Pregenerated sensors for RBPJL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017007Ensembl transcript IDs: ENSMUST00000017151.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGATCTTTAGCCTTAGGCTCTTCCTCTGGGTCCTGAAGGAGAAGTaGCCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: RIFSLRLFLWVLKEK*PWDSEESRPRPLPD Trigger: GTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGGCCACTTCTCCTTCAGGACCCAGAGGAAGAGCCTAAGGCTAAAGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR TCA 90 bp | CTGGATACAGGAGGATCTTTAGCCTTAGGCTCTTCCTCTGGGTCCTaGAGGAGAAGTGGCCTTGGGACAGTGAAGAGAGCCGTCCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: LDTGGSLALGSSSGS*RRSGLGTVKRAVLG Trigger: GCCTAGGACGGCTCTCTTCACTGTCCCAAGGCCACTTCTCCTTCAGGACCCAGAGGAAGAGCCTAAGGCTAAAGATCCTCCTGTATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CCA 90 bp | ACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATaGGATAGTGATCAGAGACCAAACCCAGGCGAGGGTGCCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: TVKRAVLGLCLTLMS*DSDQRPNPGEGAIE Trigger: CTCTATGGCACCCTCGCCTGGGTTTGGTCTCTGATCACTATCCCATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CCA 90 bp | GTGTCACCACAGGCAGATAGACGCCTAGCTCTAAGAGGGACCTCATaGGATCAGGGCCCTAGACATTCTAGTCTTACTTCATGCAACTTG | + |
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Preference number: 1 (lower is better) Translates to: VSPQADRRLALRGTS*DQGPRHSSLTSCNL Trigger: CAAGTTGCATGAAGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAGGCGTCTATCTGCCTGTGGTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCACCACAGGCAGATAGACGCCTAGCTCTAAGAGGGACCTCATGGGATCAGTCCCTGAGGGACAGCTaGGGGCCTGGAGTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VSPQADRRLALRGTSWDQSLRDS*GPGVSL Trigger: GAGGCTGACTCCAGGCCCGCAGCTGTCCCTCAGGGA...CTGATCCCATGAGGTCCCTCTTAGAGCTAGGCGTCTATCTGCCTGTGGTGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CAA 90 bp | AGACTCTGGTTTGGATGGAATCCGGGGAGCACTCAGCCTTGCACCTaGCCATCCCTGTCCCCAGCACAGTGTTTCCCAGTCACCTGTACC | + |
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Preference number: 2 (lower is better) Translates to: RLWFGWNPGSTQPCT*PSLSPAQCFPVTCT Trigger: GGTACAGGTGACTGGGAAACACTGTGCTGGGGACAGGGATGGCAAGGTGCAAGGCTGAGTGCTCCCCGGATTCCATCCAAACCAGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CAA 90 bp | CTCCATCAGACTCTGGTTTGGATGGAATCCGGGGAGCACTCAGCCTaGCACCTTGCCATCCCTGTCCCCAGCACAGTGTTTCCCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LHQTLVWMESGEHSA*HLAIPVPSTVFPSH Trigger: GTGACTGGGAAACACTGTGCTGGGGACAGGGATGGCAAGGTGCAAGGCTGAGTGCTCCCCGGATTCCATCCAAACCAGAGTCTGATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CAA 90 bp | TTCAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTaGGATCCTCAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: FKWGHRCLESKSPIG*DPQNRSPTQEEPER Trigger: TCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTTTAGAACGTCACTCATaGTTGAAGACAGTTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: LALRGTSWDQGPRHSSLTLERHS*LKTVTV Trigger: TACAGTAACTGTCTTCAATCATGAGTGACGTTCTAA...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGAACGTCACTCATGATTaGAGACAGTTACTGTATGTC | + |
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Preference number: 2 (lower is better) Translates to: LVLLHATCFQVGTQMSGENVTHD*RQLLYV Trigger: GACATACAGTAACTGTCTTCAATCATGAGTGACGTT...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CCA 72 bp | AGGCTCTTCCTCTGGGTCCTGAAGGAGAAGTGGCCTTaGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RLFLWVLKEKWP*DSEESRPRPLP Trigger: AGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGGCCACTTCTCCTTCAGGACCCAGAGGAAGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR GCA 72 bp | TTGGATGGAATCCGGGGAGCACTCAGCCTTGCACCTTaGCATCCCTGTCCCCAGCACAGTGTTTCCCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LDGIRGALSLAP*HPCPQHSVSQS Trigger: TGACTGGGAAACACTGTGCTGGGGACAGGGATGGCAAGGTGCAAGGCTGAGTGCTCCCCGGATTCCATCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CCA 72 bp | AGCCTTAGGCTCTTCCTCTGGGTCCTGAAGGAGAAGTaGCCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SLRLFLWVLKEK*PWDSEESRPRP Trigger: AGGCCTAGGACGGCTCTCTTCACTGTCCCAAGGCCACTTCTCCTTCAGGACCCAGAGGAAGAGCCTAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR TCA 72 bp | GGAGGATCTTTAGCCTTAGGCTCTTCCTCTGGGTCCTaGAGGAGAAGTGGCCTTGGGACAGTGAAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: GGSLALGSSSGS*RRSGLGTVKRA Trigger: GGCTCTCTTCACTGTCCCAAGGCCACTTCTCCTTCAGGACCCAGAGGAAGAGCCTAAGGCTAAAGATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CCA 72 bp | AGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATaGGATAGTGATCAGAGACCAAACCCAGGCGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RAVLGLCLTLMS*DSDQRPNPGEG Trigger: ACCCTCGCCTGGGTTTGGTCTCTGATCACTATCCCATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR GCA 72 bp | GGCCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTaGCTGACATTAATGTCATGGGATAGTGATCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GLGTVKRAVLGL*LTLMSWDSDQR Trigger: TCTCTGATCACTATCCCATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CCA 72 bp | CAGGCAGATAGACGCCTAGCTCTAAGAGGGACCTCATaGGATCAGGGCCCTAGACATTCTAGTCTTACTTCA | + |
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Preference number: 3 (lower is better) Translates to: QADRRLALRGTS*DQGPRHSSLTS Trigger: TGAAGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAGGCGTCTATCTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGCTTACTTCATGCAACTaGTTTTCAAGTGGGGACACA | + |
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Preference number: 3 (lower is better) Translates to: PWDSEESRPRPLPDINVMLTSCN*FSSGDT Trigger: TGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAG...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR GCA 72 bp | TGGGATCAGGGCCCTAGACATTCTAGTCTTACTTCATaGAACTTGTTTTCAAGTGGGGACACAGATGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WDQGPRHSSLTS*NLFSSGDTDVW Trigger: CCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAGAATGTCTAGGGCCCTGATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | GTGTCACCACAGGCAGATAGACGCCTAGCTCTAAGAGGGACCTCATGGGATCAGGGCATGCTCTGGGGGTaGCCTGGTCCAACTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSPQADRRLALRGTSWDQGMLWG*PGPTPQ Trigger: CTGGGGAGTTGGACCAGGTCACCCCCAGAGCATGCC...CTGATCCCATGAGGTCCCTCTTAGAGCTAGGCGTCTATCTGCCTGTGGTGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTTCCGGCAGGCTCAGGTaGGTCAAAGGGCCCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LALRGTSWDQGPRHSSLTSGRLR*VKGPGG Trigger: GCCCCCGGGCCCTTTGACTCACCTGAGCCTGCCGGA...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CTTGGATCCTCAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGGGCGACTGTGGAAAGTaGCCAGCTCCTGGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LGSSEPVTDPGRARKRQKGDCGK*PAPGPL Trigger: GAGGGGGCCAGGAGCTGGGCACTTTCCACAGTCGCC...CTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTGAGGATCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAGGCAGCCCACTGCCTTaGGCTGGCCACAAAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QNRSPTQEEPERDKSGRIGSPLP*AGHKGP Trigger: GGGGCCTTTGTGGCCAGCGCAAGGCAGTGGGCTGCC...TATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | GTGTCACCACAGGCAGATAGACGCCTAGCTCTAAGAGGGACCTCATGGGATCAGAAAGTGCCCAGCTCCTaGCCCCCTCGCAGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: VSPQADRRLALRGTSWDQKVPSS*PPRSTS Trigger: ACTGGTGCTGCGAGGGGGCCAGGAGCTGGGCACTTT...CTGATCCCATGAGGTCCCTCTTAGAGCTAGGCGTCTATCTGCCTGTGGTGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCACAGCCAGGTGGAGGGTaGAGGCAGCCCACTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSQPGGG*RQPTAL Trigger: CAAGGCAGTGGGCTGCCTTCACCCTCCACCTGGCTG...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | GTGTCACCACAGGCAGATAGACGCCTAGCTCTAAGAGGGACCTCATGGGATCAGGTGAAGGCAGCCCACTaGCTTGCGCTGGCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VSPQADRRLALRGTSWDQVKAAH*LALATK Trigger: CTTTGTGGCCAGCGCAAGGCAGTGGGCTGCCTTCAC...CTGATCCCATGAGGTCCCTCTTAGAGCTAGGCGTCTATCTGCCTGTGGTGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCAGCTCTGGGGGTGACCTaGTCCAACTCCCCAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSALGVT*SNSPGG Trigger: GCCTCCTGGGGAGTTGGACCAGGTCACCCCCAGAGC...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTTGGATCCTCAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGTGTAACCGCAGACGGTaGGCCCGGTCTCCGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: LGSSEPVTDPGRARKRQKCNRRR*ARSPQI Trigger: AATCTGCGGAGACCGGGCCCACCGTCTGCGGTTACA...CTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTGAGGATCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATATGCCCATCAGCCAGGTaGAGGGTGAAGGCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QNRSPTQEEPERDKSGRICPSAR*RVKAAH Trigger: GTGGGCTGCCTTCACCCTCCACCTGGCTGATGGGCA...TATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTTGGATCCTCAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGGGTGCCAGCCCCTCCTaGGGTGTCACTTGGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LGSSEPVTDPGRARKRQKGASPS*GVTWKL Trigger: CAGTTTCCAAGTGACACCCCAGGAGGGGCTGGCACC...CTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTGAGGATCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGCGTGTGAACTCGTGGTaGATGCTCTCCAGGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PWDSEESRPRPLPDINVMRVNSW*MLSRSV Trigger: CACGCTCCTGGAGAGCATCCACCACGAGTTCACACG...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGGTGCGTGTGAACTCGTaGTGGATGCTCTCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PWDSEESRPRPLPDINVMVRVNS*WMLSRS Trigger: GCTCCTGGAGAGCATCCACCACGAGTTCACACGCAC...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| 3UTR CAA 72 bp | GGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTaGGATCCTCAGAACCGGTCACCGACCCAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GHRCLESKSPIG*DPQNRSPTQEE Trigger: CTCTTCCTGGGTCGGTGACCGGTTCTGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGGGAAGTTGGTGCGTGTaGACTCGTGGTGGATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PWDSEESRPRPLPDINVMGSWCV*TRGGCS Trigger: AGAGCATCCACCACGAGTTCACACGCACCAACTTCC...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGGCCAACGCCAGTCGCTaGCGAAGGCCGCCACGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEANASR*RRPPRL Trigger: CAGACGTGGCGGCCTTCGGCAGCGACTGGCGTTGGC...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCACGCGTGGACACTGTCTaGGAGCGCAGGCGATTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSRVDTV*ERRRLK Trigger: TTTCAATCGCCTGCGCTCCCAGACAGTGTCCACGCG...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | GAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAAACCCACTGCCTTGCGCTaGCCACAAAGGCCCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: EPVTDPGRARKRQKRKNKPTALR*PQRPHL Trigger: AAGATGGGGCCTTTGTGGCCAGCGCAAGGCAGTGGG...TTTATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | GAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAAAGAAGGCCGCCACGTCTaGCACTACGCACACCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EPVTDPGRARKRQKRKNKEGRHV*HYAHQG Trigger: TCCTTGGTGTGCGTAGTGCCAGACGTGGCGGCCTTC...TTTATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGGAGGTAGACACAGGGTaGAGGACAGAAGAACCGCTT | + |
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Preference number: 4 (lower is better) Translates to: PWDSEESRPRPLPDINVMEVDTG*RTEEPL Trigger: AAGCGGTTCTTCTGTCCTCCACCCTGTGTCTACCTC...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTGGCTTGGTCTTGCATTaGCTTCACCCTCCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LALRGTSWDQGPRHSSLTGLVLH*LHPPAR Trigger: CCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCC...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGCGTGCAGCTCCAGCGTaGCCACATCACCTCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGERAAPA*PHHLHR Trigger: GCGGTGGAGGTGATGTGGCCACGCTGGAGCTGCACG...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTCACCTTCTCTTAGGATaGTGGCATGCTCTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LALRGTSWDQGPRHSSLTHLLLG*WHALGV Trigger: CACCCCCAGAGCATGCCATCATCCTAAGAGAAGGTG...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCAGCAGATTGGAGGGCTTaGTCTTGCATTGGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSADWRA*SCIGFT Trigger: GGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGC...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTTTGATGAGGCGACTGTaGAAAGTGCCCAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LALRGTSWDQGPRHSSLTLMRRL*KVPSSW Trigger: CCAGGAGCTGGGCACTTTCCACAGTCGCCTCATCAA...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | GAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAAAGAGGGCTCCTGTACATaGTTTCTGCCTCCACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EPVTDPGRARKRQKRKNKEGSCT*FLPPRL Trigger: GAGACGTGGAGGCAGAAACCATGTACAGGAGCCCTC...TTTATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCAGTGGGGCAGAAGAGATaGAAGTTGGTGCGTGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSVGQKR*KLVRVN Trigger: GTTCACACGCACCAACTTCCATCTCTTCTGCCCCAC...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGAGCAAGAGCTGTCGTTaGGCAGCGCCCTGTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGESKSCR*AAPCWP Trigger: AGGCCAACAGGGCGCTGCTCAACGACAGCTCTTGCT...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGTCCCCTTGGGAACAGTaGCCATCAGCCAGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGESPWEQ*PSARWR Trigger: CCTCCACCTGGCTGATGGGCACTGTTCCCAAGGGGA...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGGGTGGGAAGTCCCCTTaGGAACAGTGCCCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEGGKSP*EQCPSA Trigger: GGCTGATGGGCACTGTTCCCAAGGGGACTTCCCACC...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCAGCACACTTGTGCAGCTaGGATATGGGTTCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSAHLCS*DMGSST Trigger: TGTGGATGAACCCATATCCCAGCTGCACAAGTGTGC...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | GAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAAAACCTTGAGCCCAGCGTaGAAATTTTCTCCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPVTDPGRARKRQKRKNKTLSPA*KFSPCS Trigger: GCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGT...TTTATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGCCGACTCCGTGCCAATaGTGGTCCAGCAAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEPTPCQ*WSSKSC Trigger: ACAGCTCTTGCTGGACCATCATTGGCACGGAGTCGG...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | GAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAAAGTGTTTTTCAGCGACTaGTTCTTCTGCGAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPVTDPGRARKRQKRKNKVFFSD*FFCEGL Trigger: CAAGCCCTCGCAGAAGAAGCAGTCGCTGAAAAACAC...TTTATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGCAAGGCATAAGTAGGTaGCAGCCCCTCCTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEQGISR*QPLLGC Trigger: ACACCCCAGGAGGGGCTGGCACCTACTTATGCCTTG...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS-3UTR GCA 90 bp | CAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATATTGAGCCGGAGGAGATaGATAGGTCTGTGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNRSPTQEEPERDKSGRILSRRR*IGLCFS Trigger: TGAAAAACACAGACCTATGCATCTCCTCCGGCTCAA...TATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGGTAACCTTCCTGGGGTaGGAAGTCCCCTTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEVTFLG*EVPLGT Trigger: TGTTCCCAAGGGGACTTCCCACCCCAGGAAGGTTAC...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTTGTGCAGCTGGGATATaGGTTCATCCACATCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LALRGTSWDQGPRHSSLTCAAGI*VHPHQG Trigger: TCCTTGATGTGGATGAACCCATATCCCAGCTGCACA...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | ATTCTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGGGAGCGCAGGCGATTaGAAAGGGAGACCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILVLLHATCFQVGTQMSGGSAGD*KGRPLS Trigger: GCTCAAAGGTCTCCCTTTTCAATCGCCTGCGCTCCC...TCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR TCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGCTCCGAACCACACCTTaGGCCCAGCGTGGAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGELRTTP*AQRGNF Trigger: AAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAG...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGTGGAAATTTTCTCCGTaGAGCTCCAGCGTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEWKFSP*SSSVAT Trigger: TGTGGCCACGCTGGAGCTGCACGGAGAAAATTTCCA...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGCCTGTACATGGTTTCTaGCTCCACGTCTCCGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLLHATCFQVGTQMSGEPVHGF*LHVSEP Trigger: TGGTTCGGAGACGTGGAGGCAGAAACCATGTACAGG...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CCA 90 bp | ATTCTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGCACCACCTTCTCTGTaGCAAGGCATAAGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILVLLHATCFQVGTQMSGAPPSL*QGISRC Trigger: GCACCTACTTATGCCTTGCCACAGAGAAGGTGGTGC...TCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 90 bp | TGGGGTAGAAGAGCGCATCCGCGCGCAGCAAGCTCACGGGCACGGTaGTGGGGGTGCGGAGCCAACGCCAGTCGCTGCCGAAGGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGRRAHPRAASSRAR*WGCGANASRCRRPP Trigger: TGGCGGCCTTCGGCAGCGACTGGCGTTGGCTCCGCACCCCCATCACCGTGCCCGTGAGCTTGCTGCGCGCGGATGCGCTCTTCTACCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 90 bp | CCGTCGCTCTGTAGCCGCACCTCTGAGCTGTCCGGCAGGCTCAGGTaGGTCAAAGGGCCCGGGGGCAACGAGGGGTCTGTTGTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSLCSRTSELSGRLR*VKGPGGNEGSVVSL Trigger: CAGGGAGACAACAGACCCCTCGTTGCCCCCGGGCCCTTTGACTCACCTGAGCCTGCCGGACAGCTCAGAGGTGCGGCTACAGAGCGACGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | GACGGTGGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTTGCATTaGCTTCACCCTCCAGCCAGGACCCGCGAGGTAGACACAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DGGPGLRRLEGLVLH*LHPPARTREVDTGW Trigger: CCACCCTGTGTCTACCTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | GAGCGCTGCCGGACGCACCGTCCAGTCCCATGTAACCGCAGACGGTaGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTTGCATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERCRTHRPVPCNRRR*ARSPQIGGLGLALA Trigger: AGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCTGCGGTTACATGGGACTGGACGGTGCGTCCGGCAGCGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | GGGGGTGCGGAGCCAACGCCAGTCGCTGCCGAAGGCCGCCACGTCTaGCACTACGCACACCAAGGAACGAGGGCTCCTGTACATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGAEPTPVAAEGRHV*HYAHQGTRAPVHGF Trigger: GAAACCATGTACAGGAGCCCTCGTTCCTTGGTGTGCGTAGTGCCAGACGTGGCGGCCTTCGGCAGCGACTGGCGTTGGCTCCGCACCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | AGTCCGGCTGCTCTTCAAAGTTCAACTTCTGGGTCTCGGGAGCGCTaGCGGACGCACCGTCCAGTCCCATGTAACCGCAGACGGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPAALQSSTSGSRER*RTHRPVPCNRRRWA Trigger: GGCCCACCGTCTGCGGTTACATGGGACTGGACGGTGCGTCCGGCAGCGCTCCCGAGACCCAGAAGTTGAACTTTGAAGAGCAGCCGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | CTTTGCTGCAGGCATGTGCGCACACCTTCTCTTAGGATGATGGCATaGTCTGGGGGTGACCTGGTCCAACTCCCCAGGAGGCTGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCCRHVRTPSLRMMA*SGGDLVQLPRRLGP Trigger: CGGGCCCAGCCTCCTGGGGAGTTGGACCAGGTCACCCCCAGAGCATGCCATCATCCTAAGAGAAGGTGTGCGCACATGCCTGCAGCAAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | ACAGTGCCCATCAGCCAGGTGGAGGGTGAAGGCAGCCCACTGCCTTaGGCTGGCCACAAAGGCCCCATCTTCCACAGAGAGGTAACGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TVPISQVEGEGSPLP*AGHKGPIFHREVTR Trigger: ACGCGTTACCTCTCTGTGGAAGATGGGGCCTTTGTGGCCAGCGCAAGGCAGTGGGCTGCCTTCACCCTCCACCTGGCTGATGGGCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CAA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGGCCCTGTTGGCCTCCTaGGGGCAGAGGGAAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWDSEESRPRPLPDINVMALLAS*GQREAW Trigger: CCAGGCTTCCCTCTGCCCCAAGGAGGCCAACAGGGC...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 90 bp | GCTCACATCTTTGCTGCAGGCATGTGCGCACACCTTCTCTTAGGATaGTGGCATGCTCTGGGGGTGACCTGGTCCAACTCCCCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHIFAAGMCAHLLLG*WHALGVTWSNSPGG Trigger: GCCTCCTGGGGAGTTGGACCAGGTCACCCCCAGAGCATGCCATCATCCTAAGAGAAGGTGTGCGCACATGCCTGCAGCAAAGATGTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 90 bp | GGCTCCTGTACATGGTTTCTGCCTCCACGTCTCCGAACCACACCTTaGGCCCAGCGTGGAAATTTTCTCCGTGCAGCTCCAGCGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSCTWFLPPRLRTTP*AQRGNFLRAAPAWP Trigger: TGGCCACGCTGGAGCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCATGTACAGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CAA 90 bp | CAAGTGGGGACACAGATGTCTGGAGAGCAAATCCCCAATAGGCTTGGATCCTCAAGGCAGCCCACTGCCTaGCGCTGGCCACAAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QVGTQMSGEQIPNRLGSSRQPTA*RWPQRP Trigger: GGGCCTTTGTGGCCAGCGCAAGGCAGTGGGCTGCCT...TGAGGATCCAAGCCTATTGGGGATTTGCTCTCCAGACATCTGTGTCCCCACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CAA 90 bp | CTTGGATCCTCAGAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGTTGAGCAGCGCCCTGTaGGCCTCCTTGGGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSSEPVTDPGRARKRQKLSSAL*ASLGQR Trigger: CCTCTGCCCCAAGGAGGCCAACAGGGCGCTGCTCAA...CTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTCTGAGGATCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | CCAGCCCCTCCTGGGGTGTCACTTGGAAACTGGAAGGCACACTTGTaGAGCTGGGATATGGGTTCATCCACATCAAGGAGGGCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPPGVSLGNWKAHL*SWDMGSSTSRRAHC Trigger: GCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCAGCTGCACAAGTGTGCCTTCCAGTTTCCAAGTGACACCCCAGGAGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | ATGGTTTCTGCCTCCACGTCTCCGAACCACACCTTGAGCCCAGCGTaGAAATTTTCTCCGTGCAGCTCCAGCGTGGCCACATCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MVSASTSPNHTLSPA*KFSPCSSSVATSPP Trigger: TGGAGGTGATGTGGCCACGCTGGAGCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | AAGCCTGGAATCGCACCACCTTCTCTGTGGCAAGGCATAAGTAGGTaGCAGCCCCTCCTGGGGTGTCACTTGGAAACTGGAAGGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: KPGIAPPSLWQGISR*QPLLGCHLETGRHT Trigger: AGTGTGCCTTCCAGTTTCCAAGTGACACCCCAGGAGGGGCTGGCACCTACTTATGCCTTGCCACAGAGAAGGTGGTGCGATTCCAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | TGGCACTACGCACACCAAGGAACGAGGGCTCCTGTACATGGTTTCTaGCTCCACGTCTCCGAACCACACCTTGAGCCCAGCGTGGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: WHYAHQGTRAPVHGF*LHVSEPHLEPSVEI Trigger: AATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCATGTACAGGAGCCCTCGTTCCTTGGTGTGCGTAGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | CCTCCTGGGGTGTCACTTGGAAACTGGAAGGCACACTTGTGCAGCTaGGATATGGGTTCATCCACATCAAGGAGGGCACACTGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPGVSLGNWKAHLCS*DMGSSTSRRAHCLA Trigger: GGCCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCAGCTGCACAAGTGTGCCTTCCAGTTTCCAAGTGACACCCCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CAA 90 bp | GAACCGGTCACCGACCCAGGAAGAGCCAGAAAGAGACAAAAGCGGAAGAATAAAGGGTGGGAAGTCCCCTaGGGAACAGTGCCCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPVTDPGRARKRQKRKNKGWEVP*GTVPIS Trigger: GCTGATGGGCACTGTTCCCAAGGGGACTTCCCACCC...TTTATTCTTCCGCTTTTGTCTCTTTCTGGCTCTTCCTGGGTCGGTGACCGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | GCCGGAAGTGCTTCCTCTTATCGGCGTCCGAGATGTACAGGGTCTTaGCACAACCAAATTCCCTGGAGTCCGGCTGCTCTTCAAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSASSYRRPRCTGS*HNQIPWSPAALQSS Trigger: TGAACTTTGAAGAGCAGCCGGACTCCAGGGAATTTGGTTGTGCCAAGACCCTGTACATCTCGGACGCCGATAAGAGGAAGCACTTCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 90 bp | ACCTTTGAGCCGGAGGAGATGCATAGGTCTGTGTTTTTCAGCGACTaGTTCTTCTGCGAGGGCTTGGAGATCACCTTGATGAGGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: TFEPEEMHRSVFFSD*FFCEGLEITLMRRL Trigger: CAGTCGCCTCATCAAGGTGATCTCCAAGCCCTCGCAGAAGAAGCAGTCGCTGAAAAACACAGACCTATGCATCTCCTCCGGCTCAAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 90 bp | GGGTGTCACTTGGAAACTGGAAGGCACACTTGTGCAGCTGGGATATaGGTTCATCCACATCAAGGAGGGCACACTGCTTGGCCACTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GCHLETGRHTCAAGI*VHPHQGGHTAWPLF Trigger: GAAAAGTGGCCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCAGCTGCACAAGTGTGCCTTCCAGTTTCCAAGTGACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CAA 90 bp | CCTTGGGACAGTGAAGAGAGCCGTCCTAGGCCTCTGCCTGACATTAATGTCATGAACTGGAAGGCACACTaGTGCAGCTGGGATATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PWDSEESRPRPLPDINVMNWKAH*CSWDMG Trigger: ACCCATATCCCAGCTGCACAAGTGTGCCTTCCAGTT...CATGACATTAATGTCAGGCAGAGGCCTAGGACGGCTCTCTTCACTGTCCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS GCA 90 bp | TTGTGCAGCTGGGATATGGGTTCATCCACATCAAGGAGGGCACACTaGTTGGCCACTTTTCGGATGATCATAGGCGGCAGTGTAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCSWDMGSSTSRRAH*LATFRMIIGGSVMP Trigger: AGGCATTACACTGCCGCCTATGATCATCCGAAAAGTGGCCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCAGCTGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTTGGGAGCGCAGGCGATaGAAAAGGGAGACCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LALRGTSWDQGPRHSSLTWERRR*KRETFE Trigger: CTCAAAGGTCTCCCTTTTCAATCGCCTGCGCTCCCA...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS-3UTR CAA 90 bp | CTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAGAGCAGCAAGAGCTGTCGTaGAGCAGCGCCCTGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLHATCFQVGTQMSGEQQELS*SSALLA Trigger: GGCCAACAGGGCGCTGCTCAACGACAGCTCTTGCTG...CTCTCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTTTCTTCTGCGAGGGCTaGGAGATCACCTTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LALRGTSWDQGPRHSSLTFFCEG*EITLMR Trigger: CCTCATCAAGGTGATCTCCAAGCCCTCGCAGAAGAA...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCTCTAAGAGGGACCTCATGGGATCAGGGCCCTAGACATTCTAGTCTTACTGAGATGTACAGGGTCTaGGCACAACCAAATTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LALRGTSWDQGPRHSSLTEMYRV*AQPNSL Trigger: CAGGGAATTTGGTTGTGCCAAGACCCTGTACATCTC...AGTAAGACTAGAATGTCTAGGGCCCTGATCCCATGAGGTCCCTCTTAGAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGTCTTACTTCATGCAACTTGTTTTCAAGTGGGGACACAGATGTCTGGAAGTCTGCTCACATCTTaGCTGCAGGCATGTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILVLLHATCFQVGTQMSGSLLTS*LQACAH Trigger: GTGCGCACATGCCTGCAGCAAAGATGTGAGCAGACT...TCCAGACATCTGTGTCCCCACTTGAAAACAAGTTGCATGAAGTAAGACTAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
||
| CDS CCA 72 bp | GGAGCGTGTCCGCGTCGGGGGCAGGCTCTTGCGCGTTaGGCAGCCGTGGCAGCGCGCTGTATTCCGGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GACPRRGQALAR*AAVAARCIPGC Trigger: ACACCCCGGAATACAGCGCGCTGCCACGGCTGCCCAACGCGCAAGAGCCTGCCCCCGACGCGGACACGCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | AGGAGCGTGTCCGCGTCGGGGGCAGGCTCTTGCGCGTaGGGCAGCCGTGGCAGCGCGCTGTATTCCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSVSASGAGSCA*GSRGSALYSGV Trigger: CACCCCGGAATACAGCGCGCTGCCACGGCTGCCCAACGCGCAAGAGCCTGCCCCCGACGCGGACACGCTCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 72 bp | AGAGCGCATCCGCGCGCAGCAAGCTCACGGGCACGGTaGTGGGGGTGCGGAGCCAACGCCAGTCGCTGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RAHPRAASSRAR*WGCGANASRCR Trigger: TCGGCAGCGACTGGCGTTGGCTCCGCACCCCCATCACCGTGCCCGTGAGCTTGCTGCGCGCGGATGCGCTCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | CTCTCCAGGAGCGTGTCCGCGTCGGGGGCAGGCTCTTaGGCGTTGGGCAGCCGTGGCAGCGCGCTGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRSVSASGAGS*ALGSRGSALYS Trigger: GGAATACAGCGCGCTGCCACGGCTGCCCAACGCGCAAGAGCCTGCCCCCGACGCGGACACGCTCCTGGAGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | GCTCTCCAGGAGCGTGTCCGCGTCGGGGGCAGGCTCTaGCGCGTTGGGCAGCCGTGGCAGCGCGCTGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQERVRVGGRL*RVGQPWQRAVF Trigger: GAATACAGCGCGCTGCCACGGCTGCCCAACGCGCAAGAGCCTGCCCCCGACGCGGACACGCTCCTGGAGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | GTGGTGGATGCTCTCCAGGAGCGTGTCCGCGTCGGGGGCAGGCTCTaGCGCGTTGGGCAGCCGTGGCAGCGCGCTGTATTCCGGGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VVDALQERVRVGGRL*RVGQPWQRAVFRGV Trigger: TACACCCCGGAATACAGCGCGCTGCCACGGCTGCCCAACGCGCAAGAGCCTGCCCCCGACGCGGACACGCTCCTGGAGAGCATCCACCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | CGCGTCGGGGGCAGGCTCTTGCGCGTTGGGCAGCCGTaGCAGCGCGCTGTATTCCGGGGTGTAGGTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVGGRLLRVGQP*QRAVFRGVGER Trigger: TCTTTCACCTACACCCCGGAATACAGCGCGCTGCCACGGCTGCCCAACGCGCAAGAGCCTGCCCCCGACGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | GTGGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTTaGATTGGCTTCACCCTCCAGCCAGGACCCGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGPVSADWRAWS*IGFTLQPGPAR Trigger: CCTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | GGTGGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTaGCATTGGCTTCACCCTCCAGCCAGGACCCGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGPGLRRLEGLV*HWLHPPARTRE Trigger: CTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | CAGACGGTGGGCCCGGTCTCCGCAGATTGGAGGGCTTaGTCTTGCATTGGCTTCACCCTCCAGCCAGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: QTVGPVSADWRA*SCIGFTLQPGP Trigger: GGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | CGGACGCACCGTCCAGTCCCATGTAACCGCAGACGGTaGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTHRPVPCNRRR*ARSPQIGGLGL Trigger: AAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCTGCGGTTACATGGGACTGGACGGTGCGTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | GAGCCAACGCCAGTCGCTGCCGAAGGCCGCCACGTCTaGCACTACGCACACCAAGGAACGAGGGCTCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: EPTPVAAEGRHV*HYAHQGTRAPV Trigger: TACAGGAGCCCTCGTTCCTTGGTGTGCGTAGTGCCAGACGTGGCGGCCTTCGGCAGCGACTGGCGTTGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | GCAGACGGTGGGCCCGGTCTCCGCAGATTGGAGGGCTaGGTCTTGCATTGGCTTCACCCTCCAGCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ADGGPGLRRLEG*VLHWLHPPART Trigger: GGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | AGACGGTGGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTTGCATaGGCTTCACCCTCCAGCCAGGACCCGCGAGGTAGACACAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRWARSPQIGGLGLA*ASPSSQDPRGRHRV Trigger: CACCCTGTGTCTACCTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | ACCGCAGACGGTGGGCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTaGCATTGGCTTCACCCTCCAGCCAGGACCCGCGAGGTAGACACA | + |
|
Preference number: 6 (lower is better) Translates to: TADGGPGLRRLEGLV*HWLHPPARTREVDT Trigger: TGTGTCTACCTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCTGCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | CCCCCTCGCAGCACCAGTCGCAGCACCAGCCGGAAGTaGTTCCTCTTATCGGCGTCCGAGATGTACAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPRSTSRSTSRK*FLLSASEMYRV Trigger: GACCCTGTACATCTCGGACGCCGATAAGAGGAAGCACTTCCGGCTGGTGCTGCGACTGGTGCTGCGAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | CCCGGTCTCCGCAGATTGGAGGGCTTGGTCTTGCATTaGCTTCACCCTCCAGCCAGGACCCGCGAGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGLRRLEGLVLH*LHPPARTREVD Trigger: GTCTACCTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | GCCCGGTCTCCGCAGATTGGAGGGCTTGGTCTTGCATaGGCTTCACCCTCCAGCCAGGACCCGCGAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARSPQIGGLGLA*ASPSSQDPRGR Trigger: TCTACCTCGCGGGTCCTGGCTGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | TCCCTGGAGTCCGGCTGCTCTTCAAAGTTCAACTTCTaGGTCTCGGGAGCGCTGCCGGACGCACCGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLESGCSSKFNF*VSGALPDAPSS Trigger: ACTGGACGGTGCGTCCGGCAGCGCTCCCGAGACCCAGAAGTTGAACTTTGAAGAGCAGCCGGACTCCAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | GGCAGAGGGAAGCCTGGAATCGCACCACCTTCTCTGTaGCAAGGCATAAGTAGGTGCCAGCCCCTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGKPGIAPPSL*QGISRCQPLLG Trigger: CCCCAGGAGGGGCTGGCACCTACTTATGCCTTGCCACAGAGAAGGTGGTGCGATTCCAGGCTTCCCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | GGGCAGAAGAGATGGAAGTTGGTGCGTGTGAACTCGTaGTGGATGCTCTCCAGGAGCGTGTCCGCGTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GQKRWKLVRVNS*WMLSRSVSASG Trigger: CCCCGACGCGGACACGCTCCTGGAGAGCATCCACCACGAGTTCACACGCACCAACTTCCATCTCTTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | GACTCCGTGCCAATGATGGTCCAGCAAGAGCTGTCGTaGAGCAGCGCCCTGTTGGCCTCCTTGGGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSVPMMVQQELS*SSALLASLGQR Trigger: CCTCTGCCCCAAGGAGGCCAACAGGGCGCTGCTCAACGACAGCTCTTGCTGGACCATCATTGGCACGGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | GTGCCAATGATGGTCCAGCAAGAGCTGTCGTTGAGCAGCGCCCTGTaGGCCTCCTTGGGGCAGAGGGAAGCCTGGAATCGCACCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VPMMVQQELSLSSAL*ASLGQREAWNRTTF Trigger: GAAGGTGGTGCGATTCCAGGCTTCCCTCTGCCCCAAGGAGGCCAACAGGGCGCTGCTCAACGACAGCTCTTGCTGGACCATCATTGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | GCCTCCACGTCTCCGAACCACACCTTGAGCCCAGCGTaGAAATTTTCTCCGTGCAGCTCCAGCGTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ASTSPNHTLSPA*KFSPCSSSVAT Trigger: TGTGGCCACGCTGGAGCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | CAGAAGAGATGGAAGTTGGTGCGTGTGAACTCGTGGTaGATGCTCTCCAGGAGCGTGTCCGCGTCGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QKRWKLVRVNSW*MLSRSVSASGA Trigger: TGCCCCCGACGCGGACACGCTCCTGGAGAGCATCCACCACGAGTTCACACGCACCAACTTCCATCTCTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | CATGTAACCGCAGACGGTGGGCCCGGTCTCCGCAGATaGGAGGGCTTGGTCTTGCATTGGCTTCACCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HVTADGGPGLRR*EGLVLHWLHPP Trigger: TGGAGGGTGAAGCCAATGCAAGACCAAGCCCTCCAATCTGCGGAGACCGGGCCCACCGTCTGCGGTTACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | GGGCTCCTGTACATGGTTTCTGCCTCCACGTCTCCGAACCACACCTaGAGCCCAGCGTGGAAATTTTCTCCGTGCAGCTCCAGCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLYMVSASTSPNHT*SPAWKFSPCSSSVA Trigger: GGCCACGCTGGAGCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCATGTACAGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | GCTCTTCAAAGTTCAACTTCTGGGTCTCGGGAGCGCTaGCGGACGCACCGTCCAGTCCCATGTAACCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALQSSTSGSRER*RTHRPVPCNRR Trigger: TCTGCGGTTACATGGGACTGGACGGTGCGTCCGGCAGCGCTCCCGAGACCCAGAAGTTGAACTTTGAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | GCACACCAAGGAACGAGGGCTCCTGTACATGGTTTCTaGCTCCACGTCTCCGAACCACACCTTGAGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AHQGTRAPVHGF*LHVSEPHLEPS Trigger: GCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCATGTACAGGAGCCCTCGTTCCTTGGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | AGCGACTGCTTCTTCTGCGAGGGCTTGGAGATCACCTaGATGAGGCGACTGTGGAAAGTGCCCAGCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SDCFFCEGLEIT*MRRLWKVPSSW Trigger: CCAGGAGCTGGGCACTTTCCACAGTCGCCTCATCAAGGTGATCTCCAAGCCCTCGCAGAAGAAGCAGTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 72 bp | TTTGCTGCAGGCATGTGCGCACACCTTCTCTTAGGATaGTGGCATGCTCTGGGGGTGACCTGGTCCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FAAGMCAHLLLG*WHALGVTWSNS Trigger: GGAGTTGGACCAGGTCACCCCCAGAGCATGCCATCATCCTAAGAGAAGGTGTGCGCACATGCCTGCAGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | ATCGCACCACCTTCTCTGTGGCAAGGCATAAGTAGGTaGCAGCCCCTCCTGGGGTGTCACTTGGAAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IAPPSLWQGISR*QPLLGCHLETG Trigger: TCCAGTTTCCAAGTGACACCCCAGGAGGGGCTGGCACCTACTTATGCCTTGCCACAGAGAAGGTGGTGCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS TCA 72 bp | ACATGGTTTCTGCCTCCACGTCTCCGAACCACACCTTaGGCCCAGCGTGGAAATTTTCTCCGTGCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TWFLPPRLRTTP*AQRGNFLRAAP Trigger: TGGAGCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | AGGGTCTTGGCACAACCAAATTCCCTGGAGTCCGGCTaGTCTTCAAAGTTCAACTTCTGGGTCTCGGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVLAQPNSLESG*SSKFNFWVSGA Trigger: CGCTCCCGAGACCCAGAAGTTGAACTTTGAAGAGCAGCCGGACTCCAGGGAATTTGGTTGTGCCAAGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | GCTTCCTCTTATCGGCGTCCGAGATGTACAGGGTCTTaGCACAACCAAATTCCCTGGAGTCCGGCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSYRRPRCTGS*HNQIPWSPAAL Trigger: AAGAGCAGCCGGACTCCAGGGAATTTGGTTGTGCCAAGACCCTGTACATCTCGGACGCCGATAAGAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | TGCTTCCTCTTATCGGCGTCCGAGATGTACAGGGTCTaGGCACAACCAAATTCCCTGGAGTCCGGCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CFLLSASEMYRV*AQPNSLESGCS Trigger: AGAGCAGCCGGACTCCAGGGAATTTGGTTGTGCCAAGACCCTGTACATCTCGGACGCCGATAAGAGGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | TACATGGTTTCTGCCTCCACGTCTCCGAACCACACCTaGAGCCCAGCGTGGAAATTTTCTCCGTGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: YMVSASTSPNHT*SPAWKFSPCSS Trigger: GGAGCTGCACGGAGAAAATTTCCACGCTGGGCTCAAGGTGTGGTTCGGAGACGTGGAGGCAGAAACCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | AGCCGGAAGTGCTTCCTCTTATCGGCGTCCGAGATGTACAGGGTCTaGGCACAACCAAATTCCCTGGAGTCCGGCTGCTCTTCAAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRKCFLLSASEMYRV*AQPNSLESGCSSKF Trigger: GAACTTTGAAGAGCAGCCGGACTCCAGGGAATTTGGTTGTGCCAAGACCCTGTACATCTCGGACGCCGATAAGAGGAAGCACTTCCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 90 bp | TGCAGCTGGGATATGGGTTCATCCACATCAAGGAGGGCACACTGCTaGGCCACTTTTCGGATGATCATAGGCGGCAGTGTAATGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSWDMGSSTSRRAHC*ATFRMIIGGSVMPV Trigger: CACAGGCATTACACTGCCGCCTATGATCATCCGAAAAGTGGCCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | GCATGCAGGATCCACACAGTCTGCTCACATCTTTGCTaGAGGCATGTGCGCACACCTTCTCTTAGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: ACRIHTVCSHLC*RHVRTPSLRMM Trigger: CATCATCCTAAGAGAAGGTGTGCGCACATGCCTGCAGCAAAGATGTGAGCAGACTGTGTGGATCCTGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | TTGGCATGCAGGATCCACACAGTCTGCTCACATCTTTaGTGCAGGCATGTGCGCACACCTTCTCTTAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LACRIHTVCSHL*CRHVRTPSLRM Trigger: CATCCTAAGAGAAGGTGTGCGCACATGCCTGCAGCAAAGATGTGAGCAGACTGTGTGGATCCTGCATGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | CCGGAGGAGATGCATAGGTCTGTGTTTTTCAGCGACTaGTTCTTCTGCGAGGGCTTGGAGATCACCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PEEMHRSVFFSD*FFCEGLEITLM Trigger: CATCAAGGTGATCTCCAAGCCCTCGCAGAAGAAGCAGTCGCTGAAAAACACAGACCTATGCATCTCCTCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS GCA 72 bp | TGGGATATGGGTTCATCCACATCAAGGAGGGCACACTaGTTGGCCACTTTTCGGATGATCATAGGCGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WDMGSSTSRRAH*LATFRMIIGGS Trigger: ACTGCCGCCTATGATCATCCGAAAAGTGGCCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CCA 72 bp | TTGGAAACTGGAAGGCACACTTGTGCAGCTGGGATATaGGTTCATCCACATCAAGGAGGGCACACTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LETGRHTCAAGI*VHPHQGGHTAW Trigger: CCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATCCCAGCTGCACAAGTGTGCCTTCCAGTTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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| CDS CAA 72 bp | GATATGGGTTCATCCACATCAAGGAGGGCACACTGCTaGGCCACTTTTCGGATGATCATAGGCGGCAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: DMGSSTSRRAHC*ATFRMIIGGSV Trigger: TACACTGCCGCCTATGATCATCCGAAAAGTGGCCAAGCAGTGTGCCCTCCTTGATGTGGATGAACCCATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017151.2 |
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