Pregenerated sensors for RBMS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040043Ensembl transcript IDs: ENSMUST00000092033.4, ENSMUST00000099139.9, ENSMUST00000238843.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAGCCAGCCTGGTCTACATTGTCAGCCAGCCAGGACTGCACTGTaGGACCCTGCCTTAAACAGTGCGTGGGAGGGAGGTGGGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QSQPGLHCQPARTAL*DPALNSAWEGGGWV Trigger: CACCCACCCACCTCCCTCCCACGCACTGTTTAAGGCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGACAATGTAGACCAGGCTGGCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 90 bp | TGCACTCAGACAGAGTGGGAAGGATCGCTGAGTTCAAAGCCAGCCTaGTCTACATTGTCAGCCAGCCAGGACTGCACTGTGAGACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CTQTEWEGSLSSKPA*STLSASQDCTVRPC Trigger: GCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGACAATGTAGACCAGGCTGGCTTTGAACTCAGCGATCCTTCCCACTCTGTCTGAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 90 bp | TGGTTCCCTGGGGAAGGGGTCCAAACACCAGGGCTGGGCTGGGTATaGTGCATAGAGAAAGCTCAGTCCATTCTCAAGCATGCACAGTAT | + |
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Preference number: 1 (lower is better) Translates to: WFPGEGVQTPGLGWV*CIEKAQSILKHAQY Trigger: ATACTGTGCATGCTTGAGAATGGACTGAGCTTTCTCTATGCAGCATACCCAGCCCAGCCCTGGTGTTTGGACCCCTTCCCCAGGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 90 bp | GCAGAGCAGGTATCCAGGATGCTGAAGCTGGATGCCACTTCTCAGTaGCACTTGCCACCAGAGTTGGTTGAAGGTGGTTTCCAAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: AEQVSRMLKLDATSQ*HLPPELVEGGFQRL Trigger: CAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCAGCTTCAGCATCCTGGATACCTGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 90 bp | CGTCCTTCCACAAGAAGGAAAATTATTTCTGGTGGTCTGGTTCCCTaGGGAAGGGGTCCAAACACCAGGGCTGGGCTGGGTATGCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: RPSTRRKIISGGLVP*GRGPNTRAGLGMLH Trigger: ATGCAGCATACCCAGCCCAGCCCTGGTGTTTGGACCCCTTCCCCAGGGAACCAGACCACCAGAAATAATTTTCCTTCTTGTGGAAGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 90 bp | GAAGGTGGTTTCCAAAGGCTGCATGGTTGTCACATGTCTGCTTCCTaGAGTCAAAGTCTAACCCCTCCTAGGCCAGGAGGGCAGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: EGGFQRLHGCHMSAS*SQSLTPPRPGGQRE Trigger: TTCCCTCTGCCCTCCTGGCCTAGGAGGGGTTAGACTTTGACTTCAGGAAGCAGACATGTGACAACCATGCAGCCTTTGGAAACCACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 90 bp | GAGGAGTGGGGCCAGGTTCTGTCAGGTGTTCAGGACCAGCACACATaGTACTCCCCAGGCTTGGTAATCAAGGATGATGATGGACAAGAC | + |
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Preference number: 1 (lower is better) Translates to: EEWGQVLSGVQDQHT*YSPGLVIKDDDGQD Trigger: GTCTTGTCCATCATCATCCTTGATTACCAAGCCTGGGGAGTATCATGTGTGCTGGTCCTGAACACCTGACAGAACCTGGCCCCACTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 90 bp | TTCCCTGGGGAAGGGGTCCAAACACCAGGGCTGGGCTGGGTATGCTaGATAGAGAAAGCTCAGTCCATTCTCAAGCATGCACAGTATACA | + |
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Preference number: 1 (lower is better) Translates to: FPGEGVQTPGLGWVC*IEKAQSILKHAQYT Trigger: TGTATACTGTGCATGCTTGAGAATGGACTGAGCTTTCTCTATGCAGCATACCCAGCCCAGCCCTGGTGTTTGGACCCCTTCCCCAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 90 bp | GAAGCTGGATGCCACTTCTCAGTGGCACTTGCCACCAGAGTTGGTTaGAGGTGGTTTCCAAAGGCTGCATGGTTGTCACATGTCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: EAGCHFSVALATRVG*RWFPKAAWLSHVCF Trigger: GAAGCAGACATGTGACAACCATGCAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 90 bp | AAGTACCACTTGAGTACAGCCATGTGCAGCTGGGATGAGAGGCTGTaGGAACCCAGGCAGAAAAGATCCTCCAGGAGGCAAAGTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: KYHLSTAMCSWDERL*EPRQKRSSRRQSHR Trigger: TCTGTGACTTTGCCTCCTGGAGGATCTTTTCTGCCTGGGTTCTCACAGCCTCTCATCCCAGCTGCACATGGCTGTACTCAAGTGGTACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 90 bp | CAGAGGGAAAGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTaGTCTCCCTTCCCCCAATTCCACATGAAATTTAAATCAAATTCA | + |
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Preference number: 1 (lower is better) Translates to: QRESNLYCHTSLPVR*SPFPQFHMKFKSNS Trigger: TGAATTTGATTTAAATTTCATGTGGAATTGGGGGAAGGGAGAGCAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 90 bp | ATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAACCAAGGGTaGGCCCTGCTAAATAAGATGGCTCCTGCTGAATTAAGTGATTCA | + |
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Preference number: 1 (lower is better) Translates to: IPSNCVHLACTYNQG*ALLNKMAPAELSDS Trigger: TGAATCACTTAATTCAGCAGGAGCCATCTTATTTAGCAGGGCTCACCCTTGGTTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 90 bp | AAGCTCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTTaGTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAA | + |
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Preference number: 1 (lower is better) Translates to: KLSPFSSMHSIHNSS*FHPFKLCALGMYIQ Trigger: TTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGAAAGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTGCTCTCCCTTCCCTGCCTTAAACAGTaGGTGGGAGGGAGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: EGKQPLLPHFSTCALLSLPCLKQ*VGGRWV Trigger: CACCCACCTCCCTCCCACGCACTGTTTAAGGCAGGG...AAGGGAGAGCAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCTAACCCCTCCTAGGCCAGGAGGGCAGAGGGAAAGCAACCTCTACTGCCACTCTCTACCTGTGCGTTaGTCTCCCTTCCCCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: SLTPPRPGGQRESNLYCHSLPVR*SPFPQF Trigger: GAATTGGGGGAAGGGAGAGCAACGCACAGGTAGAGA...GTGGCAGTAGAGGTTGCTTTCCCTCTGCCCTCCTGGCCTAGGAGGGGTTAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CAA 90 bp | CACTTGGGAGGCAGAGGCAGGTGGATTTCTAAGTTCGAGGCTAGCTaGGTCTACAAAGTGAGCGCCAGGACAGCCAGGGCTACACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLGGRGRWISKFEAS*VYKVSARTARATQR Trigger: TCTCTGTGTAGCCCTGGCTGTCCTGGCGCTCACTTTGTAGACCAAGCTAGCCTCGAACTTAGAAATCCACCTGCCTCTGCCTCCCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAATAACTGCCAGGGAATAAGGGGTGGAGGAGTGGGGCCAGGTTCTGTCAGGGCCACCAGAGTTGGTTaGAGGTGGTTTCCAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PNNCQGIRGGGVGPGSVRATRVG*RWFPKA Trigger: AGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGC...CCTGACAGAACCTGGCCCCACTCCTCCACCCCTTATTCCCTGGCAGTTATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CAA 90 bp | ACAGAGTGGGAAGGATCGCTGAGTTCAAAGCCAGCCTGGTCTACATaGTCAGCCAGCCAGGACTGCACTGTGAGACCCTGCCTTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: TEWEGSLSSKPAWST*SASQDCTVRPCLKQ Trigger: CTGTTTAAGGCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGACAATGTAGACCAGGCTGGCTTTGAACTCAGCGATCCTTCCCACTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAAAGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTGCTCTCCCTTCAAACCTCTCGAAGATaGGAAGCACCTCAACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: EGKQPLLPHFSTCALLSLQTSRR*EAPQLV Trigger: CACCAGTTGAGGTGCTTCTCATCTTCGAGAGGTTTG...AAGGGAGAGCAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR TCA 90 bp | TACAAGTCCCTCCTGACCTTTGAGTGGCCAGGGAGCTGTGAGTCTTGCCTTTTTGCCACCAGAGTTGGTTaGAGGTGGTTTCCAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: YKSLLTFEWPGSCESCLFATRVG*RWFPKA Trigger: AGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGC...AAAAAGGCAAGACTCACAGCTCCCTGGCCACTCAAAGGTCAGGAGGGACTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAGTCCCTCCTGACCTTTGAGTGGCCAGGGAGCTGTGAGTCTTGCCTTTTTGGAGGCAGAGGCAGGTaGATTTCTAAGTTCGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: YKSLLTFEWPGSCESCLFGGRGR*ISKFEA Trigger: AGCCTCGAACTTAGAAATCCACCTGCCTCTGCCTCC...AAAAAGGCAAGACTCACAGCTCCCTGGCCACTCAAAGGTCAGGAGGGACTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR GCA 90 bp | TACAAGTCCCTCCTGACCTTTGAGTGGCCAGGGAGCTGTGAGTCTTGCCTTTTTGTGGTTTCCAAAGGCTaGATGGTTGTCACATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YKSLLTFEWPGSCESCLFVVSKG*MVVTCL Trigger: CAGACATGTGACAACCATGCAGCCTTTGGAAACCAC...AAAAAGGCAAGACTCACAGCTCCCTGGCCACTCAAAGGTCAGGAGGGACTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGGTAATCAAGGATGATGATGGACAAGACAGCAGCCTCTCGGGGACAAAATGCACTCAGACAGAGTaGGAAGGATCGCTGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: GLVIKDDDGQDSSLSGTKCTQTE*EGSLSS Trigger: TGAACTCAGCGATCCTTCCCACTCTGTCTGAGTGCA...TTTTGTCCCCGAGAGGCTGCTGTCTTGTCCATCATCATCCTTGATTACCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTCTTGCTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAACGCAGCGCCCCTTCACTaGCTTCACAGCACTGCGATT | + |
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Preference number: 2 (lower is better) Translates to: TVLAFIPSNCVHLACTYNAAPLH*LHSTAI Trigger: AATCGCAGTGCTGTGAAGTCAGTGAAGGGGCGCTGC...GTTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTCATGTGCAGCTGGGATaGGAGGCTGTGAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: SVHSQACTVYTTVLAFIPHVQLG*EAVRTQ Trigger: CTGGGTTCTCACAGCCTCTCATCCCAGCTGCACATG...AGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTCTTGCTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAACTCAGCCAGCCAGGACTaGACTGTGAGACCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TVLAFIPSNCVHLACTYNSASQD*TVRPCL Trigger: AAGGCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGA...GTTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAGCCAGCCAGGACTaGACTGTGAGACCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SVHSQACTVYTTVLAFIPSASQD*TVRPCL Trigger: AAGGCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGA...AGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAAAGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTGCTCTCCCTTGTGCAAAGTGTGTGTTaGGAGCTTTGCAAAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: EGKQPLLPHFSTCALLSLVQSVC*ELCKTK Trigger: TTTTGTTTTGCAAAGCTCTCAACACACACTTTGCAC...AAGGGAGAGCAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGCTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAACCAAGGAGAAGCACCTCAACTaGTGTCTTTGGGGTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLLSSLQTVCTWHVHTTKEKHLN*CLWGRR Trigger: TCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTC...CTTGGTTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTAGTTCAAAGCCAGCCTaGTCTACATTGTCAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SVHSQACTVYTTVLAFIPSSKPA*STLSAS Trigger: GCTGGCTGACAATGTAGACCAGGCTGGCTTTGAACT...AGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTGTGTGCACAACCTCCTGGTAAAGTaGAAGGCAGAACTTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ACTVYTTVLAFIPSNCVHNLLVK*KAELAQ Trigger: CTGAGCAAGTTCTGCCTTCCACTTTACCAGGAGGTT...GTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CAA 90 bp | AAAGCTCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTaGCTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACA | + |
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Preference number: 2 (lower is better) Translates to: KAQSILKHAQYTQQF*LSSLQTVCTWHVHT Trigger: TGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 72 bp | CAGAACTTGCTCAGCAGGGGCAGGGGCTGTGAGACCTaGGGCAGGATGAAGACCCAAGACCCTCCAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: QNLLSRGRGCET*GRMKTQDPPGG Trigger: GCCTCCTGGAGGGTCTTGGGTCTTCATCCTGCCCCAGGTCTCACAGCCCCTGCCCCTGCTGAGCAAGTTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 72 bp | CCTGGTCTACATTGTCAGCCAGCCAGGACTGCACTGTaGGACCCTGCCTTAAACAGTGCGTGGGAGGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: PGLHCQPARTAL*DPALNSAWEGG Trigger: ACCTCCCTCCCACGCACTGTTTAAGGCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGACAATGTAGACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 72 bp | AGACCCTCCAGGAGGCAGAGCAGGTATCCAGGATGCTaGAGCTGGATGCCACTTCTCAGTGGCACTTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: RPSRRQSRYPGC*SWMPLLSGTCH Trigger: GTGGCAAGTGCCACTGAGAAGTGGCATCCAGCTTCAGCATCCTGGATACCTGCTCTGCCTCCTGGAGGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 72 bp | CCTAGGCCAGGAGGGCAGAGGGAAAGCAACCTCTACTaGCACACTTCTCTACCTGTGCGTTGCTCTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: PRPGGQRESNLY*HTSLPVRCSPF Trigger: GAAGGGAGAGCAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTCTGCCCTCCTGGCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 72 bp | AAGCCAGCCTGGTCTACATTGTCAGCCAGCCAGGACTaGACTGTGAGACCCTGCCTTAAACAGTGCGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: KPAWSTLSASQD*TVRPCLKQCVG Trigger: TCCCACGCACTGTTTAAGGCAGGGTCTCACAGTGCAGTCCTGGCTGGCTGACAATGTAGACCAGGCTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 72 bp | CATGGCGGTGCACTCAGACAGAGTGGGAAGGATCGCTaGGTTCAAAGCCAGCCTGGTCTACATTGTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: HGGALRQSGKDR*VQSQPGLHCQP Trigger: TGGCTGACAATGTAGACCAGGCTGGCTTTGAACTCAGCGATCCTTCCCACTCTGTCTGAGTGCACCGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR GCA 72 bp | GGGGAAGGGGTCCAAACACCAGGGCTGGGCTGGGTATaGTGCATAGAGAAAGCTCAGTCCATTCTCAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: GEGVQTPGLGWV*CIEKAQSILKH Trigger: ATGCTTGAGAATGGACTGAGCTTTCTCTATGCAGCATACCCAGCCCAGCCCTGGTGTTTGGACCCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 72 bp | ACAGAGTGGGAAGGATCGCTGAGTTCAAAGCCAGCCTaGTCTACATTGTCAGCCAGCCAGGACTGCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: TEWEGSLSSKPA*STLSASQDCTV Trigger: CACAGTGCAGTCCTGGCTGGCTGACAATGTAGACCAGGCTGGCTTTGAACTCAGCGATCCTTCCCACTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 72 bp | TTCCAAAGGCTGCATGGTTGTCACATGTCTGCTTCCTaGAGTCAAAGTCTAACCCCTCCTAGGCCAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: FQRLHGCHMSAS*SQSLTPPRPGG Trigger: CCCTCCTGGCCTAGGAGGGGTTAGACTTTGACTTCAGGAAGCAGACATGTGACAACCATGCAGCCTTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR TCA 72 bp | CAAGTACCACTTGAGTACAGCCATGTGCAGCTGGGATaGGAGGCTGTGAGAACCCAGGCAGAAAAGATCCTC | + |
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Preference number: 3 (lower is better) Translates to: QVPLEYSHVQLG*EAVRTQAEKIL Trigger: GAGGATCTTTTCTGCCTGGGTTCTCACAGCCTCTCATCCCAGCTGCACATGGCTGTACTCAAGTGGTACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 72 bp | TGGATGCCACTTCTCAGTGGCACTTGCCACCAGAGTTaGTTGAAGGTGGTTTCCAAAGGCTGCATGGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: WMPLLSGTCHQS*LKVVSKGCMVV Trigger: GACAACCATGCAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR CCA 72 bp | GGCAGGCATGTTTACAAGTCCCTCCTGACCTTTGAGTaGCCAGGGAGCTGTGAGTCTTGCCTTTTTCTATCC | + |
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Preference number: 3 (lower is better) Translates to: GRHVYKSLLTFE*PGSCESCLFLS Trigger: GGATAGAAAAAGGCAAGACTCACAGCTCCCTGGCCACTCAAAGGTCAGGAGGGACTTGTAAACATGCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTTGGTAATCAAGGATGATGATGGACAAGACAGCAGCCTCTCGGGGACAAAATTCTCTACCTGTGCGTaGCTCTCCCTTCCCCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: GLVIKDDDGQDSSLSGTKFSTCA*LSLPPI Trigger: AATTGGGGGAAGGGAGAGCAACGCACAGGTAGAGAA...TTTTGTCCCCGAGAGGCTGCTGTCTTGTCCATCATCATCCTTGATTACCAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR TCA 72 bp | TGCCACTTCTCAGTGGCACTTGCCACCAGAGTTGGTTaGAGGTGGTTTCCAAAGGCTGCATGGTTGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: CHFSVALATRVG*RWFPKAAWLSH Trigger: ATGTGACAACCATGCAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR TCA 72 bp | GGCCAGGTTCTGTCAGGTGTTCAGGACCAGCACACATaGTACTCCCCAGGCTTGGTAATCAAGGATGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: GQVLSGVQDQHT*YSPGLVIKDDD Trigger: ATCATCATCCTTGATTACCAAGCCTGGGGAGTATCATGTGTGCTGGTCCTGAACACCTGACAGAACCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR GCA 72 bp | TGCCACCAGAGTTGGTTGAAGGTGGTTTCCAAAGGCTaGATGGTTGTCACATGTCTGCTTCCTGAAGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CHQSWLKVVSKG*MVVTCLLPEVK Trigger: TTTGACTTCAGGAAGCAGACATGTGACAACCATGCAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR CCA 72 bp | ATACCCAAACCTCTCGAAGATGAGAAGCACCTCAACTaGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: IPKPLEDEKHLN*CLWGRRKVRCN Trigger: ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTCGAGAGGTTTGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCTGTGAGAACCCAGGCAGAAAAGATCCTCCAGGAGGCAAAGTCACAGATTGTGCAAAGTGTGTGTaGAGAGCTTTGCAAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGCENPGRKDPPGGKVTDCAKCV*RALQNK Trigger: TTTGTTTTGCAAAGCTCTCAACACACACTTTGCACA...ATCTGTGACTTTGCCTCCTGGAGGATCTTTTCTGCCTGGGTTCTCACAGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR GCA 72 bp | AGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTaGTCTCCCTTCCCCCAATTCCACATGAAATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SNLYCHTSLPVR*SPFPQFHMKFK Trigger: TTTAAATTTCATGTGGAATTGGGGGAAGGGAGAGCAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR TCA 72 bp | AACTGTGTGCACTTGGCATGTACATACAACCAAGGGTaGGCCCTGCTAAATAAGATGGCTCCTGCTGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: NCVHLACTYNQG*ALLNKMAPAEL Trigger: TAATTCAGCAGGAGCCATCTTATTTAGCAGGGCTCACCCTTGGTTGTATGTACATGCCAAGTGCACACAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR GCA 72 bp | ATGCTGCATAGAGAAAGCTCAGTCCATTCTCAAGCATaGACAGTATACACAACAGTTCTTGCTTTCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: MLHRESSVHSQA*TVYTTVLAFIP Trigger: AGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGAGCTTTCTCTATGCAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTGTGTGCACTaGGCATGTACATACAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SVHSQACTVYTTVLAFIPSNCVH*ACTYNQ Trigger: TTGGTTGTATGTACATGCCAAGTGCACACAGTTTGA...AGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACCTCGGTCCTGGTCAGTGGTaGCTGGCTGCAGTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEGAQGGLHRLLSPGLDLGPGQW*LAAVLG Trigger: TCCGAGGACTGCAGCCAGGCACCACTGACCAGGACC...GAGGTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACCGCTGCTGTTGGGGGTaGTATTCCTTGGACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQEGAQGGLHRLLSPGLDRCCWG*YSLDLE Trigger: CTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCG...GTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACCTCAGGGTCAGAAGGTGCTaGTACTCCAGGGGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEGAQGGLHRLLSPGLDLRVRRC*YSRGCL Trigger: AAGACACCCCCTGGAGTAGCAGCACCTTCTGACCCT...GAGGTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACGGAGGTGCCATTTGCTaGGCCACATATAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQEGAQGGLHRLLSPGLDGGAIC*ATYSFL Trigger: CAAGAAGCTATATGTGGCTCAGCAAATGGCACCTCC...GTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092033.4 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACCTCCCTTGGACTTGGAGGTaGCATTTGCTGAGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: QEGAQGGLHRLLSPGLDLPWTWR*HLLSHI Trigger: TATGTGGCTCAGCAAATGGCACCTCCAAGTCCAAGG...GAGGTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092033.4 |
||
| CDS-3UTR CCA 90 bp | AGTCTAACCCCTCCTAGGCCAGGAGGGCAGAGGGAAAGCAACCTCTACTGCCACCCTCAGCAGAAACACTaGAAGAAGGCACAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLTPPRPGGQRESNLYCHPQQKH*KKAQLG Trigger: ACCCAGCTGTGCCTTCTTCCAGTGTTTCTGCTGAGG...GTGGCAGTAGAGGTTGCTTTCCCTCTGCCCTCCTGGCCTAGGAGGGGTTAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCGAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGGTCCTGGTCAGTGGTaGCTGGCTGCAGTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKMRSTSTGVFGVGERFGPGQW*LAAVLG Trigger: TCCGAGGACTGCAGCCAGGCACCACTGACCAGGACC...GAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTCGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | TGGATGCCACTTCTCAGTGGCACTTGCCACCAGAGTTGGTTGAAGGTGGTTTCCTCAGTGGTGCCTGGCTaGAGTCCTCGGATATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WMPLLSGTCHQSWLKVVSSVVPG*SPRIYR Trigger: CCTGTATATCCGAGGACTGCAGCCAGGCACCACTGA...GGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACCTCGATACTGTAAGGAGCTaGGTAGAACCCATTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEGAQGGLHRLLSPGLDLDTVRS*VEPILK Trigger: CTTCAGAATGGGTTCTACGCAGCTCCTTACAGTATC...GAGGTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAGCAGCGCCCCTTCACTGACTTCACAGCACTGCGATTGTTCTTAAACCATACGTGCCCAGACTGTTaGGTGACAGGTGACCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKQRPFTDFTALRLFLNHTCPDC*VTGDPV Trigger: AACTGGGTCACCTGTCACTCAACAGTCTGGGCACGT...ATGGTTTAAGAACAATCGCAGTGCTGTGAAGTCAGTGAAGGGGCGCTGCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | TACAAGTCCCTCCTGACCTTTGAGTGGCCAGGGAGCTGTGAGTCTTGCCTTTTTACGTGCCCAGACTGTTaGGTGACAGGTGACCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKSLLTFEWPGSCESCLFTCPDC*VTGDPV Trigger: AACTGGGTCACCTGTCACTCAACAGTCTGGGCACGT...AAAAAGGCAAGACTCACAGCTCCCTGGCCACTCAAAGGTCAGGAGGGACTTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | GATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATGGCTCCACTGCCAGTTaGTTCTGCTGGCCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DEKHLNWCLWGRRKVRCNGSTAS*FCWPLL Trigger: GAGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCC...ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCTCAGTGGTGCCTGGCTaGAGTCCTCGGATATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDEKHLNWCLWGRRKVRCSVVPG*SPRIYR Trigger: CCTGTATATCCGAGGACTGCAGCCAGGCACCACTGA...GCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAAGGTCCTGGTCAGTGGTaGCTGGCTGCAGTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSTSTGVFGVGERFAAIKGPGQW*LAAVLG Trigger: TCCGAGGACTGCAGCCAGGCACCACTGACCAGGACC...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGGCAGAGGGAAAGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTGGATTCTGCTGGCCATTaGTCTCCTCAGCAGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAEGKQPLLPHFSTCALDSAGH*SPQQKH Trigger: GTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATC...CAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTCTGCCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CCA 90 bp | GGCAAGCAGCGCCCCTTCACTGACTTCACAGCACTGCGATTGTTCTTAAACCATTTGGTTTTGCTCAGCTaGTCGTTCCCACCACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKQRPFTDFTALRLFLNHLVLLS*SFPPLP Trigger: CGGGAGTGGTGGGAACGACCAGCTGAGCAAAACCAA...ATGGTTTAAGAACAATCGCAGTGCTGTGAAGTCAGTGAAGGGGCGCTGCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR CAA 72 bp | CTGGATGCCACTTCTCAGTGGCACTTGCCACCAGAGTaGGTTGAAGGTGGTTTCCAAAGGCTGCATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDATSQWHLPPE*VEGGFQRLHGC Trigger: ACAACCATGCAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATAGGGTCAGAAGGTGCTaGTACTCCAGGGGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEKHLNWCLWGRRKVRCNRVRRC*YSRGCL Trigger: AAGACACCCCCTGGAGTAGCAGCACCTTCTGACCCT...ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR CCA 90 bp | GAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCGTGCCTGCACACCACTaGCTTTCAGTGCAGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: EDEKHLNWCLWGRRKVRCVPAHH*LSVQLQ Trigger: CTGTAACTGCACTGAAAGCCAGTGGTGTGCAGGCAC...GCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCGAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCATCTTGCCATACGGCTaGCAGAGCTTGACAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSKMRSTSTGVFGVGERFILPYG*QSLTRS Trigger: GGACCTTGTCAAGCTCTGTCAGCCGTATGGCAAGAT...GAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTCGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR TCA 90 bp | TCGAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTATCTTGCCATACGGCTaGCAGAGCTTGACAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKMRSTSTGVFGVGERFAILPYG*QSLTRS Trigger: GGACCTTGTCAAGCTCTGTCAGCCGTATGGCAAGAT...AGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAAGCCCAGACTGTTGAGTaGCAGGTGACCCAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTSTGVFGVGERFAAIKAQTVE*QVTQLL Trigger: CAGCAACTGGGTCACCTGTCACTCAACAGTCTGGGC...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCTTGCTCCTGTTGCTTTaGCATTTGTGCCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: EDEKHLNWCLWGRRKVRCLLLLL*HLCLHT Trigger: GGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAA...GCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGCAGAGGGAAAGCAACCTCTACTGCCACACTTCTCTACCTGTGCGTTGGATACTGTAAGGAGCTaGGTAGAACCCATTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRAEGKQPLLPHFSTCALDTVRS*VEPILK Trigger: CTTCAGAATGGGTTCTACGCAGCTCCTTACAGTATC...CAACGCACAGGTAGAGAAGTGTGGCAGTAGAGGTTGCTTTCCCTCTGCCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR CCA 90 bp | GATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATGGGGGTGCTATTCCTTaGACTTGGAGGTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DEKHLNWCLWGRRKVRCNGGAIP*TWRCHL Trigger: CAAATGGCACCTCCAAGTCCAAGGAATAGCACCCCC...ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092033.4 |
||
| 3UTR CAA 72 bp | ATGCCACTTCTCAGTGGCACTTGCCACCAGAGTTGGTaGAAGGTGGTTTCCAAAGGCTGCATGGTTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MPLLSGTCHQSW*KVVSKGCMVVT Trigger: TGTGACAACCATGCAGCCTTTGGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| 3UTR CAA 72 bp | GCTCCTGCTGAATTAAGTGATTCAGCCAAGTACCACTaGAGTACAGCCATGTGCAGCTGGGATGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APAELSDSAKYH*STAMCSWDERL Trigger: CAGCCTCTCATCCCAGCTGCACATGGCTGTACTCAAGTGGTACTTGGCTGAATCACTTAATTCAGCAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAAACGTGCCCAGACTGTTaGGTGACAGGTGACCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSTSTGVFGVGERFAAIKTCPDC*VTGDPV Trigger: AACTGGGTCACCTGTCACTCAACAGTCTGGGCACGT...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGTAATCAAGGATGATGATGGACAAGACAGCAGCCTCTCGGGGACAAAATTGCTCCTGTTGCTTTaGCATTTGTGCCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: GLVIKDDDGQDSSLSGTKLLLLL*HLCLHT Trigger: GGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAA...TTTTGTCCCCGAGAGGCTGCTGTCTTGTCCATCATCATCCTTGATTACCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR CCA 90 bp | GATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATGCTATTCCTTGGACTTaGAGGTGCCATTTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DEKHLNWCLWGRRKVRCNAIPWT*RCHLLS Trigger: GCTCAGCAAATGGCACCTCCAAGTCCAAGGAATAGC...ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092033.4 |
||
| CDS-3UTR CCA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAATTGGTTTTGCTCAGCTaGTCGTTCCCACCACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSTSTGVFGVGERFAAIKLVLLS*SFPPLP Trigger: CGGGAGTGGTGGGAACGACCAGCTGAGCAAAACCAA...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGCTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAACCAAGGGCTCCACTGCCAGTTaGTTCTGCTGGCCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSSLQTVCTWHVHTTKGSTAS*FCWPLL Trigger: GAGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCC...CTTGGTTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | TACAAGTCCCTCCTGACCTTTGAGTGGCCAGGGAGCTGTGAGTCTTGCCTTTTTCACCGTCAGCAAATTTaGAAAGCAAAGGGTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKSLLTFEWPGSCESCLFHRQQI*KAKGQK Trigger: CTTCTGACCCTTTGCTTTGCAAATTTGCTGACGGTG...AAAAAGGCAAGACTCACAGCTCCCTGGCCACTCAAAGGTCAGGAGGGACTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAATTGCTCCTGTTGCTTTaGCATTTGTGCCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: RSTSTGVFGVGERFAAIKLLLLL*HLCLHT Trigger: GGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAA...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATCACCGTCAGCAAATTTaGAAAGCAAAGGGTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DEKHLNWCLWGRRKVRCNHRQQI*KAKGQK Trigger: CTTCTGACCCTTTGCTTTGCAAATTTGCTGACGGTG...ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR TCA 90 bp | ATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTGGCTCCACTGCCAGTTaGTTCTGCTGGCCATTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILKHAQYTQQFLLSSLQTGSTAS*FCWPLL Trigger: GAGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCC...AGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GGGGTAGGAGAAAGGTTCGCTGCAATTAAATACAAAGCAAGAAACTTCTTTTGCCGCTGCTGTTGGGGGTaGTATTCCTTGGACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GVGERFAAIKYKARNFFCRCCWG*YSLDLE Trigger: CTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCG...GCAAAAGAAGTTTCTTGCTTTGTATTTAATTGCAGCGAACCTTTCTCCTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATCAAAGCCATAGCCTTTaGACTTGTTTGTGGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: DEKHLNWCLWGRRKVRCNQSHSL*TCLWSC Trigger: ACAAGACCACAAACAAGTGCAAAGGCTATGGCTTTG...ATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GGCTTGGTAATCAAGGATGATGATGGACAAGACAGCAGCCTCTCGGGGACAAAACAAAGCCATAGCCTTTaGACTTGTTTGTGGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GLVIKDDDGQDSSLSGTKQSHSL*TCLWSC Trigger: ACAAGACCACAAACAAGTGCAAAGGCTATGGCTTTG...TTTTGTCCCCGAGAGGCTGCTGTCTTGTCCATCATCATCCTTGATTACCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAAGTACAACTGGTATTaGATCCAAGATGGGTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: EDEKHLNWCLWGRRKVRCKYNWY*IQDGLG Trigger: ACCTAACCCATCTTGGATGCAATACCAGTTGTACTT...GCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238843.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCCATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTGTGCCTGCACACCACTaGCTTTCAGTGCAGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: SVHSQACTVYTTVLAFIPVPAHH*LSVQLQ Trigger: CTGTAACTGCACTGAAAGCCAGTGGTGTGCAGGCAC...AGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAATGGACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CCA 90 bp | CATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTGTGTGCACTGTGCCTGCACACCACTaGCTTTCAGTGCAGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: HAQYTQQFLLSSLQTVCTVPAHH*LSVQLQ Trigger: CTGTAACTGCACTGAAAGCCAGTGGTGTGCAGGCAC...AGTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAAGATACTGTAAGGAGCTaGGTAGAACCCATTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RSTSTGVFGVGERFAAIKDTVRS*VEPILK Trigger: CTTCAGAATGGGTTCTACGCAGCTCCTTACAGTATC...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR TCA 90 bp | ATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTATCTTGCCATACGGCTaGCAGAGCTTGACAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ILKHAQYTQQFLLSSLQTILPYG*QSLTRS Trigger: GGACCTTGTCAAGCTCTGTCAGCCGTATGGCAAGAT...AGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTCCTCAGCAGAAACACTaGAAGAAGGCACAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ILKHAQYTQQFLLSSLQTPQQKH*KKAQLG Trigger: ACCCAGCTGTGCCTTCTTCCAGTGTTTCTGCTGAGG...AGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | ACAGTTCTTGCTTTCATCCCTTCAAACTGTGTGCACTTGGCATGTACATACAACCACCGTCAGCAAATTTaGAAAGCAAAGGGTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVLAFIPSNCVHLACTYNHRQQI*KAKGQK Trigger: CTTCTGACCCTTTGCTTTGCAAATTTGCTGACGGTG...GTTGTATGTACATGCCAAGTGCACACAGTTTGAAGGGATGAAAGCAAGAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | ATTCTCAAGCATGCACAGTATACACAACAGTTCTTGCTTTCATCCCTTCAAACTGATTCTGCTGGCCATTaGTCTCCTCAGCAGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: ILKHAQYTQQFLLSSLQTDSAGH*SPQQKH Trigger: GTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATC...AGTTTGAAGGGATGAAAGCAAGAACTGTTGTGTATACTGTGCATGCTTGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CCA 90 bp | GTAGGAGAAAGGTTCGCTGCAATTAAATACAAAGCAAGAAACTTCTTTTGCAAATTGGTTTTGCTCAGCTaGTCGTTCCCACCACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VGERFAAIKYKARNFFCKLVLLS*SFPPLP Trigger: CGGGAGTGGTGGGAACGACCAGCTGAGCAAAACCAA...TTTGCAAAAGAAGTTTCTTGCTTTGTATTTAATTGCAGCGAACCTTTCTCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CCA 90 bp | GTAGGAGAAAGGTTCGCTGCAATTAAATACAAAGCAAGAAACTTCTTTTGCAAACCTCAGCAGAAACACTaGAAGAAGGCACAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VGERFAAIKYKARNFFCKPQQKH*KKAQLG Trigger: ACCCAGCTGTGCCTTCTTCCAGTGTTTCTGCTGAGG...TTTGCAAAAGAAGTTTCTTGCTTTGTATTTAATTGCAGCGAACCTTTCTCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GTAGGAGAAAGGTTCGCTGCAATTAAATACAAAGCAAGAAACTTCTTTTGCAAAGATTCTGCTGGCCATTaGTCTCCTCAGCAGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: VGERFAAIKYKARNFFCKDSAGH*SPQQKH Trigger: GTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATC...TTTGCAAAAGAAGTTTCTTGCTTTGTATTTAATTGCAGCGAACCTTTCTCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR GCA 90 bp | GTAGGAGAAAGGTTCGCTGCAATTAAATACAAAGCAAGAAACTTCTTTTGCAAACAAAGCCATAGCCTTTaGACTTGTTTGTGGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VGERFAAIKYKARNFFCKQSHSL*TCLWSC Trigger: ACAAGACCACAAACAAGTGCAAAGGCTATGGCTTTG...TTTGCAAAAGAAGTTTCTTGCTTTGTATTTAATTGCAGCGAACCTTTCTCCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | TTCCATCAGCCACAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGGCTCCACTGCCAGTaGATTCTGCTGGCCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: FHQPQEGAQGGLHRLLSPGLHCQ*ILLAIA Trigger: AGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCCC...TGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTGTGGCTGATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | CCAAATAACTGCCAGGGAATAAGGGGTGGAGGAGTGGGGCCAGGTTCTGTCAGGGGGCTCCACTGCCAGTaGATTCTGCTGGCCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: PNNCQGIRGGGVGPGSVRGLHCQ*ILLAIA Trigger: AGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCCC...CCTGACAGAACCTGGCCCCACTCCTCCACCCCTTATTCCCTGGCAGTTATTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGGAGCCCAAGGAGGACTGCATAGGCTTCTCTCCCCAGGTCTGGACCTCTGCTATTCCTTGGACTaGGAGGTGCCATTTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QEGAQGGLHRLLSPGLDLCYSLD*EVPFAE Trigger: CTCAGCAAATGGCACCTCCAAGTCCAAGGAATAGCA...GAGGTCCAGACCTGGGGAGAGAAGCCTATGCAGTCCTCCTTGGGCTCCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092033.4 |
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| CDS-3UTR CAA 90 bp | TGGATGCCACTTCTCAGTGGCACTTGCCACCAGAGTTGGTTGAAGGTGGTTTCCGGGCTCCACTGCCAGTaGATTCTGCTGGCCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: WMPLLSGTCHQSWLKVVSGLHCQ*ILLAIA Trigger: AGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCCC...GGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | TGGATGCCACTTCTCAGTGGCACTTGCCACCAGAGTTGGTTGAAGGTGGTTTCCAGGGTCTTGCTCCTGTaGCTTTGCCATTTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: WMPLLSGTCHQSWLKVVSRVLLL*LCHLCL Trigger: CAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCT...GGAAACCACCTTCAACCAACTCTGGTGGCAAGTGCCACTGAGAAGTGGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | AGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTGCAATTAAAAGGGTCTTGCTCCTGTaGCTTTGCCATTTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RSTSTGVFGVGERFAAIKRVLLL*LCHLCL Trigger: CAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCT...TTTAATTGCAGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | TCGAAGATGAGAAGCACCTCAACTGGTGTCTTTGGGGTAGGAGAAAGGTTCGCTCCACCGTCAGCAAATTaGCAAAGCAAAGGGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SKMRSTSTGVFGVGERFAPPSAN*QSKGSE Trigger: TTCTGACCCTTTGCTTTGCAAATTTGCTGACGGTGG...AGCGAACCTTTCTCCTACCCCAAAGACACCAGTTGAGGTGCTTCTCATCTTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS-3UTR CAA 90 bp | GGGGTAGGAGAAAGGTTCGCTGCAATTAAATACAAAGCAAGAAACTTCTTTTGCAGGGTCTTGCTCCTGTaGCTTTGCCATTTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GVGERFAAIKYKARNFFCRVLLL*LCHLCL Trigger: CAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCT...GCAAAAGAAGTTTCTTGCTTTGTATTTAATTGCAGCGAACCTTTCTCCTACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092033.4 ENSMUST00000099139.9 ENSMUST00000238843.2 |
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| CDS CAA 72 bp | CGCCGCCTCCGCCGCTGCTGTTGGGGGTGCTATTCCTaGGACTTGGAGGTGCCATTTGCTGAGCCACATATA | + |
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Preference number: 6 (lower is better) Translates to: RRLRRCCWGCYS*DLEVPFAEPHI Trigger: TATATGTGGCTCAGCAAATGGCACCTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCGGCGGAGGCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092033.4 |
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