Pregenerated sensors for RBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032454Ensembl transcript IDs: ENSMUST00000035029.3, ENSMUST00000187905.7, ENSMUST00000189446.7
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTAAGGGGGCTCTGTCAGGAATGGGAGGAGTCCCCATGCTGCTTTaGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGT | + |
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Preference number: 1 (lower is better) Translates to: CKGALSGMGGVPMLL*GTGRELCTCSRLSR Trigger: ACGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTCCCATTCCTGACAGAGCCCCCTTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035029.3 ENSMUST00000189446.7 |
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| 3UTR TCA 72 bp | GTTCCTTTTATACACTCCAGTTTAAACCCAGGCAGATaGTGTAAGGGGGCTCTGTCAGGAATGGGAGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: VPFIHSSLNPGR*CKGALSGMGGV Trigger: GACTCCTCCCATTCCTGACAGAGCCCCCTTACATCATCTGCCTGGGTTTAAACTGGAGTGTATAAAAGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035029.3 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | GGGCTCTGTCAGGAATGGGAGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGCTGAGTCAGACGCACTaGGATCTTGCGGGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GLCQEWEESPCCFGELAELSQTH*DLAGGK Trigger: TTTGCCACCCGCAAGATCGCAGTGCGTCTGACTCAG...CTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTCCCATTCCTGACAGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035029.3 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | GGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGTCTCCCTCCACCCACTaGTTCCAGCCACGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GVPMLLWGTGRELCTCSRSPSTH*FQPRFS Trigger: GGAGAACCGTGGCTGGAAGCAGTGGGTGGAGGGAGA...CCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CCA 90 bp | AATGGGAGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGACTTGTCGGCACACCTaGTCGCCGCAGGTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NGRSPHAALGNWQRTLHMTCRHT*SPQVSS Trigger: GGAGCTGACCTGCGGCGACCAGGTGTGCCGACAAGT...CATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTCCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035029.3 ENSMUST00000189446.7 |
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| CDS-3UTR CCA 90 bp | TGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGTGACTTGTCGGCACACCTaGTCGCCGCAGGTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CCFGELAENSAHVPGFPVTCRHT*SPQVSS Trigger: GGAGCTGACCTGCGGCGACCAGGTGTGCCGACAAGT...CACGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CCA 90 bp | CCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCACTTGTCGGCACACCTaGTCGCCGCAGGTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PMLLWGTGRELCTCSRLSTCRHT*SPQVSS Trigger: GGAGCTGACCTGCGGCGACCAGGTGTGCCGACAAGT...GGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | CCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCTCTCCCTCCACCCACTaGTTCCAGCCACGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PCCFGELAENSAHVPGFPSPSTH*FQPRFS Trigger: GGAGAACCGTGGCTGGAAGCAGTGGGTGGAGGGAGA...GGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | AGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGTCTCCCTCCACCCACTaGTTCCAGCCACGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSPHAALGNWQRTLHMFQSPSTH*FQPRFS Trigger: GGAGAACCGTGGCTGGAAGCAGTGGGTGGAGGGAGA...CTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | ATGGGAGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTCTGAGTCAGACGCACTaGGATCTTGCGGGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: MGGVPMLLWGTGRELCTCLSQTH*DLAGGK Trigger: TTTGCCACCCGCAAGATCGCAGTGCGTCTGACTCAG...ACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | CCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCCTGAGTCAGACGCACTaGGATCTTGCGGGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PCCFGELAENSAHVPGFPLSQTH*DLAGGK Trigger: TTTGCCACCCGCAAGATCGCAGTGCGTCTGACTCAG...GGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | AGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTCCTTCTCCCCTTTCTaGACACACACGAGGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SPHAALGNWQRTLHMFQASFSPF*THTRVL Trigger: CAACACCCTCGTGTGTGTGCAGAAAGGGGAGAAGGA...AGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | AGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGTCCTTCTCCCCTTTCTaGACACACACGAGGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RSPHAALGNWQRTLHMFQSFSPF*THTRVL Trigger: CAACACCCTCGTGTGTGTGCAGAAAGGGGAGAAGGA...CTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | GGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGGACGCACTGCGATCTTaGGGGTGGCAAAATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: GVPMLLWGTGRELCTCSRDALRS*GWQNQY Trigger: ATATTGATTTTGCCACCCGCAAGATCGCAGTGCGTC...CCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR GCA 90 bp | TGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGTGGACGCACTGCGATCTTaGGGGTGGCAAAATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: CCFGELAENSAHVPGFPVDALRS*GWQNQY Trigger: ATATTGATTTTGCCACCCGCAAGATCGCAGTGCGTC...CACGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | GGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGACACACACGAGGGTGTaGCCTTCCCAGGTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: GVPMLLWGTGRELCTCSRTHTRV*PSQVTR Trigger: CCTGGTCACCTGGGAAGGCAACACCCTCGTGTGTGT...CCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | CCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCACACACACGAGGGTGTaGCCTTCCCAGGTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: PHAALGNWQRTLHMFQAFTHTRV*PSQVTR Trigger: CCTGGTCACCTGGGAAGGCAACACCCTCGTGTGTGT...GAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | TGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGTGACACACACGAGGGTGTaGCCTTCCCAGGTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: CCFGELAENSAHVPGFPVTHTRV*PSQVTR Trigger: CCTGGTCACCTGGGAAGGCAACACCCTCGTGTGTGT...CACGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS TCA 90 bp | GGCCGTCCAGGCCCTTTGTGTGTTCGTCAAACTCCACCCCGACGGTaGAATCCAGGTCGTAGTTGCGGAACGTGCTGTTGGTTTTCGTCT | + |
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Preference number: 5 (lower is better) Translates to: GRPGPLCVRQTPPRR*NPGRSCGTCCWFSS Trigger: AGACGAAAACCAACAGCACGTTCCGCAACTACGACCTGGATTTCACCGTCGGGGTGGAGTTTGACGAACACACAAAGGGCCTGGACGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | TGGGAGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTGGCCGTCCAGGCCCTTaGTGTGTTCGTCAAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: WEESPCCFGELAENSAHVGRPGP*CVRQTP Trigger: TGGAGTTTGACGAACACACAAAGGGCCTGGACGGCC...AACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | GAGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCCGTCCAGGCCCTTaGTGTGTTCGTCAAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: EESPCCFGELAENSAHVPGRPGP*CVRQTP Trigger: TGGAGTTTGACGAACACACAAAGGGCCTGGACGGCC...TGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | TCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTGGCCGTCCAGGCCCTTaGTGTGTTCGTCAAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: SPCCFGELAENSAHVPGFGRPGP*CVRQTP Trigger: TGGAGTTTGACGAACACACAAAGGGCCTGGACGGCC...AAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | GGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTCTTTTTGAACACTaGTCGGCACACCTGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: GVPMLLWGTGRELCTCSRLLFEH*SAHLVA Trigger: GGCGACCAGGTGTGCCGACAAGTGTTCAAAAAGAAG...CCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | CATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGCTTCTTTTTGAACACTaGTCGGCACACCTGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: HAALGNWQRTLHMFQAFPLLFEH*SAHLVA Trigger: GGCGACCAGGTGTGCCGACAAGTGTTCAAAAAGAAG...CGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | TGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGTGAGACGCACTGCGATCTaGCGGGTGGCAAAATCAATA | + |
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Preference number: 5 (lower is better) Translates to: CCFGELAENSAHVPGFPVRRTAI*RVAKSI Trigger: TATTGATTTTGCCACCCGCAAGATCGCAGTGCGTCT...CACGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | CCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCAGACGCACTGCGATCTaGCGGGTGGCAAAATCAATA | + |
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Preference number: 5 (lower is better) Translates to: PCCFGELAENSAHVPGFPRRTAI*RVAKSI Trigger: TATTGATTTTGCCACCCGCAAGATCGCAGTGCGTCT...GGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | TGGGAGGAGTCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTAGACGCACTGCGATCTaGCGGGTGGCAAAATCAATA | + |
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Preference number: 5 (lower is better) Translates to: WEESPCCFGELAENSAHVRRTAI*RVAKSI Trigger: TATTGATTTTGCCACCCGCAAGATCGCAGTGCGTCT...AACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGACTCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | TCCCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCTTCTTTTTGAACACTaGTCGGCACACCTGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: SPCCFGELAENSAHVPGFLLFEH*SAHLVA Trigger: GGCGACCAGGTGTGCCGACAAGTGTTCAAAAAGAAG...AAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | CATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCCGTTGCGGAACGTGCTGTaGGTTTTCGTCTTGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: HAALGNWQRTLHMFQAFPLRNVL*VFVLKL Trigger: TAACTTCAAGACGAAAACCAACAGCACGTTCCGCAA...CGGGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS-3UTR CAA 90 bp | CCCATGCTGCTTTGGGGAACTGGCAGAGAACTCTGCACATGTTCCAGGCTTTCCTTGCGGAACGTGCTGTaGGTTTTCGTCTTGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PMLLWGTGRELCTCSRLSLRNVL*VFVLKL Trigger: TAACTTCAAGACGAAAACCAACAGCACGTTCCGCAA...GGAAAGCCTGGAACATGTGCAGAGTTCTCTGCCAGTTCCCCAAAGCAGCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS TCA 72 bp | GGCCCTTTGTGTGTTCGTCAAACTCCACCCCGACGGTaGAATCCAGGTCGTAGTTGCGGAACGTGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GPLCVRQTPPRR*NPGRSCGTCCW Trigger: CCAACAGCACGTTCCGCAACTACGACCTGGATTTCACCGTCGGGGTGGAGTTTGACGAACACACAAAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS CAA 90 bp | GTTGCGGAACGTGCTGTTGGTTTTCGTCTTGAAGTTATCACCGTCTaGAGTGATGATCTTCGTCTGAGTCAGACGCACTGCGATCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: VAERAVGFRLEVITV*SDDLRLSQTHCDLA Trigger: CGCAAGATCGCAGTGCGTCTGACTCAGACGAAGATCATCACTCAAGACGGTGATAACTTCAAGACGAAAACCAACAGCACGTTCCGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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| CDS CAA 72 bp | CGTGCTGTTGGTTTTCGTCTTGAAGTTATCACCGTCTaGAGTGATGATCTTCGTCTGAGTCAGACGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: RAVGFRLEVITV*SDDLRLSQTHC Trigger: GCAGTGCGTCTGACTCAGACGAAGATCATCACTCAAGACGGTGATAACTTCAAGACGAAAACCAACAGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035029.3 ENSMUST00000187905.7 ENSMUST00000189446.7 |
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