Pregenerated sensors for RBPJ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039191Ensembl transcript IDs: ENSMUST00000037618.13, ENSMUST00000087360.9, ENSMUST00000113865.5, ENSMUST00000201883.4, ENSMUST00000201912.4, ENSMUST00000201991.4
Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAGGCAGAGGCGCACAGCCTTCGAACGGCAGTGCTCACTGCCATaGACTCAGAAAGGGCTAAATGGCCACACGGAGCTGTTAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: NRQRRTAFERQCSLP*TQKGLNGHTELLAS Trigger: AGATGCTAACAGCTCCGTGTGGCCATTTAGCCCTTTCTGAGTTCATGGCAGTGAGCACTGCCGTTCGAAGGCTGTGCGCCTCTGCCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | CTAGGACCTCAGAAAGCACAACGGAACTGCAAACTGCTCAGGCTCTaGACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LGPQKAQRNCKLLRL*TDRRGLLPSQLREN Trigger: GTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTTCAGAGCCTGAGCAGTTTGCAGTTCCGTTGTGCTTTCTGAGGTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | GACAGGAAGGCTGTCACCACCACATCTTACAGGTGGCCTTCCCCTTaGCAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGCAGTGGCACT | + |
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Preference number: 1 (lower is better) Translates to: DRKAVTTTSYRWPSP*QAKEEPFKDVRSGT Trigger: AGTGCCACTGCGAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAGATGTGGTGGTGACAGCCTTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | TTCGAGACAGCGAGTGAAAGCAGCAACGCTGGAAAGCAATGGTCCTaGCAGAGGAGTCTAAGGGTCTACGTGAAAACTTTCAGAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: FETASESSNAGKQWS*QRSLRVYVKTFRSP Trigger: TGGGCTTCTGAAAGTTTTCACGTAGACCCTTAGACTCCTCTGTCAGGACCATTGCTTTCCAGCGTTGCTGCTTTCACTCGCTGTCTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | TCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTTTaGATAGATCACCTGGTACGAAACGTTTCCCCAAGAAACCACAAA | + |
|
Preference number: 1 (lower is better) Translates to: SLYCGLCMSHLHWQF*IDHLVRNVSPRNHK Trigger: TTTGTGGTTTCTTGGGGAAACGTTTCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | AGAAAAGAAACAAAACTGTCAAGGTTAAGATGGTGGCAGGAAGAGTaGCAGCAGGTTCTGCTAGTTAACTGTACCCAAGGACACTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: RKETKLSRLRWWQEE*QQVLLVNCTQGHCH Trigger: GTGGCAGTGTCCTTGGGTACAGTTAACTAGCAGAACCTGCTGTCACTCTTCCTGCCACCATCTTAACCTTGACAGTTTTGTTTCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | CACAAGAACCTGGAAGTGTTCAGTGTTCAGACTGAACAAACATGGTaGGGCTCGAACCTGAATGAATGTACTTTAGAGCCAACCCTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: HKNLEVFSVQTEQTW*GSNLNECTLEPTLK Trigger: TTTGAGGGTTGGCTCTAAAGTACATTCATTCAGGTTCGAGCCTCACCATGTTTGTTCAGTCTGAACACTGAACACTTCCAGGTTCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR GCA 90 bp | CCTGCCTTCCAATCTCTTGACAAATTCATGGTGGATCTTGGATTCTaGATTTCGACATGTTTTAAGAAGCTGTGTAGACGCACTGTAAAC | + |
|
Preference number: 1 (lower is better) Translates to: PAFQSLDKFMVDLGF*ISTCFKKLCRRTVN Trigger: GTTTACAGTGCGTCTACACAGCTTCTTAAAACATGTCGAAATGCAGAATCCAAGATCCACCATGAATTTGTCAAGAGATTGGAAGGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR CCA 90 bp | TTCAATTCCCAAGAAACTGAACAAGGAATAACCAAAGTGCAGGGATaGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACA | + |
|
Preference number: 1 (lower is better) Translates to: FNSQETEQGITKVQG*KQNESGILAHRADT Trigger: TGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCCATCCCTGCACTTTGGTTATTCCTTGTTCAGTTTCTTGGGAATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | TATCATGTTTCTAACCATCCATCCCGAGTAACAGTGCTTGAAAAATaGATCAAAGGTGGCACAGAAAACCACACATTTGTTCAGTACTCA | + |
|
Preference number: 1 (lower is better) Translates to: YHVSNHPSRVTVLEK*IKGGTENHTFVQYS Trigger: TGAGTACTGAACAAATGTGTGGTTTTCTGTGCCACCTTTGATTCATTTTTCAAGCACTGTTACTCGGGATGGATGGTTAGAAACATGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR CCA 90 bp | GAAAACCACACATTTGTTCAGTACTCACCAGAAACACAGCTGCTTTaGAAAGCAGTGTCTGTTACCTTGGTTAATAATCAAATAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: ENHTFVQYSPETQLL*KAVSVTLVNNQIAF Trigger: AAATGCTATTTGATTATTAACCAAGGTAACAGACACTGCTTTCCAAAGCAGCTGTGTTTCTGGTGAGTACTGAACAAATGTGTGGTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR TCA 90 bp | AAAGCAGACAGACATATCTGTTCACACTATTCTGTGGTAGGAGTCTaGCATAGAACCATAGCAAAATGCCTTTATTGTTACATTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: KADRHICSHYSVVGV*HRTIAKCLYCYILE Trigger: TTCAAGAATGTAACAATAAAGGCATTTTGCTATGGTTCTATGTCAGACTCCTACCACAGAATAGTGTGAACAGATATGTCTGTCTGCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGAGGTGGCCTTCCCCTTaGCAAGCCAAGGAGGAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQRWPSP*QAKEEP Trigger: CGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCT...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGGGGCGGGGAGGAGGTaGGCTGTAGCTGATCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRGAGRR*AVADLK Trigger: CTTCAGATCAGCTACAGCCCACCTCCTCCCCGCCCC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGGGAAAGCAATGGTCCTaGCAGAGGAGTCTAAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQGKQWS*QRSLRV Trigger: GACCCTTAGACTCCTCTGTCAGGACCATTGCTTTCC...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGAGGTGGCCTTCCCCTTaGCAAGCCAAGGAGGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQRWPSP*QAKEEP Trigger: CGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCT...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCGGCCACAGTGAGCTCTaGCCTGGACCACTGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPGHSEL*PGPLRQ Trigger: CTGTCTCAGTGGTCCAGGGCAGAGCTCACTGTGGCC...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGCAGTGCTCACTGCCATaGACTCAGAAAGGGCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQQCSLP*TQKGLN Trigger: ATTTAGCCCTTTCTGAGTTCATGGCAGTGAGCACTG...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGGTGGGAAACACCCTGTaGAATGTAATCACTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQVGNTL*NVITGN Trigger: GTTCCCAGTGATTACATTTCACAGGGTGTTTCCCAC...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGTGGTGGCAGGAAGAGTaGCAGCAGGTTCTGCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRWWQEE*QQVLLV Trigger: AACTAGCAGAACCTGCTGTCACTCTTCCTGCCACCA...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR GCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCTTGTACTGTGGCCTCTaGATGTCACACCTGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFLYCGL*MSHLHW Trigger: CCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAA...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR CCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGATGAATCTGGCATATTaGCACACAGGGCTGACACAC | + |
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Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQMNLAY*HTGLTH Trigger: GTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCAT...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGCTGACACACAAGCCTaGATGCAAGCAAGGCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFADTQA*MQARLN Trigger: GTTAAGCCTTGCTTGCATTCAGGCTTGTGTGTCAGC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR CCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTTGTTCATTGTACTGTaGCCTCTGCATGTCACACCT | + |
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Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQLFIVL*PLHVTP Trigger: AGGTGTGACATGCAGAGGCCACAGTACAATGAACAA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCTGCACTGGCAGTTTTaGATAGATCACCTGGTACGA | + |
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Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRLHWQF*IDHLVR Trigger: TCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGTTCAGTGTTCAGACTaGACAAACATGGTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRVQCSD*TNMVRL Trigger: GAGCCTCACCATGTTTGTTCAGTCTGAACACTGAAC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCAGTGCTCACTGCCATaGACTCAGAAAGGGCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRQCSLP*TQKGLN Trigger: ATTTAGCCCTTTCTGAGTTCATGGCAGTGAGCACTG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCATCCTGGAACACAGATaGACTGATGAACAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFILEHR*TDEQAE Trigger: CTCTGCCTGTTCATCAGTTCATCTGTGTTCCAGGAT...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGTGGGAAACACCCTGTaGAATGTAATCACTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRVGNTL*NVITGN Trigger: GTTCCCAGTGATTACATTTCACAGGGTGTTTCCCAC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGTGGGAAACACCCTGTaGAATGTAATCACTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFVGNTL*NVITGN Trigger: GTTCCCAGTGATTACATTTCACAGGGTGTTTCCCAC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGGGAAAGCAATGGTCCTaGCAGAGGAGTCTAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQGKQWS*QRSLRV Trigger: GACCCTTAGACTCCTCTGTCAGGACCATTGCTTTCC...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATCAGTAAGGCCACAGTaGGCTCTGCCCTGGACCACT | + |
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Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPASVRPQ*ALPWTT Trigger: AGTGGTCCAGGGCAGAGCTCACTGTGGCCTTACTGA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGTGGTGGCAGGAAGAGTaGCAGCAGGTTCTGCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQWWQEE*QQVLLV Trigger: AACTAGCAGAACCTGCTGTCACTCTTCCTGCCACCA...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAGGCCACAGTGAGCTCTaGCCTGGACCACTGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRGHSEL*PGPLRQ Trigger: CTGTCTCAGTGGTCCAGGGCAGAGCTCACTGTGGCC...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAGCATCCTGCCACACCTaGTACCACAGGACCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRASCHT*YHRTWR Trigger: CCTCCAGGTCCTGTGGTACCAGGTGTGGCAGGATGC...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCCTGCACTGGCAGTTTTaGATAGATCACCTGGTACGA | + |
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Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPLHWQF*IDHLVR Trigger: TCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAG...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCTGTGAGAGGGACAGCTaGAAACCTGGATTTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPCERDS*KPGFPS Trigger: TGATGGAAATCCAGGTTTTCAGCTGTCCCTCTCACA...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGGCTGACACACAAGCCTaGATGCAAGCAAGGCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQADTQA*MQARLN Trigger: GTTAAGCCTTGCTTGCATTCAGGCTTGTGTGTCAGC...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAATTGTACTGTGGCCTCTaGATGTCACACCTGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: GNKMNLAYWHTGLTHKPELYCGL*MSHLHW Trigger: CCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAA...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGGGGGCGGGGAGGAGGTaGGCTGTAGCTGATCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLGAGRR*AVADLK Trigger: CTTCAGATCAGCTACAGCCCACCTCCTCCCCGCCCC...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGGGATGGAAACAAAATaGATCTGGCATATTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFGMETK*IWHIGT Trigger: TGTGCCAATATGCCAGATTCATTTTGTTTCCATCCC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGGGATGGAAACAAAATaGATCTGGCATATTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRGMETK*IWHIGT Trigger: TGTGCCAATATGCCAGATTCATTTTGTTTCCATCCC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGCAATTCCCAAGAAACTaGACAAGGAATAACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQQFPRN*TRNNQS Trigger: ACTTTGGTTATTCCTTGTTCAGTTTCTTGGGAATTG...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCTTGTTCATTGTACTGTaGCCTCTGCATGTCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPLFIVL*PLHVTP Trigger: AGGTGTGACATGCAGAGGCCACAGTACAATGAACAA...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGTTATGTACAAGATTTaGGGGAAGGGGAAACCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFVMYKI*GKGKPE Trigger: TTCAGGTTTCCCCTTCCCCCAAATCTTGTACATAAC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGTTATGTACAAGATTTaGGGGAAGGGGAAACCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRVMYKI*GKGKPE Trigger: TTCAGGTTTCCCCTTCCCCCAAATCTTGTACATAAC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCACCAAAGTGCAGGGATaGAAACAAAATGAATCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFTKVQG*KQNESG Trigger: GCCAGATTCATTTTGTTTCCATCCCTGCACTTTGGT...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR CAA 90 bp | TTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTTaGAATAGATCACCTGGTACGAAACGTTTCCCCAAGAAACCACAA | + |
|
Preference number: 2 (lower is better) Translates to: FIVLWPLHVTPALAV*NRSPGTKRFPKKPQ Trigger: TTGTGGTTTCTTGGGGAAACGTTTCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAAGTTCAGTGTTCAGACTaGACAAACATGGTGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEVQCSD*TNMVRL Trigger: GAGCCTCACCATGTTTGTTCAGTCTGAACACTGAAC...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACAGTGCTCACTGCCATaGACTCAGAAAGGGCTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEQCSLP*TQKGLN Trigger: ATTTAGCCCTTTCTGAGTTCATGGCAGTGAGCACTG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAGGGGAAGGGGAAACCTaGACAAATCCTGGAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRGEGET*TNPGTQ Trigger: CTGTGTTCCAGGATTTGTTCAGGTTTCCCCTTCCCC...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCAGCTGACACACAAGCCTaGATGCAAGCAAGGCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAADTQA*MQARLN Trigger: GTTAAGCCTTGCTTGCATTCAGGCTTGTGTGTCAGC...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGTCAGTAAGGCCACAGTaGGCTCTGCCCTGGACCACT | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLSVRPQ*ALPWTT Trigger: AGTGGTCCAGGGCAGAGCTCACTGTGGCCTTACTGA...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCTGCCTTCCAATCTCTTaGCAAATTCATGGTGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPCLPIS*QIHGGS Trigger: AGATCCACCATGAATTTGTCAAGAGATTGGAAGGCA...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGACTCCCACTAGTGCTTaGCTCTGCAATTGTACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQTPTSA*LCNCTK Trigger: CTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGT...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTGTTCACTTTATCCTTaGCTTTCTCTGTCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NRSQGPASIATEGEQLLQCSLYP*LSLSTF Trigger: AAAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATTTGTACTGTGGCCTCTaGATGTCACACCTGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHLYCGL*MSHLHW Trigger: CCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAA...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGTTGTTCATTGTACTGTaGCCTCTGCATGTCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQLFIVL*PLHVTP Trigger: AGGTGTGACATGCAGAGGCCACAGTACAATGAACAA...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCACCAAAGTGCAGGGATaGAAACAAAATGAATCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPTKVQG*KQNESG Trigger: GCCAGATTCATTTTGTTTCCATCCCTGCACTTTGGT...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCACAGTGGCACTTACAGTaGTACAGTCTTCGAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAQWHLQ*YSLRDS Trigger: GCTGTCTCGAAGACTGTACCACTGTAAGTGCCACTG...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCTCTTGACAAATTCATaGTGGATCTTGGATTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRLLTNS*WILDSA Trigger: TGCAGAATCCAAGATCCACCATGAATTTGTCAAGAG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCAGTTCAGTGTTCAGACTaGACAAACATGGTGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAVQCSD*TNMVRL Trigger: GAGCCTCACCATGTTTGTTCAGTCTGAACACTGAAC...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCACAGTGCTCACTGCCATaGACTCAGAAAGGGCTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAQCSLP*TQKGLN Trigger: ATTTAGCCCTTTCTGAGTTCATGGCAGTGAGCACTG...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAGCTGACACACAAGCCTaGATGCAAGCAAGGCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRADTQA*MQARLN Trigger: GTTAAGCCTTGCTTGCATTCAGGCTTGTGTGTCAGC...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGGGGATGGAAACAAAATaGATCTGGCATATTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQGMETK*IWHIGT Trigger: TGTGCCAATATGCCAGATTCATTTTGTTTCCATCCC...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCAATTCCCAAGAAACTaGACAAGGAATAACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QRLSRMLRGSMGETLVSRQFPRN*TRNNQS Trigger: ACTTTGGTTATTCCTTGTTCAGTTTCTTGGGAATTG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCCAATTCCCAAGAAACTaGACAAGGAATAACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFQFPRN*TRNNQS Trigger: ACTTTGGTTATTCCTTGTTCAGTTTCTTGGGAATTG...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATGGACAGCTGAAAACCTaGATTTCCATCAGCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHGQLKT*ISISLC Trigger: GCACAGGCTGATGGAAATCCAGGTTTTCAGCTGTCC...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCAATGAATCTGGCATATTaGCACACAGGGCTGACACAC | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAMNLAY*HTGLTH Trigger: GTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCAT...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGACCAAAGTGCAGGGATaGAAACAAAATGAATCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQTKVQG*KQNESG Trigger: GCCAGATTCATTTTGTTTCCATCCCTGCACTTTGGT...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCACATTTTCAGGTTTTaGCCTGCCTTCCAATCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQHIFRF*PAFQSL Trigger: AAGAGATTGGAAGGCAGGCCAAAACCTGAAAATGTG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCTGCACTGGCAGTTTTaGATAGATCACCTGGTACGA | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHLHWQF*IDHLVR Trigger: TCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATTGTGAGAGGGACAGCTaGAAACCTGGATTTCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHCERDS*KPGFPS Trigger: TGATGGAAATCCAGGTTTTCAGCTGTCCCTCTCACA...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAATCCTGGAACACAGATaGACTGATGAACAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRILEHR*TDEQAE Trigger: CTCTGCCTGTTCATCAGTTCATCTGTGTTCCAGGAT...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATATCCTGGAACACAGATaGACTGATGAACAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHILEHR*TDEQAE Trigger: CTCTGCCTGTTCATCAGTTCATCTGTGTTCCAGGAT...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGGGGGAAGGGGAAACCTaGACAAATCCTGGAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLGEGET*TNPGTQ Trigger: CTGTGTTCCAGGATTTGTTCAGGTTTCCCCTTCCCC...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATGTGGGAAACACCCTGTaGAATGTAATCACTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHVGNTL*NVITGN Trigger: GTTCCCAGTGATTACATTTCACAGGGTGTTTCCCAC...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGTTGTACTGTGGCCTCTaGATGTCACACCTGCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLLYCGL*MSHLHW Trigger: CCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAA...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCATTTCCATCAGCCTGTaGATTCTGATGTTGTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPISISL*ILMLFI Trigger: AATGAACAACATCAGAATGCACAGGCTGATGGAAAT...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCATAGAAGTTACAGTCTaGATTCATAAGGTACTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFIEVTV*IHKVLV Trigger: CACTAGTACCTTATGAATGCAGACTGTAACTTCTAT...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATGCCTTCCAATCTCTTaGCAAATTCATGGTGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPACLPIS*QIHGGS Trigger: AGATCCACCATGAATTTGTCAAGAGATTGGAAGGCA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCTGTTCACTTTATCCTTaGCTTTCTCTGTCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPCSLYP*LSLSTF Trigger: AAAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACA...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTGTTCACTTTATCCTTaGCTTTCTCTGTCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SDVVHCTVASACHTCTGSCSLYP*LSLSTF Trigger: AAAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACA...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCATAGAAGTTACAGTCTaGATTCATAAGGTACTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPIEVTV*IHKVLV Trigger: CACTAGTACCTTATGAATGCAGACTGTAACTTCTAT...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGGTGGATCTTGGATTCTaGATTTCGACATGTTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TQTSFSNDKSILPHLVPQVDLGF*ISTCFK Trigger: CTTAAAACATGTCGAAATGCAGAATCCAAGATCCAC...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCCACATATCTGTTTCCTaGCCATTAAATCAAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPHISVS*PLNQNQ Trigger: TTGGTTTTGATTTAATGGCCAGGAAACAGATATGTG...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCAGTGGCACTTACAGTaGTACAGTCTTCGAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLQWHLQ*YSLRDS Trigger: GCTGTCTCGAAGACTGTACCACTGTAAGTGCCACTG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGATCCTGGAACACAGATaGACTGATGAACAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLILEHR*TDEQAE Trigger: CTCTGCCTGTTCATCAGTTCATCTGTGTTCCAGGAT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGATGCCTTCCAATCTCTTaGCAAATTCATGGTGGATCT | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRCLPIS*QIHGGS Trigger: AGATCCACCATGAATTTGTCAAGAGATTGGAAGGCA...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGATGAATCTGGCATATTaGCACACAGGGCTGACACAC | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLMNLAY*HTGLTH Trigger: GTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCAT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGACACATTTTCAGGTTTTaGCCTGCCTTCCAATCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRHIFRF*PAFQSL Trigger: AAGAGATTGGAAGGCAGGCCAAAACCTGAAAATGTG...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAACAGTGCTTGAAAAATaGATCAAAGGTGGCACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRTVLEK*IKGGTE Trigger: TTCTGTGCCACCTTTGATTCATTTTTCAAGCACTGT...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGTTGTTCATTGTACTGTaGCCTCTGCATGTCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLLFIVL*PLHVTP Trigger: AGGTGTGACATGCAGAGGCCACAGTACAATGAACAA...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACACATATCTGTTTCCTaGCCATTAAATCAAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEHISVS*PLNQNQ Trigger: TTGGTTTTGATTTAATGGCCAGGAAACAGATATGTG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATTTAAGCTACAAAGCTaGGTAAGGAAGAGTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAFKLQS*VRKSLF Trigger: GAACAAACTCTTCCTTACCCAGCTTTGTAGCTTAAA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAATTCATGGTGGATCTTaGATTCTGCATTTCGACATG | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRIHGGS*ILHFDM Trigger: CATGTCGAAATGCAGAATCCAAGATCCACCATGAAT...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGGGGATGGAAACAAAATaGATCTGGCATATTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLGMETK*IWHIGT Trigger: TGTGCCAATATGCCAGATTCATTTTGTTTCCATCCC...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCAATTCCCAAGAAACTaGACAAGGAATAACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHQFPRN*TRNNQS Trigger: ACTTTGGTTATTCCTTGTTCAGTTTCTTGGGAATTG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATGTTCACTTTATCCTTaGCTTTCTCTGTCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPACSLYP*LSLSTF Trigger: AAAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAATTTCCATCAGCCTGTaGATTCTGATGTTGTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRISISL*ILMLFI Trigger: AATGAACAACATCAGAATGCACAGGCTGATGGAAAT...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCACACATATCTGTTTCCTaGCCATTAAATCAAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: IKQTKSLSKPKALDLTPAHISVS*PLNQNQ Trigger: TTGGTTTTGATTTAATGGCCAGGAAACAGATATGTG...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGACCAAAGTGCAGGGATaGAAACAAAATGAATCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLTKVQG*KQNESG Trigger: GCCAGATTCATTTTGTTTCCATCCCTGCACTTTGGT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATTGTTCACTTTATCCTTaGCTTTCTCTGTCAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QRARKTPENAIEVTVCIHCSLYP*LSLSTF Trigger: AAAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACA...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAAAAATGAATCAAAGGTaGCACAGAAAACCACACATT | + |
|
Preference number: 2 (lower is better) Translates to: RGKLIERQYSSVLKGLSRKMNQR*HRKPHI Trigger: AATGTGTGGTTTTCTGTGCCACCTTTGATTCATTTT...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGATTTCCATCAGCCTGTaGATTCTGATGTTGTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLISISL*ILMLFI Trigger: AATGAACAACATCAGAATGCACAGGCTGATGGAAAT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | AGGCGCACAGCCTTCGAACGGCAGTGCTCACTGCCATaGACTCAGAAAGGGCTAAATGGCCACACGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRTAFERQCSLP*TQKGLNGHTEL Trigger: CAGCTCCGTGTGGCCATTTAGCCCTTTCTGAGTTCATGGCAGTGAGCACTGCCGTTCGAAGGCTGTGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR CCA 72 bp | AATCGGCTAGAACAGCTGGTAAGGAGCAGCCTGGGGTaGACAGGAAGGCTGTCACCACCACATCTTACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NRLEQLVRSSLG*TGRLSPPHLTG Trigger: ACCTGTAAGATGTGGTGGTGACAGCCTTCCTGTCCACCCCAGGCTGCTCCTTACCAGCTGTTCTAGCCGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCAGGTGGCCTTCCCCTaGACAAGCCAAGGAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQTSFSNDKSILPHLVPQQVAFP*TSQGGA Trigger: GGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGGGGAGCGCAACCTGTTaGGTAACAAGGTGTAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: NRSQGPASIATEGEQLLQGSATC*VTRCST Trigger: TGTACTACACCTTGTTACCAAACAGGTTGCGCTCCC...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR GCA 72 bp | GGACACAGACCAGTTTCTCTAATGACAAAAGCATCCTaGCACACCTGGTACCACAGGACCTGGAGGCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GHRPVSLMTKAS*HTWYHRTWRLR Trigger: CCTTAGCCTCCAGGTCCTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCACAGGTGGCCTTCCCCTaGACAAGCCAAGGAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IKQTKSLSKPKALDLTPAQVAFP*TSQGGA Trigger: GGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTG...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | TGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTTTaGATAGATCACCTGGTACGAAACGTTTCCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGLCMSHLHWQF*IDHLVRNVSPR Trigger: TCTTGGGGAAACGTTTCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAGGTGTGACATGCAGAGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | GCGAGTGAAAGCAGCAACGCTGGAAAGCAATGGTCCTaGCAGAGGAGTCTAAGGGTCTACGTGAAAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASESSNAGKQWS*QRSLRVYVKTF Trigger: GAAAGTTTTCACGTAGACCCTTAGACTCCTCTGTCAGGACCATTGCTTTCCAGCGTTGCTGCTTTCACTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCTGTGCATTCTGATGTaGTTCATTGTACTGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRLSRMLRGSMGETLVSRLCILM*FIVLWP Trigger: AGGCCACAGTACAATGAACAACATCAGAATGCACAG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGGGGAGCGCAACCTGTTaGGTAACAAGGTGTAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: TQTSFSNDKSILPHLVPQGSATC*VTRCST Trigger: TGTACTACACCTTGTTACCAAACAGGTTGCGCTCCC...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCAGGTGGCCTTCCCCTaGACAAGCCAAGGAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLQVAFP*TSQGGA Trigger: GGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAAGGGAGCGCAACCTGTTaGGTAACAAGGTGTAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEGSATC*VTRCST Trigger: TGTACTACACCTTGTTACCAAACAGGTTGCGCTCCC...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCTGTGCATTCTGATGTaGTTCATTGTACTGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TQTSFSNDKSILPHLVPQLCILM*FIVLWP Trigger: AGGCCACAGTACAATGAACAACATCAGAATGCACAG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCTTGTTCACTTTATCCTaGCCTTTCTCTGTCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFLFTLS*PFSVNF Trigger: AAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACAA...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGACCTGCACTGGCAGTTTaGAATAGATCACCTGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: RGKLIERQYSSVLKGLSRPALAV*NRSPGT Trigger: CGTACCAGGTGATCTATTCAAAACTGCCAGTGCAGG...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACTGTGCATTCTGATGTaGTTCATTGTACTGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GNKMNLAYWHTGLTHKPELCILM*FIVLWP Trigger: AGGCCACAGTACAATGAACAACATCAGAATGCACAG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATGGGAGCGCAACCTGTTaGGTAACAAGGTGTAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: QRARKTPENAIEVTVCIHGSATC*VTRCST Trigger: TGTACTACACCTTGTTACCAAACAGGTTGCGCTCCC...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCAAATGAATCTGGCATATaGGCACACAGGGCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: IKQTKSLSKPKALDLTPANESGI*AHRADT Trigger: TGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATT...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCCATGGGTGAGACACTaGTCTCAAGGAAAAATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TQTSFSNDKSILPHLVPQPWVRH*SQGKIK Trigger: TTTGATTTTTCCTTGAGACAAGTGTCTCACCCATGG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | ACAAAACTGTCAAGGTTAAGATGGTGGCAGGAAGAGTaGCAGCAGGTTCTGCTAGTTAACTGTACCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TKLSRLRWWQEE*QQVLLVNCTQG Trigger: TCCTTGGGTACAGTTAACTAGCAGAACCTGCTGTCACTCTTCCTGCCACCATCTTAACCTTGACAGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | CTTTTACACAAACCTACGTCTGGACTGACACAGGACTaGACACGAGCAAACATTTATCACAACACAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLHKPTSGLTQD*TRANIYHNTGG Trigger: TCCCCCTGTGTTGTGATAAATGTTTGCTCGTGTTCAGTCCTGTGTCAGTCCAGACGTAGGTTTGTGTAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCTTGTTCACTTTATCCTaGCCTTTCTCTGTCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPLFTLS*PFSVNF Trigger: AAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACAA...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTTGTTCACTTTATCCTaGCCTTTCTCTGTCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SDVVHCTVASACHTCTGSLFTLS*PFSVNF Trigger: AAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACAA...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGAATTCATGGTGGATCTaGGATTCTGCATTTCGACAT | + |
|
Preference number: 3 (lower is better) Translates to: TQTSFSNDKSILPHLVPQNSWWI*DSAFRH Trigger: ATGTCGAAATGCAGAATCCAAGATCCACCATGAATT...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | CTGGAAGTGTTCAGTGTTCAGACTGAACAAACATGGTaGGGCTCGAACCTGAATGAATGTACTTTAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEVFSVQTEQTW*GSNLNECTLEP Trigger: TGGCTCTAAAGTACATTCATTCAGGTTCGAGCCTCACCATGTTTGTTCAGTCTGAACACTGAACACTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGTTGTTCACTTTATCCTaGCCTTTCTCTGTCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQTSFSNDKSILPHLVPQLFTLS*PFSVNF Trigger: AAAGTTGACAGAGAAAGGCAAGGATAAAGTGAACAA...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCTGTGCATTCTGATGTaGTTCATTGTACTGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRARKTPENAIEVTVCIHLCILM*FIVLWP Trigger: AGGCCACAGTACAATGAACAACATCAGAATGCACAG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAAGAAACACAGCTGCTTaGGAAAGCAGTGTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RGKLIERQYSSVLKGLSRRNTAA*ESSVCY Trigger: GTAACAGACACTGCTTTCCAAAGCAGCTGTGTTTCT...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | TGTAGCCCAATGAGTCTGCTTCAATTCCCAAGAAACTaGACAAGGAATAACCAAAGTGCAGGGATGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: CSPMSLLQFPRN*TRNNQSAGMET Trigger: TGTTTCCATCCCTGCACTTTGGTTATTCCTTGTTCAGTTTCTTGGGAATTGAAGCAGACTCATTGGGCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | CTACAACTGAGCTTTTACACAAACCTACGTCTGGACTaGCACAGGACTGAACACGAGCAAACATTTATCACA | + |
|
Preference number: 3 (lower is better) Translates to: LQLSFYTNLRLD*HRTEHEQTFIT Trigger: TGTGATAAATGTTTGCTCGTGTTCAGTCCTGTGTCAGTCCAGACGTAGGTTTGTGTAAAAGCTCAGTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGAATGAATCTGGCATATaGGCACACAGGGCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLNESGI*AHRADT Trigger: TGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR GCA 72 bp | ACCACACATTTGTTCAGTACTCACCAGAAACACAGCTaGTTTGGAAAGCAGTGTCTGTTACCTTGGTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TTHLFSTHQKHS*FGKQCLLPWLI Trigger: TATTAACCAAGGTAACAGACACTGCTTTCCAAAGCAGCTGTGTTTCTGGTGAGTACTGAACAAATGTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR CCA 72 bp | GGTTTTGGCCTGCCTTCCAATCTCTTGACAAATTCATaGTGGATCTTGGATTCTGCATTTCGACATGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GFGLPSNLLTNS*WILDSAFRHVL Trigger: TAAAACATGTCGAAATGCAGAATCCAAGATCCACCATGAATTTGTCAAGAGATTGGAAGGCAGGCCAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCTGTGCATTCTGATGTaGTTCATTGTACTGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLLCILM*FIVLWP Trigger: AGGCCACAGTACAATGAACAACATCAGAATGCACAG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR CCA 72 bp | TTTGGCCTGCCTTCCAATCTCTTGACAAATTCATGGTaGATCTTGGATTCTGCATTTCGACATGTTTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FGLPSNLLTNSW*ILDSAFRHVLR Trigger: TCTTAAAACATGTCGAAATGCAGAATCCAAGATCCACCATGAATTTGTCAAGAGATTGGAAGGCAGGCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR CCA 72 bp | ACATTTGTTCAGTACTCACCAGAAACACAGCTGCTTTaGAAAGCAGTGTCTGTTACCTTGGTTAATAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: TFVQYSPETQLL*KAVSVTLVNNQ Trigger: TTGATTATTAACCAAGGTAACAGACACTGCTTTCCAAAGCAGCTGTGTTTCTGGTGAGTACTGAACAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR TCA 72 bp | AGACATATCTGTTCACACTATTCTGTGGTAGGAGTCTaGCATAGAACCATAGCAAAATGCCTTTATTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RHICSHYSVVGV*HRTIAKCLYCY Trigger: GTAACAATAAAGGCATTTTGCTATGGTTCTATGTCAGACTCCTACCACAGAATAGTGTGAACAGATATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTGCAGCGCTGCAGTGTaGCCTCGGCCCTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQCSAAV*PRPWLW Trigger: CCAGAGCCAGGGCCGAGGCCACACTGCAGCGCTGCA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGAAACTTCCCCGCCGATaGAGCATGCGCAGGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQKLPRR*SMRRPL Trigger: GAGCGGCCTGCGCATGCTCCATCGGCGGGGAAGTTT...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR GCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACCCGCCGATGGAGCATaGGCAGGCCGCTCCTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEPADGA*AGRSSA Trigger: CGCGGAGGAGCGGCCTGCGCATGCTCCATCGGCGGG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR CCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTCGGACCAAAGTCACTaGAACCTGGACTGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQSDQSH*NLDWLA Trigger: CGCCAGCCAGTCCAGGTTCCAGTGACTTTGGTCCGA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGGGCTGGTGGAGTAAATaGCCCCGTCATTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQGWWSK*PRHFGP Trigger: TGGTCCGAAATGACGGGGTCATTTACTCCACCAGCC...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCGGTTATCCGGGTTTTaGGACGCGCCCTCGGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSFSNDKSILPHLVPQRLSGF*DAPSGT Trigger: CGTCCCCGAGGGCGCGTCCCAAAACCCGGATAACCG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCCTCCGAGTAGTCCATaGGGAGCGCTCCGGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLSRMLRGSMGETLVSRPPSSP*GALRLS Trigger: GGATAACCGGAGCGCTCCCCATGGACTACTCGGAGG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGGAACCTGGACTGGCTaGCGGACCCATCTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLSRMLRGSMGETLVSRGTWTG*RTHLQP Trigger: AGGTTGGAGATGGGTCCGCCAGCCAGTCCAGGTTCC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGGAACCTGGACTGGCTaGCGGACCCATCTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFGTWTG*RTHLQP Trigger: AGGTTGGAGATGGGTCCGCCAGCCAGTCCAGGTTCC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCCACTGGAACCTGGACTaGCTGGCGGACCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFHWNLD*LADPSP Trigger: TGGAGATGGGTCCGCCAGCCAGTCCAGGTTCCAGTG...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGCCAACCTTCCCGGAATaGAGAAATGTCTGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQPTFPE*RNVWDH Trigger: GTGGTCCCAGACATTTCTGCATTCCGGGAAGGTTGG...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCGGAACCTGGACTGGCTaGCGGACCCATCTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPGTWTG*RTHLQP Trigger: AGGTTGGAGATGGGTCCGCCAGCCAGTCCAGGTTCC...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCCACTGGAACCTGGACTaGCTGGCGGACCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPHWNLD*LADPSP Trigger: TGGAGATGGGTCCGCCAGCCAGTCCAGGTTCCAGTG...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCTCGGACCAAAGTCACTaGAACCTGGACTGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFSDQSH*NLDWLA Trigger: CGCCAGCCAGTCCAGGTTCCAGTGACTTTGGTCCGA...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATGCAGCGCTGCAGTGTaGCCTCGGCCCTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKQTKSLSKPKALDLTPACSAAV*PRPWLW Trigger: CCAGAGCCAGGGCCGAGGCCACACTGCAGCGCTGCA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTCATTGGAGGGCACTTaGCTGGAGTTGGCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQSLEGT*LELALR Trigger: TCTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGGGCTGGTGGAGTAAATaGCCCCGTCATTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLSRMLRGSMGETLVSRGWWSK*PRHFGP Trigger: TGGTCCGAAATGACGGGGTCATTTACTCCACCAGCC...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGGCTGGTGGAGTAAATaGCCCCGTCATTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFGWWSK*PRHFGP Trigger: TGGTCCGAAATGACGGGGTCATTTACTCCACCAGCC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGGGAACCTGGACTGGCTaGCGGACCCATCTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSFSNDKSILPHLVPQGTWTG*RTHLQP Trigger: AGGTTGGAGATGGGTCCGCCAGCCAGTCCAGGTTCC...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGATGCAGCGCTGCAGTGTaGCCTCGGCCCTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKLIERQYSSVLKGLSRCSAAV*PRPWLW Trigger: CCAGAGCCAGGGCCGAGGCCACACTGCAGCGCTGCA...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCCTGAGCACACAAGCTTaGCAGTCTGCCCGTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFLSTQA*QSARNG Trigger: TCCATTACGGGCAGACTGTCAAGCTTGTGTGCTCAG...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCCCAACCTTCCCGGAATaGAGAAATGTCTGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFPTFPE*RNVWDH Trigger: GTGGTCCCAGACATTTCTGCATTCCGGGAAGGTTGG...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCAGTGAGTCGTTTGGGTaGAGGCCGCTCACCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFSESFG*RPLTKL Trigger: AAGTTTGGTGAGCGGCCTCCACCCAAACGACTCACT...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACACTGGAACCTGGACTaGCTGGCGGACCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEHWNLD*LADPSP Trigger: TGGAGATGGGTCCGCCAGCCAGTCCAGGTTCCAGTG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCGGACCACACAGAGCATaGTCTCTCCACATCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFGPHRA*SLHICT Trigger: TGTACAGATGTGGAGAGAGCATGCTCTGTGTGGTCC...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGTGCAGCGCTGCAGTGTaGCCTCGGCCCTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLCSAAV*PRPWLW Trigger: CCAGAGCCAGGGCCGAGGCCACACTGCAGCGCTGCA...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR CAA 72 bp | CTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTTaGAATAGATCACCTGGTACGAAACGTTTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLHVTPALAV*NRSPGTKRFPK Trigger: CTTGGGGAAACGTTTCGTACCAGGTGATCTATTCAAAACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTACCCGACTGCTCTTCTaGAGGTCAGGAGTTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SDVVHCTVASACHTCTGSTRLLF*RSGVQI Trigger: GATTTGAACTCCTGACCTTCAGAAGAGCAGTCGGGT...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCACCTCGGGGACGTACGTaGAGACTGAGGAAAACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKQTKSLSKPKALDLTPAPRGRT*RLRKTG Trigger: TCCGGTTTTCCTCAGTCTCCACGTACGTCCCCGAGG...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATGGAACCTGGACTGGCTaGCGGACCCATCTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHGTWTG*RTHLQP Trigger: AGGTTGGAGATGGGTCCGCCAGCCAGTCCAGGTTCC...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGTCATTGGAGGGCACTTaGCTGGAGTTGGCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQTSFSNDKSILPHLVPQSLEGT*LELALR Trigger: TCTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGA...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCAGGCTGGTGGAGTAAATaGCCCCGTCATTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IKQTKSLSKPKALDLTPAGWWSK*PRHFGP Trigger: TGGTCCGAAATGACGGGGTCATTTACTCCACCAGCC...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGCTTCTGTGCAACTTTTaGATGAAGAATGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRSQGPASIATEGEQLLQLLCNF*MKNEHC Trigger: ACAGTGCTCATTCTTCATGCAAAAGTTGCACAGAAG...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACCAACCTTCCCGGAATaGAGAAATGTCTGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEPTFPE*RNVWDH Trigger: GTGGTCCCAGACATTTCTGCATTCCGGGAAGGTTGG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGATCGGACCAAAGTCACTaGAACCTGGACTGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGKLIERQYSSVLKGLSRSDQSH*NLDWLA Trigger: CGCCAGCCAGTCCAGGTTCCAGTGACTTTGGTCCGA...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAATCATTGGAGGGCACTTaGCTGGAGTTGGCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPESLEGT*LELALR Trigger: TCTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGA...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTTGTGTTTGACTCATTaGAGGGCACTTGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDVVHCTVASACHTCTGSLCLTH*RALGWS Trigger: ACTCCAGCCAAGTGCCCTCCAATGAGTCAAACACAA...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCCTTTATCCGCTTGCTaGGGAACACACCAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSFSNDKSILPHLVPQPLSAC*GTHQCH Trigger: ATGACATTGGTGTGTTCCTCAGCAAGCGGATAAAGG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATGGCTGGTGGAGTAAATaGCCCCGTCATTTCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHGWWSK*PRHFGP Trigger: TGGTCCGAAATGACGGGGTCATTTACTCCACCAGCC...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCACCAACCTTCCCGGAATaGAGAAATGTCTGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKQTKSLSKPKALDLTPAPTFPE*RNVWDH Trigger: GTGGTCCCAGACATTTCTGCATTCCGGGAAGGTTGG...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTGTTGTGAACTGGCGTaGAAATTCCCTCCTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SDVVHCTVASACHTCTGSCCELA*KFPPST Trigger: TGTAGAAGGAGGGAATTTCCACGCCAGTTCACAACA...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCACTGGAACCTGGACTaGCTGGCGGACCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLHWNLD*LADPSP Trigger: TGGAGATGGGTCCGCCAGCCAGTCCAGGTTCCAGTG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACCTTTATCCGCTTGCTaGGGAACACACCAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEPLSAC*GTHQCH Trigger: ATGACATTGGTGTGTTCCTCAGCAAGCGGATAAAGG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCCTTCTGTGCAACTTTTaGATGAAGAATGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFLLCNF*MKNEHC Trigger: ACAGTGCTCATTCTTCATGCAAAAGTTGCACAGAAG...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGCAATGTCATCGCTGTTaGCATAGAACATCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLSRMLRGSMGETLVSRQCHRC*HRTSLQ Trigger: CTGTAAAGATGTTCTATGGCAACAGCGATGACATTG...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGTGTTGTGAACTGGCGTaGAAATTCCCTCCTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TQTSFSNDKSILPHLVPQCCELA*KFPPST Trigger: TGTAGAAGGAGGGAATTTCCACGCCAGTTCACAACA...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGTCGGACCAAAGTCACTaGAACCTGGACTGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLSDQSH*NLDWLA Trigger: CGCCAGCCAGTCCAGGTTCCAGTGACTTTGGTCCGA...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGATCATTGGAGGGCACTTaGCTGGAGTTGGCTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKLIERQYSSVLKGLSRSLEGT*LELALR Trigger: TCTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGA...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCCAATGTCATCGCTGTTaGCATAGAACATCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPQCHRC*HRTSLQ Trigger: CTGTAAAGATGTTCTATGGCAACAGCGATGACATTG...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATGGACCACACAGAGCATaGTCTCTCCACATCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHGPHRA*SLHICT Trigger: TGTACAGATGTGGAGAGAGCATGCTCTGTGTGGTCC...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAATGTTGTGAACTGGCGTaGAAATTCCCTCCTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPECCELA*KFPPST Trigger: TGTAGAAGGAGGGAATTTCCACGCCAGTTCACAACA...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATTGTGTTTGACTCATTaGAGGGCACTTGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKQTKSLSKPKALDLTPALCLTH*RALGWS Trigger: ACTCCAGCCAAGTGCCCTCCAATGAGTCAAACACAA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR CAA 72 bp | AAAACCTGGATTTCCATCAGCCTGTGCATTCTGATGTaGTTCATTGTACTGTGGCCTCTGCATGTCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: KTWISISLCILM*FIVLWPLHVTP Trigger: AGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGAATGCACAGGCTGATGGAAATCCAGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCCTTTATCCGCTTGCTaGGGAACACACCAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHPLSAC*GTHQCH Trigger: ATGACATTGGTGTGTTCCTCAGCAAGCGGATAAAGG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCAATGTCATCGCTGTTaGCATAGAACATCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSFSNDKSILPHLVPQQCHRC*HRTSLQ Trigger: CTGTAAAGATGTTCTATGGCAACAGCGATGACATTG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCCAACCTTCCCGGAATaGAGAAATGTCTGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLPTFPE*RNVWDH Trigger: GTGGTCCCAGACATTTCTGCATTCCGGGAAGGTTGG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATTTGTGTTTGACTCATTaGAGGGCACTTGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHLCLTH*RALGWS Trigger: ACTCCAGCCAAGTGCCCTCCAATGAGTCAAACACAA...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAACAATGTCATCGCTGTTaGCATAGAACATCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEQCHRC*HRTSLQ Trigger: CTGTAAAGATGTTCTATGGCAACAGCGATGACATTG...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGGGACCACACAGAGCATaGTCTCTCCACATCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLGPHRA*SLHICT Trigger: TGTACAGATGTGGAGAGAGCATGCTCTGTGTGGTCC...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR CAA 72 bp | CCCACATTTTCAGGTTTTGGCCTGCCTTCCAATCTCTaGACAAATTCATGGTGGATCTTGGATTCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PTFSGFGLPSNL*TNSWWILDSAF Trigger: AAATGCAGAATCCAAGATCCACCATGAATTTGTCAAGAGATTGGAAGGCAGGCCAAAACCTGAAAATGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR TCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCCTTTATCCGCTTGCTaGGGAACACACCAATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLPLSAC*GTHQCH Trigger: ATGACATTGGTGTGTTCCTCAGCAAGCGGATAAAGG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCTTCTGTGCAACTTTTaGATGAAGAATGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHLLCNF*MKNEHC Trigger: ACAGTGCTCATTCTTCATGCAAAAGTTGCACAGAAG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGACTTCTGTGCAACTTTTaGATGAAGAATGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGKLIERQYSSVLKGLSRLLCNF*MKNEHC Trigger: ACAGTGCTCATTCTTCATGCAAAAGTTGCACAGAAG...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCAATGTCATCGCTGTTaGCATAGAACATCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRARKTPENAIEVTVCIHQCHRC*HRTSLQ Trigger: CTGTAAAGATGTTCTATGGCAACAGCGATGACATTG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CCA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGTGTTGTGAACTGGCGTaGAAATTCCCTCCTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLCCELA*KFPPST Trigger: TGTAGAAGGAGGGAATTTCCACGCCAGTTCACAACA...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| 3UTR CAA 72 bp | CTGCCTTCCAATCTCTTGACAAATTCATGGTGGATCTaGGATTCTGCATTTCGACATGTTTTAAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSNLLTNSWWI*DSAFRHVLRSC Trigger: ACAGCTTCTTAAAACATGTCGAAATGCAGAATCCAAGATCCACCATGAATTTGTCAAGAGATTGGAAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| 3UTR CAA 72 bp | ACAGTAACGGGGGACAAGACTCCTGTACATCATATATaGAAATTGATTTACAAATTCACAAAAGAGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVTGDKTPVHHI*KLIYKFTKEDF Trigger: AAAGTCCTCTTTTGTGAATTTGTAAATCAATTTCAATATATGATGTACAGGAGTCTTGTCCCCCGTTACTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS CCA 90 bp | CATGCGCAGGCCGCTCCTCCGCGGACAAGCCCTCCGAGTAGTCCATaGGGAGCGCTCCGGTTATCCGGGTTTTGGGACGCGCCCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HAQAAPPRTSPPSSP*GALRLSGFWDAPSG Trigger: CCCCGAGGGCGCGTCCCAAAACCCGGATAACCGGAGCGCTCCCCATGGACTACTCGGAGGGCTTGTCCGCGGAGGAGCGGCCTGCGCATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTCCGGTTATCCGGGTTTaGGGACGCGCCCTCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SDVVHCTVASACHTCTGSPVIRV*GRALGD Trigger: GTCCCCGAGGGCGCGTCCCAAAACCCGGATAACCGG...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
||
| CDS-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTCCCTAGTGAGTCGTTaGGGTGGAGGCCGCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NRSQGPASIATEGEQLLQSLVSR*GGGRSP Trigger: TGGTGAGCGGCCTCCACCCAAACGACTCACTAGGGA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS CCA 90 bp | GGGTGGAGGCCGCTCACCAAACTTCGGGCTGGTGAGATGGCTCAATaGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCAGGAGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GWRPLTKLRAGEMAQ*VRAPDCSSEGQEFK Trigger: TTTGAACTCCTGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCGAAGTTTGGTGAGCGGCCTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGCTCATTGGAGGGCACTaGGCTGGAGTTGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NRSQGPASIATEGEQLLQLIGGH*AGVGSE Trigger: CTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAG...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGTCCCTAGTGAGTCGTTaGGGTGGAGGCCGCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QRLSRMLRGSMGETLVSRSLVSR*GGGRSP Trigger: TGGTGAGCGGCCTCCACCCAAACGACTCACTAGGGA...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTTCCCTAGTGAGTCGTTaGGGTGGAGGCCGCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SDVVHCTVASACHTCTGSSLVSR*GGGRSP Trigger: TGGTGAGCGGCCTCCACCCAAACGACTCACTAGGGA...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTGGCACTTGGCTGGAGTaGGCTCTGAGAATCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDVVHCTVASACHTCTGSGTWLE*ALRIAP Trigger: AGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCC...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTCTCATTGGAGGGCACTaGGCTGGAGTTGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDVVHCTVASACHTCTGSLIGGH*AGVGSE Trigger: CTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAG...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGATGACCTTTATCCGCTaGCTGAGGAACACACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: NRSQGPASIATEGEQLLQMTFIR*LRNTPM Trigger: CATTGGTGTGTTCCTCAGCAAGCGGATAAAGGTCAT...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGAACGTGTACTCGGCCTaGTCTGTGCTAATGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRSQGPASIATEGEQLLQNVYSA*SVLMIV Trigger: GACAATCATTAGCACAGACAAGGCCGAGTACACGTT...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGCTCATTGGAGGGCACTaGGCTGGAGTTGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQTSFSNDKSILPHLVPQLIGGH*AGVGSE Trigger: CTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAG...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGAATTCCCCTCGCTGTTaGTGTTTGACTCATTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRSQGPASIATEGEQLLQNSPRC*CLTHWR Trigger: CCTCCAATGAGTCAAACACAAACAGCGAGGGGAATT...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AACAGATCGCAGGGGCCTGCTTCCATCGCAACTGAGGGAGAACAGTTACTGCAGTTCTTTTTGGAGGGTTaGGAGATGACCTTTATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NRSQGPASIATEGEQLLQFFLEG*EMTFIR Trigger: GCGGATAAAGGTCATCTCCAAACCCTCCAAAAAGAA...CTGCAGTAACTGTTCTCCCTCAGTTGCGATGGAAGCAGGCCCCTGCGATCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAAGGCACTTGGCTGGAGTaGGCTCTGAGAATCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEGTWLE*ALRIAP Trigger: AGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCC...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCATGACCTTTATCCGCTaGCTGAGGAACACACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFMTFIR*LRNTPM Trigger: CATTGGTGTGTTCCTCAGCAAGCGGATAAAGGTCAT...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | CTTACAGGTGGCCTTCCCCTTGACAAGCCAAGGAGGAGCCGTTTAAAGATGTTCAACGTGTACTCGGCCTaGTCTGTGCTAATGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTGGLPLDKPRRSRLKMFNVYSA*SVLMIV Trigger: GACAATCATTAGCACAGACAAGGCCGAGTACACGTT...GAACATCTTTAAACGGCTCCTCCTTGGCTTGTCAAGGGGAAGGCCACCTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCAGGCACTTGGCTGGAGTaGGCTCTGAGAATCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IKQTKSLSKPKALDLTPAGTWLE*ALRIAP Trigger: AGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCC...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | CAGAGACTTTCAAGAATGCTGAGGGGCTCCATGGGTGAGACACTTGTCTCAAGGTTCTTTTTGGAGGGTTaGGAGATGACCTTTATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLSRMLRGSMGETLVSRFFLEG*EMTFIR Trigger: GCGGATAAAGGTCATCTCCAAACCCTCCAAAAAGAA...CCTTGAGACAAGTGTCTCACCCATGGAGCCCCTCAGCATTCTTGAAAGTCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAAATTAATAGAAAGGCAATACAGCTCGGTCCTGAAAGGGTTAAGTAGAGGCACTTGGCTGGAGTaGGCTCTGAGAATCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGKLIERQYSSVLKGLSRGTWLE*ALRIAP Trigger: AGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCC...TCTACTTAACCCTTTCAGGACCGAGCTGTATTGCCTTTCTATTAATTTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATCTCATTGGAGGGCACTaGGCTGGAGTTGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRARKTPENAIEVTVCIHLIGGH*AGVGSE Trigger: CTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAG...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTTCAAACTCCCACTAGTGCTTGACTCTGCAATTGTACAAAGGGCACCCAATTCCCCTCGCTGTTaGTGTTTGACTCATTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQFKLPLVLDSAIVQRAPNSPRC*CLTHWR Trigger: CCTCCAATGAGTCAAACACAAACAGCGAGGGGAATT...GGGTGCCCTTTGTACAATTGCAGAGTCAAGCACTAGTGGGAGTTTGAACTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | TCTGATGTTGTTCATTGTACTGTGGCCTCTGCATGTCACACCTGCACTGGCAGTAATTCCCCTCGCTGTTaGTGTTTGACTCATTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDVVHCTVASACHTCTGSNSPRC*CLTHWR Trigger: CCTCCAATGAGTCAAACACAAACAGCGAGGGGAATT...ACTGCCAGTGCAGGTGTGACATGCAGAGGCCACAGTACAATGAACAACATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | ACACAGACCAGTTTCTCTAATGACAAAAGCATCCTGCCACACCTGGTACCACAGAACGTGTACTCGGCCTaGTCTGTGCTAATGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQTSFSNDKSILPHLVPQNVYSA*SVLMIV Trigger: GACAATCATTAGCACAGACAAGGCCGAGTACACGTT...CTGTGGTACCAGGTGTGGCAGGATGCTTTTGTCATTAGAGAAACTGGTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
||
| CDS-3UTR CAA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAAATGACCTTTATCCGCTaGCTGAGGAACACACCAATG | + |
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Preference number: 5 (lower is better) Translates to: GNKMNLAYWHTGLTHKPEMTFIR*LRNTPM Trigger: CATTGGTGTGTTCCTCAGCAAGCGGATAAAGGTCAT...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGGGCACTTGGCTGGAGTaGGCTCTGAGAATCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLGTWLE*ALRIAP Trigger: AGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCC...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGCTCATTGGAGGGCACTaGGCTGGAGTTGGCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLLIGGH*AGVGSE Trigger: CTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAG...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | GGAAACAAAATGAATCTGGCATATTGGCACACAGGGCTGACACACAAGCCTGAAAATTCCCCTCGCTGTTaGTGTTTGACTCATTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GNKMNLAYWHTGLTHKPENSPRC*CLTHWR Trigger: CCTCCAATGAGTCAAACACAAACAGCGAGGGGAATT...TTCAGGCTTGTGTGTCAGCCCTGTGTGCCAATATGCCAGATTCATTTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATACAGGGTTGAGACTCTaGTTCAGAACATCCATCTCG | + |
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Preference number: 5 (lower is better) Translates to: QRARKTPENAIEVTVCIHTGLRL*FRTSIS Trigger: CGAGATGGATGTTCTGAACAAGAGTCTCAACCCTGT...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | ATCAAACAAACAAAAAGCCTTAGCAAGCCTAAGGCTCTGGATTTGACCCCAGCATTCTTTTTGGAGGGTTaGGAGATGACCTTTATCCGC | + |
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Preference number: 5 (lower is better) Translates to: IKQTKSLSKPKALDLTPAFFLEG*EMTFIR Trigger: GCGGATAAAGGTCATCTCCAAACCCTCCAAAAAGAA...TGCTGGGGTCAAATCCAGAGCCTTAGGCTTGCTAAGGCTTTTTGTTTGTTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATAACGTGTACTCGGCCTaGTCTGTGCTAATGATTGTC | + |
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Preference number: 5 (lower is better) Translates to: QRARKTPENAIEVTVCIHNVYSA*SVLMIV Trigger: GACAATCATTAGCACAGACAAGGCCGAGTACACGTT...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | CAGAGAGCCAGAAAGACACCAGAAAATGCCATAGAAGTTACAGTCTGCATTCATTTCTTTTTGGAGGGTTaGGAGATGACCTTTATCCGC | + |
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Preference number: 5 (lower is better) Translates to: QRARKTPENAIEVTVCIHFFLEG*EMTFIR Trigger: GCGGATAAAGGTCATCTCCAAACCCTCCAAAAAGAA...ATGAATGCAGACTGTAACTTCTATGGCATTTTCTGGTGTCTTTCTGGCTCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGATGACCTTTATCCGCTaGCTGAGGAACACACCAATG | + |
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Preference number: 5 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLMTFIR*LRNTPM Trigger: CATTGGTGTGTTCCTCAGCAAGCGGATAAAGGTCAT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS-3UTR CAA 90 bp | GCCATGAACTTGAAAACTTACTTTAAGCTACAAAGCTGGGTAAGGAAGAGTTTGAACGTGTACTCGGCCTaGTCTGTGCTAATGATTGTC | + |
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Preference number: 5 (lower is better) Translates to: AMNLKTYFKLQSWVRKSLNVYSA*SVLMIV Trigger: GACAATCATTAGCACAGACAAGGCCGAGTACACGTT...CAAACTCTTCCTTACCCAGCTTTGTAGCTTAAAGTAAGTTTTCAAGTTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS GCA 72 bp | GGAGGCCGCTCACCAAACTTCCCCGCCGATGGAGCATaGGCAGGCCGCTCCTCCGCGGACAAGCCCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GGRSPNFPADGA*AGRSSADKPSE Trigger: CTCGGAGGGCTTGTCCGCGGAGGAGCGGCCTGCGCATGCTCCATCGGCGGGGAAGTTTGGTGAGCGGCCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
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| CDS CCA 72 bp | GCCGCTCCTCCGCGGACAAGCCCTCCGAGTAGTCCATaGGGAGCGCTCCGGTTATCCGGGTTTTGGGACGCG | + |
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Preference number: 6 (lower is better) Translates to: AAPPRTSPPSSP*GALRLSGFWDA Trigger: CGCGTCCCAAAACCCGGATAACCGGAGCGCTCCCCATGGACTACTCGGAGGGCTTGTCCGCGGAGGAGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037618.13 |
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| CDS TCA 72 bp | TTGACTCATTGGAGGGCACTTGGCTGGAGTTGGCTCTaGGAATCGCTCCTGCAGCGCTGCAGTGTGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LTHWRALGWSWL*ESLLQRCSVAS Trigger: CGAGGCCACACTGCAGCGCTGCAGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS CCA 72 bp | CCGCTCACCAAACTTCGGGCTGGTGAGATGGCTCAATaGGTAAGAGCACCCGACTGCTCTTCTGAAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLTKLRAGEMAQ*VRAPDCSSEGQ Trigger: CTGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCGAAGTTTGGTGAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201912.4 |
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| CDS CAA 72 bp | TTTGTGTTTGACTCATTGGAGGGCACTTGGCTGGAGTaGGCTCTGAGAATCGCTCCTGCAGCGCTGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FVFDSLEGTWLE*ALRIAPAALQC Trigger: ACACTGCAGCGCTGCAGGAGCGATTCTCAGAGCCAACTCCAGCCAAGTGCCCTCCAATGAGTCAAACACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 |
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| CDS CAA 72 bp | GTTTCCTATTCCAATAAACGCACAGGGTTGAGACTCTaGTTCAGAACATCCATCTCGTTCCATTTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSYSNKRTGLRL*FRTSISFHLLF Trigger: AAAGAGCAAATGGAACGAGATGGATGTTCTGAACAAGAGTCTCAACCCTGTGCGTTTATTGGAATAGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037618.13 ENSMUST00000087360.9 ENSMUST00000113865.5 ENSMUST00000201883.4 ENSMUST00000201912.4 ENSMUST00000201991.4 |
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