Pregenerated sensors for RBM48 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040302Ensembl transcript IDs: ENSMUST00000042753.14, ENSMUST00000121877.3, ENSMUST00000176000.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCTGATACTCTGTCCACATGTTCCCCACGTGAACATGTGCTCTTaGAAGCAAAACAGCTTAAAGGGAATTCACAAGAATAAGGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: SLILCPHVPHVNMCS*KQNSLKGIHKNKED Trigger: GTCTTCCTTATTCTTGTGAATTCCCTTTAAGCTGTTTTGCTTCCAAGAGCACATGTTCACGTGGGGAACATGTGGACAGAGTATCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR CCA 90 bp | AGGTGGATGGAAACCTTGTCTAGAATCTTTTGTTCCTTTCTGCTCTaGAACTGGTTTCTTCTTCGCCATGTAACAATCTTGGTTTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: RWMETLSRIFCSFLL*NWFLLRHVTILVFS Trigger: ACTAAAAACCAAGATTGTTACATGGCGAAGAAGAAACCAGTTCCAGAGCAGAAAGGAACAAAAGATTCTAGACAAGGTTTCCATCCACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR TCA 90 bp | CCCTGCCAGTCTCTGAACACAGATTGCTCAATACCTGAATTAAAATaGGACCCTGATTGCCTTATTTGTATGACATATTTCTACATTTGT | + |
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Preference number: 1 (lower is better) Translates to: PCQSLNTDCSIPELK*DPDCLICMTYFYIC Trigger: ACAAATGTAGAAATATGTCATACAAATAAGGCAATCAGGGTCTCATTTTAATTCAGGTATTGAGCAATCTGTGTTCAGAGACTGGCAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| 3UTR-3UTR CCA 90 bp | GGCATGAACCTGCCAACTGCCTGTGAGGTAGCAATGGCCTCTTGCACACTAGAGTGTTCCTTTCTGCTCTaGAACTGGTTTCTTCTTCGC | + |
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Preference number: 2 (lower is better) Translates to: GMNLPTACEVAMASCTLECSFLL*NWFLLR Trigger: GCGAAGAAGAAACCAGTTCCAGAGCAGAAAGGAACA...CTCTAGTGTGCAAGAGGCCATTGCTACCTCACAGGCAGTTGGCAGGTTCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCGTTACTGCTTGTGTGTGTCTCAAGCAGAGTTCCCAGTTCTCGATCACAGTCCCCACGTGAACATGTaGTCTTGGAAGCAAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: PRYCLCVSQAEFPVLDHSPHVNM*SWKQNS Trigger: GCTGTTTTGCTTCCAAGAGCACATGTTCACGTGGGG...ACTGTGATCGAGAACTGGGAACTCTGCTTGAGACACACACAAGCAGTAACGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGATGAAATCACCTCTTTAAGTTTCCTCCGAATTAAGGTTGCCGTTGTATCAAAACCTCGTTACTaGTTGTGTGTGTCTCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GTDEITSLSFLRIKVAVVSKPRY*LCVSQA Trigger: TGCTTGAGACACACACAAGCAGTAACGAGGTTTTGA...TACAACGGCAACCTTAATTCGGAGGAAACTTAAAGAGGTGATTTCATCTGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGATGAAATCACCTCTTTAAGTTTCCTCCGAATTAAGGTTGCCGTTGTATCTTTTGTTCCTTTCTaGTCTGGAACTGGTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTDEITSLSFLRIKVAVVSFVPF*SGTGFF Trigger: GAAGAAACCAGTTCCAGAGCAGAAAGGAACAAAAGA...TACAACGGCAACCTTAATTCGGAGGAAACTTAAAGAGGTGATTTCATCTGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR GCA 72 bp | AGTTCTCGATCACAGTCTCGCCGCCGTTTCCTCTCCTaGAGCTGTGTTGTCCTAGGCATGAACCTGCCAACT | + |
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Preference number: 3 (lower is better) Translates to: SSRSQSRRRFLS*SCVVLGMNLPT Trigger: AGTTGGCAGGTTCATGCCTAGGACAACACAGCTGCAGGAGAGGAAACGGCGGCGAGACTGTGATCGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR TCA 72 bp | GGAGCTAGAGTTAGACACTTGGCCTGGTTGATGGGATaGCTCAGGTCCTGTAGAGAAGTAGTATATGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GARVRHLAWLMG*LRSCREVVYAL Trigger: AAGAGCATATACTACTTCTCTACAGGACCTGAGTCATCCCATCAACCAGGCCAAGTGTCTAACTCTAGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121877.3 |
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| 3UTR CCA 72 bp | CTCTGTCCACATGTTCCCCACGTGAACATGTGCTCTTaGAAGCAAAACAGCTTAAAGGGAATTCACAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: LCPHVPHVNMCS*KQNSLKGIHKN Trigger: ATTCTTGTGAATTCCCTTTAAGCTGTTTTGCTTCCAAGAGCACATGTTCACGTGGGGAACATGTGGACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR CCA 72 bp | GAAACCTTGTCTAGAATCTTTTGTTCCTTTCTGCTCTaGAACTGGTTTCTTCTTCGCCATGTAACAATCTTG | + |
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Preference number: 3 (lower is better) Translates to: ETLSRIFCSFLL*NWFLLRHVTIL Trigger: CAAGATTGTTACATGGCGAAGAAGAAACCAGTTCCAGAGCAGAAAGGAACAAAAGATTCTAGACAAGGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| 3UTR TCA 72 bp | AATATAAATAGCCTGAAAAATTATACTGTGGCCCGCTaGCAGAAGAAAAAGTACAGATATGCTGACAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: NINSLKNYTVAR*QKKKYRYADSV Trigger: TACACTGTCAGCATATCTGTACTTTTTCTTCTGTCAGCGGGCCACAGTATAATTTTTCAGGCTATTTATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| 3UTR TCA 72 bp | TCTCTGAACACAGATTGCTCAATACCTGAATTAAAATaGGACCCTGATTGCCTTATTTGTATGACATATTTC | + |
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Preference number: 3 (lower is better) Translates to: SLNTDCSIPELK*DPDCLICMTYF Trigger: GAAATATGTCATACAAATAAGGCAATCAGGGTCTCATTTTAATTCAGGTATTGAGCAATCTGTGTTCAGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR GCA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTCGCCGTTTCCTCTCCTaGAGCTGTGTTGTCCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: VSATLRVDPRKMETFATGRRFLS*SCVVLG Trigger: GCCTAGGACAACACAGCTGCAGGAGAGGAAACGGCG...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR TCA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTCACATGTTCCCCACGTaGACATGTGCTCTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VSATLRVDPRKMETFATGHMFPT*TCALGS Trigger: GCTTCCAAGAGCACATGTTCACGTGGGGAACATGTG...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR GCA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTTTTCCCGTCACTGGATaGCATCTTGCCGGCTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: LCHIACRSKKDGNICNWFFPVTG*HLAGSS Trigger: ACTAGAGCCGGCAAGATGGCATCCAGTGACGGGAAA...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR GCA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTCCCCACGTGAACATGTaGTCTTGGAAGCAAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: VSATLRVDPRKMETFATGPHVNM*SWKQNS Trigger: GCTGTTTTGCTTCCAAGAGCACATGTTCACGTGGGG...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CCA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTCAACTAATTCCTTCATaGCTCCCACTGCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: LCHIACRSKKDGNICNWFQLIPS*LPLQEL Trigger: GAGTTCCTGCAGTGGGAGCCATGAAGGAATTAGTTG...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CCA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTGTTCCTTTCTGCTCTaGAACTGGTTTCTTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: VSATLRVDPRKMETFATGCSFLL*NWFLLR Trigger: GCGAAGAAGAAACCAGTTCCAGAGCAGAAAGGAACA...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| 3UTR CAA 72 bp | ACTCTGTCCACATGTTCCCCACGTGAACATGTGCTCTaGGAAGCAAAACAGCTTAAAGGGAATTCACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TLSTCSPREHVL*EAKQLKGNSQE Trigger: TTCTTGTGAATTCCCTTTAAGCTGTTTTGCTTCCAAGAGCACATGTTCACGTGGGGAACATGTGGACAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTCCAGGCATAGGTGGATaGAAACCTTGTCTAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: LCHIACRSKKDGNICNWFPGIGG*KPCLES Trigger: AGATTCTAGACAAGGTTTCCATCCACCTATGCCTGG...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CCA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTCTTCTTTGTTTTCCTaGGTGACTTGTACACACGTC | + |
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Preference number: 4 (lower is better) Translates to: VSATLRVDPRKMETFATGSSLFS*VTCTHV Trigger: GACGTGTGTACAAGTCACCCAGGAAAACAAAGAAGA...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR GCA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTTCAAAACCTCGTTACTaGTTGTGTGTGTCTCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCHIACRSKKDGNICNWFSKPRY*LCVSQA Trigger: TGCTTGAGACACACACAAGCAGTAACGAGGTTTTGA...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR TCA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTAGGCTTTGGCACAGATaGAATCACCTCTTTAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LCHIACRSKKDGNICNWFRLWHR*NHLFKF Trigger: AAACTTAAAGAGGTGATTTCATCTGTGCCAAAGCCT...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR GCA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTTCTTTTGTTCCTTTCTaGTCTGGAACTGGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LCHIACRSKKDGNICNWFSFVPF*SGTGFF Trigger: GAAGAAACCAGTTCCAGAGCAGAAAGGAACAAAAGA...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS GCA 90 bp | CTGGACGTGGTGATCGAATACGCCACCAGGTTTCCCGTCACTGGATaGCATCTTGCCGGCTCTAGTCCCCCGCGCCAGAACAACATCCGC | + |
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Preference number: 5 (lower is better) Translates to: LDVVIEYATRFPVTG*HLAGSSPPRQNNIR Trigger: GCGGATGTTGTTCTGGCGCGGGGGACTAGAGCCGGCAAGATGGCATCCAGTGACGGGAAACCTGGTGGCGTATTCGATCACCACGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042753.14 ENSMUST00000121877.3 |
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| CDS TCA 90 bp | TCCCGGTATTTGGCCCGCGAGTCACACACAGCCGTCTGGACGTGGTaGTCGAATACGCCACCAGGTTTCCCGTCACTGGATGCCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: SRYLARESHTAVWTW*SNTPPGFPSLDAIL Trigger: CAAGATGGCATCCAGTGACGGGAAACCTGGTGGCGTATTCGATCACCACGTCCAGACGGCTGTGTGTGACTCGCGGGCCAAATACCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042753.14 ENSMUST00000121877.3 |
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| CDS-3UTR CAA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTTTGATTGTATATACCTaGACCGCGCGAGGGCGTCGG | + |
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Preference number: 5 (lower is better) Translates to: LCHIACRSKKDGNICNWFLIVYT*TARGRR Trigger: CCGACGCCCTCGCGCGGTCAAGGTATATACAATCAA...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CAA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTGTCCTCTGGAGGCTTaGGCACAGATGAAATCACCT | + |
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Preference number: 5 (lower is better) Translates to: VSATLRVDPRKMETFATGCPLEA*AQMKSP Trigger: AGGTGATTTCATCTGTGCCAAAGCCTCCAGAGGACA...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CAA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTGTTCATCTGCAGCTTaGGTGAAAAGGCACTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: VSATLRVDPRKMETFATGCSSAA*VKRHCG Trigger: ACCACAGTGCCTTTTCACCAAAGCTGCAGATGAACA...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CAA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTAAACCTCGTTACTGCTaGTGTGTGTCTCAAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VSATLRVDPRKMETFATGKPRYC*CVSQAE Trigger: CTCTGCTTGAGACACACACAAGCAGTAACGAGGTTT...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS-3UTR CAA 90 bp | GTCTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTCACACGTCTTTTATATaGTCCTCTGGAGGCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: VSATLRVDPRKMETFATGHTSFI*SSGGFG Trigger: GCCAAAGCCTCCAGAGGACAATATAAAAGACGTGTG...ACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS CCA 90 bp | GTTCAATCGCACCATACAGAGCAAAACGCTCAACTAATTCCTTCATaGCTCCCACTGCAGGAACTCCTTGTATTAGTAAGTACTGAGACT | + |
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Preference number: 5 (lower is better) Translates to: VQSHHTEQNAQLIPS*LPLQELLVLVSTET Trigger: AGTCTCAGTACTTACTAATACAAGGAGTTCCTGCAGTGGGAGCCATGAAGGAATTAGTTGAGCGTTTTGCTCTGTATGGTGCGATTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042753.14 ENSMUST00000121877.3 |
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| CDS-3UTR CAA 90 bp | CTCTGCCACATTGCGTGTAGATCCAAGAAAGATGGAAACATTTGCAACTGGTTTCGTGAACATGTGCTCTaGGAAGCAAAACAGCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LCHIACRSKKDGNICNWFREHVL*EAKQLK Trigger: TTTAAGCTGTTTTGCTTCCAAGAGCACATGTTCACG...AAACCAGTTGCAAATGTTTCCATCTTTCTTGGATCTACACGCAATGTGGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042753.14 |
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| CDS CAA 72 bp | CCCTTGACCGCGCGAGGGCGTCGGCCCTCCCGGTATTaGGCCCGCGAGTCACACACAGCCGTCTGGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: PLTARGRRPSRY*ARESHTAVWTW Trigger: CCACGTCCAGACGGCTGTGTGTGACTCGCGGGCCAAATACCGGGAGGGCCGACGCCCTCGCGCGGTCAAGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176000.2 |
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| CDS CAA 72 bp | ACCTTGACCGCGCGAGGGCGTCGGCCCTCCCGGTATTaGGCCCGCGAGTCACACACAGCCGTCTGGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: TLTARGRRPSRY*ARESHTAVWTW Trigger: CCACGTCCAGACGGCTGTGTGTGACTCGCGGGCCAAATACCGGGAGGGCCGACGCCCTCGCGCGGTCAAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042753.14 ENSMUST00000121877.3 |
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| CDS TCA 72 bp | TTGGCCCGCGAGTCACACACAGCCGTCTGGACGTGGTaGTCGAATACGCCACCAGGTTTCCCGTCACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LARESHTAVWTW*SNTPPGFPSLD Trigger: ATCCAGTGACGGGAAACCTGGTGGCGTATTCGATCACCACGTCCAGACGGCTGTGTGTGACTCGCGGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042753.14 ENSMUST00000121877.3 |
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| CDS CCA 72 bp | CACCATACAGAGCAAAACGCTCAACTAATTCCTTCATaGCTCCCACTGCAGGAACTCCTTGTATTAGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: HHTEQNAQLIPS*LPLQELLVLVS Trigger: ACTTACTAATACAAGGAGTTCCTGCAGTGGGAGCCATGAAGGAATTAGTTGAGCGTTTTGCTCTGTATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042753.14 ENSMUST00000121877.3 |
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