Pregenerated sensors for RBM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032580Ensembl transcript IDs: ENSMUST00000035199.13, ENSMUST00000182022.8, ENSMUST00000182026.2, ENSMUST00000182304.8, ENSMUST00000182371.8, ENSMUST00000182421.8, ENSMUST00000182659.8, ENSMUST00000183248.3, ENSMUST00000192130.6, ENSMUST00000193342.6
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGCCAGCTCCTTTTAGTCGGACTTGAGCCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTCCTAAGCCTGAGCCTTCCCGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PSQLLLVGLEPQWEL*CLDTFFLSLSLPAN Trigger: GTTGGCGGGAAGGCTCAGGCTTAGGAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGGCTCAAGTCCGACTAAAAGGAGCTGGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR GCA 90 bp | TGGTGGGCTGCTCGTAATTCACAGTGCCAGCATCAAACTGCTTCTTaGGCTTGGGCTCTGGGGGCTCTGGAATTCCGTATTTCTCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: WWAARNSQCQHQTAS*AWALGALEFRISLV Trigger: GACGAGAGAAATACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCACTGTGAATTACGAGCAGCCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR GCA 90 bp | GAACAGCATCTTTGTAGGAATCGGCACCTGACAACCCATAGGCACTaGCTTTGGCTCCCAAGCCAGCTCCTTTTAGTCGGACTTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: EQHLCRNRHLTTHRH*LWLPSQLLLVGLEP Trigger: AGGCTCAAGTCCGACTAAAAGGAGCTGGCTTGGGAGCCAAAGGCAGTGCCTATGGGTTGTCAGGTGCCGATTCCTACAAAGATGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CCA 90 bp | CATCTTTGTAGGAATCGGCACCTGACAACCCATAGGCACTGCCTTTaGCTCCCAAGCCAGCTCCTTTTAGTCGGACTTGAGCCTCAATGG | + |
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Preference number: 1 (lower is better) Translates to: HLCRNRHLTTHRHCL*LPSQLLLVGLEPQW Trigger: CCATTGAGGCTCAAGTCCGACTAAAAGGAGCTGGCTTGGGAGCCAAAGGCAGTGCCTATGGGTTGTCAGGTGCCGATTCCTACAAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR TCA 90 bp | CTCCAGCCCTCCAGCTTGCTGCTGATAAAACTGCTGGTAATCCTGTaGGTATTGAGTGTACTGTGTGTAGCCATCCTGGCCTGGCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: LQPSSLLLIKLLVIL*VLSVLCVAILAWLH Trigger: ATGCAGCCAGGCCAGGATGGCTACACACAGTACACTCAATACTCACAGGATTACCAGCAGTTTTATCAGCAGCAAGCTGGAGGGCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR CCA 90 bp | CTCTCTCCCTCAGCTCCAAGGCTTCCAACTCCTGCTCGCTCAGCCTaGATCTTCGGTAGATGTCCATATTTTGCTTGTGTAAGTCGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LSPSAPRLPTPARSA*IFGRCPYFACVSRR Trigger: TCTCCGACTTACACAAGCAAAATATGGACATCTACCGAAGATCCAGGCTGAGCGAGCAGGAGTTGGAAGCCTTGGAGCTGAGGGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CCA 90 bp | GTAATTCACAGTGCCAGCATCAAACTGCTTCTTGCGCTTGGGCTCTaGGGGCTCTGGAATTCCGTATTTCTCTCGTCTTTCTGCTGCTCG | + |
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Preference number: 1 (lower is better) Translates to: VIHSASIKLLLALGL*GLWNSVFLSSFCCS Trigger: CGAGCAGCAGAAAGACGAGAGAAATACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCACTGTGAATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CCA 90 bp | GCTGCTCGTAATTCACAGTGCCAGCATCAAACTGCTTCTTGCGCTTaGGCTCTGGGGGCTCTGGAATTCCGTATTTCTCTCGTCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: AARNSQCQHQTASCA*ALGALEFRISLVFL Trigger: CAGAAAGACGAGAGAAATACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCACTGTGAATTACGAGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR TCA 90 bp | GCTCCCTGTGCTCAGCATTGCTTCCCCAGTTTCACTCCATCTCAGTaGACCGGGCAAACATGGCTTTCCGAACAGCATCTTTGTAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: APCAQHCFPSFTPSQ*TGQTWLSEQHLCRN Trigger: ATTCCTACAAAGATGCTGTTCGGAAAGCCATGTTTGCCCGGTTCACTGAGATGGAGTGAAACTGGGGAAGCAATGCTGAGCACAGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGGAAGGCAGGCCAGTCTGCTGGTTCGAGCTAGCCTCTGCAGCTGGCACGCTACAGAGAAGGCGCTaGCTCGGTTACCATCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: FVEGRPVCWFELASAAGTLQRRR*LGYHLE Trigger: TTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAG...CGTGCCAGCTGCAGAGGCTAGCTCGAACCAGCAGACTGGCCTGCCTTCCACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCCTGTGCTCAGCATTGCTTCCCCAGTTTCACTCCATCTCAGTGAACCGGAGAGCTGCTGGTGCCTaGCCAGGGCATCTCTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CSLCSALLPQFHSISVNRRAAGA*PGHLCL Trigger: CAAACAGAGATGCCCTGGTCAGGCACCAGCAGCTCT...CCGGTTCACTGAGATGGAGTGAAACTGGGGAAGCAATGCTGAGCACAGGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CAA 90 bp | CCTAAGCCTGAGCCTTCCCGCCAACCCATAGCCTGCAGCATCTTGTaGCCAATGTTACTGTGGTCAATGCCATCTTTGGTGGGCTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: PKPEPSRQPIACSIL*PMLLWSMPSLVGCS Trigger: CGAGCAGCCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGATGCTGCAGGCTATGGGTTGGCGGGAAGGCTCAGGCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR TCA 90 bp | TACACCAGTAGGGGAAGCAGCGGGGGCCTGTGTACTTGTGCTAGTGCTAGGCTGGAGATAGGGCTGTCATaGTGGAATCCACCACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: YTSRGSSGGLCTCASARLEIGLS*WNPPQC Trigger: ACACTGTGGTGGATTCCATCATGACAGCCCTATCTC...CAGCCTAGCACTAGCACAAGTACACAGGCCCCCGCTGCTTCCCCTACTGGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACGAGCAACTGAGGAGATaGCTTGCTCCCTGTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHEQLRR*LAPCAQ Trigger: CTGAGCACAGGGAGCAAGCCATCTCCTCAGTTGCTC...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR CCA 90 bp | TACACCAGTAGGGGAAGCAGCGGGGGCCTGTGTACTTGTGCTAGTGCTAGGCTGAGTCGGAGAGCCAGGTaGGTTGGAGGTCTGATTATA | + |
|
Preference number: 2 (lower is better) Translates to: YTSRGSSGGLCTCASARLSRRAR*VGGLII Trigger: TATAATCAGACCTCCAACCCACCTGGCTCTCCGACT...CAGCCTAGCACTAGCACAAGTACACAGGCCCCCGCTGCTTCCCCTACTGGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGAGCAACTGAGGAGATaGCTTGCTCCCTGTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHEQLRR*LAPCAQ Trigger: CTGAGCACAGGGAGCAAGCCATCTCCTCAGTTGCTC...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGATAGGGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAGAGCAACTGAGGAGATaGCTTGCTCCCTGTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GDRAVMMESTTVCGAMFREQLRR*LAPCAQ Trigger: CTGAGCACAGGGAGCAAGCCATCTCCTCAGTTGCTC...TCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCCCTATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR CCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTTCACAGTCCCTCAGGTaGGAAGGAAGGTTGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: DNHSELLKPPGSRDTTQASQSLR*EGRLFT Trigger: GGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGA...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTACACAATGGGGGAGGTaGGGAAAGGGTTTCAATGAA | + |
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Preference number: 2 (lower is better) Translates to: CNWNNGLLSGYRALHLGPTQWGR*GKGFNE Trigger: TTCATTGAAACCCTTTCCTCACCTCCCCCATTGTGT...AGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
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| 3UTR-3UTR TCA 90 bp | ACTAGCTACAGAGAAGGCGCTGACTCGGTTACCATCTGGAAGGACCAAATCTTTCTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: TSYREGADSVTIWKDQIFLTSAG*GPSKDS Trigger: GGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAG...AAAGATTTGGTCCTTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAGCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182421.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGACAACCCATAGGCACTaGCTTTGGCTCCCAAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRTTHRH*LWLPSQ Trigger: CTGGCTTGGGAGCCAAAGGCAGTGCCTATGGGTTGT...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAACTACACCAGTAGGGGAAGCAGCGGGGGCCTGTGTACTTGTGCTAGTGCTAGAGTCAAACTTGTCTaGTCCACATCGGAAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: RNYTSRGSSGGLCTCASARVKLV*STSEAF Trigger: AAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCT...AGCACTAGCACAAGTACACAGGCCCCCGCTGCTTCCCCTACTGGTGTAGTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCGGAGAGCCAGGTGGGTTGGAGGTCTGATTATAGAGTTGGGGACTTTGCAGGTACTGCATACTTaGTACCAGGAACTACACCAG | + |
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Preference number: 2 (lower is better) Translates to: LSRRARWVGGLIIELGTLQVLHT*YQELHQ Trigger: CTGGTGTAGTTCCTGGTACCAAGTATGCAGTACCTG...CAAAGTCCCCAACTCTATAATCAGACCTCCAACCCACCTGGCTCTCCGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTTCTCCTTTCCCTCTTTTGTGGAAGGCAGGCCAGTCTGCTGGTTCGACACTTTGAGACTGAGTaGATGACCACTGAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FFLLLSLFCGRQASLLVRHFETE*MTTEQQ Trigger: CTGCTGCTCAGTGGTCATCCACTCAGTCTCAAAGTG...TCGAACCAGCAGACTGGCCTGCCTTCCACAAAAGAGGGAAAGGAGAAGAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTACCCCTCAGAATGAAGTaGTTCATCCTAAAACTATTA | + |
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Preference number: 2 (lower is better) Translates to: VVALVLTTTPSFSSPQEVPLRMK*FILKLL Trigger: TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGG...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGATAAAACTGCTGGTAATCCTGTGAGTATTGAGTGTACTGTGTGTAGCGAGATAGGGCTGTCATaGTGGAATCCACCACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: AADKTAGNPVSIECTVCSEIGLS*WNPPQC Trigger: ACACTGTGGTGGATTCCATCATGACAGCCCTATCTC...GCTACACACAGTACACTCAATACTCACAGGATTACCAGCAGTTTTATCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGATAAAACTGCTGGTAATCCTGTGAGTATTGAGTGTACTGTGTGTAGCTTGAGACTGAGTGGATaGCCACTGAGCAGCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: AADKTAGNPVSIECTVCSLRLSG*PLSSSN Trigger: ATTGCTGCTGCTCAGTGGTCATCCACTCAGTCTCAA...GCTACACACAGTACACTCAATACTCACAGGATTACCAGCAGTTTTATCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTACTGAGGAGATGGCTTaGTCCCTGTGCTCAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: WFILKLLIAQGMPLETGSTEEMA*SLCSAL Trigger: CAATGCTGAGCACAGGGAGCAAGCCATCTCCTCAGT...ACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGATAAAACTGCTGGTAATCCTGTGAGTATTGAGTGTACTGTGTGTAGCCTGCTGGTAATCCTGTaGGTATTGAGTGTACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: AADKTAGNPVSIECTVCSLLVIL*VLSVLC Trigger: ACACAGTACACTCAATACTCACAGGATTACCAGCAG...GCTACACACAGTACACTCAATACTCACAGGATTACCAGCAGTTTTATCAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTTGTGTCTGTTTGTCTTTTATGAGGCGAATGTTATTGACAGCTAAGGAAACTGAGGAGATGGCTTaGTCCCTGTGCTCAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: FCCVCLSFMRRMLLTAKETEEMA*SLCSAL Trigger: CAATGCTGAGCACAGGGAGCAAGCCATCTCCTCAGT...TTCCTTAGCTGTCAATAACATTCGCCTCATAAAAGACAAACAGACACAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CAA 90 bp | AACTCATTACATTTACACTATATACACCTTAGTATAAAAAGCCCATaGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: NSLHLHYIHLSIKSP*SPLFTVPQVGRKVV Trigger: AACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAGGTGTATATAGTGTAAATGTAATGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR GCA 72 bp | GGAAGGCAGGCCAGTCTGCTGGTTCGAGCTAGCCTCTaGAGCTGGCACGTAGGTCTCCTTCTCGCCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: GRQASLLVRASL*SWHVGLLLAIP Trigger: TGGGATGGCGAGAAGGAGACCTACGTGCCAGCTGCAGAGGCTAGCTCGAACCAGCAGACTGGCCTGCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR CCA 72 bp | CAGGCCAGTCTGCTGGTTCGAGCTAGCCTCTGCAGCTaGCACGTAGGTCTCCTTCTCGCCATCCCAGTACAA | + |
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Preference number: 3 (lower is better) Translates to: QASLLVRASLCS*HVGLLLAIPVQ Trigger: TTGTACTGGGATGGCGAGAAGGAGACCTACGTGCCAGCTGCAGAGGCTAGCTCGAACCAGCAGACTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR CCA 72 bp | AGGAATCGGCACCTGACAACCCATAGGCACTGCCTTTaGCTCCCAAGCCAGCTCCTTTTAGTCGGACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: RNRHLTTHRHCL*LPSQLLLVGLE Trigger: CTCAAGTCCGACTAAAAGGAGCTGGCTTGGGAGCCAAAGGCAGTGCCTATGGGTTGTCAGGTGCCGATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGTGGGAAGGAAGGTaGTTTACCCACGTAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHRWEGR*FTHVRE Trigger: CTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCT...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR GCA 72 bp | CTTTGTAGGAATCGGCACCTGACAACCCATAGGCACTaGCTTTGGCTCCCAAGCCAGCTCCTTTTAGTCGGA | + |
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Preference number: 3 (lower is better) Translates to: LCRNRHLTTHRH*LWLPSQLLLVG Trigger: TCCGACTAAAAGGAGCTGGCTTGGGAGCCAAAGGCAGTGCCTATGGGTTGTCAGGTGCCGATTCCTACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CCA 72 bp | AAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTaGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KAHCPLCSQSLR*EGRLFTHVREL Trigger: GAGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTAGGTGGGAAGGAAGGTaGTTTACCCACGTAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LFTVPQVGRKVVYPRKGARWEGR*FTHVRE Trigger: CTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCT...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR GCA 72 bp | CTTCCTAAGCCTGAGCCTTCCCGCCAACCCATAGCCTaGAGCATCTTGTTGCCAATGTTACTGTGGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: LPKPEPSRQPIA*SILLPMLLWSM Trigger: CATTGACCACAGTAACATTGGCAACAAGATGCTGCAGGCTATGGGTTGGCGGGAAGGCTCAGGCTTAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR CCA 72 bp | AGTGCCAGCATCAAACTGCTTCTTGCGCTTGGGCTCTaGGGGCTCTGGAATTCCGTATTTCTCTCGTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: SASIKLLLALGL*GLWNSVFLSSF Trigger: GAAAGACGAGAGAAATACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTCCCTGTGCTCAGCATTGCTTCCCCAGTTTCACTCCATCTCAGTGAACCGGATAGCCTGCAGCATCTaGTTGCCAATGTTACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: CSLCSALLPQFHSISVNRIACSI*LPMLLW Trigger: CCACAGTAACATTGGCAACAAGATGCTGCAGGCTAT...CCGGTTCACTGAGATGGAGTGAAACTGGGGAAGCAATGCTGAGCACAGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
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| 3UTR-3UTR CAA 90 bp | TTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGAGTATAAAAAGCCCATaGTCCCCTCTGTTCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: LTTTPSFSSPQEVGTQHRSIKSP*SPLFTV Trigger: GACTGTGAACAGAGGGGACAATGGGCTTTTTATACT...CCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAAGTATAAAAAGCCCATaGTCCCCTCTGTTCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: VVALVLTTTPSFSSPQEVSIKSP*SPLFTV Trigger: GACTGTGAACAGAGGGGACAATGGGCTTTTTATACT...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTACTAGCTACAGAGAAGGCGCTGACTCGGTTACCATCTGGAAGGACCAAATGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG | + |
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Preference number: 3 (lower is better) Translates to: AVLATEKALTRLPSGRTKCSESN*SAPHRK Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...TTTGGTCCTTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAGCTAGTACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
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| 3UTR-3UTR CAA 90 bp | GGTACCAGGAACTACACCAGTAGGGGAAGCAGCGGGGGCCTGTGTACTTGTGCTGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTRNYTSRGSSGGLCTCADCYNA*QCAFLE Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...AGCACAAGTACACAGGCCCCCGCTGCTTCCCCTACTGGTGTAGTTCCTGGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182421.8 |
||
| 3UTR TCA 72 bp | CTCCTTTTAGTCGGACTTGAGCCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTCCTAAGCCTGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLVGLEPQWEL*CLDTFFLSLSL Trigger: AAGGCTCAGGCTTAGGAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGGCTCAAGTCCGACTAAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| 3UTR GCA 72 bp | CCTGCAGCATCTTGTTGCCAATGTTACTGTGGTCAATaGCATCTTTGGTGGGCTGCTCGTAATTCACAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PAASCCQCYCGQ*HLWWAARNSQC Trigger: GCACTGTGAATTACGAGCAGCCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGATGCTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| 3UTR CCA 72 bp | TCAGCTCCAAGGCTTCCAACTCCTGCTCGCTCAGCCTaGATCTTCGGTAGATGTCCATATTTTGCTTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SAPRLPTPARSA*IFGRCPYFACV Trigger: TACACAAGCAAAATATGGACATCTACCGAAGATCCAGGCTGAGCGAGCAGGAGTTGGAAGCCTTGGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| 3UTR TCA 72 bp | TCCAGCTTGCTGCTGATAAAACTGCTGGTAATCCTGTaGGTATTGAGTGTACTGTGTGTAGCCATCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLLIKLLVIL*VLSVLCVAILA Trigger: GGCCAGGATGGCTACACACAGTACACTCAATACTCACAGGATTACCAGCAGTTTTATCAGCAGCAAGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| 3UTR GCA 72 bp | TCATCTCCATTGCGCACCAATTCAGGGAGGAGTTGCTaGCTTTCAGCTAAGGCTCCCTTCTTCTCAAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSPLRTNSGRSC*LSAKAPFFSKR Trigger: TCTTTTTGAGAAGAAGGGAGCCTTAGCTGAAAGGCAGCAACTCCTCCCTGAATTGGTGCGCAATGGAGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTATGACAGTGGTGGCTTaGGTGTTGACAACCACTCCG | + |
|
Preference number: 3 (lower is better) Translates to: KQRKTTDPTGSTAFTTHSMTVVA*VLTTTP Trigger: CGGAGTGGTTGTCAACACCAAAGCCACCACTGTCAT...AGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| 3UTR CCA 72 bp | TGTTGCCAATGTTACTGTGGTCAATGCCATCTTTGGTaGGCTGCTCGTAATTCACAGTGCCAGCATCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: CCQCYCGQCHLW*AARNSQCQHQT Trigger: AGTTTGATGCTGGCACTGTGAATTACGAGCAGCCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| 3UTR CCA 72 bp | TCTTGTTGCCAATGTTACTGTGGTCAATGCCATCTTTaGTGGGCTGCTCGTAATTCACAGTGCCAGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SCCQCYCGQCHL*WAARNSQCQHQ Trigger: TTGATGCTGGCACTGTGAATTACGAGCAGCCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGATAAAACTGCTGGTAATCCTGTGAGTATTGAGTGTACTGTGTGTAGCTGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AADKTAGNPVSIECTVCSCSESN*SAPHRK Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...GCTACACACAGTACACTCAATACTCACAGGATTACCAGCAGTTTTATCAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAGAAGGCGCTGACTCGGTTACCATCTGGAAGGACCAAATCTTTTCTGGCTTCTGTTGTGTCTGTTaGTCTTTTATGAGGCGAATG | + |
|
Preference number: 3 (lower is better) Translates to: YREGADSVTIWKDQIFSGFCCVC*SFMRRM Trigger: CATTCGCCTCATAAAAGACAAACAGACACAACAGAA...GCCAGAAAAGATTTGGTCCTTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTGTAGTCAACACTGCCTCCTTCACCACTTTGAGACTGAGTGGATGACCACTTTGTTAAGGCAGCACTaGTTACAAAGCCAATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NCSQHCLLHHFETEWMTTLLRQH*LQSQSS Trigger: TGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAA...AGTGGTCATCCACTCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGCTGAGAGGCATCCATTGCAGAAGATAGCTGCACAAATGCAAACCCTCAGTCTTTTCCTGAAATaGTTAAGGCAGCACTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: EAAERHPLQKIAAQMQTLSLFLK*LRQHLL Trigger: TAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACT...GAGGGTTTGCATTTGTGCAGCTATCTTCTGCAATGGATGCCTCTCAGCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTTTGTTAAGGCAGCACTaGTTACAAAGCCAATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTSCSESNLSAPHRKHFSLLRQH*LQSQSS Trigger: TGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAA...ACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGAAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGTATAAATCTCTGAGTTaGATTCCAGCCTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TRALGLWHTSLILAFSRQYKSLS*IPAWST Trigger: TGTAGACCAGGCTGGAATCAAACTCAGAGATTTATA...CTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGTGTGCGGAGCTATGTTCCGAAGAATGATAGTATCACAGTAGTAATCCACTTCCTGTTCAGAGTCTaGTTACAAAGCCAATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HSVRSYVPKNDSITVVIHFLFRV*LQSQSS Trigger: TGAAGATTGGCTTTGTAACAAGACTCTGAACAGGAA...GTGGATTACTACTGTGATACTATCATTCTTCGGAACATAGCTCCGCACACTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192130.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAATGTCCATATTTTGCTaGTGTAAGTCGGAGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MKWFILKLLIAQGMPLETMSIFC*CKSESC Trigger: GCAGCTCTCCGACTTACACAAGCAAAATATGGACAT...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGAGAGCTGCTGGTGCCTaGCCAGGGCATCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGRAAGA*PGHLCL Trigger: CAAACAGAGATGCCCTGGTCAGGCACCAGCAGCTCT...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTGCTAGTGCTAGGCTGTaGTTCCTCAGTCGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DNHSELLKPPGSRDTTQAASARL*FLSRRA Trigger: GGCTCTCCGACTGAGGAAGCACAGCCTAGCACTAGC...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTGTCGGAGAGCTGCTGGTaGCTGACCAGGGCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NWNNGLLSGYRALHLGPLSESCW*LTRASL Trigger: CAGAGATGCCCTGGTCAGGCACCAGCAGCTCTCCGA...CAGAGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGGAAGGCCACGGAGCATaGTGGTCTTGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGEGHGA*WSCSLS Trigger: AGAGAGAGAGCAAGACCATCATGCTCCGTGGCCTTC...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | TGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTAGAGCTGCTGGTGCCTaGCCAGGGCATCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CNWNNGLLSGYRALHLGPRAAGA*PGHLCL Trigger: CAAACAGAGATGCCCTGGTCAGGCACCAGCAGCTCT...AGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACGTTCGAGCTAGCCTCTaGAGCTGGCACGTAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHVRASL*SWHVGL Trigger: GAGACCTACGTGCCAGCTGCAGAGGCTAGCTCGAAC...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTTCAGGGAGGAGTTGCTaGCTTTCAGCTAAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DNHSELLKPPGSRDTTQASGRSC*LSAKAP Trigger: GGGAGCCTTAGCTGAAAGGCAGCAACTCCTCCCTGA...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACGCTAGCCTCTGCAGCTaGCACGTAGGTCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHASLCS*HVGLLL Trigger: GAGAAGGAGACCTACGTGCCAGCTGCAGAGGCTAGC...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGGCAGGCCAGTCTGCTaGTTCGAGCTAGCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHGRPVC*FELASA Trigger: TGCAGAGGCTAGCTCGAACCAGCAGACTGGCCTGCC...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGCAGGGCATCTCTGTTTaGGAACTGACGTCGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGQGISV*ELTSAQ Trigger: CTGTGCCGACGTCAGTTCCCAAACAGAGATGCCCTG...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTGCTTGCGCTTGGGCTCTaGGGGCTCTGGAATTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: NWNNGLLSGYRALHLGPLLALGL*GLWNSV Trigger: TACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAG...CAGAGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTACTTGCGCTTGGGCTCTaGGGGCTCTGGAATTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVALVLTTTPSFSSPQEVLALGL*GLWNSV Trigger: TACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAG...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTGACTGCTTCTTGCGCTTaGGCTCTGGGGGCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NWNNGLLSGYRALHLGPLTASCA*ALGALE Trigger: TTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGT...CAGAGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR TCA 90 bp | GGAGATAGGGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGACTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDRAVMMESTTVCGAMFRLTSAG*GPSKDS Trigger: GGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAG...TCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCCCTATCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000192130.6 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGAAGGCTTCCAACTCCTaGTCGCTCAGCCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGKASNS*SLSLDL Trigger: AAGATCCAGGCTGAGCGAGCAGGAGTTGGAAGCCTT...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACACAACCCATAGGCACTaGCTTTGGCTCCCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHTTHRH*LWLPSQ Trigger: CTGGCTTGGGAGCCAAAGGCAGTGCCTATGGGTTGT...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTACTGCTTCTTGCGCTTaGGCTCTGGGGGCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGATASCA*ALGALE Trigger: TTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGT...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTGGAGCTGTGATGCCTTaGCACTTTCTTCCTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DNHSELLKPPGSRDTTQAGAVMP*HFLPKP Trigger: AGGCTTAGGAAGAAAGTGTCAAGGCATCACAGCTCC...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTTCAGGGAGGAGTTGCTaGCTTTCAGCTAAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGASGRSC*LSAKAP Trigger: GGGAGCCTTAGCTGAAAGGCAGCAACTCCTCCCTGA...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTGAAGGCTTCCAACTCCTaGTCGCTCAGCCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NWNNGLLSGYRALHLGPLKASNS*SLSLDL Trigger: AAGATCCAGGCTGAGCGAGCAGGAGTTGGAAGCCTT...CAGAGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | TGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCGCCAACCCATAGCCTaGAGCATCTTGTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CNWNNGLLSGYRALHLGPRQPIA*SILLPM Trigger: CATTGGCAACAAGATGCTGCAGGCTATGGGTTGGCG...AGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTCCTGCTCGCTCAGCCTaGATCTTCGGTAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPLFTVPQVGRKVVYPRPARSA*IFGRCP Trigger: TGGACATCTACCGAAGATCCAGGCTGAGCGAGCAGG...ACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACCCTGCTCGCTCAGCCTaGATCTTCGGTAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHPARSA*IFGRCP Trigger: TGGACATCTACCGAAGATCCAGGCTGAGCGAGCAGG...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAACACTGCCTCCTTCACCACTTTGAGACTGAGTGGATGACCACTGAGCAGGAAGGCCACGGAGCATaGTGGTCTTGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQHCLLHHFETEWMTTEQEGHGA*WSCSLS Trigger: AGAGAGAGAGCAAGACCATCATGCTCCGTGGCCTTC...CTGCTCAGTGGTCATCCACTCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGAGAGGCATCCATTGCAGAAGATAGCTGCACAAATGCAAACCCTCTGTCTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAERHPLQKIAAQMQTLCLTSAG*GPSKDS Trigger: GGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAG...ACAGAGGGTTTGCATTTGTGCAGCTATCTTCTGCAATGGATGCCTCTCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000193342.6 |
||
| CDS-3UTR TCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACGAGATAGGGCTGTCATaGTGGAATCCACCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHEIGLS*WNPPQC Trigger: ACACTGTGGTGGATTCCATCATGACAGCCCTATCTC...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACTTGAGACTGAGTGGATaGCCACTGAGCAGCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHLRLSG*PLSSSN Trigger: ATTGCTGCTGCTCAGTGGTCATCCACTCAGTCTCAA...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTATCTTTGGCAATCTGCTaGGCAGTTTTGCTCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVALVLTTTPSFSSPQEVSLAIC*AVLLLG Trigger: GCCCAAGAGCAAAACTGCTCAGCAGATTGCCAAAGA...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTGGGAGCTGTGATGCCTTaGCACTTTCTTCCTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NWNNGLLSGYRALHLGPLGAVMP*HFLPKP Trigger: AGGCTTAGGAAGAAAGTGTCAAGGCATCACAGCTCC...CAGAGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTACCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVALVLTTTPSFSSPQEVPQWEL*CLDTFF Trigger: GAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGG...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGAATTCAGGGAGGAGTTaGTGCCTTTCAGCTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGNSGRS*CLSAKA Trigger: AGCCTTAGCTGAAAGGCAGCAACTCCTCCCTGAATT...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTGTGCCAGCATCAAACTaGTTCTTGCGCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLFTVPQVGRKVVYPRVPASN*FLRLGS Trigger: AGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCAC...ACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTTGTTACTGTGGTCAATaGCATCTTTGGTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNHSELLKPPGSRDTTQACYCGQ*HLWWAA Trigger: AGCAGCCCACCAAAGATGGCATTGACCACAGTAACA...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACCGCCAACCCATAGCCTaGAGCATCTTGTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHRQPIA*SILLPM Trigger: CATTGGCAACAAGATGCTGCAGGCTATGGGTTGGCG...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGTCGGAGAGCCAGGTaGGTTGGAGGTCTGATTATA | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHSRRAR*VGGLII Trigger: TATAATCAGACCTCCAACCCACCTGGCTCTCCGACT...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACCCTTTCCCTCTTTTGTaGAAGGCAGGCCAGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHPFPLL*KAGQSA Trigger: AGCAGACTGGCCTGCCTTCCACAAAAGAGGGAAAGG...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTACTGCTTCTTGCGCTTaGGCTCTGGGGGCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVTASCA*ALGALE Trigger: TTCCAGAGCCCCCAGAGCCCAAGCGCAAGAAGCAGT...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| 3UTR CAA 72 bp | GAGCCTTCCCGCCAACCCATAGCCTGCAGCATCTTGTaGCCAATGTTACTGTGGTCAATGCCATCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPSRQPIACSIL*PMLLWSMPSLV Trigger: CACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGATGCTGCAGGCTATGGGTTGGCGGGAAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182371.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGGAAGGCCACGGAGCATaGTGGTCTTGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIKSPLSPLFTVPQVGREGHGA*WSCSLS Trigger: AGAGAGAGAGCAAGACCATCATGCTCCGTGGCCTTC...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTCAACACTGCCTCCTTCACCACTTTGAGACTGAGTGGATGACCACTGAGGAAGGCCACGGAGCATaGTGGTCTTGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSQHCLLHHFETEWMTTEEGHGA*WSCSLS Trigger: AGAGAGAGAGCAAGACCATCATGCTCCGTGGCCTTC...CTCAGTGGTCATCCACTCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| CDS-3UTR TCA 90 bp | AACTGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCNWNNGLLSGYRALHLGPQWEL*CLDTFF Trigger: GAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGG...ACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGAACTGTAGTCAACACTaGCTCCTTCACCACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGNCSQH*LLHHFE Trigger: CTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTT...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGCTCTCGTCTTTCTGCTaGTCGGTCTCTGTATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGLSSFC*SVSVFH Trigger: ATGAAATACAGAGACCGAGCAGCAGAAAGACGAGAG...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AACTGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTAATACCCTGCAAACCTaGACACCGAGCACCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NCNWNNGLLSGYRALHLGNTLQT*TPSTHE Trigger: TTCATGGGTGCTCGGTGTGCAGGTTTGCAGGGTATT...ACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTCACTTTGAGACTGAGTaGATGACCACTGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGAHFETE*MTTEQQ Trigger: CTGCTGCTCAGTGGTCATCCACTCAGTCTCAAAGTG...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTAGCGTTCCATGTCTTTaGCAATCTGCTGAGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DNHSELLKPPGSRDTTQASVPCL*QSAEQF Trigger: AAACTGCTCAGCAGATTGCCAAAGACATGGAACGCT...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGCAGGGCATCTCTGTTTaGGAACTGACGTCGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRQGISV*ELTSAQ Trigger: CTGTGCCGACGTCAGTTCCCAAACAGAGATGCCCTG...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGGGGCCTGCTCGCTCAGCCTaGATCTTCGGTAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RALGLWHTSLILAFSRQGPARSA*IFGRCP Trigger: TGGACATCTACCGAAGATCCAGGCTGAGCGAGCAGG...CCCCTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATAGAAGGCCACGGAGCATaGTGGTCTTGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVMMESTTVCGAMFRRMIEGHGA*WSCSLS Trigger: AGAGAGAGAGCAAGACCATCATGCTCCGTGGCCTTC...TATCATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000192130.6 |
||
| CDS-3UTR TCA 90 bp | AAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPIVPSVHSPSGGKEGCLPQWEL*CLDTFF Trigger: GAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGG...TAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACTTTCTTCATCTCCATTaGGCACCAATTCAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHFLHLH*APIQGG Trigger: TCCTCCCTGAATTGGTGCGCAATGGAGATGAAGAAA...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | TGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTCTCGTCTTTCTGCTaGTCGGTCTCTGTATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CNWNNGLLSGYRALHLGPLSSFC*SVSVFH Trigger: ATGAAATACAGAGACCGAGCAGCAGAAAGACGAGAG...AGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTTTTCTCTCGTCTTTCTaGTGCTCGGTCTCTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: DNHSELLKPPGSRDTTQAFLSSF*CSVSVF Trigger: AAATACAGAGACCGAGCAGCAGAAAGACGAGAGAAA...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGGGGGTGCCAGCATCAAACTaGTTCTTGCGCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RALGLWHTSLILAFSRQGVPASN*FLRLGS Trigger: AGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCAC...CCCCTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGCCTTTCCCTCTTTTGTaGAAGGCAGGCCAGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRPFPLL*KAGQSA Trigger: AGCAGACTGGCCTGCCTTCCACAAAAGAGGGAAAGG...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTGTGCGGAGCTATGTTCCGAAGAATGATAGTATCACAGTAGTAATCCACCTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSVRSYVPKNDSITVVIHLTSAG*GPSKDS Trigger: GGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAG...GTGGATTACTACTGTGATACTATCATTCTTCGGAACATAGCTCCGCACACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000192130.6 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTCTGCTGGTAATCCTGTaGGTATTGAGTGTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLFTVPQVGRKVVYPRLLVIL*VLSVLC Trigger: ACACAGTACACTCAATACTCACAGGATTACCAGCAG...ACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTTCTTTGGCAATCTGCTaGGCAGTTTTGCTCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVSLAIC*AVLLLG Trigger: GCCCAAGAGCAAAACTGCTCAGCAGATTGCCAAAGA...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAAGAGTCAAACTTGTCTaGTCCACATCGGAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VVALVLTTTPSFSSPQEVRVKLV*STSEAF Trigger: AAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCT...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTCTCTCGTCTTTCTGCTaGTCGGTCTCTGTATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGALSSFC*SVSVFH Trigger: ATGAAATACAGAGACCGAGCAGCAGAAAGACGAGAG...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTGCTCGTAATTCACAGTaGCAGCATCAAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLFTVPQVGRKVVYPRARNSQ*QHQTAS Trigger: AGAAGCAGTTTGATGCTGGCACTGTGAATTACGAGC...ACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCGCTAGCCTCTGCAGCTaGCACGTAGGTCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKEKPQIQLAQQPLPPILASLCS*HVGLLL Trigger: GAGAAGGAGACCTACGTGCCAGCTGCAGAGGCTAGC...GAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTGGCAGGCCAGTCTGCTaGTTCGAGCTAGCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRKTTDPTGSTAFTTHSGRPVC*FELASA Trigger: TGCAGAGGCTAGCTCGAACCAGCAGACTGGCCTGCC...AGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | TTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGGCTTATTTAAACTCTTaGCCCAGCGTTCCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTTTPSFSSPQEVGTQHRAYLNS*PSVPCL Trigger: AAGACATGGAACGCTGGGCCAAGAGTTTAAATAAGC...CCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACTCTCTCTCTCATCACTaGTGTCATGTCTATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHSLSHH*CHVYSH Trigger: ATGACTATAGACATGACATCAGTGATGAGAGAGAGA...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVVHPKTINSTRHALRDRLTSAG*GPSKDS Trigger: GGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAG...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCTCCTACAGAGAAGGCGCTaGCTCGGTTACCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRKTTDPTGSTAFTTHSLLQRRR*LGYHLE Trigger: TTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAG...GAGAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGCTTCTCTCAATGAATTaGCAGGTTGAAAGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGLLSMN*QVESCF Trigger: AAAACAGCTTTCAACCTGTCAATTCATTGAGAGAAG...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGTTCTTCTTCTCTCAATaGATTGACAGGTTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VALVLTTTPSFSSPQEVGFFFSQ*IDRLKA Trigger: AGCTTTCAACCTGTCAATTCATTGAGAGAAGAAGAA...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTAGAGCTGCTGGTGCCTaGCCAGGGCATCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQRKTTDPTGSTAFTTHSRAAGA*PGHLCL Trigger: CAAACAGAGATGCCCTGGTCAGGCACCAGCAGCTCT...AGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGGGGCACACCGAGCACCCATaGATGTCAGAGTCTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: RALGLWHTSLILAFSRQGHTEHP*MSESIL Trigger: AAGTATAGACTCTGACATTCATGGGTGCTCGGTGTG...CCCCTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTAGAGTCAAACTTGTCTaGTCCACATCGGAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGARVKLV*STSEAF Trigger: AAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCT...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTAAGAGCGTTCGAGCTAGCCTCTaGAGCTGGCACGTAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKLLIAQGMPLETGSKSVRASL*SWHVGL Trigger: GAGACCTACGTGCCAGCTGCAGAGGCTAGCTCGAAC...GCTCTTACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTATTTCTTCATCTCCATTaGGCACCAATTCAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPIVPSVHSPSGGKEGCLFLHLH*APIQGG Trigger: TCCTCCCTGAATTGGTGCGCAATGGAGATGAAGAAA...TAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACTGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGTGTTACTGTGGTCAATaGCATCTTTGGTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNCNWNNGLLSGYRALHLCYCGQ*HLWWAA Trigger: AGCAGCCCACCAAAGATGGCATTGACCACAGTAACA...CAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTGACTCGGTTACCATCTaGAAGGACCAAATCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGADSVTI*KDQIFS Trigger: AGAAAAGATTTGGTCCTTCCAGATGGTAACCGAGTC...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCCAGAACAGCAAGCACTCTCAACTGATAAACCATCTCTGCAAGTTTTACAGGGCATCTCTGTTTaGGAACTGACGTCGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPEQQALSTDKPSLQVLQGISV*ELTSAQ Trigger: CTGTGCCGACGTCAGTTCCCAAACAGAGATGCCCTG...TAAAACTTGCAGAGATGGTTTATCAGTTGAGAGTGCTTGCTGTTCTGGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGGGGCAATGCCATCTTTGGTaGGCTGCTCGTAATTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RALGLWHTSLILAFSRQGQCHLW*AARNSQ Trigger: CTGTGAATTACGAGCAGCCCACCAAAGATGGCATTG...CCCCTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCAATGCCATCTTTaGTGGGCTGCTCGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNCNWNNGLLSGYRALHLGQCHL*WAARNS Trigger: TGAATTACGAGCAGCCCACCAAAGATGGCATTGACC...CAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGTCCATAGTCACCATCTaGATGATAGCCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAVMMESTTVCGAMFRRMSIVTI*MIAIFR Trigger: TCTGAAGATGGCTATCATTCAGATGGTGACTATGGA...CATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000192130.6 |
||
| CDS-3UTR TCA 90 bp | AGTCAACACTGCCTCCTTCACCACTTTGAGACTGAGTGGATGACCACTGAGCAGTCCATAGTCACCATCTaGATGATAGCCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQHCLLHHFETEWMTTEQSIVTI*MIAIFR Trigger: TCTGAAGATGGCTATCATTCAGATGGTGACTATGGA...CTGCTCAGTGGTCATCCACTCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAATGGCTGTACTAGCTACAGAGAAGGCGCTGACTCGGTTACCATCTGGTCTCTCTCTCATCACTaGTGTCATGTCTATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNGCTSYREGADSVTIWSLSHH*CHVYSH Trigger: ATGACTATAGACATGACATCAGTGATGAGAGAGAGA...CCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAGCTAGTACAGCCATTGCTGCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| CDS-3UTR TCA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACTCTCTCTCTCATCACTaGTGTCATGTCTATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHSLSHH*CHVYSH Trigger: ATGACTATAGACATGACATCAGTGATGAGAGAGAGA...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCTCGAGATAGGGCTGTCATaGTGGAATCCACCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRKTTDPTGSTAFTTHSLEIGLS*WNPPQC Trigger: ACACTGTGGTGGATTCCATCATGACAGCCCTATCTC...GAGAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGCTGCTGGTAATCCTGTaGGTATTGAGTGTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRLLVIL*VLSVLC Trigger: ACACAGTACACTCAATACTCACAGGATTACCAGCAG...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGATCGGAGAGCTGCTGGTaGCTGACCAGGGCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNEVVHPKTINSTRHALRSESCW*LTRASL Trigger: CAGAGATGCCCTGGTCAGGCACCAGCAGCTCTCCGA...TCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACATCGGAGAGCTGCTGGTaGCTGACCAGGGCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKWFILKLLIAQGMPLETSESCW*LTRASL Trigger: CAGAGATGCCCTGGTCAGGCACCAGCAGCTCTCCGA...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGGGGGCTCGTAATTCACAGTaGCAGCATCAAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RALGLWHTSLILAFSRQGARNSQ*QHQTAS Trigger: AGAAGCAGTTTGATGCTGGCACTGTGAATTACGAGC...CCCCTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGGCTCGTAATTCACAGTaGCAGCATCAAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRARNSQ*QHQTAS Trigger: AGAAGCAGTTTGATGCTGGCACTGTGAATTACGAGC...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTCCTGCAGCATCTTGTTaGCAATGTTACTGTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVPAASC*QCYCGQ Trigger: TTGACCACAGTAACATTGGCAACAAGATGCTGCAGG...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGTCTCTCTCTCATCACTaGTGTCATGTCTATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVMMESTTVCGAMFRRMSLSHH*CHVYSH Trigger: ATGACTATAGACATGACATCAGTGATGAGAGAGAGA...CATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000192130.6 |
||
| CDS-3UTR TCA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTTTCTTCTTCTCTCAATaGATTGACAGGTTGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQVGRKVVYPRKGAFFFSQ*IDRLKA Trigger: AGCTTTCAACCTGTCAATTCATTGAGAGAAGAAGAA...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGTCTGCTGAGCAGTTTTaGTCTTGGGCTTTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRSAEQF*SWAFLS Trigger: AGAAAGAAAAGCCCAAGAGCAAAACTGCTCAGCAGA...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGAGCAAAGCCAGCATCTaGTGCGGCAGATTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVVHPKTINSTRHALRDRSKASI*CGRFSP Trigger: AGGAGAGAATCTGCCGCAGCAGATGCTGGCTTTGCT...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGAAGGCTTCCAACTCCTaGTCGCTCAGCCTGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVVHPKTINSTRHALRDRKASNS*SLSLDL Trigger: AAGATCCAGGCTGAGCGAGCAGGAGTTGGAAGCCTT...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTTTTCTCTCGTCTTTCTaGTGCTCGGTCTCTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVFLSSF*CSVSVF Trigger: AAATACAGAGACCGAGCAGCAGAAAGACGAGAGAAA...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCTCTGTTACTGTGGTCAATaGCATCTTTGGTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKTTDPTGSTAFTTHSLCYCGQ*HLWWAA Trigger: AGCAGCCCACCAAAGATGGCATTGACCACAGTAACA...GAGAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCGCCAACCCATAGCCTaGAGCATCTTGTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EVVHPKTINSTRHALRDRRQPIA*SILLPM Trigger: CATTGGCAACAAGATGCTGCAGGCTATGGGTTGGCG...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGACTCGGTTACCATCTaGAAGGACCAAATCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVDSVTI*KDQIFS Trigger: AGAAAAGATTTGGTCCTTCCAGATGGTAACCGAGTC...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCTCCAGGTACTGCATACTTaGTACCAGGAACTACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRKTTDPTGSTAFTTHSLQVLHT*YQELHQ Trigger: CTGGTGTAGTTCCTGGTACCAAGTATGCAGTACCTG...GAGAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAAGGCGCTGACTCGGTTACCATCTGGAAGGACCAAATCTTTTCTGGCATCTCTCTCTCATCACTaGTGTCATGTCTATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEKALTRLPSGRTKSFLASLSHH*CHVYSH Trigger: ATGACTATAGACATGACATCAGTGATGAGAGAGAGA...TGCCAGAAAAGATTTGGTCCTTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| CDS-3UTR TCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTACTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLLTSAG*GPSKDS Trigger: GGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAG...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGTTGAGACTGAGTGGATaGCCACTGAGCAGCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVVHPKTINSTRHALRDRLRLSG*PLSSSN Trigger: ATTGCTGCTGCTCAGTGGTCATCCACTCAGTCTCAA...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTACTTGCGCTTGGGCTCTaGGGGCTCTGGAATTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLLALGL*GLWNSV Trigger: TACGGAATTCCAGAGCCCCCAGAGCCCAAGCGCAAG...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCGGTCAATGCCATCTTTaGTGGGCTGCTCGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKEKPQIQLAQQPLPPILGQCHL*WAARNS Trigger: TGAATTACGAGCAGCCCACCAAAGATGGCATTGACC...GAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATAGTTCCATAGTCACCATCTaGATGATAGCCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHDGIHHSVRSYVPKNDSSIVTI*MIAIFR Trigger: TCTGAAGATGGCTATCATTCAGATGGTGACTATGGA...ACTATCATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000192130.6 |
||
| CDS-3UTR TCA 90 bp | CATCGGAAGCATTTTAGTCTTTTCCTGAAATTGTTAAGGCAGCACTTGTTACAAGAAGGCCACGGAGCATaGTGGTCTTGCTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRKHFSLFLKLLRQHLLQEGHGA*WSCSLS Trigger: AGAGAGAGAGCAAGACCATCATGCTCCGTGGCCTTC...TTGTAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACTAAAATGCTTCCGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTCTTCTCTCAATGAATTaGCAGGTTGAAAGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVLLSMN*QVESCF Trigger: AAAACAGCTTTCAACCTGTCAATTCATTGAGAGAAG...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGTGCCAGCATCAAACTaGTTCTTGCGCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNEVVHPKTINSTRHALRVPASN*FLRLGS Trigger: AGAGCCCAAGCGCAAGAAGCAGTTTGATGCTGGCAC...TCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCCAGAACAGCAAGCACTCTCAACTGATAAACCATCTCTGCAAGTTTTACCTGCAGCATCTTGTTaGCAATGTTACTGTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPEQQALSTDKPSLQVLPAASC*QCYCGQ Trigger: TTGACCACAGTAACATTGGCAACAAGATGCTGCAGG...TAAAACTTGCAGAGATGGTTTATCAGTTGAGAGTGCTTGCTGTTCTGGCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCCCTGCAGCATCTTGTTaGCAATGTTACTGTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKEKPQIQLAQQPLPPILPAASC*QCYCGQ Trigger: TTGACCACAGTAACATTGGCAACAAGATGCTGCAGG...GAGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGTAGCCATCCTGGCCTaGCTGCATGTAACTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNEVVHPKTINSTRHALRVAILA*LHVTVV Trigger: GACTACAGTTACATGCAGCCAGGCCAGGATGGCTAC...TCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTCAATGCCATCTTTGGTaGGCTGCTCGTAATTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WFILKLLIAQGMPLETGSQCHLW*AARNSQ Trigger: CTGTGAATTACGAGCAGCCCACCAAAGATGGCATTG...ACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| 3UTR CAA 72 bp | CATTTACACTATATACACCTTAGTATAAAAAGCCCATaGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLHYIHLSIKSP*SPLFTVPQVGR Trigger: CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAGGTGTATATAGTGTAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTACTACAGAGAAGGCGCTaGCTCGGTTACCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLLQRRR*LGYHLE Trigger: TTCCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAG...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTAAGCAAAGCCAGCATCTaGTGCGGCAGATTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLSKASI*CGRFSP Trigger: AGGAGAGAATCTGCCGCAGCAGATGCTGGCTTTGCT...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCCAGAACAGCAAGCACTCTCAACTGATAAACCATCTCTGCAAGTTTTATTTCTCTCGTCTTTCTaGTGCTCGGTCTCTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPEQQALSTDKPSLQVLFLSSF*CSVSVF Trigger: AAATACAGAGACCGAGCAGCAGAAAGACGAGAGAAA...TAAAACTTGCAGAGATGGTTTATCAGTTGAGAGTGCTTGCTGTTCTGGCAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAAGTCGGAGAGCCAGGTaGGTTGGAGGTCTGATTATA | + |
|
Preference number: 4 (lower is better) Translates to: MKWFILKLLIAQGMPLETSRRAR*VGGLII Trigger: TATAATCAGACCTCCAACCCACCTGGCTCTCCGACT...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGAGCGTTCCATGTCTTTaGCAATCTGCTGAGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EVVHPKTINSTRHALRDRSVPCL*QSAEQF Trigger: AAACTGCTCAGCAGATTGCCAAAGACATGGAACGCT...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTTCCATAGTCACCATCTaGATGATAGCCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WFILKLLIAQGMPLETGSSIVTI*MIAIFR Trigger: TCTGAAGATGGCTATCATTCAGATGGTGACTATGGA...ACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTAAGAGCTCCATAGTCACCATCTaGATGATAGCCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKLLIAQGMPLETGSKSSIVTI*MIAIFR Trigger: TCTGAAGATGGCTATCATTCAGATGGTGACTATGGA...GCTCTTACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTTCTGCTGAGCAGTTTTaGTCTTGGGCTTTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFILKLLIAQGMPLETGSSAEQF*SWAFLS Trigger: AGAAAGAAAAGCCCAAGAGCAAAACTGCTCAGCAGA...ACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAAATTCAGGGAGGAGTTaGTGCCTTTCAGCTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKWFILKLLIAQGMPLETNSGRS*CLSAKA Trigger: AGCCTTAGCTGAAAGGCAGCAACTCCTCCCTGAATT...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTACACTTTGAGACTGAGTaGATGACCACTGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLHFETE*MTTEQQ Trigger: CTGCTGCTCAGTGGTCATCCACTCAGTCTCAAAGTG...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTTTACCACCCATTCTCTCAATAAAGACACAGGAAACCCAGTTTTGAAGGCTTATTTAAACTCTTaGCCCAGCGTTCCATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAFTTHSLNKDTGNPVLKAYLNS*PSVPCL Trigger: AAGACATGGAACGCTGGGCCAAGAGTTTAAATAAGC...CTTCAAAACTGGGTTTCCTGTGTCTTTATTGAGAGAATGGGTGGTAAAGGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGTCAATGCCATCTTTaGTGGGCTGCTCGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: MKWFILKLLIAQGMPLETGQCHL*WAARNS Trigger: TGAATTACGAGCAGCCCACCAAAGATGGCATTGACC...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAAACTGTAGTCAACACTaGCTCCTTCACCACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MKWFILKLLIAQGMPLETNCSQH*LLHHFE Trigger: CTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTT...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTACAATGCCATCTTTGGTaGGCTGCTCGTAATTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLQCHLW*AARNSQ Trigger: CTGTGAATTACGAGCAGCCCACCAAAGATGGCATTG...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTATGTCAGGTACATACTTaGTACCAGGAACTACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFKVGEPLRMKWFILKLLCQVHT*YQELHQ Trigger: CTGGTGTAGTTCCTGGTACCAAGTATGTACCTGACA...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035199.13 |
||
| CDS-3UTR CAA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTGCATCAAACTGCTTCTaGCGCTTGGGCTCTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DNHSELLKPPGSRDTTQAASNCF*RLGSGG Trigger: GCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGC...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | AACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTCCTCTGGCATCAAACTGCTTCTaGCGCTTGGGCTCTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NWNNGLLSGYRALHLGPLASNCF*RLGSGG Trigger: GCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGC...CAGAGGACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CAA 90 bp | TACACCAGTAGGGGAAGCAGCGGGGGCCTGTGTACTTGTGCTAGTGCTAGGCTGCGGAGCATGATGGTCTaGCTCTCTCTCTCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YTSRGSSGGLCTCASARLRSMMV*LSLSSL Trigger: CAGTGATGAGAGAGAGAGCAAGACCATCATGCTCCG...CAGCCTAGCACTAGCACAAGTACACAGGCCCCCGCTGCTTCCCCTACTGGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| CDS-3UTR CAA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTCGGAGCATGATGGTCTaGCTCTCTCTCTCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: DNHSELLKPPGSRDTTQARSMMV*LSLSSL Trigger: CAGTGATGAGAGAGAGAGCAAGACCATCATGCTCCG...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | TTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCGGAGCATGATGGTCTaGCTCTCTCTCTCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTTTPSFSSPQEVGTQHRRSMMV*LSLSSL Trigger: CAGTGATGAGAGAGAGAGCAAGACCATCATGCTCCG...CCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTGCCTGCAGCATCTTGTaGCCAATGTTACTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DNHSELLKPPGSRDTTQAACSIL*PMLLWS Trigger: TGACCACAGTAACATTGGCAACAAGATGCTGCAGGC...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGTCGGAGAGCCAGGTGGGTTGGAGGTCTGATTATAGAGTTGGGGACTTTGCGGAGCATGATGGTCTaGCTCTCTCTCTCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRRARWVGGLIIELGTLRSMMV*LSLSSL Trigger: CAGTGATGAGAGAGAGAGCAAGACCATCATGCTCCG...CAAAGTCCCCAACTCTATAATCAGACCTCCAACCCACCTGGCTCTCCGACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAATGGCTGTACTAGCTACAGAGAAGGCGCTGACTCGGTTACCATCTGGCGGAGCATGATGGTCTaGCTCTCTCTCTCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSNGCTSYREGADSVTIWRSMMV*LSLSSL Trigger: CAGTGATGAGAGAGAGAGCAAGACCATCATGCTCCG...CCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAGCTAGTACAGCCATTGCTGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000193342.6 |
||
| CDS-3UTR CAA 90 bp | TTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTTCTCCTTTCCCTCTTTaGTGGAAGGCAGGCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPLFTVPQVGRKVVYPRSPFPL*WKAGQS Trigger: AGACTGGCCTGCCTTCCACAAAAGAGGGAAAGGAGA...ACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | TTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGTGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTTTPSFSSPQEVGTQHRCSESN*SAPHRK Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...CCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACTTTTCTTCATCTCCATaGCGCACCAATTCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHFSSSP*RTNSGR Trigger: CCTCCCTGAATTGGTGCGCAATGGAGATGAAGAAAA...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGCCTGCAGCATCTTGTaGCCAATGTTACTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHACSIL*PMLLWS Trigger: TGACCACAGTAACATTGGCAACAAGATGCTGCAGGC...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | AACTGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGGGTGCCTGCAGCATCTTGTaGCCAATGTTACTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NCNWNNGLLSGYRALHLGACSIL*PMLLWS Trigger: TGACCACAGTAACATTGGCAACAAGATGCTGCAGGC...ACCCAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACTCAGGTACTGCATACTaGGTACCAGGAACTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHSGTAY*VPGTTP Trigger: TGGTGTAGTTCCTGGTACCAAGTATGCAGTACCTGA...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
||
| CDS TCA 90 bp | CGGCTTACACCTGTTTTCCTCTTCATCAGCCTCACATCTGCAGGCTaGGGGCCTTCAAAGGACTCCATCATTTCTCGAATATCGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLTPVFLFISLTSAG*GPSKDSIISRISLS Trigger: CGAGAGCGATATTCGAGAAATGATGGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAGGCTGATGAAGAGGAAAACAGGTGTAAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035199.13 ENSMUST00000182304.8 ENSMUST00000182659.8 ENSMUST00000193342.6 |
||
| CDS-3UTR CAA 90 bp | GACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGGCTCTCTCCGATCATCGCTaGATCTTTTGTAATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DNHSELLKPPGSRDTTQALSDHR*IFCNLS Trigger: ACTCAGATTACAAAAGATCAAGCGATGATCGGAGAG...AGCCTGTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACGTAAGGGAGCTCCAGCTGGTAGCATCTaGCAAGTGATAAAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFTVPQVGRKVVYPRKGAPAGSI*QVIKLH Trigger: GTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGG...AGCTCCCTTACGTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACTGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHCSESN*SAPHRK Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGTCTCCTTTCCCTCTTTaGTGGAAGGCAGGCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRSPFPL*WKAGQS Trigger: AGACTGGCCTGCCTTCCACAAAAGAGGGAAAGGAGA...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACTGCTTATTTAAACTCTaGGCCCAGCGTTCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHCLFKL*AQRSMS Trigger: AGACATGGAACGCTGGGCCAAGAGTTTAAATAAGCA...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS TCA 90 bp | AGCACCCATGAATGTCAGAGTCTATACTTACCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTCCTAAGCCTGAGCCTTCCCGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: STHECQSLYLPQWEL*CLDTFFLSLSLPAN Trigger: GTTGGCGGGAAGGCTCAGGCTTAGGAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGGTAAGTATAGACTCTGACATTCATGGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
||
| CDS-3UTR CAA 90 bp | CATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTACCCACTGCTTATTTAAACTCTaGGCCCAGCGTTCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCPLCSQSLRWEGRLFTHCLFKL*AQRSMS Trigger: AGACATGGAACGCTGGGCCAAGAGTTTAAATAAGCA...GTGGGTAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTATTTTCTTCATCTCCATaGCGCACCAATTCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPIVPSVHSPSGGKEGCLFSSSP*RTNSGR Trigger: CCTCCCTGAATTGGTGCGCAATGGAGATGAAGAAAA...TAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAATGGCTGTACTAGCTACAGAGAAGGCGCTGACTCGGTTACCATCTGGCTCTCCGATCATCGCTaGATCTTTTGTAATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSNGCTSYREGADSVTIWLSDHR*IFCNLS Trigger: ACTCAGATTACAAAAGATCAAGCGATGATCGGAGAG...CCAGATGGTAACCGAGTCAGCGCCTTCTCTGTAGCTAGTACAGCCATTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 |
||
| CDS-3UTR CAA 90 bp | GGAGATAGGGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGACTCTCCGATCATCGCTaGATCTTTTGTAATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GDRAVMMESTTVCGAMFRLSDHR*IFCNLS Trigger: ACTCAGATTACAAAAGATCAAGCGATGATCGGAGAG...TCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCCCTATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000192130.6 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGAGAGGCATCCATTGCAGAAGATAGCTGCACAAATGCAAACCCTCTGTCCAGCTGGTAGCATCTaGCAAGTGATAAAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAERHPLQKIAAQMQTLCPAGSI*QVIKLH Trigger: GTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGG...ACAGAGGGTTTGCATTTGTGCAGCTATCTTCTGCAATGGATGCCTCTCAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193342.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VALVLTTTPSFSSPQEVGDCYNA*QCAFLE Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...CCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTGTTTAATGTCCATATTTTGCTaGTGTAAGTCGGAGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPIVPSVHSPSGGKEGCLMSIFC*CKSESC Trigger: GCAGCTCTCCGACTTACACAAGCAAAATATGGACAT...TAAACAACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | AGGGCACTAGGCCTATGGCACACATCTTTAATTCTAGCATTCTCTAGGCAGGGGATAGCCTGCAGCATCTaGTTGCCAATGTTACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RALGLWHTSLILAFSRQGIACSI*LPMLLW Trigger: CCACAGTAACATTGGCAACAAGATGCTGCAGGCTAT...CCCCTGCCTAGAGAATGCTAGAATTAAAGATGTGTGCCATAGGCCTAGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
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| CDS-3UTR CAA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTATAGCCTGCAGCATCTaGTTGCCAATGTTACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVIACSI*LPMLLW Trigger: CCACAGTAACATTGGCAACAAGATGCTGCAGGCTAT...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | GTGGTGGCTTTGGTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: VVALVLTTTPSFSSPQEVDCYNA*QCAFLE Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...TACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACACCAAAGCCACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | GTGTTGACAACCACTCCGAGCTTCTCAAGCCCCCAGGAAGTAGGGACACAACACAGTCTTTTCCTGAAATaGTTAAGGCAGCACTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: VLTTTPSFSSPQEVGTQHSLFLK*LRQHLL Trigger: TAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACT...GTGTTGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | AAAAACTGCAACTGGAATAACGGACTCCTAAGTGGGTACAGGGCACTGCACCTGATGTCCATATTTTGCTaGTGTAAGTCGGAGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: KNCNWNNGLLSGYRALHLMSIFC*CKSESC Trigger: GCAGCTCTCCGACTTACACAAGCAAAATATGGACAT...CAGGTGCAGTGCCCTGTACCCACTTAGGAGTCCGTTATTCCAGTTGCAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGCATCAAACTGCTTCTaGCGCTTGGGCTCTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: MKWFILKLLIAQGMPLETASNCF*RLGSGG Trigger: GCCCCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGC...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTCTCTCCGATCATCGCTaGATCTTTTGTAATCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVLSDHR*IFCNLS Trigger: ACTCAGATTACAAAAGATCAAGCGATGATCGGAGAG...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | AGTCAACACTGCCTCCTTCACCACTTTGAGACTGAGTGGATGACCACTGAGCAGGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: SQHCLLHHFETEWMTTEQDCYNA*QCAFLE Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...CTGCTCAGTGGTCATCCACTCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193342.6 |
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| CDS-3UTR CAA 90 bp | ATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAAGGTTTTGTTAAGGCAGCACTaGTTACAAAGCCAATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: IKSPLSPLFTVPQVGRKVLLRQH*LQSQSS Trigger: TGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAA...AACCTTCCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGTTCTGTTGTGTCTGTTaGTCTTTTATGAGGCGAATG | + |
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Preference number: 5 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRFCCVC*SFMRRM Trigger: CATTCGCCTCATAAAAGACAAACAGACACAACAGAA...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | CTTCCTGTTCAGAGTCTTGTTACAAAGCCAATCTTCAAATTTAGGTCTGGGATTCGGAGCATGATGGTCTaGCTCTCTCTCTCATCACTG | + |
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Preference number: 5 (lower is better) Translates to: LPVQSLVTKPIFKFRSGIRSMMV*LSLSSL Trigger: CAGTGATGAGAGAGAGAGCAAGACCATCATGCTCCG...AATCCCAGACCTAAATTTGAAGATTGGCTTTGTAACAAGACTCTGAACAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192130.6 |
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| CDS-3UTR CAA 90 bp | AAACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTCCAGCTGGTAGCATCTaGCAAGTGATAAAACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: KQRKTTDPTGSTAFTTHSPAGSI*QVIKLH Trigger: GTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGG...AGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | CTTAGTATAAAAAGCCCATTGTCCCCTCTGTTCACAGTCCCTCAGGTGGGAAGGAGTCTTTTCCTGAAATaGTTAAGGCAGCACTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: LSIKSPLSPLFTVPQVGRSLFLK*LRQHLL Trigger: TAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACT...CCTTCCCACCTGAGGGACTGTGAACAGAGGGGACAATGGGCTTTTTATACTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | GAGGATGGAGACTCTGTAATATCTGAAGCAGCTGAGAGGCATCCATTGCAGAAGTTCCTGTTCAGAGTCTaGTTACAAAGCCAATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: EDGDSVISEAAERHPLQKFLFRV*LQSQSS Trigger: TGAAGATTGGCTTTGTAACAAGACTCTGAACAGGAA...CTTCTGCAATGGATGCCTCTCAGCTGCTTCAGATATTACAGAGTCTCCATCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193342.6 |
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| CDS TCA 90 bp | ATCACTGATGTCATGTCTATAGTCATGTTCTCCATAGTCACCATCTaGATGATAGCCATCTTCAGACCGGTCACTGTTCCTTCTTTCACG | + |
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Preference number: 5 (lower is better) Translates to: ITDVMSIVMFSIVTI*MIAIFRPVTVPSFT Trigger: CGTGAAAGAAGGAACAGTGACCGGTCTGAAGATGGCTATCATTCAGATGGTGACTATGGAGAACATGACTATAGACATGACATCAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035199.13 ENSMUST00000182022.8 ENSMUST00000182304.8 ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000182659.8 ENSMUST00000183248.3 ENSMUST00000192130.6 ENSMUST00000193342.6 |
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| CDS-3UTR CAA 90 bp | TGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGCAGTATGTCCATATTTTGCTaGTGTAAGTCGGAGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: WFILKLLIAQGMPLETGSMSIFC*CKSESC Trigger: GCAGCTCTCCGACTTACACAAGCAAAATATGGACAT...ACTGCCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAATAGCCTGCAGCATCTaGTTGCCAATGTTACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: MKWFILKLLIAQGMPLETIACSI*LPMLLW Trigger: CCACAGTAACATTGGCAACAAGATGCTGCAGGCTAT...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAGAAAAACCACAGATCCAACTGGCTCAACAGCCTTTACCACCCATTCTTTGTTAAGGCAGCACTaGTTACAAAGCCAATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KQRKTTDPTGSTAFTTHSLLRQH*LQSQSS Trigger: TGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAA...AGAATGGGTGGTAAAGGCTGTTGAGCCAGTTGGATCTGTGGTTTTTCTTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | GAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACAGGTTCTGTTGTGTCTGTTaGTCTTTTATGAGGCGAATG | + |
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Preference number: 5 (lower is better) Translates to: EVVHPKTINSTRHALRDRFCCVC*SFMRRM Trigger: CATTCGCCTCATAAAAGACAAACAGACACAACAGAA...CCTGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035199.13 ENSMUST00000182659.8 |
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| CDS-3UTR CAA 90 bp | TCATTTAAGGTAGGAGAACCCCTCAGAATGAAGTGGTTCATCCTAAAACTATTAGTGTCAGGTACATACTaGGTACCAGGAACTACACCA | + |
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Preference number: 5 (lower is better) Translates to: SFKVGEPLRMKWFILKLLVSGTY*VPGTTP Trigger: TGGTGTAGTTCCTGGTACCAAGTATGTACCTGACAC...TAATAGTTTTAGGATGAACCACTTCATTCTGAGGGGTTCTCCTACCTTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035199.13 |
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| CDS-3UTR CAA 90 bp | ATGAAGTGGTTCATCCTAAAACTATTAATAGCACAAGGCATGCCCTTAGAGACACTCTCCGATCATCGCTaGATCTTTTGTAATCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: MKWFILKLLIAQGMPLETLSDHR*IFCNLS Trigger: ACTCAGATTACAAAAGATCAAGCGATGATCGGAGAG...TGTCTCTAAGGGCATGCCTTGTGCTATTAATAGTTTTAGGATGAACCACTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035199.13 ENSMUST00000182371.8 ENSMUST00000182659.8 |
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| CDS CAA 72 bp | GATAGTCATCATATCTATCACCTCTCCGATCATCGCTaGATCTTTTGTAATCTGAGTCCCGCCGCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DSHHIYHLSDHR*IFCNLSPAACF Trigger: GAAGCAGGCGGCGGGACTCAGATTACAAAAGATCAAGCGATGATCGGAGAGGTGATAGATATGATGACTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000035199.13 ENSMUST00000182022.8 ENSMUST00000182304.8 ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000182659.8 ENSMUST00000183248.3 ENSMUST00000192130.6 |
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| CDS TCA 72 bp | GAATGTCAGAGTCTATACTTACCTCAATGGGAGCTGTaGTGCCTTGACACTTTCTTCCTAAGCCTGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ECQSLYLPQWEL*CLDTFFLSLSL Trigger: AAGGCTCAGGCTTAGGAAGAAAGTGTCAAGGCATCACAGCTCCCATTGAGGTAAGTATAGACTCTGACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182026.2 |
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| CDS TCA 72 bp | GTCATGTCTATAGTCATGTTCTCCATAGTCACCATCTaGATGATAGCCATCTTCAGACCGGTCACTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VMSIVMFSIVTI*MIAIFRPVTVP Trigger: AGGAACAGTGACCGGTCTGAAGATGGCTATCATTCAGATGGTGACTATGGAGAACATGACTATAGACATGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000035199.13 ENSMUST00000182022.8 ENSMUST00000182304.8 ENSMUST00000182371.8 ENSMUST00000182421.8 ENSMUST00000182659.8 ENSMUST00000183248.3 ENSMUST00000192130.6 ENSMUST00000193342.6 |
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