Pregenerated sensors for RBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041534Ensembl transcript IDs: ENSMUST00000035695.10
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATaGCAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGG | + |
Preference number: 1 (lower is better) Translates to: LPFTCGVYTFELCST*QGLAREAMTTGLWG Trigger: CCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR TCA 90 bp | TTGAAGGGTGCCCCATGGACTCCCTGGAGTCTTGGTGGGTATTCGTaGGAGTCTTTGATGTGGGGCTGTGTTATCTTTGGAGAGCTTTGC | + |
Preference number: 1 (lower is better) Translates to: LKGAPWTPWSLGGYS*ESLMWGCVIFGELC Trigger: GCAAAGCTCTCCAAAGATAACACAGCCCCACATCAAAGACTCTCACGAATACCCACCAAGACTCCAGGGAGTCCATGGGGCACCCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR TCA 90 bp | CCCCATGGACTCCCTGGAGTCTTGGTGGGTATTCGTGAGAGTCTTTaGTGTGGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTA | + |
Preference number: 1 (lower is better) Translates to: PHGLPGVLVGIRESL*CGAVLSLESFATLL Trigger: TAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCCACATCAAAGACTCTCACGAATACCCACCAAGACTCCAGGGAGTCCATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CCA 90 bp | TTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCATCCTaGAATATTCACAAGAGGACTGTGGATATAGAAAGTCAGATACAT | + |
Preference number: 1 (lower is better) Translates to: LEDHTEAGYGPPLSS*NIHKRTVDIESQIH Trigger: ATGTATCTGACTTTCTATATCCACAGTCCTCTTGTGAATATTCCAGGATGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR GCA 90 bp | TGTGGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGGTGGCCCAGAGAGCCTaGCACCACAGCTCTGGCCGT | + |
Preference number: 2 (lower is better) Translates to: CGAVLSLESFATLLGPEQVAQRA*HHSSGR Trigger: ACGGCCAGAGCTGTGGTGGCAGGCTCTCTGGGCCAC...CTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CCA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGGGGATGCCTTTGAGATaGCTGAGCTCCCACTTTTTG | + |
Preference number: 2 (lower is better) Translates to: GRAPNLRSHELKVPTEYQGMPLR*LSSHFL Trigger: CAAAAAGTGGGAGCTCAGCCATCTCAAAGGCATCCC...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CCA 90 bp | TGTGGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGCTCTTGGAGACAGTATaGGGACAGGAGACAGGCAGC | + |
Preference number: 2 (lower is better) Translates to: CGAVLSLESFATLLGPEQLLETV*GQETGS Trigger: GCTGCCTGTCTCCTGTCCCCATACTGTCTCCAAGAG...CTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | CATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACAAGGCTTGGGCTGAAGGTCCCCACTaGGTACCAGAAACACACAGA | + |
Preference number: 2 (lower is better) Translates to: HSHVVSTHSSCVAHDKAWAEGPH*VPETHR Trigger: TCTGTGTGTTTCTGGTACTCAGTGGGGACCTTCAGC...CCAAGCCTTGTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGTCAGAAGCCATGAGCTaGAGGTCCCCACTGAGTACC | + |
Preference number: 2 (lower is better) Translates to: VDLCPITLPFTCGVYTFESEAMS*RSPLST Trigger: GGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGA...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | CCTGGTCTGCATAGAGTCTATATAGGGTCAGTTGAAGGGTGCCCCATGGACTCCATTCGTGAGAGTCTTTaGTGTGGGGCTGTGTTATCT | + |
Preference number: 2 (lower is better) Translates to: PGLHRVYIGSVEGCPMDSIRESL*CGAVLS Trigger: AGATAACACAGCCCCACATCAAAGACTCTCACGAAT...GGAGTCCATGGGGCACCCTTCAACTGACCCTATATAGACTCTATGCAGACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | ATGACAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGTGCTTTCTGAAAAGGTaGCTACTAGAAAAAGCAAAC | + |
Preference number: 2 (lower is better) Translates to: MTRLGKGSNDNRAVGEDGCFLKR*LLEKAN Trigger: GTTTGCTTTTTCTAGTAGTCACCTTTTCAGAAAGCA...CCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CCA 90 bp | CCTGGTCTGCATAGAGTCTATATAGGGTCAGTTGAAGGGTGCCCCATGGACTCCCCACCATTGTCATCCTaGAATATTCACAAGAGGACT | + |
Preference number: 2 (lower is better) Translates to: PGLHRVYIGSVEGCPMDSPPLSS*NIHKRT Trigger: AGTCCTCTTGTGAATATTCCAGGATGACAATGGTGG...GGAGTCCATGGGGCACCCTTCAACTGACCCTATATAGACTCTATGCAGACCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CAA 90 bp | ACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATaGTCATCCTGGAATATTCACAAGAGGACTGTGGATATAGAAAGT | + |
Preference number: 2 (lower is better) Translates to: TLNLEDHTEAGYGPP*SSWNIHKRTVDIES Trigger: ACTTTCTATATCCACAGTCCTCTTGTGAATATTCCAGGATGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CCA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTATGACAACAGGGCTGTaGGGGAGGATGGGATACATA | + |
Preference number: 2 (lower is better) Translates to: QCRPVSYYSAIHMWCLHIMTTGL*GRMGYI Trigger: TATGTATCCCATCCTCCCCCACAGCCCTGTTGTCAT...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTTTCAATTCCCTCTCCTaGCAGAATTGCTCTTGGAGA | + |
Preference number: 2 (lower is better) Translates to: QCRPVSYYSAIHMWCLHIFNSLS*QNCSWR Trigger: TCTCCAAGAGCAATTCTGTCAGGAGAGGGAATTGAA...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CAA 90 bp | GCTGTGACACTGGAAAGTGCTACAAGCACTAAGCACGTCTTTCTTTaGCTTTCTGAAAAGGTGACTACTAGAAAAAGCAAACTGTCACGT | + |
Preference number: 2 (lower is better) Translates to: AVTLESATSTKHVFL*LSEKVTTRKSKLSR Trigger: ACGTGACAGTTTGCTTTTTCTAGTAGTCACCTTTTCAGAAAGCAAAAGAAAGACGTGCTTAGTGCTTGTAGCACTTTCCAGTGTCACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | CTGAGTACCAGAAACACACAGATGTTCAGTAACCCCAGACTACACACTGAATTTGTATTTCATGCATTTTaGCCTAGTAATGCTGTCCAC | + |
Preference number: 2 (lower is better) Translates to: LSTRNTQMFSNPRLHTEFVFHAF*PSNAVH Trigger: GTGGACAGCATTACTAGGTCAAAATGCATGAAATAC...AAATTCAGTGTGTAGTCTGGGGTTACTGAACATCTGTGTGTTTCTGGTACTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR TCA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTAGTTAAAGAGGGGCTGTaGCACTGGAAAGTGCTACAA | + |
Preference number: 2 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVVKEGL*HWKVLQ Trigger: TTGTAGCACTTTCCAGTGTCACAGCCCCTCTTTAAC...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CCA 72 bp | TCAGTTGAAGGGTGCCCCATGGACTCCCTGGAGTCTTaGTGGGTATTCGTGAGAGTCTTTGATGTGGGGCTG | + |
Preference number: 3 (lower is better) Translates to: SVEGCPMDSLES*WVFVRVFDVGL Trigger: CAGCCCCACATCAAAGACTCTCACGAATACCCACCAAGACTCCAGGGAGTCCATGGGGCACCCTTCAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR TCA 72 bp | GCCCCATGGACTCCCTGGAGTCTTGGTGGGTATTCGTaGGAGTCTTTGATGTGGGGCTGTGTTATCTTTGGA | + |
Preference number: 3 (lower is better) Translates to: APWTPWSLGGYS*ESLMWGCVIFG Trigger: TCCAAAGATAACACAGCCCCACATCAAAGACTCTCACGAATACCCACCAAGACTCCAGGGAGTCCATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CAA 90 bp | GGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGCAACTGAGCTCCCACTTTTaGGAGAGAGACTTTTTGGAG | + |
Preference number: 3 (lower is better) Translates to: GAVLSLESFATLLGPEQQLSSHF*ERDFLE Trigger: CTCCAAAAAGTCTCTCTCCAAAAAGTGGGAGCTCAG...TTGCTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR TCA 72 bp | TGCCTTACTTTACATCCGTGGTTCAATTCCCTCTCCTaGCAGAATTGCTCTTGGAGACAGTATGGGGACAGG | + |
Preference number: 3 (lower is better) Translates to: CLTLHPWFNSLS*QNCSWRQYGDR Trigger: CCTGTCCCCATACTGTCTCCAAGAGCAATTCTGTCAGGAGAGGGAATTGAACCACGGATGTAAAGTAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR GCA 72 bp | GGGAGGTGGGAAGGGCAGGGATTCCTGGAATTTAAGTaGTTAAGCCCTGTAGAGCAGTCACACATTTATCTT | + |
Preference number: 3 (lower is better) Translates to: GRWEGQGFLEFK*LSPVEQSHIYL Trigger: AAGATAAATGTGTGACTGCTCTACAGGGCTTAAGCACTTAAATTCCAGGAATCCCTGCCCTTCCCACCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CCA 72 bp | CACACAGAGGCAGGCTACGGGCCACCATTGTCATCCTaGAATATTCACAAGAGGACTGTGGATATAGAAAGT | + |
Preference number: 3 (lower is better) Translates to: HTEAGYGPPLSS*NIHKRTVDIES Trigger: ACTTTCTATATCCACAGTCCTCTTGTGAATATTCCAGGATGACAATGGTGGCCCGTAGCCTGCCTCTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CAA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTTACTCTAGCATAGGCTaGTTCAGGTATTTCATGCAT | + |
Preference number: 3 (lower is better) Translates to: QVEGNVDLCPITLPFTCGYSSIG*FRYFMH Trigger: ATGCATGAAATACCTGAACAAGCCTATGCTAGAGTA...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CAA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCGACTACACACTGAATTaGGAAGACCACACAGAGGCA | + |
Preference number: 3 (lower is better) Translates to: KLVYKVVGTSCMNSRAPADYTLN*EDHTEA Trigger: TGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTAGTC...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR-3UTR CAA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCAAGCACGTCTTTCTTTaGCTTTCTGAAAAGGTGACT | + |
Preference number: 3 (lower is better) Translates to: KLVYKVVGTSCMNSRAPAKHVFL*LSEKVT Trigger: AGTCACCTTTTCAGAAAGCAAAAGAAAGACGTGCTT...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | ATGACAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGGGGCACGACGCAGGGTaGGGATGGCCAGGGCCTTTT | + |
Preference number: 4 (lower is better) Translates to: MTRLGKGSNDNRAVGEDGGHDAG*GWPGPF Trigger: AAAAGGCCCTGGCCATCCTCACCCTGCGTCGTGCCC...CCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCAT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | ATGACAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGTCCATGCTGGCCAGGTaGTGCAGCAGGCCCGGCACT | + |
Preference number: 4 (lower is better) Translates to: MTRLGKGSNDNRAVGEDGSMLAR*CSRPGT Trigger: AGTGCCGGGCCTGCTGCACCACCTGGCCAGCATGGA...CCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGGCAGGTAGCCCACATTaGCCGGCAGCACGGACACCT | + |
Preference number: 4 (lower is better) Translates to: GRAPNLRSHELKVPTEYQAGSPH*PAARTP Trigger: AGGTGTCCGTGCTGCCGGGCAATGTGGGCTACCTGC...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | AGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGATACATACGGAAGGGCCAGTGTGTCCGCTGGTaGGGACCACCACATCCTTGT | + |
Preference number: 4 (lower is better) Translates to: REAMTTGLWGRMGYIRKGQCVRW*GPPHPC Trigger: ACAAGGATGTGGTGGTCCTCACCAGCGGACACACTG...GCCCTTCCGTATGTATCCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GGGAGGTGGGAAGGGCAGGGATTCCTGGAATTTAAGTGCTTAAGCCCTGTAGAGAGCTCTGGCCCGCTGTaGGATCTCTGGCCGGGCATA | + |
Preference number: 4 (lower is better) Translates to: GRWEGQGFLEFKCLSPVESSGPL*DLWPGI Trigger: TATGCCCGGCCAGAGATCGCACAGCGGGCCAGAGCT...CTCTACAGGGCTTAAGCACTTAAATTCCAGGAATCCCTGCCCTTCCCACCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACAGTCTCTGGGTCCGGTaGCCCTCACCAGGAGCCTGG | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHSLWVR*PSPGAW Trigger: CCAGGCTCCTGGTGAGGGCCACCGGACCCAGAGACT...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | ATGACAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGTGGCTGAAGTGCTCCTaGGTGATGTTGGTGCGGCGA | + |
Preference number: 4 (lower is better) Translates to: MTRLGKGSNDNRAVGEDGWLKCS*VMLVRR Trigger: TCGCCGCACCAACATCACCCAGGAGCACTTCAGCCA...CCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | ATGACAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGGCTTGGCAGCCATCTTaGCCCCCAATTCAGGGGATG | + |
Preference number: 4 (lower is better) Translates to: MTRLGKGSNDNRAVGEDGAWQPS*PPIQGM Trigger: CATCCCCTGAATTGGGGGCCAAGATGGCTGCCAAGC...CCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGATACATACGGAAGGGAGCACAAGGCTGAGATaGAGGAGGTGGGGCCGCCAA | + |
Preference number: 4 (lower is better) Translates to: KGSNDNRAVGEDGIHTEGSTRLR*RRWGRQ Trigger: TTGGCGGCCCCACCTCCTCCATCTCAGCCTTGTGCT...CCCTTCCGTATGTATCCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GGGAGGTGGGAAGGGCAGGGATTCCTGGAATTTAAGTGCTTAAGCCCTGTAGAGGTGAGCACTGGTGCTTaGTGGGGAGCCTCGAGGGTA | + |
Preference number: 4 (lower is better) Translates to: GRWEGQGFLEFKCLSPVEVSTGA*WGASRV Trigger: TACCCTCGAGGCTCCCCAGCAAGCACCAGTGCTCAC...CTCTACAGGGCTTAAGCACTTAAATTCCAGGAATCCCTGCCCTTCCCACCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | TGTGGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGGATGCCCACGGAGAGTaGCCCTCCAGCTGTGGGCTC | + |
Preference number: 4 (lower is better) Translates to: CGAVLSLESFATLLGPEQDAHGE*PSSCGL Trigger: GAGCCCACAGCTGGAGGGGCACTCTCCGTGGGCATC...CTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | AGAGAGACTTTTTGGAGTAGTGGGGACCAGCAGATGAACCCTGGAGGATGTCTGTGCCCACCTGGTAGATaGCCACGGAGAGTGCCCCTC | + |
Preference number: 4 (lower is better) Translates to: RETFWSSGDQQMNPGGCLCPPGR*PRRVPL Trigger: GAGGGGCACTCTCCGTGGGCATCTACCAGGTGGGCA...CAGACATCCTCCAGGGTTCATCTGCTGGTCCCCACTACTCCAAAAAGTCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGCAACCCAGGCCTCACCGGTaGTGGCACTCAGGGCCATCT | + |
Preference number: 4 (lower is better) Translates to: GAVLSLESFATLLGPEQQPRPHR*WHSGPS Trigger: AGATGGCCCTGAGTGCCAGCACCGGTGAGGCCTGGG...TTGCTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TACACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCAAGGCCTCACCGGTGCTaGCACTCAGGGCCATCTGAG | + |
Preference number: 4 (lower is better) Translates to: YTLNLEDHTEAGYGPPLSRPHRC*HSGPSE Trigger: CTCAGATGGCCCTGAGTGCCAGCACCGGTGAGGCCT...TGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGCACCACTGGTCAGGATaGCTACGCTCTTCTTGGAGC | + |
Preference number: 4 (lower is better) Translates to: GRAPNLRSHELKVPTEYQHHWSG*LRSSWS Trigger: GCTCCAAGAAGAGCGTAGCCATCCTGACCAGTGGTG...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGGTGGTAGGTCTGCGGTaGTTGGCAACCTCCACTTGT | + |
Preference number: 4 (lower is better) Translates to: GRAPNLRSHELKVPTEYQVVGLR*LATSTC Trigger: ACAAGTGGAGGTTGCCAACCACCGCAGACCTACCAC...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | AGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGATACATACGGAAGGGCTCCTCAGATACCTCCTaGAGGTCAGCAGTGAGCTGT | + |
Preference number: 4 (lower is better) Translates to: REAMTTGLWGRMGYIRKGSSDTS*RSAVSC Trigger: ACAGCTCACTGCTGACCTTCAGGAGGTATCTGAGGA...GCCCTTCCGTATGTATCCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGCAACTTGGCTGGAAGAGGTaGGTGGGACCAGCCGGAACC | + |
Preference number: 4 (lower is better) Translates to: GAVLSLESFATLLGPEQQLGWKR*VGPAGT Trigger: GGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAG...TTGCTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TACACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCACTGAGTAGTCCATGCTaGCCAGGTGGTGCAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: YTLNLEDHTEAGYGPPLSLSSPC*PGGAAG Trigger: GCCTGCTGCACCACCTGGCCAGCATGGACTACTCAG...TGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | ATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCTCTTGGAGACAGTATGGGGCCCTCACCAGGAGCCTaGGATCCTCCGACACAGCCT | + |
Preference number: 4 (lower is better) Translates to: IRGSIPSPDRIALGDSMGPSPGA*DPPTQP Trigger: AGGCTGTGTCGGAGGATCCCAGGCTCCTGGTGAGGG...CCCCATACTGTCTCCAAGAGCAATTCTGTCAGGAGAGGGAATTGAACCACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGGCTGTGGCAGTCCTGTaGCTAGTAAGCAGGTACACT | + |
Preference number: 4 (lower is better) Translates to: GRAPNLRSHELKVPTEYQAVAVL*LVSRYT Trigger: AGTGTACCTGCTTACTAGCCACAGGACTGCCACAGC...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | ATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCTCTTGGAGACAGTATGGGGTTTCGCCGACCAGTGTaGCCCAGCCCAGGGACTGCA | + |
Preference number: 4 (lower is better) Translates to: IRGSIPSPDRIALGDSMGFRRPV*PSPGTA Trigger: TGCAGTCCCTGGGCTGGGCCACACTGGTCGGCGAAA...CCCCATACTGTCTCCAAGAGCAATTCTGTCAGGAGAGGGAATTGAACCACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | TGTGGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGGTAAGAGCACAAGGCTaGGATGGAGGAGGTGGGGCC | + |
Preference number: 4 (lower is better) Translates to: CGAVLSLESFATLLGPEQVRAQG*DGGGGA Trigger: GGCCCCACCTCCTCCATCTCAGCCTTGTGCTCTTAC...CTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | ATGACAAGGCTTGGCAAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGATGTTCCTCTGTATCTaGGCCAGCAGTTCTTCTCGG | + |
Preference number: 4 (lower is better) Translates to: MTRLGKGSNDNRAVGEDGMFLCI*ASSSSR Trigger: CCGAGAAGAACTGCTGGCCCAGATACAGAGGAACAT...CCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTTGCCAAGCCTTGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTATAGGAGAGTTCCTCTaGGGAGGGAACGGCAGGGGG | + |
Preference number: 4 (lower is better) Translates to: QVEGNVDLCPITLPFTCGIGEFL*GGNGRG Trigger: CCCCCTGCCGTTCCCTCCCCAGAGGAACTCTCCTAT...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGGCAGAGCCACTAGTGTaGCTCATGAGGATGTATAGG | + |
Preference number: 4 (lower is better) Translates to: GRAPNLRSHELKVPTEYQAEPLV*LMRMYR Trigger: CCTATACATCCTCATGAGCCACACTAGTGGCTCTGC...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACCGGCTGTCACACCACTaGTCAGGATGGCTACGCTCT | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHRLSHH*SGWLRS Trigger: AGAGCGTAGCCATCCTGACCAGTGGTGTGACAGCCG...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACCACTCATGGGCACAGTaGTGTCAGGTTCCACACCAG | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHHSWAQ*CQVPHQ Trigger: CTGGTGTGGAACCTGACATCACTGTGCCCATGAGTG...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGCAAGCCCAGCCCAGGGACTaGATGAGGAAGGCAAACTCT | + |
Preference number: 4 (lower is better) Translates to: GAVLSLESFATLLGPEQQAQPRD*MRKANS Trigger: AGAGTTTGCCTTCCTCATGCAGTCCCTGGGCTGGGC...TTGCTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTAGCAAAGGCCTCGGCTaGAGAGCCACTAGTGTGGCT | + |
Preference number: 4 (lower is better) Translates to: QVEGNVDLCPITLPFTCGSKGLG*RATSVA Trigger: AGCCACACTAGTGGCTCTGCAGCCGAGGCCTTTGCT...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AGAGAGACTTTTTGGAGTAGTGGGGACCAGCAGATGAACCCTGGAGGATGTCTGTCCAGATCTCTGTGGTaGTGTTGGAGGGCCGATCGT | + |
Preference number: 4 (lower is better) Translates to: RETFWSSGDQQMNPGGCLSRSLW*CWRADR Trigger: ACGATCGGCCCTCCAACACCACCACAGAGATCTGGA...CAGACATCCTCCAGGGTTCATCTGCTGGTCCCCACTACTCCAAAAAGTCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TACACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCAAGGACCACTATGTCCTaGGCTGTGGAAAGGGCCTCA | + |
Preference number: 4 (lower is better) Translates to: YTLNLEDHTEAGYGPPLSRTTMS*AVERAS Trigger: TGAGGCCCTTTCCACAGCCCAGGACATAGTGGTCCT...TGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CAA 72 bp | CACAGATGTTCAGTAACCCCAGACTACACACTGAATTaGGAAGACCACACAGAGGCAGGCTACGGGCCACCA | + |
Preference number: 4 (lower is better) Translates to: HRCSVTPDYTLN*EDHTEAGYGPP Trigger: TGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTAGTCTGGGGTTACTGAACATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGACTTGGGCCAGCGTCTaGGGGTCTGAGATGCCCAGA | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFETWASV*GSEMPR Trigger: TCTGGGCATCTCAGACCCTCAGACGCTGGCCCAAGT...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | CATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACAAGGCTTGGCCTGAAGGTCAGCAGTaGGCTGTGAGGCCAGTGACT | + |
Preference number: 4 (lower is better) Translates to: HSHVVSTHSSCVAHDKAWPEGQQ*AVRPVT Trigger: AGTCACTGGCCTCACAGCTCACTGCTGACCTTCAGG...CCAAGCCTTGTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | AAGGGAAGCAATGACAACAGGGCTGTGGGGGAGGATGGGATACATACGGAAGGGTGCTCAATGGCTGCTTaGATTCCCATCAGGTTCTCA | + |
Preference number: 4 (lower is better) Translates to: KGSNDNRAVGEDGIHTEGCSMAA*IPIRFS Trigger: TGAGAACCTGATGGGAATGCAAGCAGCCATTGAGCA...CCCTTCCGTATGTATCCCATCCTCCCCCACAGCCCTGTTGTCATTGCTTCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTAGGTAGCCCACGTTaGCCTCAAGAACCTCATGGC | + |
Preference number: 4 (lower is better) Translates to: QVEGNVDLCPITLPFTCGVGSPR*PQEPHG Trigger: GCCATGAGGTTCTTGAGGGCAACGTGGGCTACCTAC...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACTCCTCCGACACAGCCTaGAAGCCAGCATTGAGCTTT | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHSSDTA*KPALSF Trigger: AAAGCTCAATGCTGGCTTGCAGGCTGTGTCGGAGGA...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | CATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACAAGGCTTGGTACCCCCTCAGGGCCTaGTGGAGTATCTCCTTGGCT | + |
Preference number: 4 (lower is better) Translates to: HSHVVSTHSSCVAHDKAWYPLRA*WSISLA Trigger: AGCCAAGGAGATACTCCAGCAGGCCCTGAGGGGGTA...CCAAGCCTTGTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACCCTATTCTCAGCTTCTaGAGGTCCAGGGCCCCACCC | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDPILSF*RSRAPP Trigger: GGGTGGGGCCCTGGACCTCCAGAAGCTGAGAATAGG...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGTTGAGGAGGAGTCTCTaGGTCCGGTGGCCCTCACCA | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFELRRSL*VRWPSP Trigger: TGGTGAGGGCCACCGGACCCAGAGACTCCTCCTCAA...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | CCTGGTCTGCATAGAGTCTATATAGGGTCAGTTGAAGGGTGCCCCATGGACTCCTCTTGTCCAGCAGAATaGGAGGTGCCTCGTCAAAGA | + |
Preference number: 4 (lower is better) Translates to: PGLHRVYIGSVEGCPMDSSCPAE*EVPRQR Trigger: TCTTTGACGAGGCACCTCCCATTCTGCTGGACAAGA...GGAGTCCATGGGGCACCCTTCAACTGACCCTATATAGACTCTATGCAGACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCAGCGTCTGAGGGTCTaGGATGCCCAGAATCTCGTG | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFEQRLRV*DAQNLV Trigger: CACGAGATTCTGGGCATCTCAGACCCTCAGACGCTG...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGAGGTCCTGCATAGTGTaGGCAAAGGCCTCGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFERSCIV*AKASAA Trigger: TGCAGCCGAGGCCTTTGCTCACACTATGCAGGACCT...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACAGCCAAGGCCCCTTCTaGAGTCACCCTTGCATAGCG | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDSQGPF*SHPCIA Trigger: CGCTATGCAAGGGTGACTTCAGAAGGGGCCTTGGCT...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | GAAAGTGCTACAAGCACTAAGCACGTCTTTCTTTTGCTTTCTGAAAAGGTGACTTTGTCACTTCACCGATaGCCAGGGCCCGGCCCAGCC | + |
Preference number: 4 (lower is better) Translates to: ESATSTKHVFLLLSEKVTLSLHR*PGPGPA Trigger: GGCTGGGCCGGGCCCTGGTCATCGGTGAAGTGACAA...AGTCACCTTTTCAGAAAGCAAAAGAAAGACGTGCTTAGTGCTTGTAGCACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACGTAGGCAATGTCCTCTaGGACTCCCCCAGTGTGTCC | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDVGNVL*DSPSVS Trigger: GGACACACTGGGGGAGTCGCAGAGGACATTGCCTAC...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACGAGTATTTGCAGATCTaGCCCCAGCATCTCAGCCAA | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHEYLQI*PQHLSQ Trigger: TTGGCTGAGATGCTGGGGGCAGATCTGCAAATACTC...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | AGAGAGACTTTTTGGAGTAGTGGGGACCAGCAGATGAACCCTGGAGGATGTCTGATCCTCTGGAATGTGTaGTGTCTTCAGGTGTGGGTC | + |
Preference number: 4 (lower is better) Translates to: RETFWSSGDQQMNPGGCLILWNV*CLQVWV Trigger: GACCCACACCTGAAGACAGCACACATTCCAGAGGAT...CAGACATCCTCCAGGGTTCATCTGCTGGTCCCCACTACTCCAAAAAGTCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGATCCAGTACCAGGCTTaGCTGGAAGAGGTGCGTGGG | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFEIQYQA*LEEVRG Trigger: CCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGAT...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TACACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCATCACTCAAGGAACTCTaGACTCCAGCTGTCAGCACT | + |
Preference number: 4 (lower is better) Translates to: YTLNLEDHTEAGYGPPLSSLKEL*TPAVST Trigger: AGTGCTGACAGCTGGAGTCCAGAGTTCCTTGAGTGA...TGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TCACGTGTGCCTTACTTTACATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGTCTCTGTGGTGGTGTTaGAGGGCCGATCGTAGACGG | + |
Preference number: 4 (lower is better) Translates to: SRVPYFTSVVQFPLLTELSLWWC*RADRRR Trigger: CCGTCTACGATCGGCCCTCCAACACCACCACAGAGA...CAATTCTGTCAGGAGAGGGAATTGAACCACGGATGTAAAGTAAGGCACACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACATTGCAGGAGAGCTCTaGCCCGCTGTGCGATCTCTG | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDIAGEL*PAVRSL Trigger: CAGAGATCGCACAGCGGGCCAGAGCTCTCCTGCAAT...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACTCTCTAGCTCAGCCATaGCGTCAAAACGCAAGTAGC | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHSLAQP*RQNASS Trigger: GCTACTTGCGTTTTGACGCCATGGCTGAGCTAGAGA...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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3UTR CAA 72 bp | TTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATaGTCATCCTGGAATATTCACAAGAGGACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: LEDHTEAGYGPP*SSWNIHKRTVD Trigger: ATCCACAGTCCTCTTGTGAATATTCCAGGATGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | TACACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCAGGTGCAAGTAAGAGATaGCATAAGGGATCCCAGAGA | + |
Preference number: 4 (lower is better) Translates to: YTLNLEDHTEAGYGPPLSGASKR*HKGSQR Trigger: TCTCTGGGATCCCTTATGTCATCTCTTACTTGCACC...TGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACTTCAGAGACCACAGCTaGGTAGTCCATGCTGGCCAG | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDFRDHS*VVHAGQ Trigger: CTGGCCAGCATGGACTACTCAGCTGTGGTCTCTGAA...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTGGACCCCCAGGGTTATaGCGCAGGTCCATGATGAGG | + |
Preference number: 4 (lower is better) Translates to: QCRPVSYYSAIHMWCLHIGPPGL*RRSMMR Trigger: CCTCATCATGGACCTGCGTCATAACCCTGGGGGTCC...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACTCCCGATGGCTGAAGTaGTCCTGGGTGATGTTGGTG | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDSRWLK*SWVMLV Trigger: CACCAACATCACCCAGGAGCACTTCAGCCATCGGGA...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | CTGAGTACCAGAAACACACAGATGTTCAGTAACCCCAGACTACACACTGAATTTCCAAGTCCACAGCTGTaGGGTAGGCTCCTTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: LSTRNTQMFSNPRLHTEFPSPQL*GRLLGP Trigger: TGGCCCAAGGAGCCTACCGCACAGCTGTGGACTTGG...AAATTCAGTGTGTAGTCTGGGGTTACTGAACATCTGTGTGTTTCTGGTACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | AGAGAGACTTTTTGGAGTAGTGGGGACCAGCAGATGAACCCTGGAGGATGTCTGCAGCAGAATGGGAGGTaGCTCGTCAAAGAAGTAAGA | + |
Preference number: 4 (lower is better) Translates to: RETFWSSGDQQMNPGGCLQQNGR*LVKEVR Trigger: TCTTACTTCTTTGACGAGGCACCTCCCATTCTGCTG...CAGACATCCTCCAGGGTTCATCTGCTGGTCCCCACTACTCCAAAAAGTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGAACCCAGAGCAGTGTaGACAAAACCAGGACCCATT | + |
Preference number: 4 (lower is better) Translates to: QVEGNVDLCPITLPFTCGEPRAV*TKPGPI Trigger: AATGGGTCCTGGTTTTGTCCACACTGCTCTGGGTTC...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCGCTCGCCCACCACGATaGCGCGCCGCATCTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: KLVYKVVGTSCMNSRAPAARPPR*RAASAS Trigger: TGAAGCAGATGCGGCGCGCCATCGTGGTGGGCGAGC...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCCTCAGCCAGCACGATaGCATCAGGTACCACCCCAC | + |
Preference number: 4 (lower is better) Translates to: QCRPVSYYSAIHMWCLHIPQPAR*HQVPPH Trigger: GTGGGGTGGTACCTGATGCCATCGTGCTGGCTGAGG...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTATGTCCTGGGCTGTaGAAAGGGCCTCACTCATGG | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFELCPGL*KGPHSW Trigger: CCATGAGTGAGGCCCTTTCCACAGCCCAGGACATAG...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AGGACTGCAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACGTCTTTGGCATCCTCTaGAATGTGTGCTGTCTTCAG | + |
Preference number: 4 (lower is better) Translates to: RTAGGGQCRPVSYYSAIHVFGIL*NVCCLQ Trigger: CTGAAGACAGCACACATTCCAGAGGATGCCAAAGAC...GTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTGCAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTAGCCCAGGGACTGCATaGGGAAGGCAAACTCTTCGG | + |
Preference number: 4 (lower is better) Translates to: QCRPVSYYSAIHMWCLHISPGTA*GRQTLR Trigger: CCGAAGAGTTTGCCTTCCTCATGCAGTCCCTGGGCT...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTAATGCTGGCCAGGTGGTaGAGCAGGCCCGGCACTCGG | + |
Preference number: 4 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVMLARW*SRPGTR Trigger: CCGAGTGCCGGGCCTGCTGCACCACCTGGCCAGCAT...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | TCACGTGTGCCTTACTTTACATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCATATAAGGGGCTGTTaGCCACCTGGTAGATGCCCA | + |
Preference number: 4 (lower is better) Translates to: SRVPYFTSVVQFPLLTELHIRGC*PPGRCP Trigger: TGGGCATCTACCAGGTGGGCAACAGCCCCTTATATG...CAATTCTGTCAGGAGAGGGAATTGAACCACGGATGTAAAGTAAGGCACACGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCCTGCAAGCCAGCATTaGGCTTTGTCACCAGGTCCT | + |
Preference number: 4 (lower is better) Translates to: QCRPVSYYSAIHMWCLHIPASQH*ALSPGP Trigger: AGGACCTGGTGACAAAGCTCAATGCTGGCTTGCAGG...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | TTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACCATATCGTTCACCTGTaGGCTGAGTGTGGGTCCAAA | + |
Preference number: 4 (lower is better) Translates to: LLCHSHVVSTHSSCVAHDHIVHL*AECGSK Trigger: TTTGGACCCACACTCAGCTCACAGGTGAACGATATG...GTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR GCA 90 bp | GTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTCGAGTCTGAGGGTCTGAGATaGCCAGAATCTCGTGACTCT | + |
Preference number: 4 (lower is better) Translates to: VDLCPITLPFTCGVYTFESEGLR*PESRDS Trigger: AGAGTCACGAGATTCTGGGCATCTCAGACCCTCAGA...CTCGAATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTAGGGATCCCAGAGAAGTaGCCGCCAGAGCAGTGCCGG | + |
Preference number: 4 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVGIPEK*PPEQCR Trigger: CCGGCACTGCTCTGGCGGCCACTTCTCTGGGATCCC...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | CTGAGTACCAGAAACACACAGATGTTCAGTAACCCCAGACTACACACTGAATTTAGGTCCAGATCTCTGTaGTGGTGTTGGAGGGCCGAT | + |
Preference number: 4 (lower is better) Translates to: LSTRNTQMFSNPRLHTEFRSRSL*WCWRAD Trigger: ATCGGCCCTCCAACACCACCACAGAGATCTGGACCT...AAATTCAGTGTGTAGTCTGGGGTTACTGAACATCTGTGTGTTTCTGGTACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TCACGTGTGCCTTACTTTACATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCTAGCTGAGGCCCAATaGCCTTTACTGTCTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: SRVPYFTSVVQFPLLTELLAEAQ*PLLSLA Trigger: AGCTAGAGACAGTAAAGGCCATTGGGCCTCAGCTAG...CAATTCTGTCAGGAGAGGGAATTGAACCACGGATGTAAAGTAAGGCACACGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCCTGCCTTCCCATGTCTaGCCACCTCCACCTAGAGGT | + |
Preference number: 4 (lower is better) Translates to: KLVYKVVGTSCMNSRAPALPSHV*PPPPRG Trigger: ACCTCTAGGTGGAGGTGGCCAGACATGGGAAGGCAG...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | CATTCACATGTGGTGTCTACACATTCGAGCTGTGTAGCACATGACAAGGCTTGGAGCCAGGCCTCACCGTaGTTGTCAATAAAAGTAAGT | + |
Preference number: 4 (lower is better) Translates to: HSHVVSTHSSCVAHDKAWSQASP*LSIKVS Trigger: ACTTACTTTTATTGACAACCACGGTGAGGCCTGGCT...CCAAGCCTTGTCATGTGCTACACAGCTCGAATGTGTAGACACCACATGTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | TCACGTGTGCCTTACTTTACATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCAGGAATTCGGTCTTTaGCATCCTCTGGAATGTGTG | + |
Preference number: 4 (lower is better) Translates to: SRVPYFTSVVQFPLLTELQEFGL*HPLECV Trigger: CACACATTCCAGAGGATGCCAAAGACCGAATTCCTG...CAATTCTGTCAGGAGAGGGAATTGAACCACGGATGTAAAGTAAGGCACACGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTAGCAGACCGCTTAGCTTaGCAGCCATCTTGGCCCCCA | + |
Preference number: 4 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVADRLA*QPSWPP Trigger: TGGGGGCCAAGATGGCTGCCAAGCTAAGCGGTCTGC...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CCA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTAAGTACCAGGCTTGGCTaGAAGAGGTGCGTGGGACCA | + |
Preference number: 4 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVSTRLG*KRCVGP Trigger: TGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACT...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR TCA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCGGTAAGGGCCAATTCTaGAGAGACAACTACATTAGG | + |
Preference number: 4 (lower is better) Translates to: KLVYKVVGTSCMNSRAPAGKGQF*RDNYIR Trigger: CCTAATGTAGTTGTCTCTTCAGAATTGGCCCTTACC...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GCCAGGCCACCCTGGGGCGAGTCCAGCAGTGGCACCGTGCAGGTGTaGAGCAGGCTACCCGCGGTGATTTCGCCGACCAGTGTGGCCCAG | + |
Preference number: 5 (lower is better) Translates to: ARPPWGESSSGTVQV*SRLPAVISPTSVAQ Trigger: CTGGGCCACACTGGTCGGCGAAATCACCGCGGGTAGCCTGCTCCACACCTGCACGGTGCCACTGCTGGACTCGCCCCAGGGTGGCCTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | TACCGGTACTGTGAGCGCCAGGCCACCCTGGGGCGAGTCCAGCAGTaGCACCGTGCAGGTGTGGAGCAGGCTACCCGCGGTGATTTCGCC | + |
Preference number: 5 (lower is better) Translates to: YRYCERQATLGRVQQ*HRAGVEQATRGDFA Trigger: GGCGAAATCACCGCGGGTAGCCTGCTCCACACCTGCACGGTGCCACTGCTGGACTCGCCCCAGGGTGGCCTGGCGCTCACAGTACCGGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | CTCGGGGGTGGCTGCTGGGGACTCATTAGGCCCAGTCTCAGGTCTTaGGGAGGAGTCTCTGGGTCCGGTGGCCCTCACCAGGAGCCTGGG | + |
Preference number: 5 (lower is better) Translates to: LGGGCWGLIRPSLRS*GGVSGSGGPHQEPG Trigger: CCCAGGCTCCTGGTGAGGGCCACCGGACCCAGAGACTCCTCCTCAAGACCTGAGACTGGGCCTAATGAGTCCCCAGCAGCCACCCCCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | TCTGGAGGTCCAGGGCCCCACCCTCCGTCCGCTCGCCCACCACGATaGCGCGCCGCATCTGCTTCAGGATGTAGGCAATGTCCTCTGCGA | + |
Preference number: 5 (lower is better) Translates to: SGGPGPHPPSARPPR*RAASASGCRQCPLR Trigger: TCGCAGAGGACATTGCCTACATCCTGAAGCAGATGCGGCGCGCCATCGTGGTGGGCGAGCGGACGGAGGGTGGGGCCCTGGACCTCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | GTGCGATCTCTGGCCGGGCATAGTGAGCCTCCAGCAGGCGACCCGTaGCCTCTACCAAGGCGCCCAGACTGCGATGGAAGTCCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: VRSLAGHSEPPAGDP*PLPRRPDCDGSPAP Trigger: AGGTGCTGGACTTCCATCGCAGTCTGGGCGCCTTGGTAGAGGGCACGGGTCGCCTGCTGGAGGCTCACTATGCCCGGCCAGAGATCGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | GAGCCTCCAGCAGGCGACCCGTGCCCTCTACCAAGGCGCCCAGACTaGGATGGAAGTCCAGCACCTCCTGAGCTCTCTCTAAGGCCTCCT | + |
Preference number: 5 (lower is better) Translates to: EPPAGDPCPLPRRPD*DGSPAPPELSLRPP Trigger: AGGAGGCCTTAGAGAGAGCTCAGGAGGTGCTGGACTTCCATCGCAGTCTGGGCGCCTTGGTAGAGGGCACGGGTCGCCTGCTGGAGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GGCCAACTTAGATTGCAGGAGAGCTCTGGCCCGCTGTGCGATCTCTaGCCGGGCATAGTGAGCCTCCAGCAGGCGACCCGTGCCCTCTAC | + |
Preference number: 5 (lower is better) Translates to: GQLRLQESSGPLCDL*PGIVSLQQATRALY Trigger: GTAGAGGGCACGGGTCGCCTGCTGGAGGCTCACTATGCCCGGCCAGAGATCGCACAGCGGGCCAGAGCTCTCCTGCAATCTAAGTTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | GGTCCGGTGGCCCTCACCAGGAGCCTGGGATCCTCCGACACAGCCTaGAAGCCAGCATTGAGCTTTGTCACCAGGTCCTCTTCAGAGACC | + |
Preference number: 5 (lower is better) Translates to: GPVALTRSLGSSDTA*KPALSFVTRSSSET Trigger: GGTCTCTGAAGAGGACCTGGTGACAAAGCTCAATGCTGGCTTGCAGGCTGTGTCGGAGGATCCCAGGCTCCTGGTGAGGGCCACCGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | ACAGGCACTGTGAGGAAGAAGTTGGACTGGCCTATTCTCAGCTTCTaGAGGTCCAGGGCCCCACCCTCCGTCCGCTCGCCCACCACGATG | + |
Preference number: 5 (lower is better) Translates to: TGTVRKKLDWPILSF*RSRAPPSVRSPTTM Trigger: CATCGTGGTGGGCGAGCGGACGGAGGGTGGGGCCCTGGACCTCCAGAAGCTGAGAATAGGCCAGTCCAACTTCTTCCTCACAGTGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GGTCCCAGGGACCTGGACACAGGCACTGTGAGGAAGAAGTTGGACTaGCCTATTCTCAGCTTCTGGAGGTCCAGGGCCCCACCCTCCGTC | + |
Preference number: 5 (lower is better) Translates to: GPRDLDTGTVRKKLD*PILSFWRSRAPPSV Trigger: GACGGAGGGTGGGGCCCTGGACCTCCAGAAGCTGAGAATAGGCCAGTCCAACTTCTTCCTCACAGTGCCTGTGTCCAGGTCCCTGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | CGCCAGAGCAGTGCCGGAGATCTAGCACCAAGGAGGAGGTGCTCATaGGCTGCCTCCACACATGGCTCACTAAGAACTCCCCCAGCTCGC | + |
Preference number: 5 (lower is better) Translates to: RQSSAGDLAPRRRCS*AASTHGSLRTPPAR Trigger: GCGAGCTGGGGGAGTTCTTAGTGAGCCATGTGTGGAGGCAGCTCATGAGCACCTCCTCCTTGGTGCTAGATCTCCGGCACTGCTCTGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | GCCAGCATTGAGCTTTGTCACCAGGTCCTCTTCAGAGACCACAGCTaGGTAGTCCATGCTGGCCAGGTGGTGCAGCAGGCCCGGCACTCG | + |
Preference number: 5 (lower is better) Translates to: ASIELCHQVLFRDHS*VVHAGQVVQQARHS Trigger: CGAGTGCCGGGCCTGCTGCACCACCTGGCCAGCATGGACTACTCAGCTGTGGTCTCTGAAGAGGACCTGGTGACAAAGCTCAATGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | CCACTATGTCCTGGGCTGTGGAAAGGGCCTCACTCATGGGCACAGTaGTGTCAGGTTCCACACCAGCCAAGTCCCAGGCCTCACCGGTGC | + |
Preference number: 5 (lower is better) Translates to: PLCPGLWKGPHSWAQ*CQVPHQPSPRPHRC Trigger: GCACCGGTGAGGCCTGGGACTTGGCTGGTGTGGAACCTGACATCACTGTGCCCATGAGTGAGGCCCTTTCCACAGCCCAGGACATAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | CACGATGGCGCGCCGCATCTGCTTCAGGATGTAGGCAATGTCCTCTaGGACTCCCCCAGTGTGTCCGCTGGTGAGGACCACCACATCCTT | + |
Preference number: 5 (lower is better) Translates to: HDGAPHLLQDVGNVL*DSPSVSAGEDHHIL Trigger: AAGGATGTGGTGGTCCTCACCAGCGGACACACTGGGGGAGTCGCAGAGGACATTGCCTACATCCTGAAGCAGATGCGGCGCGCCATCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | GCACAGCGGCGTCTGCAAATCTATCAAAGCGCAGGTAGCCCACATTaGCCGGCAGCACGGACACCTGAAACACAGAGTCCACCAGGGCCC | + |
Preference number: 5 (lower is better) Translates to: AQRRLQIYQSAGSPH*PAARTPETQSPPGP Trigger: GGGCCCTGGTGGACTCTGTGTTTCAGGTGTCCGTGCTGCCGGGCAATGTGGGCTACCTGCGCTTTGATAGATTTGCAGACGCCGCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GGATCTTGGCCATATCCAGTACCAGGCTTGGCTGGAAGAGGTGCGTaGGACCAGCCGGAACCCAGAGCAGTGTGGACAAAACCAGGACCC | + |
Preference number: 5 (lower is better) Translates to: GSWPYPVPGLAGRGA*DQPEPRAVWTKPGP Trigger: GGGTCCTGGTTTTGTCCACACTGCTCTGGGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | GGAAGGGCTCCTAACCTCAGAAGCCATGAGCTGAAGGTCCCCACTGAGTACCAGCTCGCTCAGTACCTCTaGGCCAGGGAGGTCGTCCAC | + |
Preference number: 5 (lower is better) Translates to: GRAPNLRSHELKVPTEYQLAQYL*AREVVH Trigger: GTGGACGACCTCCCTGGCCAAGAGGTACTGAGCGAG...CTGGTACTCAGTGGGGACCTTCAGCTCATGGCTTCTGAGGTTAGGAGCCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | GGATGTAGGCAATGTCCTCTGCGACTCCCCCAGTGTGTCCGCTGGTaGGGACCACCACATCCTTGTCAGCACTGTATCTCTCCCCGAGGA | + |
Preference number: 5 (lower is better) Translates to: GCRQCPLRLPQCVRW*GPPHPCQHCISPRG Trigger: TCCTCGGGGAGAGATACAGTGCTGACAAGGATGTGGTGGTCCTCACCAGCGGACACACTGGGGGAGTCGCAGAGGACATTGCCTACATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | AGCGCAGCTGTGTCCACCAGCCTCTGCCACACCAGCTGTACTAGCTaGGGCCCAATGGCCTTTACTGTCTCTAGCTCAGCCATGGCGTCA | + |
Preference number: 5 (lower is better) Translates to: SAAVSTSLCHTSCTS*GPMAFTVSSSAMAS Trigger: TGACGCCATGGCTGAGCTAGAGACAGTAAAGGCCATTGGGCCTCAGCTAGTACAGCTGGTGTGGCAGAGGCTGGTGGACACAGCTGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | AGGAGGATCTTGGCCATATCCAGTACCAGGCTTGGCTGGAAGAGGTaGGTGGGACCAGCCGGAACCCAGAGCAGTGTGGACAAAACCAGG | + |
Preference number: 5 (lower is better) Translates to: RRILAISSTRLGWKR*VGPAGTQSSVDKTR Trigger: CCTGGTTTTGTCCACACTGCTCTGGGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAAGATCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | GTACCTCTTGGCCAGGGAGGTCGTCCACTCGTAGGTAGCCCACGTTaGCCTCAAGAACCTCATGGCGGATGTTCCTCTGTATCTGGGCCA | + |
Preference number: 5 (lower is better) Translates to: VPLGQGGRPLVGSPR*PQEPHGGCSSVSGP Trigger: TGGCCCAGATACAGAGGAACATCCGCCATGAGGTTCTTGAGGGCAACGTGGGCTACCTACGAGTGGACGACCTCCCTGGCCAAGAGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | CTGGGGAGCCTCGAGGGTACTGGGCTCGTAAGAGATGAAGAGTCGTaGGTCACTCAAGGAACTCTGGACTCCAGCTGTCAGCACTTGGGC | + |
Preference number: 5 (lower is better) Translates to: LGSLEGTGLVRDEES*VTQGTLDSSCQHLG Trigger: GCCCAAGTGCTGACAGCTGGAGTCCAGAGTTCCTTGAGTGACCCACGACTCTTCATCTCTTACGAGCCCAGTACCCTCGAGGCTCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | ACTCTGGACTCCAGCTGTCAGCACTTGGGCCAGCGTCTGAGGGTCTaGGATGCCCAGAATCTCGTGACTCTTCATCGCCTGCTCAATGGC | + |
Preference number: 5 (lower is better) Translates to: TLDSSCQHLGQRLRV*DAQNLVTLHRLLNG Trigger: GCCATTGAGCAGGCGATGAAGAGTCACGAGATTCTGGGCATCTCAGACCCTCAGACGCTGGCCCAAGTGCTGACAGCTGGAGTCCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | GGACTCCAGCTGTCAGCACTTGGGCCAGCGTCTGAGGGTCTGAGATaGCCAGAATCTCGTGACTCTTCATCGCCTGCTCAATGGCTGCTT | + |
Preference number: 5 (lower is better) Translates to: GLQLSALGPASEGLR*PESRDSSSPAQWLL Trigger: AAGCAGCCATTGAGCAGGCGATGAAGAGTCACGAGATTCTGGGCATCTCAGACCCTCAGACGCTGGCCCAAGTGCTGACAGCTGGAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GCAGTAGTTATCCAGGAGGATCTTGGCCATATCCAGTACCAGGCTTaGCTGGAAGAGGTGCGTGGGACCAGCCGGAACCCAGAGCAGTGT | + |
Preference number: 5 (lower is better) Translates to: AVVIQEDLGHIQYQA*LEEVRGTSRNPEQC Trigger: ACACTGCTCTGGGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAAGATCCTCCTGGATAACTACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | CCCACGTTGCCCTCAAGAACCTCATGGCGGATGTTCCTCTGTATCTaGGCCAGCAGTTCTTCTCGGGTGAGGTTGGTGAGCACTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: PTLPSRTSWRMFLCI*ASSSSRVRLVSTGA Trigger: AGCACCAGTGCTCACCAACCTCACCCGAGAAGAACTGCTGGCCCAGATACAGAGGAACATCCGCCATGAGGTTCTTGAGGGCAACGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GTACTAGCTGAGGCCCAATGGCCTTTACTGTCTCTAGCTCAGCCATaGCGTCAAAACGCAAGTAGCCGAGCTGGCCGGGTAGCACATCCG | + |
Preference number: 5 (lower is better) Translates to: VLAEAQWPLLSLAQP*RQNASSRAGRVAHP Trigger: CGGATGTGCTACCCGGCCAGCTCGGCTACTTGCGTTTTGACGCCATGGCTGAGCTAGAGACAGTAAAGGCCATTGGGCCTCAGCTAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GTCTGCAGAACAGTGGGCACCTTAGCACGCAGGACCACTATGTCCTaGGCTGTGGAAAGGGCCTCACTCATGGGCACAGTGATGTCAGGT | + |
Preference number: 5 (lower is better) Translates to: VCRTVGTLARRTTMS*AVERASLMGTVMSG Trigger: ACCTGACATCACTGTGCCCATGAGTGAGGCCCTTTCCACAGCCCAGGACATAGTGGTCCTGCGTGCTAAGGTGCCCACTGTTCTGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GATGGTGATGTAGAGATGGGTGTCATCCACGTGGTAGGTCTGCGGTaGTTGGCAACCTCCACTTGTCACTTCACCGATGACCAGGGCCCG | + |
Preference number: 5 (lower is better) Translates to: DGDVEMGVIHVVGLR*LATSTCHFTDDQGP Trigger: CGGGCCCTGGTCATCGGTGAAGTGACAAGTGGAGGTTGCCAACCACCGCAGACCTACCACGTGGATGACACCCATCTCTACATCACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | AGATCTAGCACCAAGGAGGAGGTGCTCATGAGCTGCCTCCACACATaGCTCACTAAGAACTCCCCCAGCTCGCTCAGTACCTCTTGGCCA | + |
Preference number: 5 (lower is better) Translates to: RSSTKEEVLMSCLHT*LTKNSPSSLSTSWP Trigger: TGGCCAAGAGGTACTGAGCGAGCTGGGGGAGTTCTTAGTGAGCCATGTGTGGAGGCAGCTCATGAGCACCTCCTCCTTGGTGCTAGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | TACACACTGAATTTGGAAGACCACACAGAGGCAGGCTACGGGCCACCATTGTCATGCAGACCGCTTAGCTaGGCAGCCATCTTGGCCCCC | + |
Preference number: 5 (lower is better) Translates to: YTLNLEDHTEAGYGPPLSCRPLS*AAILAP Trigger: GGGGGCCAAGATGGCTGCCAAGCTAAGCGGTCTGCA...TGACAATGGTGGCCCGTAGCCTGCCTCTGTGTGGTCTTCCAAATTCAGTGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | AGGATGGCTACGCTCTTCTTGGAGCCATATCGTTCACCTGTGAGCTaGGTGTGGGTCCAAAGTTCGCTGACCGAGTCATTGGGCCGGTTG | + |
Preference number: 5 (lower is better) Translates to: RMATLFLEPYRSPVS*VWVQSSLTESLGRL Trigger: CAACCGGCCCAATGACTCGGTCAGCGAACTTTGGACCCACACTCAGCTCACAGGTGAACGATATGGCTCCAAGAAGAGCGTAGCCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 90 bp | CAGGGCCTGCTGGAGTATCTCCTTGGCTCTGGTAAGGGCCAATTCTaGAGAGACAACTACATTAGGTGTCACGCCCACCCCTTCCCAGGA | + |
Preference number: 5 (lower is better) Translates to: QGLLEYLLGSGKGQF*RDNYIRCHAHPFPG Trigger: TCCTGGGAAGGGGTGGGCGTGACACCTAATGTAGTTGTCTCTTCAGAATTGGCCCTTACCAGAGCCAAGGAGATACTCCAGCAGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | TGTCCACCAGCCTCTGCCACACCAGCTGTACTAGCTGAGGCCCAATaGCCTTTACTGTCTCTAGCTCAGCCATGGCGTCAAAACGCAAGT | + |
Preference number: 5 (lower is better) Translates to: CPPASATPAVLAEAQ*PLLSLAQPWRQNAS Trigger: ACTTGCGTTTTGACGCCATGGCTGAGCTAGAGACAGTAAAGGCCATTGGGCCTCAGCTAGTACAGCTGGTGTGGCAGAGGCTGGTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | TTCCCATCAGGTTCTCAGGGAAGCAGTAGTTATCCAGGAGGATCTTaGCCATATCCAGTACCAGGCTTGGCTGGAAGAGGTGCGTGGGAC | + |
Preference number: 5 (lower is better) Translates to: FPSGSQGSSSYPGGS*PYPVPGLAGRGAWD Trigger: GTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAAGATCCTCCTGGATAACTACTGCTTCCCTGAGAACCTGATGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | ATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCTCTTGGAGACAGTATGGGGGCCCAGTCTCAGGTCTaGAGGAGGAGTCTCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: IRGSIPSPDRIALGDSMGAQSQV*RRSLWV Trigger: GACCCAGAGACTCCTCCTCAAGACCTGAGACTGGGC...CCCCATACTGTCTCCAAGAGCAATTCTGTCAGGAGAGGGAATTGAACCACGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | AATTCGGTCTTTGGCATCCTCTGGAATGTGTGCTGTCTTCAGGTGTaGGTCCCCAGAGAGTATTTGCAGATCTGCCCCCAGCATCTCAGC | + |
Preference number: 5 (lower is better) Translates to: NSVFGILWNVCCLQV*VPREYLQICPQHLS Trigger: GCTGAGATGCTGGGGGCAGATCTGCAAATACTCTCTGGGGACCCACACCTGAAGACAGCACACATTCCAGAGGATGCCAAAGACCGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTAGCTTGGCAGCCATCTaGGCCCCCAATTCAGGGGAT | + |
Preference number: 5 (lower is better) Translates to: QVEGNVDLCPITLPFTCGSLAAI*APNSGD Trigger: ATCCCCTGAATTGGGGGCCAAGATGGCTGCCAAGCT...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 90 bp | AGGCACGATTCCAGGAATTCGGTCTTTGGCATCCTCTGGAATGTGTaGTGTCTTCAGGTGTGGGTCCCCAGAGAGTATTTGCAGATCTGC | + |
Preference number: 5 (lower is better) Translates to: RHDSRNSVFGILWNV*CLQVWVPREYLQIC Trigger: GCAGATCTGCAAATACTCTCTGGGGACCCACACCTGAAGACAGCACACATTCCAGAGGATGCCAAAGACCGAATTCCTGGAATCGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | CTGAGTACCAGAAACACACAGATGTTCAGTAACCCCAGACTACACACTGAATTTGGTGAGCACTGGTGCTaGCTGGGGAGCCTCGAGGGT | + |
Preference number: 5 (lower is better) Translates to: LSTRNTQMFSNPRLHTEFGEHWC*LGSLEG Trigger: ACCCTCGAGGCTCCCCAGCAAGCACCAGTGCTCACC...AAATTCAGTGTGTAGTCTGGGGTTACTGAACATCTGTGTGTTTCTGGTACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | GGGAGGTGGGAAGGGCAGGGATTCCTGGAATTTAAGTGCTTAAGCCCTGTAGAGACTGTGAGGAAGAAGTaGGACTGGCCTATTCTCAGC | + |
Preference number: 5 (lower is better) Translates to: GRWEGQGFLEFKCLSPVETVRKK*DWPILS Trigger: GCTGAGAATAGGCCAGTCCAACTTCTTCCTCACAGT...CTCTACAGGGCTTAAGCACTTAAATTCCAGGAATCCCTGCCCTTCCCACCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | ATCCGTGGTTCAATTCCCTCTCCTGACAGAATTGCTCTTGGAGACAGTATGGGGCTTCTGAAGTCACCCTaGCATAGCGGCTCTGCAGAC | + |
Preference number: 5 (lower is better) Translates to: IRGSIPSPDRIALGDSMGLLKSP*HSGSAD Trigger: GTCTGCAGAGCCGCTATGCAAGGGTGACTTCAGAAG...CCCCATACTGTCTCCAAGAGCAATTCTGTCAGGAGAGGGAATTGAACCACGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | GGTCTGAGATGCCCAGAATCTCGTGACTCTTCATCGCCTGCTCAATaGCTGCTTGCATTCCCATCAGGTTCTCAGGGAAGCAGTAGTTAT | + |
Preference number: 5 (lower is better) Translates to: GLRCPESRDSSSPAQ*LLAFPSGSQGSSSY Trigger: ATAACTACTGCTTCCCTGAGAACCTGATGGGAATGCAAGCAGCCATTGAGCAGGCGATGAAGAGTCACGAGATTCTGGGCATCTCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | TGTGGGGCTGTGTTATCTTTGGAGAGCTTTGCCACTTTATTAGGCCCTGAGCAGAGGACCACCACATCCTaGTCAGCACTGTATCTCTCC | + |
Preference number: 5 (lower is better) Translates to: CGAVLSLESFATLLGPEQRTTTS*SALYLS Trigger: GGAGAGATACAGTGCTGACAAGGATGTGGTGGTCCT...CTGCTCAGGGCCTAATAAAGTGGCAAAGCTCTCCAAAGATAACACAGCCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | CAGGTGGAGGGCAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTTGCTGGAGTATCTCCTaGGCTCTGGTAAGGGCCAAT | + |
Preference number: 5 (lower is better) Translates to: QVEGNVDLCPITLPFTCGCWSIS*ALVRAN Trigger: ATTGGCCCTTACCAGAGCCAAGGAGATACTCCAGCA...ACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTGCCCTCCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 90 bp | AATCTGCATAGGCACGATTCCAGGAATTCGGTCTTTGGCATCCTCTaGAATGTGTGCTGTCTTCAGGTGTGGGTCCCCAGAGAGTATTTG | + |
Preference number: 5 (lower is better) Translates to: NLHRHDSRNSVFGIL*NVCCLQVWVPREYL Trigger: CAAATACTCTCTGGGGACCCACACCTGAAGACAGCACACATTCCAGAGGATGCCAAAGACCGAATTCCTGGAATCGTGCCTATGCAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | CTGAGTACCAGAAACACACAGATGTTCAGTAACCCCAGACTACACACTGAATTTGTCCCCAGAGAGTATTaGCAGATCTGCCCCCAGCAT | + |
Preference number: 5 (lower is better) Translates to: LSTRNTQMFSNPRLHTEFVPREY*QICPQH Trigger: ATGCTGGGGGCAGATCTGCAAATACTCTCTGGGGAC...AAATTCAGTGTGTAGTCTGGGGTTACTGAACATCTGTGTGTTTCTGGTACTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCTATCCAGTACCAGGCTaGGCTGGAAGAGGTGCGTGG | + |
Preference number: 5 (lower is better) Translates to: KLVYKVVGTSCMNSRAPAYPVPG*AGRGAW Trigger: CCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATA...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTATCCAGCTGTCAGCACTaGGGCCAGCGTCTGAGGGTC | + |
Preference number: 5 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVSSCQH*GQRLRV Trigger: GACCCTCAGACGCTGGCCCAAGTGCTGACAGCTGGA...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | CAATGTAGACCTGTGTCCTATTACTCTGCCATTCACATGTGGTGTCTACACATTTTATCCAGGAGGATCTaGGCCATATCCAGTACCAGG | + |
Preference number: 5 (lower is better) Translates to: QCRPVSYYSAIHMWCLHILSRRI*AISSTR Trigger: CCTGGTACTGGATATGGCCAAGATCCTCCTGGATAA...AATGTGTAGACACCACATGTGAATGGCAGAGTAATAGGACACAGGTCTACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCCTGCTCAATGGCTGCTaGCATTCCCATCAGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: KLVYKVVGTSCMNSRAPALLNGC*HSHQVL Trigger: GAGAACCTGATGGGAATGCAAGCAGCCATTGAGCAG...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | AAATTAGTTTATAAGGTAGTGGGAACAAGTTGTATGAATTCTAGGGCACCAGCCCAGGCCTCACCGTGGTaGTCAATAAAAGTAAGTACC | + |
Preference number: 5 (lower is better) Translates to: KLVYKVVGTSCMNSRAPAQASPW*SIKVST Trigger: GGTACTTACTTTTATTGACAACCACGGTGAGGCCTG...GGCTGGTGCCCTAGAATTCATACAACTTGTTCCCACTACCTTATAAACTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS-3UTR CAA 90 bp | GATTTTTACTCTAGCATAGGCTTGTTCAGGTATTTCATGCATTTTGACCTAGTAGTGTGGAAGGAAAACTaGATCAGGTCTTCAAAGACT | + |
Preference number: 5 (lower is better) Translates to: DFYSSIGLFRYFMHFDLVVWKEN*IRSSKT Trigger: AGTCTTTGAAGACCTGATCAAGTTTTCCTTCCACAC...TACTAGGTCAAAATGCATGAAATACCTGAACAAGCCTATGCTAGAGTAAAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | TGTGAGCGCCAGGCCACCCTGGGGCGAGTCCAGCAGTaGCACCGTGCAGGTGTGGAGCAGGCTACCCGCGGT | + |
Preference number: 6 (lower is better) Translates to: CERQATLGRVQQ*HRAGVEQATRG Trigger: ACCGCGGGTAGCCTGCTCCACACCTGCACGGTGCCACTGCTGGACTCGCCCCAGGGTGGCCTGGCGCTCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCAGGGCCCCACCCTCCGTCCGCTCGCCCACCACGATaGCGCGCCGCATCTGCTTCAGGATGTAGGCAATGT | + |
Preference number: 6 (lower is better) Translates to: PGPHPPSARPPR*RAASASGCRQC Trigger: ACATTGCCTACATCCTGAAGCAGATGCGGCGCGCCATCGTGGTGGGCGAGCGGACGGAGGGTGGGGCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GTCCTGGAGGGCTTCCTGAAGTCGGAGGACAACCCCTaGCAGGGCACGACGCAGGGTGAGGATGGCCAGGGC | + |
Preference number: 6 (lower is better) Translates to: VLEGFLKSEDNP*QGTTQGEDGQG Trigger: GCCCTGGCCATCCTCACCCTGCGTCGTGCCCTGCCAGGGGTTGTCCTCCGACTTCAGGAAGCCCTCCAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCCTGGGGCGAGTCCAGCAGTGGCACCGTGCAGGTGTaGAGCAGGCTACCCGCGGTGATTTCGCCGACCAGT | + |
Preference number: 6 (lower is better) Translates to: PWGESSSGTVQV*SRLPAVISPTS Trigger: ACTGGTCGGCGAAATCACCGCGGGTAGCCTGCTCCACACCTGCACGGTGCCACTGCTGGACTCGCCCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | CTGGCCGGGCATAGTGAGCCTCCAGCAGGCGACCCGTaGCCTCTACCAAGGCGCCCAGACTGCGATGGAAGT | + |
Preference number: 6 (lower is better) Translates to: LAGHSEPPAGDP*PLPRRPDCDGS Trigger: ACTTCCATCGCAGTCTGGGCGCCTTGGTAGAGGGCACGGGTCGCCTGCTGGAGGCTCACTATGCCCGGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | GCTCTGCAGGGGTCCCCACACAAGGCAGCACGCCACTaGCTTCCCATGTCTGGCCACCTCCACCTAGAGGTC | + |
Preference number: 6 (lower is better) Translates to: ALQGSPHKAARH*LPMSGHLHLEV Trigger: GACCTCTAGGTGGAGGTGGCCAGACATGGGAAGGCAGTGGCGTGCTGCCTTGTGTGGGGACCCCTGCAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCCACACAAGGCAGCACGCCACTGCCTTCCCATGTCTaGCCACCTCCACCTAGAGGTCCCAGGGACCTGGAC | + |
Preference number: 6 (lower is better) Translates to: PTQGSTPLPSHV*PPPPRGPRDLD Trigger: GTCCAGGTCCCTGGGACCTCTAGGTGGAGGTGGCCAGACATGGGAAGGCAGTGGCGTGCTGCCTTGTGTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | AGATTGCAGGAGAGCTCTGGCCCGCTGTGCGATCTCTaGCCGGGCATAGTGAGCCTCCAGCAGGCGACCCGT | + |
Preference number: 6 (lower is better) Translates to: RLQESSGPLCDL*PGIVSLQQATR Trigger: ACGGGTCGCCTGCTGGAGGCTCACTATGCCCGGCCAGAGATCGCACAGCGGGCCAGAGCTCTCCTGCAATCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GGCCAGCAGTTCTTCTCGGGTGAGGTTGGTGAGCACTaGTGCTTGCTGGGGAGCCTCGAGGGTACTGGGCTC | + |
Preference number: 6 (lower is better) Translates to: GQQFFSGEVGEH*CLLGSLEGTGL Trigger: GAGCCCAGTACCCTCGAGGCTCCCCAGCAAGCACCAGTGCTCACCAACCTCACCCGAGAAGAACTGCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCCCGAGGACCTCGGGCAAGGTCCAGATCTCTGTGGTaGTGTTGGAGGGCCGATCGTAGACGGTGTCCACGT | + |
Preference number: 6 (lower is better) Translates to: PRGPRARSRSLW*CWRADRRRCPR Trigger: ACGTGGACACCGTCTACGATCGGCCCTCCAACACCACCACAGAGATCTGGACCTTGCCCGAGGTCCTCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GTGAGGAAGAAGTTGGACTGGCCTATTCTCAGCTTCTaGAGGTCCAGGGCCCCACCCTCCGTCCGCTCGCCC | + |
Preference number: 6 (lower is better) Translates to: VRKKLDWPILSF*RSRAPPSVRSP Trigger: GGGCGAGCGGACGGAGGGTGGGGCCCTGGACCTCCAGAAGCTGAGAATAGGCCAGTCCAACTTCTTCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GGTCCTCTTCAGAGACCACAGCTGAGTAGTCCATGCTaGCCAGGTGGTGCAGCAGGCCCGGCACTCGGTCCA | + |
Preference number: 6 (lower is better) Translates to: GPLQRPQLSSPC*PGGAAGPALGP Trigger: TGGACCGAGTGCCGGGCCTGCTGCACCACCTGGCCAGCATGGACTACTCAGCTGTGGTCTCTGAAGAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CAGTCTCAGGTCTTGAGGAGGAGTCTCTGGGTCCGGTaGCCCTCACCAGGAGCCTGGGATCCTCCGACACAG | + |
Preference number: 6 (lower is better) Translates to: QSQVLRRSLWVR*PSPGAWDPPTQ Trigger: CTGTGTCGGAGGATCCCAGGCTCCTGGTGAGGGCCACCGGACCCAGAGACTCCTCCTCAAGACCTGAGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 72 bp | CCCCCAGTGTGTCCGCTGGTGAGGACCACCACATCCTaGTCAGCACTGTATCTCTCCCCGAGGACCTCGGGC | + |
Preference number: 6 (lower is better) Translates to: PPVCPLVRTTTS*SALYLSPRTSG Trigger: GCCCGAGGTCCTCGGGGAGAGATACAGTGCTGACAAGGATGTGGTGGTCCTCACCAGCGGACACACTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 90 bp | TCTGCGACTCCCCCAGTGTGTCCGCTGGTGAGGACCACCACATCCTaGTCAGCACTGTATCTCTCCCCGAGGACCTCGGGCAAGGTCCAG | + |
Preference number: 6 (lower is better) Translates to: SATPPVCPLVRTTTS*SALYLSPRTSGKVQ Trigger: CTGGACCTTGCCCGAGGTCCTCGGGGAGAGATACAGTGCTGACAAGGATGTGGTGGTCCTCACCAGCGGACACACTGGGGGAGTCGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | ACCAGAGGCATCGCCGAGGACGGACCCCCAGGGTTATaGCGCAGGTCCATGATGAGGTGTTCCGTGTCCTGC | + |
Preference number: 6 (lower is better) Translates to: TRGIAEDGPPGL*RRSMMRCSVSC Trigger: GCAGGACACGGAACACCTCATCATGGACCTGCGTCATAACCCTGGGGGTCCGTCCTCGGCGATGCCTCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | TCCCAGGCCTCACCGGTGCTGGCACTCAGGGCCATCTaGGTAGGCATGGAGGCATATAAGGGGCTGTTGCCC | + |
Preference number: 6 (lower is better) Translates to: SQASPVLALRAI*VGMEAYKGLLP Trigger: GGGCAACAGCCCCTTATATGCCTCCATGCCTACTCAGATGGCCCTGAGTGCCAGCACCGGTGAGGCCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | GCGCCGCATCTGCTTCAGGATGTAGGCAATGTCCTCTaGGACTCCCCCAGTGTGTCCGCTGGTGAGGACCAC | + |
Preference number: 6 (lower is better) Translates to: APHLLQDVGNVL*DSPSVSAGEDH Trigger: GTGGTCCTCACCAGCGGACACACTGGGGGAGTCGCAGAGGACATTGCCTACATCCTGAAGCAGATGCGGCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | TGGAGGCATATAAGGGGCTGTTGCCCACCTGGTAGATaGCCACGGAGAGTGCCCCTCCAGCTGTGGGCTCTC | + |
Preference number: 6 (lower is better) Translates to: WRHIRGCCPPGR*PRRVPLQLWAL Trigger: GAGAGCCCACAGCTGGAGGGGCACTCTCCGTGGGCATCTACCAGGTGGGCAACAGCCCCTTATATGCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | TCTCCCCGAGGACCTCGGGCAAGGTCCAGATCTCTGTaGTGGTGTTGGAGGGCCGATCGTAGACGGTGTCCA | + |
Preference number: 6 (lower is better) Translates to: SPRGPRARSRSL*WCWRADRRRCP Trigger: TGGACACCGTCTACGATCGGCCCTCCAACACCACCACAGAGATCTGGACCTTGCCCGAGGTCCTCGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 90 bp | CCTAGAGGTCCCAGGGACCTGGACACAGGCACTGTGAGGAAGAAGTaGGACTGGCCTATTCTCAGCTTCTGGAGGTCCAGGGCCCCACCC | + |
Preference number: 6 (lower is better) Translates to: PRGPRDLDTGTVRKK*DWPILSFWRSRAPP Trigger: GGGTGGGGCCCTGGACCTCCAGAAGCTGAGAATAGGCCAGTCCAACTTCTTCCTCACAGTGCCTGTGTCCAGGTCCCTGGGACCTCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 90 bp | CTCCAAGTCCACAGCTGTGCGGTAGGCTCCTTGGGCCAACTTAGATaGCAGGAGAGCTCTGGCCCGCTGTGCGATCTCTGGCCGGGCATA | + |
Preference number: 6 (lower is better) Translates to: LQVHSCAVGSLGQLR*QESSGPLCDLWPGI Trigger: TATGCCCGGCCAGAGATCGCACAGCGGGCCAGAGCTCTCCTGCAATCTAAGTTGGCCCAAGGAGCCTACCGCACAGCTGTGGACTTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | CCTGGGCTGTGGAAAGGGCCTCACTCATGGGCACAGTaGTGTCAGGTTCCACACCAGCCAAGTCCCAGGCCT | + |
Preference number: 6 (lower is better) Translates to: PGLWKGPHSWAQ*CQVPHQPSPRP Trigger: AGGCCTGGGACTTGGCTGGTGTGGAACCTGACATCACTGTGCCCATGAGTGAGGCCCTTTCCACAGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | CAGATCTGCCCCCAGCATCTCAGCCAAGGCCCCTTCTaGAGTCACCCTTGCATAGCGGCTCTGCAGACCGCT | + |
Preference number: 6 (lower is better) Translates to: QICPQHLSQGPF*SHPCIAALQTA Trigger: AGCGGTCTGCAGAGCCGCTATGCAAGGGTGACTTCAGAAGGGGCCTTGGCTGAGATGCTGGGGGCAGATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | TTGGCCATATCCAGTACCAGGCTTGGCTGGAAGAGGTaGGTGGGACCAGCCGGAACCCAGAGCAGTGTGGAC | + |
Preference number: 6 (lower is better) Translates to: LAISSTRLGWKR*VGPAGTQSSVD Trigger: GTCCACACTGCTCTGGGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | CAGCAGTTCTTCTCGGGTGAGGTTGGTGAGCACTGGTaGTTGCTGGGGAGCCTCGAGGGTACTGGGCTCGTA | + |
Preference number: 6 (lower is better) Translates to: QQFFSGEVGEHW*LLGSLEGTGLV Trigger: TACGAGCCCAGTACCCTCGAGGCTCCCCAGCAAGCACCAGTGCTCACCAACCTCACCCGAGAAGAACTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | GCCCTCACCAGGAGCCTGGGATCCTCCGACACAGCCTaGAAGCCAGCATTGAGCTTTGTCACCAGGTCCTCT | + |
Preference number: 6 (lower is better) Translates to: ALTRSLGSSDTA*KPALSFVTRSS Trigger: AGAGGACCTGGTGACAAAGCTCAATGCTGGCTTGCAGGCTGTGTCGGAGGATCCCAGGCTCCTGGTGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | AGGAGGATCTTGGCCATATCCAGTACCAGGCTTGGCTaGAAGAGGTGCGTGGGACCAGCCGGAACCCAGAGC | + |
Preference number: 6 (lower is better) Translates to: RRILAISSTRLG*KRCVGPAGTQS Trigger: GCTCTGGGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAAGATCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | AGAGGGACCTCCTCTGCCACAAGCTCCCCAGGGCTATaGAATACCAGCAGGCGGTGGTCCTCAGATACCTCC | + |
Preference number: 6 (lower is better) Translates to: RGTSSATSSPGL*NTSRRWSSDTS Trigger: GGAGGTATCTGAGGACCACCGCCTGCTGGTATTCCATAGCCCTGGGGAGCTTGTGGCAGAGGAGGTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCTCGGCGGCACCGGCTGTCACACCACTGGTCAGGATaGCTACGCTCTTCTTGGAGCCATATCGTTCACCTG | + |
Preference number: 6 (lower is better) Translates to: PRRHRLSHHWSG*LRSSWSHIVHL Trigger: CAGGTGAACGATATGGCTCCAAGAAGAGCGTAGCCATCCTGACCAGTGGTGTGACAGCCGGTGCCGCCGAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 72 bp | CACAGCTGTGCGGTAGGCTCCTTGGGCCAACTTAGATaGCAGGAGAGCTCTGGCCCGCTGTGCGATCTCTGG | + |
Preference number: 6 (lower is better) Translates to: HSCAVGSLGQLR*QESSGPLCDLW Trigger: CCAGAGATCGCACAGCGGGCCAGAGCTCTCCTGCAATCTAAGTTGGCCCAAGGAGCCTACCGCACAGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 90 bp | GGTGATGTAGAGATGGGTGTCATCCACGTGGTAGGTCTGCGGTGGTaGGCAACCTCCACTTGTCACTTCACCGATGACCAGGGCCCGGCC | + |
Preference number: 6 (lower is better) Translates to: GDVEMGVIHVVGLRW*ATSTCHFTDDQGPA Trigger: GGCCGGGCCCTGGTCATCGGTGAAGTGACAAGTGGAGGTTGCCAACCACCGCAGACCTACCACGTGGATGACACCCATCTCTACATCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | CCTATAACGGTGGCCCGCTGTAGGTCCTGCATAGTGTaGGCAAAGGCCTCGGCTGCAGAGCCACTAGTGTGG | + |
Preference number: 6 (lower is better) Translates to: PITVARCRSCIV*AKASAAEPLVW Trigger: CCACACTAGTGGCTCTGCAGCCGAGGCCTTTGCTCACACTATGCAGGACCTACAGCGGGCCACCGTTATAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | GGCCAGGGAGGTCGTCCACTCGTAGGTAGCCCACGTTaGCCTCAAGAACCTCATGGCGGATGTTCCTCTGTA | + |
Preference number: 6 (lower is better) Translates to: GQGGRPLVGSPR*PQEPHGGCSSV Trigger: TACAGAGGAACATCCGCCATGAGGTTCTTGAGGGCAACGTGGGCTACCTACGAGTGGACGACCTCCCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | CACGTAAGGGCCCAGCGTCTCCAGCACAGCGGCGTCTaGAAATCTATCAAAGCGCAGGTAGCCCACATTGCC | + |
Preference number: 6 (lower is better) Translates to: HVRAQRLQHSGV*KSIKAQVAHIA Trigger: GGCAATGTGGGCTACCTGCGCTTTGATAGATTTGCAGACGCCGCTGTGCTGGAGACGCTGGGCCCTTACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | ACAGTGGGCACCTTAGCACGCAGGACCACTATGTCCTaGGCTGTGGAAAGGGCCTCACTCATGGGCACAGTG | + |
Preference number: 6 (lower is better) Translates to: TVGTLARRTTMS*AVERASLMGTV Trigger: CACTGTGCCCATGAGTGAGGCCCTTTCCACAGCCCAGGACATAGTGGTCCTGCGTGCTAAGGTGCCCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 72 bp | CAGTTCTTCTCGGGTGAGGTTGGTGAGCACTGGTGCTaGCTGGGGAGCCTCGAGGGTACTGGGCTCGTAAGA | + |
Preference number: 6 (lower is better) Translates to: QFFSGEVGEHWC*LGSLEGTGLVR Trigger: TCTTACGAGCCCAGTACCCTCGAGGCTCCCCAGCAAGCACCAGTGCTCACCAACCTCACCCGAGAAGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | TCCAGCTGTCAGCACTTGGGCCAGCGTCTGAGGGTCTaGGATGCCCAGAATCTCGTGACTCTTCATCGCCTG | + |
Preference number: 6 (lower is better) Translates to: SSCQHLGQRLRV*DAQNLVTLHRL Trigger: CAGGCGATGAAGAGTCACGAGATTCTGGGCATCTCAGACCCTCAGACGCTGGCCCAAGTGCTGACAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCATATCCAGTACCAGGCTTGGCTGGAAGAGGTGCGTaGGACCAGCCGGAACCCAGAGCAGTGTGGACAAAA | + |
Preference number: 6 (lower is better) Translates to: PYPVPGLAGRGA*DQPEPRAVWTK Trigger: TTTTGTCCACACTGCTCTGGGTTCCGGCTGGTCCCACGCACCTCTTCCAGCCAAGCCTGGTACTGGATATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GACCTGGACACAGGCACTGTGAGGAAGAAGTTGGACTaGCCTATTCTCAGCTTCTGGAGGTCCAGGGCCCCA | + |
Preference number: 6 (lower is better) Translates to: DLDTGTVRKKLD*PILSFWRSRAP Trigger: TGGGGCCCTGGACCTCCAGAAGCTGAGAATAGGCCAGTCCAACTTCTTCCTCACAGTGCCTGTGTCCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GAGGCCCAATGGCCTTTACTGTCTCTAGCTCAGCCATaGCGTCAAAACGCAAGTAGCCGAGCTGGCCGGGTA | + |
Preference number: 6 (lower is better) Translates to: EAQWPLLSLAQP*RQNASSRAGRV Trigger: TACCCGGCCAGCTCGGCTACTTGCGTTTTGACGCCATGGCTGAGCTAGAGACAGTAAAGGCCATTGGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | CAATGTCCTCTGCGACTCCCCCAGTGTGTCCGCTGGTaGGGACCACCACATCCTTGTCAGCACTGTATCTCT | + |
Preference number: 6 (lower is better) Translates to: QCPLRLPQCVRW*GPPHPCQHCIS Trigger: AGAGATACAGTGCTGACAAGGATGTGGTGGTCCTCACCAGCGGACACACTGGGGGAGTCGCAGAGGACATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | CTGTCAGCACTTGGGCCAGCGTCTGAGGGTCTGAGATaGCCAGAATCTCGTGACTCTTCATCGCCTGCTCAA | + |
Preference number: 6 (lower is better) Translates to: LSALGPASEGLR*PESRDSSSPAQ Trigger: TTGAGCAGGCGATGAAGAGTCACGAGATTCTGGGCATCTCAGACCCTCAGACGCTGGCCCAAGTGCTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | CCCTCAAGAACCTCATGGCGGATGTTCCTCTGTATCTaGGCCAGCAGTTCTTCTCGGGTGAGGTTGGTGAGC | + |
Preference number: 6 (lower is better) Translates to: PSRTSWRMFLCI*ASSSSRVRLVS Trigger: GCTCACCAACCTCACCCGAGAAGAACTGCTGGCCCAGATACAGAGGAACATCCGCCATGAGGTTCTTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GCCTCTGCCACACCAGCTGTACTAGCTGAGGCCCAATaGCCTTTACTGTCTCTAGCTCAGCCATGGCGTCAA | + |
Preference number: 6 (lower is better) Translates to: ASATPAVLAEAQ*PLLSLAQPWRQ Trigger: TTGACGCCATGGCTGAGCTAGAGACAGTAAAGGCCATTGGGCCTCAGCTAGTACAGCTGGTGTGGCAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 72 bp | CACAAGGCTGAGATGGAGGAGGTGGGGCCGCCAAGGTaGAACCTCATGTCGATGATCAGGGCATCAGTGTGT | + |
Preference number: 6 (lower is better) Translates to: HKAEMEEVGPPR*NLMSMIRASVC Trigger: ACACACTGATGCCCTGATCATCGACATGAGGTTCAACCTTGGCGGCCCCACCTCCTCCATCTCAGCCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 72 bp | GAGATGGGTGTCATCCACGTGGTAGGTCTGCGGTGGTaGGCAACCTCCACTTGTCACTTCACCGATGACCAG | + |
Preference number: 6 (lower is better) Translates to: EMGVIHVVGLRW*ATSTCHFTDDQ Trigger: CTGGTCATCGGTGAAGTGACAAGTGGAGGTTGCCAACCACCGCAGACCTACCACGTGGATGACACCCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | CGTCTGCAAATCTATCAAAGCGCAGGTAGCCCACATTaGCCGGCAGCACGGACACCTGAAACACAGAGTCCA | + |
Preference number: 6 (lower is better) Translates to: RLQIYQSAGSPH*PAARTPETQSP Trigger: TGGACTCTGTGTTTCAGGTGTCCGTGCTGCCGGGCAATGTGGGCTACCTGCGCTTTGATAGATTTGCAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | AGGAAGGCAAACTCTTCGGCAGCTGTGGCAGTCCTGTaGCTAGTAAGCAGGTACACTCCACGCTGGTTACCA | + |
Preference number: 6 (lower is better) Translates to: RKANSSAAVAVL*LVSRYTPRWLP Trigger: TGGTAACCAGCGTGGAGTGTACCTGCTTACTAGCCACAGGACTGCCACAGCTGCCGAAGAGTTTGCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GTAGAGATGGGTGTCATCCACGTGGTAGGTCTGCGGTaGTTGGCAACCTCCACTTGTCACTTCACCGATGAC | + |
Preference number: 6 (lower is better) Translates to: VEMGVIHVVGLR*LATSTCHFTDD Trigger: GTCATCGGTGAAGTGACAAGTGGAGGTTGCCAACCACCGCAGACCTACCACGTGGATGACACCCATCTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | AATAGGAGCAGAGTAGAGGAACGGCAGAAGAGTAGCTaGCAGGGTTGTAGCGCAGGTCAACAATCAGCGCAG | + |
Preference number: 6 (lower is better) Translates to: NRSRVEERQKSS*QGCSAGQQSAQ Trigger: CTGCGCTGATTGTTGACCTGCGCTACAACCCTGGCAGCTACTCTTCTGCCGTTCCTCTACTCTGCTCCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | TTCTTCCAGATGTGTTCTACCAGCAGCTCGGAGACCTaGGTAAGCAGCTCGCAGTCCCCGAACATGTCGAAT | + |
Preference number: 6 (lower is better) Translates to: FFQMCSTSSSET*VSSSQSPNMSN Trigger: ATTCGACATGTTCGGGGACTGCGAGCTGCTTACCCAGGTCTCCGAGCTGCTGGTAGAACACATCTGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS TCA 72 bp | ACGCTCTTCTTGGAGCCATATCGTTCACCTGTGAGCTaGGTGTGGGTCCAAAGTTCGCTGACCGAGTCATTG | + |
Preference number: 6 (lower is better) Translates to: TLFLEPYRSPVS*VWVQSSLTESL Trigger: CAATGACTCGGTCAGCGAACTTTGGACCCACACTCAGCTCACAGGTGAACGATATGGCTCCAAGAAGAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GGTTCTCAGGGAAGCAGTAGTTATCCAGGAGGATCTTaGCCATATCCAGTACCAGGCTTGGCTGGAAGAGGT | + |
Preference number: 6 (lower is better) Translates to: GSQGSSSYPGGS*PYPVPGLAGRG Trigger: ACCTCTTCCAGCCAAGCCTGGTACTGGATATGGCCAAGATCCTCCTGGATAACTACTGCTTCCCTGAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 90 bp | GATGCCCAGAATCTCGTGACTCTTCATCGCCTGCTCAATGGCTGCTaGCATTCCCATCAGGTTCTCAGGGAAGCAGTAGTTATCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: DAQNLVTLHRLLNGC*HSHQVLREAVVIQE Trigger: CTCCTGGATAACTACTGCTTCCCTGAGAACCTGATGGGAATGCAAGCAGCCATTGAGCAGGCGATGAAGAGTCACGAGATTCTGGGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS GCA 72 bp | CAGAATCTCGTGACTCTTCATCGCCTGCTCAATGGCTaGTTGCATTCCCATCAGGTTCTCAGGGAAGCAGTA | + |
Preference number: 6 (lower is better) Translates to: QNLVTLHRLLNG*LHSHQVLREAV Trigger: TACTGCTTCCCTGAGAACCTGATGGGAATGCAAGCAGCCATTGAGCAGGCGATGAAGAGTCACGAGATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | AGTCATTGGGCCGGTTGTAGATCTTGTCCAGCAGAATaGGAGGTGCCTCGTCAAAGAAGTAAGAGCACAAGG | + |
Preference number: 6 (lower is better) Translates to: SHWAGCRSCPAE*EVPRQRSKSTR Trigger: CCTTGTGCTCTTACTTCTTTGACGAGGCACCTCCCATTCTGCTGGACAAGATCTACAACCGGCCCAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CCA 72 bp | GTGGAAGGAAAACTTGATCAGGTCTTCAAAGACTTCTaGGGAGGGAATCTGCATAGGCACGATTCCAGGAAT | + |
Preference number: 6 (lower is better) Translates to: VEGKLDQVFKDF*GGNLHRHDSRN Trigger: ATTCCTGGAATCGTGCCTATGCAGATTCCCTCCCCAGAAGTCTTTGAAGACCTGATCAAGTTTTCCTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |
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CDS CAA 72 bp | ATGTTGTCCTCAAGGACATTTGTGTGGAAGGAAAACTaGATCAGGTCTTCAAAGACTTCTGGGGAGGGAATC | + |
Preference number: 6 (lower is better) Translates to: MLSSRTFVWKEN*IRSSKTSGEGI Trigger: GATTCCCTCCCCAGAAGTCTTTGAAGACCTGATCAAGTTTTCCTTCCACACAAATGTCCTTGAGGACAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035695.10 |