGGGACTCCAAACCCCAGTACTCCTC...TGTCTTGTGGGTATTAATGCGGTCTTCACTGGTGGCGACTGTCATCCAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | TTGTCTTGCAGAGAGATCCCTGGGAGCCAGGATTACAGAGCTAGTACTGCAGAACCTACGAGTTTGTTCTaGGCCATCTTCGTGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSCREIPGSQDYRASTAEPTSLF*AIFVFA Trigger: GGCAAACACGAAGATGGCCAAGAACAAACTCGTAGG...TTCTGCAGTACTAGCTCTGTAATCCTGGCTCCCAGGGATCTCTCTGCAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS CCA 90 bp | CTGTTTAGATGTGAGCTTTATGAGAGAACCTTCATAGCCCTTGAATaGTCTGAAGAGCAGGTACAGCTCTCGGGGCTTGATGTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFRCELYERTFIALE*SEEQVQLSGLDVQR Trigger: CCTCTGGACATCAAGCCCCGAGAGCTGTACCTGCTCTTCAGACCATTCAAGGGCTATGAAGGTTCTCTCATAAAGCTCACATCTAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033994.15 ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000183088.2 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | ACGATCTTGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGATACAGCTCTCGGGGCTaGATGTCCAGAGGCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: TILALLLLSLFYVFKLYRYSSRG*MSRGRP Trigger: CGGTCTGCCTCTGGACATCAAGCCCCGAGAGCTGTA...TCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCAAGATCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | TATAGTCTCAGCTGGAGTGGCCATGGGTTTCAGAGACATTACCTAAGTAGTCTTGAGGAGTACTGGGGTTaGGAGTCCCTACGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YSLSWSGHGFQRHYLSSLEEYWG*ESLRVC Trigger: ACAAACTCGTAGGGACTCCAAACCCCAGTACTCCTC...AAGACTACTTAGGTAATGTCTCTGAAACCCATGGCCACTCCAGCTGAGACTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCACGTTCAAAGCGTTCTTaGCGGCCTCTGCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLYCCCLCSMSSNCTEMSRSKRS*RPLLLS Trigger: GCTCAGAAGCAGAGGCCGCAAAGAACGCTTTGAACG...TGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTACTGTTGCTGTCTTTGTTCTATGTCTTCAAACTGTACAGAAATGTCACCTACGAGTTTGTTCTaGGCCATCTTCGTGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WLYCCCLCSMSSNCTEMSPTSLF*AIFVFA Trigger: GGCAAACACGAAGATGGCCAAGAACAAACTCGTAGG...TGACATTTCTGTACAGTTTGAAGACATAGAACAAAGACAGCAACAGTAAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033994.15 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000191473.7 |
||
| CDS TCA 72 bp | CCTCAGGCCAGGGATGCTGGGAACCTGGGCATGCAGTaGAGCGGGGTAGGTGAAAGCGGCAGGAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PQARDAGNLGMQ*SGVGESGRRRK Trigger: CTTCCTCCTCCTGCCGCTTTCACCTACCCCGCTTCACTGCATGCCCAGGTTCCCAGCATCCCTGGCCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182926.8 ENSMUST00000183336.8 |
||
| CDS TCA 72 bp | GAGGGATCCAGCGCATATGGCTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGAGGAGTACTGGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EGSSAYGSLAMN*GTVLGRGVLGF Trigger: AAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGAGCCATATGCGCTGGATCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033994.15 |
||
| CDS GCA 72 bp | GTACGGGGCCCAAACTTCAGGGCTACTGGGGTAAAGTaGAGGTACTGTGAGCTCATATGGCTCCCTGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VRGPNFRATGVK*RYCELIWLPGN Trigger: ATTGCCAGGGAGCCATATGAGCTCACAGTACCTGCACTTTACCCCAGTAGCCCTGAAGTTTGGGCCCCGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183062.2 ENSMUST00000183088.2 ENSMUST00000191473.7 |
||
| CDS TCA 72 bp | GATGCCGTTCAAAGCGTTCTTTGCGGCCTCTGCTTCTaGGCGACTGTCAAAACTGACAAAGCCTACGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DAVQSVLCGLCF*ATVKTDKAYGL Trigger: CAGCCCGTAGGCTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAGGCCGCAAAGAACGCTTTGAACGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033994.15 ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000183088.2 ENSMUST00000191473.7 |
||
| CDS TCA 72 bp | GGTACTGTGAGCTCATATGGCTCCCTGGCAATGAACTaGGGTACAGTGTTGGGCAGAGGAGTACTGGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GTVSSYGSLAMN*GTVLGRGVLGF Trigger: AAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAGTTCATTGCCAGGGAGCCATATGAGCTCACAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182256.8 ENSMUST00000182987.8 ENSMUST00000183062.2 ENSMUST00000183088.2 ENSMUST00000191473.7 |
||
| CDS CCA 72 bp | TGTGAGCTTTATGAGAGAACCTTCATAGCCCTTGAATaGTCTGAAGAGCAGGTACAGCTCTCGGGGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: CELYERTFIALE*SEEQVQLSGLD Trigger: ATCAAGCCCCGAGAGCTGTACCTGCTCTTCAGACCATTCAAGGGCTATGAAGGTTCTCTCATAAAGCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033994.15 ENSMUST00000033995.14 ENSMUST00000053251.12 ENSMUST00000182987.8 ENSMUST00000183088.2 ENSMUST00000191473.7 |
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| CDS CAA 72 bp | TCAACACGGGAGCTCCCTCTGCTGGTCTGCAGTAGGTaGATATGTGACAAACACATTCCCAGAGACAAATCT | + |
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Preference number: 6 (lower is better) Translates to: STRELPLLVCSR*ICDKHIPRDKS Trigger: AGATTTGTCTCTGGGAATGTGTTTGTCACATATCAACCTACTGCAGACCAGCAGAGGGAGCTCCCGTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033995.14 |
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