Pregenerated sensors for RBM4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033760Ensembl transcript IDs: ENSMUST00000036744.8, ENSMUST00000182200.2, ENSMUST00000182821.8, ENSMUST00000235278.2, ENSMUST00000236160.2, ENSMUST00000236797.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTACTCAAGTGAATGAAGACCAAAGGCAGGCAGGCAGGAGCCCATaGAGTTGTGGAGAAGGAGCTTGGCGAATACAATGGGGAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: STQVNEDQRQAGRSP*SCGEGAWRIQWGRL Trigger: AAGCCTTCCCCATTGTATTCGCCAAGCTCCTTCTCCACAACTGCATGGGCTCCTGCCTGCCTGCCTTTGGTCTTCATTCACTTGAGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR CCA 90 bp | CTTACTCAGCTCTACCTACCTGCCTGTGTCCCAAGTGCTAGGATTTaGGTGTGTGCCACCACCTACTGGCCAGAATTTAAGAGTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LTQLYLPACVPSARI*VCATTYWPEFKSQL Trigger: CAGCTGACTCTTAAATTCTGGCCAGTAGGTGGTGGCACACACCCAAATCCTAGCACTTGGGACACAGGCAGGTAGGTAGAGCTGAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR TCA 90 bp | CTACTTCTCTGCCTAGGCAACTTAAGACTTGTGACAGTACTCAAGTaGATGAAGACCAAAGGCAGGCAGGCAGGAGCCCATGCAGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLLCLGNLRLVTVLK*MKTKGRQAGAHAVV Trigger: CACAACTGCATGGGCTCCTGCCTGCCTGCCTTTGGTCTTCATTCACTTGAGTACTGTCACAAGTCTTAAGTTGCCTAGGCAGAGAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR CCA 90 bp | GCCTGTGTCCCAAGTGCTAGGATTTGGGTGTGTGCCACCACCTACTaGCCAGAATTTAAGAGTCAGCTGAGTGAATTTTGGCTCTATCAT | + |
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Preference number: 1 (lower is better) Translates to: ACVPSARIWVCATTY*PEFKSQLSEFWLYH Trigger: ATGATAGAGCCAAAATTCACTCAGCTGACTCTTAAATTCTGGCCAGTAGGTGGTGGCACACACCCAAATCCTAGCACTTGGGACACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR TCA 90 bp | GGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGTaGTGTTCTTGGATCAGTTCTGTTAGGGTGAGACCCGAATTTGGA | + |
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Preference number: 1 (lower is better) Translates to: GQILVLICANRLQKL*CSWISSVRVRPEFG Trigger: TCCAAATTCGGGTCTCACCCTAACAGAACTGATCCAAGAACATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| 3UTR TCA 90 bp | ATCGACTTCAAAAGCTGTGATGTTCTTGGATCAGTTCTGTTAGGGTaGGACCCGAATTTGGATCCCCAACAGTTGTGGAGTATTTCATCC | + |
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Preference number: 1 (lower is better) Translates to: IDFKSCDVLGSVLLG*DPNLDPQQLWSISS Trigger: GGATGAAATACTCCACAACTGTTGGGGATCCAAATTCGGGTCTCACCCTAACAGAACTGATCCAAGAACATCACAGCTTTTGAAGTCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| 3UTR GCA 90 bp | CCTCTACTTAATACAGACACAGGGCCAAATCTTGGTCTTGATCTGTaGCAATCGACTTCAAAAGCTGTGATGTTCTTGGATCAGTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: PLLNTDTGPNLGLDL*QSTSKAVMFLDQFC Trigger: ACAGAACTGATCCAAGAACATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTGTATTAAGTAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| 3UTR TCA 90 bp | GAAGGAGCTTGGCGAATACAATGGGGAAGGCTTACTTCCCCAGAGTaGATTATGCTAAGAGTAGTAAACATAACCTGTTCTTTGCATTTA | + |
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Preference number: 1 (lower is better) Translates to: EGAWRIQWGRLTSPE*IMLRVVNITCSLHL Trigger: TAAATGCAAAGAACAGGTTATGTTTACTACTCTTAGCATAATTCACTCTGGGGAAGTAAGCCTTCCCCATTGTATTCGCCAAGCTCCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR TCA 90 bp | CTTGCCATTCCAGTACTGTACACATTTCTTGAAATAGGGAAACACTaGATTTCCTGTGTCACCATCTATAAGATTTTGGCACATCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LAIPVLYTFLEIGKH*ISCVTIYKILAHQK Trigger: TTTCTGATGTGCCAAAATCTTATAGATGGTGACACAGGAAATTCAGTGTTTCCCTATTTCAAGAAATGTGTACAGTACTGGAATGGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTGTGTCCCAAGTGCTAGGATTTGGGTGTGTGCCACCACCTACTGGCCAGGCAGGCAGGAGCCCATaGAGTTGTGGAGAAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LPVSQVLGFGCVPPPTGQAGRSP*SCGEGA Trigger: AGCTCCTTCTCCACAACTGCATGGGCTCCTGCCTGC...CTGGCCAGTAGGTGGTGGCACACACCCAAATCCTAGCACTTGGGACACAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGCGGAAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTAACTCTCAAAGGCTTCTaGGTCCACCACAAACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VCGSCSRRRHSFVRSDAVTLKGF*VHHKPA Trigger: TGCTGGTTTGTGGTGGACCCAGAAGCCTTTGAGAGT...TACCGCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTTCCGCATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTGTGTCCCAAGTGCTAGGATTTGGGTGTGTGCCACCACCTACTGGCCAGGGCAGAAGCCACTCTTaGAGCCCTGTGGTCTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LPVSQVLGFGCVPPPTGQGRSHS*SPVVLC Trigger: ACACAAGACCACAGGGCTTCAAGAGTGGCTTCTGCC...CTGGCCAGTAGGTGGTGGCACACACCCAAATCCTAGCACTTGGGACACAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTGTGTCCCAAGTGCTAGGATTTGGGTGTGTGCCACCACCTACTGGCCAGGAAGTGGAGTTGAGGTaGCTGGGTACAGCTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LPVSQVLGFGCVPPPTGQEVELR*LGTAEL Trigger: GAGCTCAGCTGTACCCAGTCACCTCAACTCCACTTC...CTGGCCAGTAGGTGGTGGCACACACCCAAATCCTAGCACTTGGGACACAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAACTGCGGGAAGCACAGCCGCATTCCGACGTAGTGGGCTCCTGTCCCTTCGCTTGGCGAATACAATaGGGAAGGCTTACTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LQLREAQPHSDVVGSCPFAWRIQ*GRLTSP Trigger: TGGGGAAGTAAGCCTTCCCCATTGTATTCGCCAAGC...GAAGGGACAGGAGCCCACTACGTCGGAATGCGGCTGTGCTTCCCGCAGTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGCGGAAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTAGTCCGGATGGTTACTTaGGAACAGCTTCTTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VCGSCSRRRHSFVRSDAVVRMVT*EQLLCG Trigger: ACCACAAAGAAGCTGTTCCCAAGTAACCATCCGGAC...TACCGCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTTCCGCATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236160.2 |
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| 3UTR CAA 90 bp | GGCTCCTGTCCCTTCCATAATAGGAAGAGGAAGCGGCAGCAGCCATaGCAGCTGAGGTGGCAGCAGAGCCAGAGTTCTGCAATAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GSCPFHNRKRKRQQP*QLRWQQSQSSAIGV Trigger: GACACCTATTGCAGAACTCTGGCTCTGCTGCCACCTCAGCTGCAATGGCTGCTGCCGCTTCCTCTTCCTATTATGGAAGGGACAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182200.2 ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR CAA 90 bp | CCAAAGGCAGGCAGGCAGGAGCCCATGCAGTTGTGGAGAAGGAGCTaGGCGAATACAATGGGGAAGGCTTACTTCCCCAGAGTGAATTAT | + |
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Preference number: 2 (lower is better) Translates to: PKAGRQEPMQLWRRS*ANTMGKAYFPRVNY Trigger: ATAATTCACTCTGGGGAAGTAAGCCTTCCCCATTGTATTCGCCAAGCTCCTTCTCCACAACTGCATGGGCTCCTGCCTGCCTGCCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAACTGCGGGAAGCACAGCCGCATTCCGACGTAGTGGGCTCCTGTCCCTTCATAAGGTGTGCGCACTaGTCCATATTGTTCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: LQLREAQPHSDVVGSCPFIRCAH*SILFIV Trigger: TACAATGAACAATATGGAGCAGTGCGCACACCTTAT...GAAGGGACAGGAGCCCACTACGTCGGAATGCGGCTGTGCTTCCCGCAGTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182200.2 ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGCGGAAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTATTGCATTTAAAAGAATaGCAGAAGCCACTCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VCGSCSRRRHSFVRSDAVLHLKE*QKPLLK Trigger: CTTCAAGAGTGGCTTCTGCCATTCTTTTAAATGCAA...TACCGCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTTCCGCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTAGCAGCCATTGCAGCTaGGGTGGCAGCAGAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ARLRGASTVQEKGCQHNPSSHCS*GGSRAR Trigger: TCTGGCTCTGCTGCCACCTCAGCTGCAATGGCTGCT...AGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAACTGCGGGAAGCACAGCCGCATTCCGACGTAGTGGGCTCCTGTCCCTTCGTTGACAACTGTACATaGATTCGTTTGCCAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LQLREAQPHSDVVGSCPFVDNCT*IRLPEN Trigger: ATTTTCTGGCAAACGAATGCATGTACAGTTGTCAAC...GAAGGGACAGGAGCCCACTACGTCGGAATGCGGCTGTGCTTCCCGCAGTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCATAATAGGAAGAGGAAGCGGCAGCAGCCATTGCAGCTGAGGTGGCAGCAGGTACATGCATTCGTTTaGCAGAAAATCAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FHNRKRKRQQPLQLRWQQVHAFV*QKISPE Trigger: TTCTGGGCTGATTTTCTGGCAAACGAATGCATGTAC...CTGCTGCCACCTCAGCTGCAATGGCTGCTGCCGCTTCCTCTTCCTATTATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTGGAACTTTGTATATCAGGCTAGCCTTACTCAGCTCTACCTACCTGCCTGTCCAAGTGCTAGGATTTaGGTGTGTGCCACCACCTAC | + |
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Preference number: 2 (lower is better) Translates to: SWNFVYQASLTQLYLPACPSARI*VCATTY Trigger: GTAGGTGGTGGCACACACCCAAATCCTAGCACTTGG...ACAGGCAGGTAGGTAGAGCTGAGTAAGGCTAGCCTGATATACAAAGTTCCACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTCCGAAGCCGGCTAGTTaGCAACTGTACATGCATTCG | + |
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Preference number: 2 (lower is better) Translates to: ARLRGASTVQEKGCQHNPPKPAS*QLYMHS Trigger: CGAATGCATGTACAGTTGTCAACTAGCCGGCTTCGG...AGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR TCA 90 bp | CACACTGTTGGGGCTTTAACTCAAGTGATGCTCGATTTCAGTGTACAAGGAAAAGTTGCTGCTGAAGCCTaGGACATCTCGCTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: HTVGALTQVMLDFSVQGKVAAEA*DISLSG Trigger: GCCAGAGAGCGAGATGTCTCAGGCTTCAGCAGCAAC...TTTTCCTTGTACACTGAAATCGAGCATCACTTGAGTTAAAGCCCCAACAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACGTTGCTGCTGAAGCCTaGGACATCTCGCTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KARLRGASTVQEKGCQHNVAAEA*DISLSG Trigger: GCCAGAGAGCGAGATGTCTCAGGCTTCAGCAGCAAC...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGGGTGAGACCCGAATTTaGATCCCCAACAGTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: QTQGQILVLICANRLQKLGETRI*IPNSCG Trigger: TCCACAACTGTTGGGGATCCAAATTCGGGTCTCACC...CAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGTGATGTCAGGCTCCTGGGACTaGAACCAACTCAGGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: TGPNLGLDLCQSTSKAVMSGSWD*NQLRVI Trigger: AATAACCCTGAGTTGGTTGCAGTCCCAGGAGCCTGA...CATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTCTAGATTCCCTTTTTCCTCTTTACTACCACCAGCCATCCTCGAAAGCACAGTACTCAAGTGAATaGAGACCAAAGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLDSLFPLYYHQPSSKAQYSSE*RPKAGR Trigger: CCTGCCTGCCTTTGGTCTTCATTCACTTGAGTACTG...TGCTTTCGAGGATGGCTGGTGGTAGTAAAGAGGAAAAAGGGAATCTAGAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGTAAACCTGTGGCAACAGAAGTGGAGTTaGGGTGACTGGGTACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: EETHWNHTNSSTGQVNLWQQKWS*GDWVQL Trigger: CAGCTGTACCCAGTCACCTCAACTCCACTTCTGTTG...CCACAGGTTTACTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR GCA 90 bp | CGACTTCAGAAGACCAGCTTCAATGCTAAGAGTCCAGCACTGACAGAAGAGTTAAGACATGGTCTGCTCTaGGTAATTGTATGCGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RLQKTSFNAKSPALTEELRHGLL*VIVCGS Trigger: GCTTCCGCATACAATTACGCAGAGCAGACCATGTCT...TAACTCTTCTGTCAGTGCTGGACTCTTAGCATTGAAGCTGGTCTTCTGAAGTCG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCTAGATTCCCTTTTTCCTCTTTACTACCACCAGCCATCCTCGAAAGCATGTGGAGAAGGAGCTTaGCGAATACAATGGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLDSLFPLYYHQPSSKACGEGA*RIQWGR Trigger: CCTTCCCCATTGTATTCGCCAAGCTCCTTCTCCACA...TGCTTTCGAGGATGGCTGGTGGTAGTAAAGAGGAAAAAGGGAATCTAGAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTGGAACTTTGTATATCAGGCTAGCCTTACTCAGCTCTACCTACCTGCCTGTAGTACTGATGCTCTCTaGGTCTTAGTTTTCCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SWNFVYQASLTQLYLPACSTDAL*VLVFLD Trigger: ATCCAGGAAAACTAAGACTCAGAGAGCATCAGTACT...ACAGGCAGGTAGGTAGAGCTGAGTAAGGCTAGCCTGATATACAAAGTTCCACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACAGACATGGTCTGCTCTaGGTAATTGTATGCGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: KARLRGASTVQEKGCQHNRHGLL*VIVCGS Trigger: GCTTCCGCATACAATTACGCAGAGCAGACCATGTCT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR GCA 90 bp | CGACTTCAGAAGACCAGCTTCAATGCTAAGAGTCCAGCACTGACAGAAGAGTTAGTACATGCATTCGTTTaGCAGAAAATCAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RLQKTSFNAKSPALTEELVHAFV*QKISPE Trigger: TTCTGGGCTGATTTTCTGGCAAACGAATGCATGTAC...TAACTCTTCTGTCAGTGCTGGACTCTTAGCATTGAAGCTGGTCTTCTGAAGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCCAATCGACTTCAAAAGCTGTGATGTTCTTGGATCAGTTCTGTTAGGGGTTATTCAGTCCATTTaGGGTTCACACCTCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SVPIDFKSCDVLGSVLLGVIQSI*GSHLQF Trigger: AAACTGGAGGTGTGAACCTCAAATGGACTGAATAAC...CCCTAACAGAACTGATCCAAGAACATCACAGCTTTTGAAGTCGATTGGCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTCTAGATTCCCTTTTTCCTCTTTACTACCACCAGCCATCCTCGAAAGCACTTACTTCCCCAGAGTaGATTATGCTAAGAGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLLDSLFPLYYHQPSSKALTSPE*IMLRVV Trigger: TACTACTCTTAGCATAATTCACTCTGGGGAAGTAAG...TGCTTTCGAGGATGGCTGGTGGTAGTAAAGAGGAAAAAGGGAATCTAGAAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR TCA 90 bp | CACACTGTTGGGGCTTTAACTCAAGTGATGCTCGATTTCAGTGTACAAGGAAAACATTTTCTCTGGTACTaGGAGAGACTAAGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: HTVGALTQVMLDFSVQGKHFLWY*ERLRYV Trigger: CACATACCTTAGTCTCTCTCAGTACCAGAGAAAATG...TTTTCCTTGTACACTGAAATCGAGCATCACTTGAGTTAAAGCCCCAACAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACATGATAATGCTCCATTaGTTTGTCACTAGAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: KARLRGASTVQEKGCQHNMIMLH*FVTRRT Trigger: TGTCCTTCTAGTGACAAAGCAATGGAGCATTATCAT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236160.2 ENSMUST00000236797.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATACTCTTGAAGCCCTGTaGTCTTGTGTTCTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLSMFMFQKKHIGITLTHTLEAL*SCVLPS Trigger: AGAGGGAAGAACACAAGACCACAGGGCTTCAAGAGT...ATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR CCA 90 bp | CACACTGTTGGGGCTTTAACTCAAGTGATGCTCGATTTCAGTGTACAAGGAAAAAACAGATGGATGCTTTaGGCTAAAATAAGGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: HTVGALTQVMLDFSVQGKNRWML*AKIRTS Trigger: TGAAGTCCTTATTTTAGCCCAAAGCATCCATCTGTT...TTTTCCTTGTACACTGAAATCGAGCATCACTTGAGTTAAAGCCCCAACAGTGTG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATGGCCAAGTAAACCTGTaGCATAAACTTATAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LLSMFMFQKKHIGITLTHGQVNL*HKLIEN Trigger: ATTTTCTATAAGTTTATGCCACAGGTTTACTTGGCC...ATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182200.2 ENSMUST00000182821.8 |
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| 3UTR-3UTR CAA 90 bp | GTATGCGGAAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTATGGCAGAAGCCACTCTaGAAGCCCTGTGGTCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: VCGSCSRRRHSFVRSDAVWQKPL*KPCGLV Trigger: CACAAGACCACAGGGCTTCAAGAGTGGCTTCTGCCA...TACCGCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTTCCGCATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR CCA 72 bp | CTCTACCTACCTGCCTGTGTCCCAAGTGCTAGGATTTaGGTGTGTGCCACCACCTACTGGCCAGAATTTAAG | + |
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Preference number: 3 (lower is better) Translates to: LYLPACVPSARI*VCATTYWPEFK Trigger: CTTAAATTCTGGCCAGTAGGTGGTGGCACACACCCAAATCCTAGCACTTGGGACACAGGCAGGTAGGTAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
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| 3UTR TCA 72 bp | TGCCTAGGCAACTTAAGACTTGTGACAGTACTCAAGTaGATGAAGACCAAAGGCAGGCAGGCAGGAGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CLGNLRLVTVLK*MKTKGRQAGAH Trigger: ATGGGCTCCTGCCTGCCTGCCTTTGGTCTTCATTCACTTGAGTACTGTCACAAGTCTTAAGTTGCCTAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR GCA 72 bp | CATTGCTTTGTCACTAGAAGGACACCCCTAAGGTCTTaGACATCCTTCCCAATTCAGCTGTCCGGATGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HCFVTRRTPLRS*TSFPIQLSGWL Trigger: TAACCATCCGGACAGCTGAATTGGGAAGGATGTGCAAGACCTTAGGGGTGTCCTTCTAGTGACAAAGCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236160.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGTTGGATCCCCAACAGTaGTGGAGTATTTCATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QTQGQILVLICANRLQKLLDPQQ*WSISSW Trigger: CCAGGATGAAATACTCCACAACTGTTGGGGATCCAA...CAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| 3UTR CCA 72 bp | TATTTCATCCTGGCAGCCTCATTAACATCAGGCTCCTaGGACTGCAACCAACTCAGGGTTATTCAGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: YFILAASLTSGS*DCNQLRVIQSI Trigger: AATGGACTGAATAACCCTGAGTTGGTTGCAGTCCCAGGAGCCTGATGTTAATGAGGCTGCCAGGATGAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTGGATCAGTTCTGTTAGGGTGAGACCCGAATTTGGATCCCCAACAGTTGGTTATTCAGTCCATTaGAGGTTCACACCTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CSWISSVRVRPEFGSPTVGYSVH*RFTPPV Trigger: AACTGGAGGTGTGAACCTCAAATGGACTGAATAACC...AACTGTTGGGGATCCAAATTCGGGTCTCACCCTAACAGAACTGATCCAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| 3UTR TCA 72 bp | AAAAGCTGTGATGTTCTTGGATCAGTTCTGTTAGGGTaGGACCCGAATTTGGATCCCCAACAGTTGTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSCDVLGSVLLG*DPNLDPQQLWS Trigger: ACTCCACAACTGTTGGGGATCCAAATTCGGGTCTCACCCTAACAGAACTGATCCAAGAACATCACAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| 3UTR TCA 72 bp | TTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGTaGTGTTCTTGGATCAGTTCTGTTAGGGTGAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LVLICANRLQKL*CSWISSVRVRP Trigger: GGGTCTCACCCTAACAGAACTGATCCAAGAACATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTGGTAACCACACTGTTGGGGCTTTAACTCAAGTGATGCTCGATTTCAGTGGATATCTCCAATTCTaGCCATTCCAGTACTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: VSGNHTVGALTQVMLDFSGYLQF*PFQYCT Trigger: TGTACAGTACTGGAATGGCAAGAATTGGAGATATCC...ACTGAAATCGAGCATCACTTGAGTTAAAGCCCCAACAGTGTGGTTACCACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGTAAACCTGTGGTTGATAAGGTCCTGTTaGGTGATTTGGCTCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EETHWNHTNSSTGQVNLWLIRSC*VIWLLS Trigger: ACTGAGGAGCCAAATCACCAAACAGGACCTTATCAA...CCACAGGTTTACTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182200.2 ENSMUST00000182821.8 |
||
| 3UTR GCA 72 bp | AATACAGACACAGGGCCAAATCTTGGTCTTGATCTGTaGCAATCGACTTCAAAAGCTGTGATGTTCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NTDTGPNLGLDL*QSTSKAVMFLD Trigger: ATCCAAGAACATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGTAAACCTGTGGTGTACATGCATTCGTTaGCCACAGATTCTCATACTG | + |
|
Preference number: 3 (lower is better) Translates to: EETHWNHTNSSTGQVNLWCTCIR*PQILIL Trigger: CAGTATGAGAATCTGTGGCAAACGAATGCATGTACA...CCACAGGTTTACTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR TCA 72 bp | TGGCGAATACAATGGGGAAGGCTTACTTCCCCAGAGTaGATTATGCTAAGAGTAGTAAACATAACCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: WRIQWGRLTSPE*IMLRVVNITCS Trigger: AGAACAGGTTATGTTTACTACTCTTAGCATAATTCACTCTGGGGAAGTAAGCCTTCCCCATTGTATTCGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR GCA 72 bp | ACTGTACATGCATTCGTTTGCCACAGATTCTCATACTaGGCTTCTTCTAGATTCCCTTTTTCCTCTTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: TVHAFVCHRFSY*ASSRFPFSSLL Trigger: TAGTAAAGAGGAAAAAGGGAATCTAGAAGAAGCGCAGTATGAGAATCTGTGGCAAACGAATGCATGTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR CCA 72 bp | TACTGGCCAGAATTTAAGAGTCAGCTGAGTGAATTTTaGCTCTATCATGAGATAATCATAGGCAAAGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: YWPEFKSQLSEF*LYHEIIIGKVL Trigger: CAGTACTTTGCCTATGATTATCTCATGATAGAGCCAAAATTCACTCAGCTGACTCTTAAATTCTGGCCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR TCA 72 bp | CCAGTACTGTACACATTTCTTGAAATAGGGAAACACTaGATTTCCTGTGTCACCATCTATAAGATTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVLYTFLEIGKH*ISCVTIYKILA Trigger: TGCCAAAATCTTATAGATGGTGACACAGGAAATTCAGTGTTTCCCTATTTCAAGAAATGTGTACAGTACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| 3UTR GCA 72 bp | AATTTTATCATAGGCTATGAAGAAATAGGGTGTAAGTaGCTATATCAAACAGATGGATGCTTTGGGCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NFIIGYEEIGCK*LYQTDGCFGLK Trigger: TTTTAGCCCAAAGCATCCATCTGTTTGATATAGGCACTTACACCCTATTTCTTCATAGCCTATGATAAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| CDS-3UTR TCA 90 bp | GTATGCGGAAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTAACTGCATTCACTGCTTaGAACTCTGTGTTGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCGSCSRRRHSFVRSDAVTAFTA*NSVLSR Trigger: CCTCGACAACACAGAGTTTCAAGCAGTGAATGCAGT...TACCGCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTTCCGCATAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236160.2 |
||
| 3UTR CAA 72 bp | CCCTTCCATAATAGGAAGAGGAAGCGGCAGCAGCCATaGCAGCTGAGGTGGCAGCAGAGCCAGAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFHNRKRKRQQP*QLRWQQSQSSA Trigger: TGCAGAACTCTGGCTCTGCTGCCACCTCAGCTGCAATGGCTGCTGCCGCTTCCTCTTCCTATTATGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182200.2 ENSMUST00000236160.2 ENSMUST00000236797.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAACTGCGGGAAGCACAGCCGCATTCCGACGTAGTGGGCTCCTGTCCCTTCAACTGCATTCACTGCTaGCTTGAAACTCTGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLREAQPHSDVVGSCPFNCIHC*LETLCC Trigger: ACAACACAGAGTTTCAAGGCAGCAGTGAATGCAGTT...GAAGGGACAGGAGCCCACTACGTCGGAATGCGGCTGTGCTTCCCGCAGTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTATGCGGAAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTTCCAATTCAAACTaGATTCACTGCTGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NCMRKLQPPPPQLRKIGRGSNSN*IHCCLE Trigger: TTCAAGGCAGCAGTGAATGCAGTTTGAATTGGAACC...GCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTTCCGCATACAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTTAGGGTGAGACCCGAATTTGGATCCCCAACAGTTGTGGAGTATTTCAGCAGCCATTGCAGCTaGGGTGGCAGCAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRVRPEFGSPTVVEYFSSHCS*GGSRAR Trigger: TCTGGCTCTGCTGCCACCTCAGCTGCAATGGCTGCT...GAAATACTCCACAACTGTTGGGGATCCAAATTCGGGTCTCACCCTAACAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTGTTGCTGCTGAAGCCTaGGACATCTCGCTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLRGASTVQEKGCQHNPVAAEA*DISLSG Trigger: GCCAGAGAGCGAGATGTCTCAGGCTTCAGCAGCAAC...AGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTTGGATCAGTTCTGTTAGGGTGAGACCCGAATTTGGATCCCCAACAGTTGTTGCTGCTGAAGCCTaGGACATCTCGCTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSWISSVRVRPEFGSPTVVAAEA*DISLSG Trigger: GCCAGAGAGCGAGATGTCTCAGGCTTCAGCAGCAAC...AACTGTTGGGGATCCAAATTCGGGTCTCACCCTAACAGAACTGATCCAAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACATTGTATGCGGAAGCTaGAGCCGCCGCCGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KARLRGASTVQEKGCQHNIVCGS*SRRRHS Trigger: GCTGTGGCGGCGGCGGCTGCAGCTTCCGCATACAAT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGTAAACCTGTGGATTGTATGCGGAAGCTaGAGCCGCCGCCGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EETHWNHTNSSTGQVNLWIVCGS*SRRRHS Trigger: GCTGTGGCGGCGGCGGCTGCAGCTTCCGCATACAAT...CCACAGGTTTACTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
||
| CDS-3UTR GCA 90 bp | AATACAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAATTGTATGCGGAAGCTaGAGCCGCCGCCGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTDTGPNLGLDLCQSTSKIVCGS*SRRRHS Trigger: GCTGTGGCGGCGGCGGCTGCAGCTTCCGCATACAAT...TTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR GCA 90 bp | CAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGATAGCCCTCTCCAACTaGGGGAAGCACAGCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QTQGQILVLICANRLQKLIALSN*GKHSRI Trigger: AATGCGGCTGTGCTTCCCGCAGTTGGAGAGGGCTAT...CAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACAGCAGCCATTGCAGCTaGGGTGGCAGCAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KARLRGASTVQEKGCQHNSSHCS*GGSRAR Trigger: TCTGGCTCTGCTGCCACCTCAGCTGCAATGGCTGCT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR TCA 90 bp | CAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGATTCCGAGTTGCTGCTaGAGCCTGAGACATCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTQGQILVLICANRLQKLIPSCC*SLRHLA Trigger: AGCGAGATGTCTCAGGCTTCAGCAGCAACTCGGAAT...CAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR GCA 90 bp | CGACTTCAGAAGACCAGCTTCAATGCTAAGAGTCCAGCACTGACAGAAGAGTTAATAGCCCTCTCCAACTaGGGGAAGCACAGCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RLQKTSFNAKSPALTEELIALSN*GKHSRI Trigger: AATGCGGCTGTGCTTCCCGCAGTTGGAGAGGGCTAT...TAACTCTTCTGTCAGTGCTGGACTCTTAGCATTGAAGCTGGTCTTCTGAAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTACTTAATACAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGCCGAAGCCGGCTAGTTaGCAACTGTACATGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLLNTDTGPNLGLDLCQSPKPAS*QLYMHS Trigger: CGAATGCATGTACAGTTGTCAACTAGCCGGCTTCGG...CGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTGTATTAAGTAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR TCA 90 bp | AGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTTACGAAGTGGAGTTGAGGTaGCTGGGTACAGCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLRGASTVQEKGCQHNPYEVELR*LGTAEL Trigger: GAGCTCAGCTGTACCCAGTCACCTCAACTCCACTTC...GTAAGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTCAACAGAAGTGGAGTTaGGGTGACTGGGTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLRGASTVQEKGCQHNPQQKWS*GDWVQL Trigger: CAGCTGTACCCAGTCACCTCAACTCCACTTCTGTTG...AGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGTGATGCAACAGAAGTGGAGTTaGGGTGACTGGGTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPNLGLDLCQSTSKAVMQQKWS*GDWVQL Trigger: CAGCTGTACCCAGTCACCTCAACTCCACTTCTGTTG...CATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTTACCTACCATTGCAGCTGAGGTaGCAGCAGAGCCAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGASTVQEKGCQHNPYLPLQLR*QQSQSS Trigger: AGAACTCTGGCTCTGCTGCCACCTCAGCTGCAATGG...TAGGTAAGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR CCA 90 bp | CTACTTAATACAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTCCATTGCAGCTGAGGTaGCAGCAGAGCCAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNTDTGPNLGLDLCQSTPLQLR*QQSQSS Trigger: AGAACTCTGGCTCTGCTGCCACCTCAGCTGCAATGG...AGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTGTATTAAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR TCA 90 bp | AGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTTACCCGAAGCCGGCTAGTTaGCAACTGTACATGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLRGASTVQEKGCQHNPYPKPAS*QLYMHS Trigger: CGAATGCATGTACAGTTGTCAACTAGCCGGCTTCGG...GTAAGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGAGCAGCCATTGCAGCTaGGGTGGCAGCAGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FMFQKKHIGITLTHQQAKSSHCS*GGSRAR Trigger: TCTGGCTCTGCTGCCACCTCAGCTGCAATGGCTGCT...CTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
||
| CDS-3UTR TCA 90 bp | CGACTTCAGAAGACCAGCTTCAATGCTAAGAGTCCAGCACTGACAGAAGAGTTACATTCACTGCTGCCTTaGAACTCTGTGTTGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQKTSFNAKSPALTEELHSLLP*NSVLSR Trigger: CCTCGACAACACAGAGTTTCAAGGCAGCAGTGAATG...TAACTCTTCTGTCAGTGCTGGACTCTTAGCATTGAAGCTGGTCTTCTGAAGTCG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
||
| CDS-3UTR GCA 90 bp | CAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGAGACATGGTCTGCTCTaGGTAATTGTATGCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTQGQILVLICANRLQKLRHGLL*VIVCGS Trigger: GCTTCCGCATACAATTACGCAGAGCAGACCATGTCT...CAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACATTCCGAGTTGCTGCTaGAGCCTGAGACATCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KARLRGASTVQEKGCQHNIPSCC*SLRHLA Trigger: AGCGAGATGTCTCAGGCTTCAGCAGCAACTCGGAAT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGATAGCCCTCTCCAACTaGGGGAAGCACAGCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FMFQKKHIGITLTHQQAKIALSN*GKHSRI Trigger: AATGCGGCTGTGCTTCCCGCAGTTGGAGAGGGCTAT...CTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
||
| 3UTR CAA 72 bp | TGTTCTTTGCATTTAAAAGAATGGCAGAAGCCACTCTaGAAGCCCTGTGGTCTTGTGTTCTTCCCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLHLKEWQKPL*KPCGLVFFPLP Trigger: AGGCAGAGGGAAGAACACAAGACCACAGGGCTTCAAGAGTGGCTTCTGCCATTCTTTTAAATGCAAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182200.2 |
||
| CDS-3UTR TCA 90 bp | TTTACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCAGTTGCTGCTGAAGCCTaGGACATCTCGCTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTEHVHVSEETHWNHTNSVAAEA*DISLSG Trigger: GCCAGAGAGCGAGATGTCTCAGGCTTCAGCAGCAAC...TGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCAACAGGCCAAGATTCCGAGTTGCTGCTaGAGCCTGAGACATCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FMFQKKHIGITLTHQQAKIPSCC*SLRHLA Trigger: AGCGAGATGTCTCAGGCTTCAGCAGCAACTCGGAAT...CTTGGCCTGTTGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
||
| CDS-3UTR GCA 90 bp | CAGACACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGGTACATGCATTCGTTTaGCTTGAAACTCTGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTQGQILVLICANRLQKLVHAFV*LETLCC Trigger: ACAACACAGAGTTTCAAGGCAAACGAATGCATGTAC...CAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
||
| CDS-3UTR TCA 90 bp | ACTAACTCATCAACAGGCCAAGTAAACCTGTGGCATAAACTTATAGAAAATACTGAAGTGGAGTTGAGGTaGCTGGGTACAGCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNSSTGQVNLWHKLIENTEVELR*LGTAEL Trigger: GAGCTCAGCTGTACCCAGTCACCTCAACTCCACTTC...AGTATTTTCTATAAGTTTATGCCACAGGTTTACTTGGCCTGTTGATGAGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCACAACAGAAGTGGAGTTaGGGTGACTGGGTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEHVHVSEETHWNHTNSSQQKWS*GDWVQL Trigger: CAGCTGTACCCAGTCACCTCAACTCCACTTCTGTTG...TGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR GCA 90 bp | GCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACCCTGTACATGCATTCGTTTaGCTTGAAACTCTGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ARLRGASTVQEKGCQHNPVHAFV*LETLCC Trigger: ACAACACAGAGTTTCAAGGCAAACGAATGCATGTAC...AGGGTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
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| CDS-3UTR CCA 90 bp | TTTACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCACCATTGCAGCTGAGGTaGCAGCAGAGCCAGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FTEHVHVSEETHWNHTNSPLQLR*QQSQSS Trigger: AGAACTCTGGCTCTGCTGCCACCTCAGCTGCAATGG...TGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR CCA 90 bp | CGACTTCAGAAGACCAGCTTCAATGCTAAGAGTCCAGCACTGACAGAAGAGTTAGGAACAGCTTCTTTGTaGTTCCAATTCAAACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RLQKTSFNAKSPALTEELGTASL*FQFKLH Trigger: ATGCAGTTTGAATTGGAACCACAAAGAAGCTGTTCC...TAACTCTTCTGTCAGTGCTGGACTCTTAGCATTGAAGCTGGTCTTCTGAAGTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
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| CDS-3UTR TCA 90 bp | TTTACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCACCGAAGCCGGCTAGTTaGCAACTGTACATGCATTCG | + |
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Preference number: 4 (lower is better) Translates to: FTEHVHVSEETHWNHTNSPKPAS*QLYMHS Trigger: CGAATGCATGTACAGTTGTCAACTAGCCGGCTTCGG...TGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR GCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACTCAAACTGCATTCACTaGTGCCTTGAAACTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KARLRGASTVQEKGCQHNSNCIH*CLETLC Trigger: ACACAGAGTTTCAAGGCAGCAGTGAATGCAGTTTGA...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
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| CDS-3UTR GCA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACATAAGGTGTGCGCACTaGTCCATATTGTTCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: KARLRGASTVQEKGCQHNIRCAH*SILFIV Trigger: TACAATGAACAATATGGAGCAGTGCGCACACCTTAT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCAAGACATGGTCTGCTCTaGGTAATTGTATGCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TEHVHVSEETHWNHTNSSRHGLL*VIVCGS Trigger: GCTTCCGCATACAATTACGCAGAGCAGACCATGTCT...TGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCAGTACATGCATTCGTTTaGCTTGAAACTCTGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TEHVHVSEETHWNHTNSSVHAFV*LETLCC Trigger: ACAACACAGAGTTTCAAGGCAAACGAATGCATGTAC...TGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR GCA 90 bp | TTACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATATAAGGTGTGCGCACTaGTCCATATTGTTCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: LLSMFMFQKKHIGITLTHIRCAH*SILFIV Trigger: TACAATGAACAATATGGAGCAGTGCGCACACCTTAT...ATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGCAGCCGCCGCCGCCACAGCTTCGTAAGATCGGACGCGGTAGCGCTTATGCATTCACTGCTGCCTaGAAACTCTGTGTTGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: KLQPPPPQLRKIGRGSAYAFTAA*KLCVVE Trigger: CTCGACAACACAGAGTTTCAAGGCAGCAGTGAATGC...ATAAGCGCTACCGCGTCCGATCTTACGAAGCTGTGGCGGCGGCGGCTGCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACAAGCGGCAGCAGCCATaGCAGCTGAGGTGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KARLRGASTVQEKGCQHNKRQQP*QLRWQQ Trigger: CTGCTGCCACCTCAGCTGCAATGGCTGCTGCCGCTT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGGTCTTGCACATCCTTCCCAATTCAGCTGTCCGGATGGTTACTTGGGAAAACTGCATTCACTGCTaGAAACTCTGTGTTGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: PKVLHILPNSAVRMVTWENCIHC*KLCVVE Trigger: CTCGACAACACAGAGTTTCAAGCAGTGAATGCAGTT...TTCCCAAGTAACCATCCGGACAGCTGAATTGGGAAGGATGTGCAAGACCTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236160.2 |
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| CDS-3UTR CAA 90 bp | ACTAACTCATCAACAGGCCAAGTAAACCTGTGGCATAAACTTATAGAAAATACTAAGCGGCAGCAGCCATaGCAGCTGAGGTGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TNSSTGQVNLWHKLIENTKRQQP*QLRWQQ Trigger: CTGCTGCCACCTCAGCTGCAATGGCTGCTGCCGCTT...AGTATTTTCTATAAGTTTATGCCACAGGTTTACTTGGCCTGTTGATGAGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGCCAAATCTTGGTCTTGATCTGTGCCAATCGACTTCAAAAGCTGTGATGATGCATTCGTTTGCCTaGAAACTCTGTGTTGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: TGPNLGLDLCQSTSKAVMMHSFA*KLCVVE Trigger: CTCGACAACACAGAGTTTCAAGGCAAACGAATGCAT...CATCACAGCTTTTGAAGTCGATTGGCACAGATCAAGACCAAGATTTGGCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235278.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAAGATTAAGAGGGGCTTCTACTGTACAGGAAAAGGGATGTCAGCATAACATGCATTCGTTTGCCTaGAAACTCTGTGTTGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: KARLRGASTVQEKGCQHNMHSFA*KLCVVE Trigger: CTCGACAACACAGAGTTTCAAGGCAAACGAATGCAT...GTTATGCTGACATCCCTTTTCCTGTACAGTAGAAGCCCCTCTTAATCTTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036744.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGCATGTTCATGTTTCAGAAGAAACACATTGGAATCACACTAACTCATCAATGCATTCGTTTGCCTaGAAACTCTGTGTTGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: TEHVHVSEETHWNHTNSSMHSFA*KLCVVE Trigger: CTCGACAACACAGAGTTTCAAGGCAAACGAATGCAT...TGATGAGTTAGTGTGATTCCAATGTGTTTCTTCTGAAACATGAACATGCTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182821.8 |
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| CDS GCA 72 bp | ACTTGGGAACAGCTTCTTTGTGGTTCCAATTCAAACTaGATTCACTGCTGCCTTGAAACTCTGTGTTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: TWEQLLCGSNSN*IHCCLETLCCR Trigger: TCGACAACACAGAGTTTCAAGGCAGCAGTGAATGCAGTTTGAATTGGAACCACAAAGAAGCTGTTCCCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236797.2 |
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