RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM47 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070780

Ensembl transcript IDs: ENSMUST00000094756.11, ENSMUST00000094757.9, ENSMUST00000113724.6, ENSMUST00000113726.8, ENSMUST00000167950.8, ENSMUST00000200775.4, ENSMUST00000200852.4, ENSMUST00000201544.4

Found 499 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATaGAGAGCAACGGCGGGAAGCCCTGCTAAACAAACACAGGGCTTC +
Preference number: 1 (lower is better)
Translates to: WMCMPVFTCPCSPTK*RATAGSPAKQTQGF
Trigger: GAAGCCCTGTGTTTGTTTAGCAGGGCTTCCCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 90 bp AACTCCTACAGAGACTTCTCCTGGATGTGTATGCCCGTGTTCACCTaGCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGAAGCCCT +
Preference number: 1 (lower is better)
Translates to: NSYRDFSWMCMPVFT*PCSPTKCRATAGSP
Trigger: AGGGCTTCCCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACATCCAGGAGAAGTCTCTGTAGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR TCA 90 bp CAAAACTCTGATGGGAAGGGAGATTGGATGGACTCTGTCATGCCATaGAACACAACTGTGCATCTGCTACCCTTATTGCACACCTCACAT +
Preference number: 1 (lower is better)
Translates to: QNSDGKGDWMDSVMP*NTTVHLLPLLHTSH
Trigger: ATGTGAGGTGTGCAATAAGGGTAGCAGATGCACAGTTGTGTTTCATGGCATGACAGAGTCCATCCAATCTCCCTTCCCATCAGAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR CCA 90 bp GAAGTTATTTACAATCTACCCTTAAACTCCTACAGAGACTTCTCCTaGATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAA +
Preference number: 1 (lower is better)
Translates to: EVIYNLPLNSYRDFS*MCMPVFTCPCSPTK
Trigger: TTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACATCCAGGAGAAGTCTCTGTAGGAGTTTAAGGGTAGATTGTAAATAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR TCA 90 bp AACATTGAAATAAAATGGCTGCATTTCGCATTACACTACAGGCCATaGACTTGGCAACTTTGGCGAGCAAGCGTCAGAAGTTATTTACAA +
Preference number: 1 (lower is better)
Translates to: NIEIKWLHFALHYRP*TWQLWRASVRSYLQ
Trigger: TTGTAAATAACTTCTGACGCTTGCTCGCCAAAGTTGCCAAGTTCATGGCCTGTAGTGTAATGCGAAATGCAGCCATTTTATTTCAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR TCA 90 bp AAAGACAATTGGGACTCTCTTAATTTAAAAGCAGAAAGCGTTTGCTaGGGGCAAGATCCTACTATTAGTCCACAAATAAGAGTTAAGCCT +
Preference number: 1 (lower is better)
Translates to: KDNWDSLNLKAESVC*GQDPTISPQIRVKP
Trigger: AGGCTTAACTCTTATTTGTGGACTAATAGTAGGATCTTGCCCTCAGCAAACGCTTTCTGCTTTTAAATTAAGAGAGTCCCAATTGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTaGACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAA +
Preference number: 1 (lower is better)
Translates to: ISVCYLITFFFTCRF*TCTNPTRSFFINNK
Trigger: TTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR-3UTR TCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGTTGGGACTCTGGATGTaGGGAGTCTTTTCCATGTTG +
Preference number: 2 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRLGLWM*GVFSML
Trigger: CAACATGGAAAAGACTCCTCACATCCAGAGTCCCAA...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCAGAGCTTTCCAGTGTTaGGACTCTGGATGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCRAFQC*DSGCEE
Trigger: CTCCTCACATCCAGAGTCCCAACACTGGAAAGCTCT...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCGATGGGAAGGGAGATTaGATGGACTCTGTCATGCCA +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCDGKGD*MDSVMP
Trigger: TGGCATGACAGAGTCCATCCAATCTCCCTTCCCATC...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR TCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCGACTCTGTCATGCCATaGAACACAACTGTGCATCTG +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCDSVMP*NTTVHL
Trigger: CAGATGCACAGTTGTGTTTCATGGCATGACAGAGTC...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR GCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGTTCACCTGCAGGTTTTaGACGTGTACCAACCCGACA +
Preference number: 2 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATFTCRF*TCTNPT
Trigger: TGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGAGAGCTTTCCAGTGTTaGGACTCTGGATGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATRAFQC*DSGCEE
Trigger: CTCCTCACATCCAGAGTCCCAACACTGGAAAGCTCT...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCTACAGAGACTTCTCCTaGATGTGTATGCCCGTGTTC +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCYRDFS*MCMPVF
Trigger: GAACACGGGCATACACATCCAGGAGAAGTCTCTGTA...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCGGAAGGGAGATTGGATaGACTCTGTCATGCCATGAA +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCGREIG*TLSCHE
Trigger: TTCATGGCATGACAGAGTCCATCCAATCTCCCTTCC...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR TCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCCCTCACATCCTGGACTaGGCCTTCTTAAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCPHILD*AFLKRC
Trigger: ACATCTTTTTAAGAAGGCTCAGTCCAGGATGTGAGG...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR GCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACTTCACCTGCAGGTTTTaGACGTGTACCAACCCGACA +
Preference number: 2 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNFTCRF*TCTNPT
Trigger: TGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR GCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCCATGAAACACAACTGTaGATCTGCTACCCTTATTGC +
Preference number: 2 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCHETQL*ICYPYC
Trigger: GCAATAAGGGTAGCAGATGCACAGTTGTGTTTCATG...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGCATGACAAGAATAAATaGCATTATCGTCAACCCTTA +
Preference number: 2 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRHDKNK*HYRQPL
Trigger: TAAGGGTTGACGATAATGCCATTTATTCTTGTCATG...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR GCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGATTCACCTGCAGGTTTTaGACGTGTACCAACCCGACA +
Preference number: 2 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRFTCRF*TCTNPT
Trigger: TGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR TCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTTGGGACTCTGGATGTaGGGAGTCTTTTCCATGTTG +
Preference number: 2 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPLGLWM*GVFSML
Trigger: CAACATGGAAAAGACTCCTCACATCCAGAGTCCCAA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp TTAAGGAGGTCACTCATTCCAACAGGCCCGTGTGGCTaGAGCTTCCCGAGTGACGCCTCTCACTCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: LRRSLIPTGPCG*SFPSDASHSPS
Trigger: GCTGGGAGAGTGAGAGGCGTCACTCGGGAAGCTGCAGCCACACGGGCCTGTTGGAATGAGTGACCTCCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp ATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATaGAGAGCAACGGCGGGAAGCCCTGCTAAACAAACA +
Preference number: 3 (lower is better)
Translates to: MPVFTCPCSPTK*RATAGSPAKQT
Trigger: TGTTTGTTTAGCAGGGCTTCCCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp AGAGACTTCTCCTGGATGTGTATGCCCGTGTTCACCTaGCCGTGTTCACCTACCAAATGCAGAGCAACGGCG +
Preference number: 3 (lower is better)
Translates to: RDFSWMCMPVFT*PCSPTKCRATA
Trigger: CGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACATCCAGGAGAAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp TGCAGCTTCCCGAGTGACGCCTCTCACTCTCCCAGCTaGTCTATACCACGCAATAAGGAAGGAGGGATGCTT +
Preference number: 3 (lower is better)
Translates to: CSFPSDASHSPS*SIPRNKEGGML
Trigger: AAGCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGTCACTCGGGAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR TCA 72 bp GATGGGAAGGGAGATTGGATGGACTCTGTCATGCCATaGAACACAACTGTGCATCTGCTACCCTTATTGCAC +
Preference number: 3 (lower is better)
Translates to: DGKGDWMDSVMP*NTTVHLLPLLH
Trigger: GTGCAATAAGGGTAGCAGATGCACAGTTGTGTTTCATGGCATGACAGAGTCCATCCAATCTCCCTTCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR CCA 72 bp TACAATCTACCCTTAAACTCCTACAGAGACTTCTCCTaGATGTGTATGCCCGTGTTCACCTGCCCGTGTTCA +
Preference number: 3 (lower is better)
Translates to: YNLPLNSYRDFS*MCMPVFTCPCS
Trigger: TGAACACGGGCAGGTGAACACGGGCATACACATCCAGGAGAAGTCTCTGTAGGAGTTTAAGGGTAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp ATTGGATGGACTCTGTCATGCCATGAAACACAACTGTaGATCTGCTACCCTTATTGCACACCTCACATCCTG +
Preference number: 3 (lower is better)
Translates to: IGWTLSCHETQL*ICYPYCTPHIL
Trigger: CAGGATGTGAGGTGTGCAATAAGGGTAGCAGATGCACAGTTGTGTTTCATGGCATGACAGAGTCCATCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR-3UTR CAA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGACGCGGGCCTGCTAAGTaGAAAAGTCATTTTCAAAAA +
Preference number: 3 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRRGPAK*KSHFQK
Trigger: TTTTTGAAAATGACTTTTCAACTTAGCAGGCCCGCG...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTaGAGGTTTTGCACGTGTACCAACCCGACACGTTCT +
Preference number: 3 (lower is better)
Translates to: ISVCYLITFFFT*RFCTCTNPTRS
Trigger: AGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR TCA 72 bp AAGAGCATACAAACTTTAAGAGATGGCATTAAGGCGTaGGGCGTCGCAAGTCTTTTAGAAATGTATGAACGC +
Preference number: 3 (lower is better)
Translates to: KSIQTLRDGIKA*GVASLLEMYER
Trigger: GCGTTCATACATTTCTAAAAGACTTGCGACGCCTCACGCCTTAATGCCATCTCTTAAAGTTTGTATGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR TCA 72 bp GGAGAAAGAAAGGCAGCGAGAAGCTTAACTTCCCACTaGCAAGTCTTGTCTATAATCACATACATTCTTGGT +
Preference number: 3 (lower is better)
Translates to: GERKAARSLTSH*QVLSIITYILG
Trigger: ACCAAGAATGTATGTGATTATAGACAAGACTTGTCAGTGGGAAGTTAAGCTTCTCGCTGCCTTTCTTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR GCA 72 bp TGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTaGACGTGTACCAACCCGACACGTTCTTTCTTCATA +
Preference number: 3 (lower is better)
Translates to: CYLITFFFTCRF*TCTNPTRSFFI
Trigger: TATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCGCGGGCCTGCTAAGTaGAAAAGTCATTTTCAAAAA +
Preference number: 3 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRGPAK*KSHFQK
Trigger: TTTTTGAAAATGACTTTTCAACTTAGCAGGCCCGCG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR TCA 72 bp TGGGACTCTCTTAATTTAAAAGCAGAAAGCGTTTGCTaGGGGCAAGATCCTACTATTAGTCCACAAATAAGA +
Preference number: 3 (lower is better)
Translates to: WDSLNLKAESVC*GQDPTISPQIR
Trigger: TCTTATTTGTGGACTAATAGTAGGATCTTGCCCTCAGCAAACGCTTTCTGCTTTTAAATTAAGAGAGTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
3UTR CCA 72 bp AAACCCCATAAACCCAGAAAACATGACAAGAATAAATaGCATTATCGTCAACCCTTAATGCCAGTGGAAATA +
Preference number: 3 (lower is better)
Translates to: KPHKPRKHDKNK*HYRQPLMPVEI
Trigger: TATTTCCACTGGCATTAAGGGTTGACGATAATGCCATTTATTCTTGTCATGTTTTCTGGGTTTATGGGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGACCTCACAGCCACGCTaGGGATGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCATCCCCAGCGTGGCTGTGAGGT...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPPGWAR*ERCRGS
Trigger: GCTACCCCTACAACGCTCTCATCGGGCCCAACCGGG...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRPGWAR*ERCRGS
Trigger: GCTACCCCTACAACGCTCTCATCGGGCCCAACCGGG...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRGTPGP*GPVSSC
Trigger: GCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCACCTCACAGCCACGCTaGGGATGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCATCCCCAGCGTGGCTGTGAGGT...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGCTTGCGGCGTGCCATaGCTGCAGCACGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPACGVP*LQHDGS
Trigger: AGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGAGCCACCACCACCCTTaGCTGCCTTCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPSHHHP*LPSGSG
Trigger: CCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCT...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGGTAGACGTCGTGGATaGGCACCTGGAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRGRRRG*APGEQR
Trigger: CCGCTGCTCTCCAGGTGCCCATCCACGACGTCTACC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCCAAAGGGGACGTAGCTaGCCCCGTAGATGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCQRGRS*PRRCRR
Trigger: CCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGTGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRWRLWQ*REQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCA...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGCGGTGGGGATTCTCTaGACATTTGGTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPAVGIL*TFGATV
Trigger: CACCGTGGCACCAAATGTTCAGAGAATCCCCACCGC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRGVHRT*AARSLV
Trigger: TACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRTTTLG*LLVAGV
Trigger: TACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGT...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCTGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCWWPHS*IRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATGTPGP*GPVSSC
Trigger: GCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCC...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGAGTACTGAGCACCGATaGCAGGGATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRSTEHR*QGWPLC
Trigger: GCACAGTGGCCATCCCTGCCATCGGTGCTCAGTACT...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCGGTAGACGTCGTGGATaGGCACCTGGAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCGRRRG*APGEQR
Trigger: CCGCTGCTCTCCAGGTGCCCATCCACGACGTCTACC...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGGCCAAAGCTCTTCTTaGTGGTCTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPGQSSS*WSPRWS
Trigger: AGACCACCGAGGAGACCATCAAGAAGAGCTTTGGCC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGAGTCACGGATCTTCTTaGCCCTTTCCACGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPSHGSS*PFPRSL
Trigger: CAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACT...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGAGCTGGCCCCGTAGATaGCGGCGGTGGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATSWPRR*RRWGFS
Trigger: AGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCT...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGCAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPQSTAI*WPHSWI
Trigger: GATCCAACTGTGGGGCCACCAGATTGCTGTGGACTG...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGCCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPPFHAA*VELAKA
Trigger: AGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGG...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGCGAGGTAGGAACCCCTaGGCCCTGGGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATRGRNP*ALGSCF
Trigger: GAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCG...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRRSSVV*RLWQWR
Trigger: CCGCCACTGCCACAATCGCCACACTACAGAAGAACG...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGCACCGCAATGGGGCTaGTCATGTGTTCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRAPQWG*SCVPLC
Trigger: ACACAATGGAACACATGATCAGCCCCATTGCGGTGC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCTTTLG*LLVAGV
Trigger: TACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGT...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGCGCTGTTCATGGCTGTaGCGGAATCTTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPRCSWL*RNLQQS
Trigger: TGACTGCTGAAGATTCCGCCACAGCCATGAACAGCG...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACATGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTWWPHS*IRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACACGAGGTAGGAACCCCTaGGCCCTGGGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTRGRNP*ALGSCF
Trigger: GAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCG...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGA +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPDYFRG*GCLEHG
Trigger: TCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGA +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRDYFRG*GCLEHG
Trigger: TCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGCCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGTATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATYQCQQ*SLIGRA
Trigger: GGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATA...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGCGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGTTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCCAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCQSTAI*WPHSWI
Trigger: GATCCAACTGTGGGGCCACCAGATTGCTGTGGACTG...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACATGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTWRLWQ*REQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCA...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGGCCAAAGCTCTTCTTaGTGGTCTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATGQSSS*WSPRWS
Trigger: AGACCACCGAGGAGACCATCAAGAAGAGCTTTGGCC...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACCCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGAGTCACGGATCTTCTTaGCCCTTTCCACGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATSHGSS*PFPRSL
Trigger: CAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACT...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGCGGTGGGGATTCTCTaGACATTTGGTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNAVGIL*TFGATV
Trigger: CACCGTGGCACCAAATGTTCAGAGAATCCCCACCGC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAGCGGTGGGGATTCTCTaGACATTTGGTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTAVGIL*TFGATV
Trigger: CACCGTGGCACCAAATGTTCAGAGAATCCCCACCGC...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACATATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTYQCQQ*SLIGRA
Trigger: GGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATA...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNGVHRT*AARSLV
Trigger: TACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACACGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGAGGTTGTTCATAGCATaGACAGCATCCTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPRLFIA*TASSRL
Trigger: TAGCCGTGAGGATGCTGTGCATGCTATGAACAACCT...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTTTTLG*LLVAGV
Trigger: TACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGT...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACTTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKGTPGP*GPVSSC
Trigger: GCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGA +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCDYFRG*GCLEHG
Trigger: TCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATC...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGATTCTCTGAACATTTaGTGCCACGGTGTACACAGG +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPDSLNI*CHGVHR
Trigger: CCTGTGTACACCGTGGCACCAAATGTTCAGAGAATC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGACAAAGGGGACGTAGCTaGCCCCGTAGATGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRQRGRS*PRRCRR
Trigger: CCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACAAAGGGGACGTAGCTaGCCCCGTAGATGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKQRGRS*PRRCRR
Trigger: CCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAGGCCAAAGCTCTTCTTaGTGGTCTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTGQSSS*WSPRWS
Trigger: AGACCACCGAGGAGACCATCAAGAAGAGCTTTGGCC...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAAGTCACGGATCTTCTTaGCCCTTTCCACGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTSHGSS*PFPRSL
Trigger: CAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACT...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINPGWAR*ERCRGS
Trigger: GCTACCCCTACAACGCTCTCATCGGGCCCAACCGGG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACTGGAACATGGAGTACTaGGCACCGATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNWNMEY*APMAGM
Trigger: CATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCA...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGATGGATACCGCAGGAATaGCGGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRWIPQE*RQQRLQ
Trigger: CTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCA...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGATACCGCAGGAATaGCGGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKWIPQE*RQQRLQ
Trigger: CTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACACCACCGTACTTGCGCTaGCCGTTCTCTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTPPYLR*PFSCTM
Trigger: CATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGG...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGCTCGCTTGGCCTCATaGTTGTGGCAGTACATCACG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNARLAS*LWQYIT
Trigger: CGTGATGTACTGCCACAAGCATGAGGCCAAGCGAGC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAGGTCCTGTTTCCAGCTaGGCCTCTCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRGPVSS*ASPSAS
Trigger: AGAGGCCGAGGGAGAGGCGCAGCTGGAAACAGGACC...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGGTCCTGTTTCCAGCTaGGCCTCTCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKGPVSS*ASPSAS
Trigger: AGAGGCCGAGGGAGAGGCGCAGCTGGAAACAGGACC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGCTTTCTCCTGCTGTTTaGCTTTGCCTTCGTGATATC +
Preference number: 4 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRLSPAV*LCLRDI
Trigger: GATATCACGAAGGCAAAGGCAAACAGCAGGAGAAAG...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATACCTCACAGCCACGCTaGGGATGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCATCCCCAGCGTGGCTGTGAGGT...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCTTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCATGGCTGCAGCACGATaGCTCTCATACTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCMAAAR*LSYSTK
Trigger: CTTTGTGGAGTATGAGAGCCATCGTGCTGCAGCCAT...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAGCTTGCGGCGTGCCATaGCTGCAGCACGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRACGVP*LQHDGS
Trigger: AGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGC...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKWWPHS*IRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAAGCCACCACCACCCTTaGCTGCCTTCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKSHHHP*LPSGSG
Trigger: CCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCT...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINGTPGP*GPVSSC
Trigger: GCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACGAGGTAGGAACCCCTaGGCCCTGGGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKRGRNP*ALGSCF
Trigger: GAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCAAAGGGGACGTAGCTaGCCCCGTAGATGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINQRGRS*PRRCRR
Trigger: CCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHPGWAR*ERCRGS
Trigger: GCTACCCCTACAACGCTCTCATCGGGCCCAACCGGG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTTGCCTTTGCCTTCGTaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPLPLPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCACGAAGGCAAAGGCAA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGCACCGCAATGGGGCTaGTCATGTGTTCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNAPQWG*SCVPLC
Trigger: ACACAATGGAACACATGATCAGCCCCATTGCGGTGC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTGGATACCGCAGGAATaGCGGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINWIPQE*RQQRLQ
Trigger: CTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCAGGATCTTCACTGTCTaGATCACATCTTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCRIFTV*ITSSST
Trigger: CGTGGACGAAGATGTGATGCAGACAGTGAAGATCCT...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAGCTGGCCCCGTAGATaGCGGCGGTGGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINSWPRR*RRWGFS
Trigger: AGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCT...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAGCCACCACCACCCTTaGCTGCCTTCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINSHHHP*LPSGSG
Trigger: CCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCT...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHGTPGP*GPVSSC
Trigger: GCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCC...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCGAGGTAGGAACCCCTaGGCCCTGGGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINRGRNP*ALGSCF
Trigger: GAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKWRLWQ*REQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATTGGATACCGCAGGAATaGCGGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHWIPQE*RQQRLQ
Trigger: CTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCA...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAGCGGTGGGGATTCTCTaGACATTTGGTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRAVGIL*TFGATV
Trigger: CACCGTGGCACCAAATGTTCAGAGAATCCCCACCGC...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKGVHRT*AARSLV
Trigger: TACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRGVHRT*AARSLV
Trigger: TACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCC...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGATTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATAGCTGGCCCCGTAGATaGCGGCGGTGGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHSWPRR*RRWGFS
Trigger: AGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCT...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGACCTCACAGCCACGCTaGGGATGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCATCCCCAGCGTGGCTGTGAGGT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACATGGCTGCAGCACGATaGCTCTCATACTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNMAAAR*LSYSTK
Trigger: CTTTGTGGAGTATGAGAGCCATCGTGCTGCAGCCAT...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATAGCCACCACCACCCTTaGCTGCCTTCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHSHHHP*LPSGSG
Trigger: CCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCT...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAAGTACTGAGCACCGATaGCAGGGATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRSTEHR*QGWPLC
Trigger: GCACAGTGGCCATCCCTGCCATCGGTGCTCAGTACT...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVPGWAR*ERCRGS
Trigger: GCTACCCCTACAACGCTCTCATCGGGCCCAACCGGG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCTTGCCTTTGCCTTCGTaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCLPLPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCACGAAGGCAAAGGCAA...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGAACATGGAGTACTaGGCACCGATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKWNMEY*APMAGM
Trigger: CATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGCTCGCTTGGCCTCATaGTTGTGGCAGTACATCACG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKARLAS*LWQYIT
Trigger: CGTGATGTACTGCCACAAGCATGAGGCCAAGCGAGC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACAGGATCTTCACTGTCTaGATCACATCTTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNRIFTV*ITSSST
Trigger: CGTGGACGAAGATGTGATGCAGACAGTGAAGATCCT...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAAGGTTGTTCATAGCATaGACAGCATCCTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTRLFIA*TASSRL
Trigger: TAGCCGTGAGGATGCTGTGCATGCTATGAACAACCT...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINTTTLG*LLVAGV
Trigger: TACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGT...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACACCTGCTGTTTGCCTTTaGCTTCGTGATATCGGCTAT +
Preference number: 4 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTPAVCL*LRDIGY
Trigger: ATAGCCGATATCACGAAGGCAAAGGCAAACAGCAGG...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCCCGAACGGCTCGCTTaGCCTCATGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHPERLA*PHACGS
Trigger: ACTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKQSTAI*WPHSWI
Trigger: GATCCAACTGTGGGGCCACCAGATTGCTGTGGACTG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGACCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRPFHAA*VELAKA
Trigger: AGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGG...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVGTPGP*GPVSSC
Trigger: GCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCAAAGGGGACGTAGCTaGCCCCGTAGATGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVQRGRS*PRRCRR
Trigger: CCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGCCAAAGCTCTTCTTaGTGGTCTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINGQSSS*WSPRWS
Trigger: AGACCACCGAGGAGACCATCAAGAAGAGCTTTGGCC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAGTCACGGATCTTCTTaGCCCTTTCCACGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINSHGSS*PFPRSL
Trigger: CAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACT...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGCACCGCAATGGGGCTaGTCATGTGTTCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKAPQWG*SCVPLC
Trigger: ACACAATGGAACACATGATCAGCCCCATTGCGGTGC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTGGATACCGCAGGAATaGCGGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCWIPQE*RQQRLQ
Trigger: CTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCACCGTACTTGCGCTaGCCGTTCTCTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINPPYLR*PFSCTM
Trigger: CATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGGTCCTGTTTCCAGCTaGGCCTCTCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVGPVSS*ASPSAS
Trigger: AGAGGCCGAGGGAGAGGCGCAGCTGGAAACAGGACC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGAGCTGGCCCCGTAGATaGCGGCGGTGGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVSWPRR*RRWGFS
Trigger: AGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACACCTCACAGCCACGCTaGGGATGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCATCCCCAGCGTGGCTGTGAGGT...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGCTTGCGGCGTGCCATaGCTGCAGCACGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVACGVP*LQHDGS
Trigger: AGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGCTTGCGGCGTGCCATaGCTGCAGCACGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVACGVP*LQHDGS
Trigger: AGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVWWPHS*IRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINQSTAI*WPHSWI
Trigger: GATCCAACTGTGGGGCCACCAGATTGCTGTGGACTG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINPFHAA*VELAKA
Trigger: AGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGAGCCACCACCACCCTTaGCTGCCTTCTGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVSHHHP*LPSGSG
Trigger: CCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKRRCRR*GFSEHL
Trigger: CAAATGTTCAGAGAATCCCCACCGCCGGCATCTACG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGGTAGACGTCGTGGATaGGCACCTGGAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVGRRRG*APGEQR
Trigger: CCGCTGCTCTCCAGGTGCCCATCCACGACGTCTACC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGGTAGACGTCGTGGATaGGCACCTGGAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVGRRRG*APGEQR
Trigger: CCGCTGCTCTCCAGGTGCCCATCCACGACGTCTACC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATGGCCAAAGCTCTTCTTaGTGGTCTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHGQSSS*WSPRWS
Trigger: AGACCACCGAGGAGACCATCAAGAAGAGCTTTGGCC...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATTGGAACATGGAGTACTaGGCACCGATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHWNMEY*APMAGM
Trigger: CATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCA...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGCACCGCAATGGGGCTaGTCATGTGTTCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINAPQWG*SCVPLC
Trigger: ACACAATGGAACACATGATCAGCCCCATTGCGGTGC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTGGATACCGCAGGAATaGCGGCAGCAGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGWIPQE*RQQRLQ
Trigger: CTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCCACCGTACTTGCGCTaGCCGTTCTCTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHPPYLR*PFSCTM
Trigger: CATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATGCTCGCTTGGCCTCATaGTTGTGGCAGTACATCACG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHARLAS*LWQYIT
Trigger: CGTGATGTACTGCCACAAGCATGAGGCCAAGCGAGC...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCGGTCCTGTTTCCAGCTaGGCCTCTCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGGPVSS*ASPSAS
Trigger: AGAGGCCGAGGGAGAGGCGCAGCTGGAAACAGGACC...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCGCTGTTCATGGCTGTaGCGGAATCTTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINRCSWL*RNLQQS
Trigger: TGACTGCTGAAGATTCCGCCACAGCCATGAACAGCG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGATTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCCCGAACGGCTCGCTTaGCCTCATGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVPERLA*PHACGS
Trigger: ACTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAATGGCTGCAGCACGATaGCTCTCATACTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKMAAAR*LSYSTK
Trigger: CTTTGTGGAGTATGAGAGCCATCGTGCTGCAGCCAT...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCGCTTGCGGCGTGCCATaGCTGCAGCACGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGACGVP*LQHDGS
Trigger: AGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGC...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGWWPHS*IRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGA +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINDYFRG*GCLEHG
Trigger: TCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTCAAAGGGGACGTAGCTaGCCCCGTAGATGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPQRGRS*PRRCRR
Trigger: CCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVWRLWQ*REQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCA...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVWRLWQ*REQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTCGTGGATGGGCACCTaGAGAGCAGCGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHSWMGT*RAAGKA
Trigger: GGCCTTCCCCGCTGCTCTCCAGGTGCCCATCCACGA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTGCGGTGGGGATTCTCTaGACATTTGGTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCAVGIL*TFGATV
Trigger: CACCGTGGCACCAAATGTTCAGAGAATCCCCACCGC...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVYQCQQ*SLIGRA
Trigger: GGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVYQCQQ*SLIGRA
Trigger: GGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATA...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVGVHRT*AARSLV
Trigger: TACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVGVHRT*AARSLV
Trigger: TACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAAGGATCTTCACTGTCTaGATCACATCTTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKRIFTV*ITSSST
Trigger: CGTGGACGAAGATGTGATGCAGACAGTGAAGATCCT...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAAGGTTGTTCATAGCATaGACAGCATCCTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRRLFIA*TASSRL
Trigger: TAGCCGTGAGGATGCTGTGCATGCTATGAACAACCT...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVTTTLG*LLVAGV
Trigger: TACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACCTGCTGTTTGCCTTTaGCTTCGTGATATCGGCTAT +
Preference number: 4 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKPAVCL*LRDIGY
Trigger: ATAGCCGATATCACGAAGGCAAAGGCAAACAGCAGG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCCCGAACGGCTCGCTTaGCCTCATGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGPERLA*PHACGS
Trigger: ACTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTGCTTGCGGCGTGCCATaGCTGCAGCACGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPACGVP*LQHDGS
Trigger: AGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGC...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHWWPHS*IRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCAGCCTGGGTTGAACTaGCCAAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGAGGTAGGAACCCCTaGGCCCTGGGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRGRNP*ALGSCF
Trigger: GAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGAGTACTGAGCACCGATaGCAGGGATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVSTEHR*QGWPLC
Trigger: GCACAGTGGCCATCCCTGCCATCGGTGCTCAGTACT...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGAGTACTGAGCACCGATaGCAGGGATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVSTEHR*QGWPLC
Trigger: GCACAGTGGCCATCCCTGCCATCGGTGCTCAGTACT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHRRCRR*GFSEHL
Trigger: CAAATGTTCAGAGAATCCCCACCGCCGGCATCTACG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGGTAGACGTCGTGGATaGGCACCTGGAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHGRRRG*APGEQR
Trigger: CCGCTGCTCTCCAGGTGCCCATCCACGACGTCTACC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTGGTAGACGTCGTGGATaGGCACCTGGAGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPGRRRG*APGEQR
Trigger: CCGCTGCTCTCCAGGTGCCCATCCACGACGTCTACC...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCACCGATGGCAGGGATaGCCATTTTCACGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINHRWQG*PFSRSS
Trigger: ACTACTTCGTGAAAATGGCCATCCCTGCCATCGGTG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094756.11
CDS-3UTR TCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCCACGCAGCCTGGGTTaGACTGGCCAAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGPRSLG*TGQSSS
Trigger: AGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGYQCQQ*SLIGRA
Trigger: GGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCCACCGTACTTGCGCTaGCCGTTCTCTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVPPYLR*PFSCTM
Trigger: CATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCCACCGTACTTGCGCTaGCCGTTCTCTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCPPYLR*PFSCTM
Trigger: CATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGCTCGCTTGGCCTCATaGTTGTGGCAGTACATCACG +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVARLAS*LWQYIT
Trigger: CGTGATGTACTGCCACAAGCATGAGGCCAAGCGAGC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTGCTCGCTTGGCCTCATaGTTGTGGCAGTACATCACG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCARLAS*LWQYIT
Trigger: CGTGATGTACTGCCACAAGCATGAGGCCAAGCGAGC...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGTTTLG*LLVAGV
Trigger: TACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGT...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCTGCTGTTTGCCTTTaGCTTCGTGATATCGGCTAT +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINPAVCL*LRDIGY
Trigger: ATAGCCGATATCACGAAGGCAAAGGCAAACAGCAGG...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCCCGAACGGCTCGCTTaGCCTCATGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHPERLA*PHACGS
Trigger: ACTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTCCCGAACGGCTCGCTTaGCCTCATGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPPERLA*PHACGS
Trigger: ACTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGG...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCQSTAI*WPHSWI
Trigger: GATCCAACTGTGGGGCCACCAGATTGCTGTGGACTG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVQSTAI*WPHSWI
Trigger: GATCCAACTGTGGGGCCACCAGATTGCTGTGGACTG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCAGCCTGGGTTGAACTaGCCAAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVPFHAA*VELAKA
Trigger: AGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCPFHAA*VELAKA
Trigger: AGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGATTCTCTGAACATTTaGTGCCACGGTGTACACAGG +
Preference number: 4 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINDSLNI*CHGVHR
Trigger: CCTGTGTACACCGTGGCACCAAATGTTCAGAGAATC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHWRLWQ*REQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVRSSVV*RLWQWR
Trigger: CCGCCACTGCCACAATCGCCACACTACAGAAGAACG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCRSSVV*RLWQWR
Trigger: CCGCCACTGCCACAATCGCCACACTACAGAAGAACG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCAGTCACGGATCTTCTTaGCCCTTTCCACGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGSHGSS*PFPRSL
Trigger: CAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACT...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTGGAACATGGAGTACTaGGCACCGATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGWNMEY*APMAGM
Trigger: CATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGCGGTGGGGATTCTCTaGACATTTGGTGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHAVGIL*TFGATV
Trigger: CACCGTGGCACCAAATGTTCAGAGAATCCCCACCGC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCCACCGTACTTGCGCTaGCCGTTCTCTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGPPYLR*PFSCTM
Trigger: CATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGTCACGTGGGATCTTaGCCACGAAGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRHVGS*PRRPHS
Trigger: GCTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTTTCGGGGCTGGGGCTaGCTGGAACATGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPFRGWG*LEHGVL
Trigger: CAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCGCTGTTCATGGCTGTaGCGGAATCTTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVRCSWL*RNLQQS
Trigger: TGACTGCTGAAGATTCCGCCACAGCCATGAACAGCG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCT +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRSTRS*VAALRP
Trigger: AGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCT...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACAGTACTGAGCACCGATaGCAGGGATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHSTEHR*QGWPLC
Trigger: GCACAGTGGCCATCCCTGCCATCGGTGCTCAGTACT...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTGGGCTGCCTGGAACATaGAGTACTGAGCACCGATGG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPGLPGT*STEHRW
Trigger: CCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCC...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGA +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVDYFRG*GCLEHG
Trigger: TCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCRRCRR*GFSEHL
Trigger: CAAATGTTCAGAGAATCCCCACCGCCGGCATCTACG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPVVWRL*QWREQQ
Trigger: TTGCTGCTCCCGCCACTGCCACAATCGCCACACTAC...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRSSVV*RLWQWR
Trigger: CCGCCACTGCCACAATCGCCACACTACAGAAGAACG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTGGAACATGGAGTACTaGGCACCGATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPWNMEY*APMAGM
Trigger: CATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCGCTGTTCATGGCTGTaGCGGAATCTTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRCSWL*RNLQQS
Trigger: TGACTGCTGAAGATTCCGCCACAGCCATGAACAGCG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTCATACACGTCACGTaGGATCTTGCCCACGAAGAC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVFIHVT*DLAHED
Trigger: GTCTTCGTGGGCAAGATCCCACGTGACGTGTATGAA...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGATGGCTGCAGCACGATaGCTCTCATACTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVMAAAR*LSYSTK
Trigger: CTTTGTGGAGTATGAGAGCCATCGTGCTGCAGCCAT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCAGCCTGGGTTGAACTaGCCAAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRRCRR*GFSEHL
Trigger: CAAATGTTCAGAGAATCCCCACCGCCGGCATCTACG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRSSVV*RLWQWR
Trigger: CCGCCACTGCCACAATCGCCACACTACAGAAGAACG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR CAA 72 bp GTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTaGCACGTGTACCAACCCGACACGTTCTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLFDNILLHLQV*HVYQPDTFFLH
Trigger: ATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
3UTR CAA 72 bp TTTCGCATTACACTACAGGCCATGAACTTGGCAACTTaGGCGAGCAAGCGTCAGAAGTTATTTACAATCTAC +
Preference number: 4 (lower is better)
Translates to: FRITLQAMNLAT*ASKRQKLFTIY
Trigger: GTAGATTGTAAATAACTTCTGACGCTTGCTCGCCAAAGTTGCCAAGTTCATGGCCTGTAGTGTAATGCGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATTTGCCTTTGCCTTCGTaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: VASLLEMYERGPAKLKSHLPLPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCACGAAGGCAAAGGCAA...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGCACCGCAATGGGGCTaGTCATGTGTTCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHAPQWG*SCVPLC
Trigger: ACACAATGGAACACATGATCAGCCCCATTGCGGTGC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGAGGATCTTCACTGTCTaGATCACATCTTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVRIFTV*ITSSST
Trigger: CGTGGACGAAGATGTGATGCAGACAGTGAAGATCCT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTAGGTTGTTCATAGCATaGACAGCATCCTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCRLFIA*TASSRL
Trigger: TAGCCGTGAGGATGCTGTGCATGCTATGAACAACCT...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCCTGCTGTTTGCCTTTaGCTTCGTGATATCGGCTAT +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVPAVCL*LRDIGY
Trigger: ATAGCCGATATCACGAAGGCAAAGGCAAACAGCAGG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGCTGTTCATGGCTGTaGCGGAATCTTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRCSWL*RNLQQS
Trigger: TGACTGCTGAAGATTCCGCCACAGCCATGAACAGCG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCAGCCTGGGTTGAACTaGCCAAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGA +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHDYFRG*GCLEHG
Trigger: TCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTGATTCTCTGAACATTTaGTGCCACGGTGTACACAGG +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCDSLNI*CHGVHR
Trigger: CCTGTGTACACCGTGGCACCAAATGTTCAGAGAATC...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRRCRR*GFSEHL
Trigger: CAAATGTTCAGAGAATCCCCACCGCCGGCATCTACG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCAGGTTGTTCATAGCATaGACAGCATCCTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGRLFIA*TASSRL
Trigger: TAGCCGTGAGGATGCTGTGCATGCTATGAACAACCT...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCTTTCTCCTGCTGTTTaGCTTTGCCTTCGTGATATC +
Preference number: 4 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVLSPAV*LCLRDI
Trigger: GATATCACGAAGGCAAAGGCAAACAGCAGGAGAAAG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCTTTCTCCTGCTGTTTaGCTTTGCCTTCGTGATATC +
Preference number: 4 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVLSPAV*LCLRDI
Trigger: GATATCACGAAGGCAAAGGCAAACAGCAGGAGAAAG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTATGGCTGCAGCACGATaGCTCTCATACTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPMAAAR*LSYSTK
Trigger: CTTTGTGGAGTATGAGAGCCATCGTGCTGCAGCCAT...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCAGCCTGGGTTGAACTaGCCAAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTTGCCTTTGCCTTCGTaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCLPLPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCACGAAGGCAAAGGCAA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACAGGATCTTCACTGTCTaGATCACATCTTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHRIFTV*ITSSST
Trigger: CGTGGACGAAGATGTGATGCAGACAGTGAAGATCCT...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCCTGCTGTTTGCCTTTaGCTTCGTGATATCGGCTAT +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHPAVCL*LRDIGY
Trigger: ATAGCCGATATCACGAAGGCAAAGGCAAACAGCAGG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCCTTTCTCCTGCTGTTTaGCTTTGCCTTCGTGATATC +
Preference number: 4 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGLSPAV*LCLRDI
Trigger: GATATCACGAAGGCAAAGGCAAACAGCAGGAGAAAG...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTGATTCTCTGAACATTTaGTGCCACGGTGTACACAGG +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPDSLNI*CHGVHR
Trigger: CCTGTGTACACCGTGGCACCAAATGTTCAGAGAATC...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR GCA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCTTTCTCCTGCTGTTTaGCTTTGCCTTCGTGATATC +
Preference number: 4 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHLSPAV*LCLRDI
Trigger: GATATCACGAAGGCAAAGGCAAACAGCAGGAGAAAG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR TCA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTTGCCTTTGCCTTCGTaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPLPLPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCACGAAGGCAAAGGCAA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS GCA 90 bp GCTGGGGATGCGGGCCCTCCCAGCCGGGCGGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTACCATGGTGTAGCCGGTGCGCTCTA +
Preference number: 5 (lower is better)
Translates to: AGDAGPPSRAGVHRT*AARSLVPWCSRCAL
Trigger: TAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCCGCCCGGCTGGGAGGGCCCGCATCCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS GCA 90 bp GGGTTGCTGCGCTACGGCCTCAGCCGAGCCACCACCACCCTTGGCTaGCTTCTGGTAGCGGGAGTACTGTTCCTTGTCCACGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GLLRYGLSRATTTLG*LLVAGVLFLVHGLG
Trigger: GCCAAGCCCGTGGACAAGGAACAGTACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCTCGGCTGAGGCCGTAGCGCAGCAACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp ACAGTGCAGCCTCATTGGGCGCGCCCGCCACACCCTCCGGTACCTTaGTGGAGGACCCCACTGTTGGATCGCTGTTCATGGCTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: TVQPHWARPPHPPVP*WRTPLLDRCSWLWR
Trigger: CCGCCACAGCCATGAACAGCGATCCAACAGTGGGGTCCTCCACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 90 bp ACACGGCAGCCGCGGCGTTCTTCTGTAGTGTGGCGATTGTGGCAGTaGCGGGAGCAGCAAAGGGGACGTAGCTGGCCCCGTAGATGCCGG +
Preference number: 5 (lower is better)
Translates to: TRQPRRSSVVWRLWQ*REQQRGRSWPRRCR
Trigger: CCGGCATCTACGGGGCCAGCTACGTCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCACACTACAGAAGAACGCCGCGGCTGCCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp CGGCGTAGCCCCCATACACGGCAGCCGCGGCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGGGAGCAGCAAAGGGGACGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: RRSPHTRQPRRSSVV*RLWQWREQQRGRSW
Trigger: CCAGCTACGTCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCACACTACAGAAGAACGCCGCGGCTGCCGTGTATGGGGGCTACGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 90 bp CTGCCCGTTCTCTTGTACCATGGTGTAGCCGGTGCGCTCTATCAGTaGCAACAGTGCAGCCTCATTGGGCGCGCCCGCCACACCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LPVLLYHGVAGALYQ*QQCSLIGRARHTLR
Trigger: CCGGAGGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 90 bp GTGCAGCCTCATTGGGCGCGCCCGCCACACCCTCCGGTACCTTGGTaGAGGACCCCACTGTTGGATCGCTGTTCATGGCTGTGGCGGAAT +
Preference number: 5 (lower is better)
Translates to: VQPHWARPPHPPVPW*RTPLLDRCSWLWRN
Trigger: ATTCCGCCACAGCCATGAACAGCGATCCAACAGTGGGGTCCTCCACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATGAGGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 90 bp ATCTCTGGCTCGGCCCAGTCCACAGCAATCTGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGCTTGCGGCGTGCCATGGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: ISGSAQSTAIWWPHS*IRPGMSLRRAMAAA
Trigger: TGCTGCAGCCATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGAGCCAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp AGCTGGGTTGCTGCGCTACGGCCTCAGCCGAGCCACCACCACCCTTaGCTGCCTTCTGGTAGCGGGAGTACTGTTCCTTGTCCACGGGCT +
Preference number: 5 (lower is better)
Translates to: SWVAALRPQPSHHHP*LPSGSGSTVPCPRA
Trigger: AGCCCGTGGACAAGGAACAGTACTCCCGCTACCAGAAGGCAGCCAAGGGTGGTGGTGGCTCGGCTGAGGCCGTAGCGCAGCAACCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp ACCACGGCCAGCGGAATATCCTCCGAGGTAGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGCGCCTCTCCCTCGGCCTCTTATGCT +
Preference number: 5 (lower is better)
Translates to: TTASGISSEVGTPGP*GPVSSCASPSASYA
Trigger: AGCATAAGAGGCCGAGGGAGAGGCGCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCGGAGGATATTCCGCTGGCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp AGCCGTAGTAGGCCAACGTGTAGGGGTCACAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCTCAGCCGAGCCACCACCACCCTTGG +
Preference number: 5 (lower is better)
Translates to: SRSRPTCRGHRSTRS*VAALRPQPSHHHPW
Trigger: CCAAGGGTGGTGGTGGCTCGGCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCTGTGACCCCTACACGTTGGCCTACTACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 90 bp CTCTTGTACCATGGTGTAGCCGGTGCGCTCTATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCCCGCCACACCCTCCGGTACCTTGGT +
Preference number: 5 (lower is better)
Translates to: LLYHGVAGALYQCQQ*SLIGRARHTLRYLG
Trigger: ACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS GCA 90 bp CACCGTACTTGCGCTGCCCGTTCTCTTGTACCATGGTGTAGCCGGTaGGCTCTATCAGTGCCAACAGTGCAGCCTCATTGGGCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: HRTCAARSLVPWCSR*ALSVPTVQPHWARP
Trigger: CGGGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 90 bp CGGGCGGGGGTCCACCGTACTTGCGCTGCCCGTTCTCTTGTACCATaGTGTAGCCGGTGCGCTCTATCAGTGCCAACAGTGCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: RAGVHRTCAARSLVP*CSRCALSVPTVQPH
Trigger: ATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCCGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 90 bp TGGTGCCACGGTGTACACAGGAGTTATTGGACGGCCCTGGAAAGGTaGCGGTGTGGATACCGCAGGAATGACGGCAGCAGCGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WCHGVHRSYWTALER*RCGYRRNDGSSGCS
Trigger: GCTGCAGCCGCTGCTGCCGTCATTCCTGCGGTATCCACACCGCCACCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPLVAPQ*DPTRHE
Trigger: CTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAG...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 90 bp AGTCCACAGCAATCTGGTGGCCCCACAGTTGGATCCGACCCGGCATaGGCTTGCGGCGTGCCATGGCTGCAGCACGATGGCTCTCATACT +
Preference number: 5 (lower is better)
Translates to: SPQQSGGPTVGSDPA*ACGVPWLQHDGSHT
Trigger: AGTATGAGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGGGGGTCCACCGTACTaGCGCTGCCCGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPGGPPY*RCPFSC
Trigger: ACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGGGGGGTCCACCGTACTaGCGCTGCCCGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRGGPPY*RCPFSC
Trigger: ACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCC...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGACGCCCTCGGTGACCTaGGCGATCTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPTPSVT*AISSRI
Trigger: GATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGT...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGCGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPVHVAG*LRYGLS
Trigger: GCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTAC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 90 bp TACAGCACACACCCAGCAGACGGCCGGGGCGGATCTCGTAGTTGTTaGGTTCCCGAACGGCTCGCTTGGCCTCATGCTTGTGGCAGTACA +
Preference number: 5 (lower is better)
Translates to: YSTHPADGRGGSRSC*VPERLAWPHACGST
Trigger: TGTACTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGAACTCAACAACTACGAGATCCGCCCCGGCCGTCTGCTGGGTGTGTGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS GCA 90 bp GCTGGCCCCGTAGATGCCGGCGGTGGGGATTCTCTGAACATTTGGTaGCACGGTGTACACAGGAGTTATTGGACGGCCCTGGAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: AGPVDAGGGDSLNIW*HGVHRSYWTALERW
Trigger: CCACCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp CGGGAGCAGCAAAGGGGACGTAGCTGGCCCCGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTGGTGCCACGGTGTACACAGGAGTTA +
Preference number: 5 (lower is better)
Translates to: REQQRGRSWPRRCRR*GFSEHLVPRCTQEL
Trigger: TAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTGCTGCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGAACAGTGCAGCCTCATaGGGCGCGCCCGCCACACCC +
Preference number: 5 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATNSAAS*GAPATP
Trigger: GGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTT...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGTCTGTAGTGTGGCGATaGTGGCAGTGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRSVVWR*WQWREQ
Trigger: CTGCTCCCGCCACTGCCACAATCGCCACACTACAGA...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS CCA 90 bp GTAGCTGGCCCCGTAGATGCCGGCGGTGGGGATTCTCTGAACATTTaGTGCCACGGTGTACACAGGAGTTATTGGACGGCCCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: VAGPVDAGGGDSLNI*CHGVHRSYWTALER
Trigger: CCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGACGTCACGTGGGATCTaGCCCACGAAGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPTSRGI*PTKTSQ
Trigger: CTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACGT...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCTCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGTCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRSTQPG*NWPKLF
Trigger: GAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCVHVAG*LRYGLS
Trigger: GCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTAC...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPWPKLF*MVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGATGAAGAGGCGGCAGTaGTCCACACTACAGCACACA +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPMKRRQ*STLQHT
Trigger: TGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCAT...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGATGAAGAGGCGGCAGTaGTCCACACTACAGCACACA +
Preference number: 5 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRMKRRQ*STLQHT
Trigger: TGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCAT...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACGCCCTCGGTGACCTaGGCGATCTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNTPSVT*AISSRI
Trigger: GATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGT...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGC +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPSSSVP*RLFIAC
Trigger: GCATGCTATGAACAACCTCAACGGCACAGAGCTGGA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACACGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACCGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNVHVAG*LRYGLS
Trigger: GCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTAC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS CCA 90 bp GAGGATCTTCACTGTCTGCATCACATCTTCGTCCACGTCAATCTCTaGCTCGGCCCAGTCCACAGCAATCTGGTGGCCCCACAGTTGGAT +
Preference number: 5 (lower is better)
Translates to: EDLHCLHHIFVHVNL*LGPVHSNLVAPQLD
Trigger: ATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGAGCCAGAGATTGACGTGGACGAAGATGTGATGCAGACAGTGAAGATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp CACGAAGGCGTAGTCACGGATCTTCTTGACCCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCTCTTCTTGATGGTCTCCTCGGTGGT +
Preference number: 5 (lower is better)
Translates to: HEGVVTDLLDPFHAA*VELAKALLDGLLGG
Trigger: ACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACTACGCCTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 90 bp GGGGATTCTCTGAACATTTGGTGCCACGGTGTACACAGGAGTTATTaGACGGCCCTGGAAAGGTGGCGGTGTGGATACCGCAGGAATGAC +
Preference number: 5 (lower is better)
Translates to: GDSLNIWCHGVHRSY*TALERWRCGYRRND
Trigger: GTCATTCCTGCGGTATCCACACCGCCACCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAAACAGTGCAGCCTCATaGGGCGCGCCCGCCACACCC +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKNSAAS*GAPATP
Trigger: GGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTT...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPSVPLR*FIACTA
Trigger: TGCTGTGCATGCTATGAACAACCTCAACGGCACAGA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGTCCTTGTCCACGGGCTaGGCCAGCGTGACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATSLSTG*ASVTSK
Trigger: CTTAGAAGTCACGCTGGCCAAGCCCGTGGACAAGGA...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGGGATTCTCTGAACATTaGGTGCCACGGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPGFSEH*VPRCTQ
Trigger: CTGTGTACACCGTGGCACCAAATGTTCAGAGAATCC...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAACAGTGCAGCCTCATaGGGCGCGCCCGCCACACCC +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINNSAAS*GAPATP
Trigger: GGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTT...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAACGTCACGTGGGATCTaGCCCACGAAGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTTSRGI*PTKTSQ
Trigger: CTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACGT...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAACTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKLVAPQ*DPTRHE
Trigger: CTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAG...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACTCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNSTQPG*NWPKLF
Trigger: GAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ACGCCTCTCACTCTCCCAGCTGCTCTATACCACGCAATAAGGAAGGAGGGATGCTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGC +
Preference number: 5 (lower is better)
Translates to: TPLTLPAALYHAIRKEGCSSSVP*RLFIAC
Trigger: GCATGCTATGAACAACCTCAACGGCACAGAGCTGGA...GCATCCCTCCTTCCTTATTGCGTGGTATAGAGCAGCTGGGAGAGTGAGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS CCA 90 bp GTGTTCCATTGTGTGGATCTTGCCATCTTCGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGAGTACTGAGCACCGATGGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: VFHCVDLAIFDYFRG*GCLEHGVLSTDGRD
Trigger: ATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATCGAAGATGGCAAGATCCACACAATGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGATCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATGTGTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGATGAAGAGGCGGCAGTaGTCCACACTACAGCACACA +
Preference number: 5 (lower is better)
Translates to: MCMPVFTCPCSPTKCRATMKRRQ*STLQHT
Trigger: TGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCAT...CGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACAGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS TCA 90 bp ACATCACGAAGGCATAGCCGCGGTTCTTGCCATCGAAATCCATCATaGGTCGCAGCTCATAGATGCGACCTACGGTCTCAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: TSRRHSRGSCHRNPS*VAAHRCDLRSQTQA
Trigger: TGCCTGTGTTTGAGACCGTAGGTCGCATCTATGAGCTGCGACTCATGATGGATTTCGATGGCAAGAACCGCGGCTATGCCTTCGTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHLVAPQ*DPTRHE
Trigger: CTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGC +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNSSSVP*RLFIAC
Trigger: GCATGCTATGAACAACCTCAACGGCACAGAGCTGGA...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AATAAAGTGTTCCTTCAGCGGGGTTTGGTGGCTTGCCTTGGCTCCGGTCCCCCGTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: NKVFLQRGLVACLGSGPPLMATG*TGEISK
Trigger: TTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAA...CGGGGGACCGGAGCCAAGGCAAGCCACCAAACCCCGCTGAAGGAACACTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTATGCCCGTGTTCACCTGCCCGTGTTCACCTACCAAATGCAGAGCAACGGCGGTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: VCPCSPARVHLPNAEQRRLMATG*TGEISK
Trigger: TTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAA...CCGCCGTTGCTCTGCATTTGGTAGGTGAACACGGGCAGGTGAACACGGGCATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS CCA 90 bp AGCACCGATGGCAGGGATGGCCACTGTGCCAGGTTTAATGGCAACTaGATTGACAGGAGAGATCTCCAAATTCGGCACAAGTTCATATCC +
Preference number: 5 (lower is better)
Translates to: STDGRDGHCARFNGN*IDRRDLQIRHKFIS
Trigger: GGATATGAACTTGTGCCGAATTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAAACCTGGCACAGTGGCCATCCCTGCCATCGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGAACAGTGCAGCCTCATaGGGCGCGCCCGCCACACCC +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVNSAAS*GAPATP
Trigger: GGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTT...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGAACGTCACGTGGGATCTaGCCCACGAAGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRTSRGI*PTKTSQ
Trigger: CTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACGT...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATACGCCCTCGGTGACCTaGGCGATCTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHTPSVT*AISSRI
Trigger: GATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGT...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKSTQPG*NWPKLF
Trigger: GAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACACATCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: KHRASDIPDGTRHSVGNTSVPLR*FIACTA
Trigger: TGCTGTGCATGCTATGAACAACCTCAACGGCACAGA...TGTGTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCTTGTCCACGGGCTaGGCCAGCGTGACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKSLSTG*ASVTSK
Trigger: CTTAGAAGTCACGCTGGCCAAGCCCGTGGACAAGGA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATCGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCLVAPQ*DPTRHE
Trigger: CTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAG...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVLVAPQ*DPTRHE
Trigger: CTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTTCCAGTGTTGGGACTCTGGATGTGAGGAGTCTTTTCCATGTTGGCTTAAGATGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: LSSVGTLDVRSLFHVGLRWPKLF*MVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCA...TCTTAAGCCAACATGGAAAAGACTCCTCACATCCAGAGTCCCAACACTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKWPKLF*MVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTCCTTGTCCACGGGCTaGGCCAGCGTGACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINSLSTG*ASVTSK
Trigger: CTTAGAAGTCACGCTGGCCAAGCCCGTGGACAAGGA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATTCTGTAGTGTGGCGATaGTGGCAGTGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHSVVWR*WQWREQ
Trigger: CTGCTCCCGCCACTGCCACAATCGCCACACTACAGA...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACAACAGTGCAGCCTCATaGGGCGCGCCCGCCACACCC +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHNSAAS*GAPATP
Trigger: GGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTT...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGGGGGTCCACCGTACTaGCGCTGCCCGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVGGPPY*RCPFSC
Trigger: ACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGGGGGTCCACCGTACTaGCGCTGCCCGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVGGPPY*RCPFSC
Trigger: ACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAATGAAGAGGCGGCAGTaGTCCACACTACAGCACACA +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKMKRRQ*STLQHT
Trigger: TGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCAT...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGACGCCCTCGGTGACCTaGGCGATCTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVTPSVT*AISSRI
Trigger: GATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGT...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTACGCCCTCGGTGACCTaGGCGATCTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCTPSVT*AISSRI
Trigger: GATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGT...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINWPKLF*MVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATTCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHSTQPG*NWPKLF
Trigger: GAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGC +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKSSSVP*RLFIAC
Trigger: GCATGCTATGAACAACCTCAACGGCACAGAGCTGGA...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGCGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGCGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVVHVAG*LRYGLS
Trigger: GCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTAC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVVHVAG*LRYGLS
Trigger: GCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTAC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 90 bp AGATCTCCAAATTCGGCACAAGTTCATATCCTTTCTCCTGCTGTTTaGCTTTGCCTTCGTGATATCGGCTATATATACCACGGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: RSPNSAQVHILSPAV*LCLRDIGYIYHGQR
Trigger: CCGCTGGCCGTGGTATATATAGCCGATATCACGAAGGCAAAGGCAAACAGCAGGAGAAAGGATATGAACTTGTGCCGAATTTGGAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTGCGCTGCCCGTTCTCTaGTACCATGGTGTAGCCGGT +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCALPVL*YHGVAG
Trigger: ACCGGCTACACCATGGTACAAGAGAACGGGCAGCGC...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGCGCTGCCCGTTCTCTaGTACCATGGTGTAGCCGGT +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVALPVL*YHGVAG
Trigger: ACCGGCTACACCATGGTACAAGAGAACGGGCAGCGC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCGGGGGTCCACCGTACTaGCGCTGCCCGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGGGPPY*RCPFSC
Trigger: ACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCC...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAG +
Preference number: 5 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPLVAPQ*DPTRHE
Trigger: CTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAG...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGVHVAG*LRYGLS
Trigger: GCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTAC...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AACAAACACAGGGCTTCCGACATCCCTGATGGCACCAGGCATTCTGTAGGAAACTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: NKHRASDIPDGTRHSVGNLMATG*TGEISK
Trigger: TTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAA...GTTTCCTACAGAATGCCTGGTGCCATCAGGGATGTCGGAAGCCCTGTGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp CTTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAAGGATTCTCTGAACATTaGGTGCCACGGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: LHLQVLHVYQPDTFFLHKGFSEH*VPRCTQ
Trigger: CTGTGTACACCGTGGCACCAAATGTTCAGAGAATCC...TTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTCTGTAGTGTGGCGATaGTGGCAGTGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVSVVWR*WQWREQ
Trigger: CTGCTCCCGCCACTGCCACAATCGCCACACTACAGA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTACGTCACGTGGGATCTaGCCCACGAAGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCTSRGI*PTKTSQ
Trigger: CTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACGT...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGACGTCACGTGGGATCTaGCCCACGAAGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVTSRGI*PTKTSQ
Trigger: CTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACGT...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGACGTCACGTGGGATCTaGCCCACGAAGACCTCACAG +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVTSRGI*PTKTSQ
Trigger: CTGTGAGGTCTTCGTGGGCAAGATCCCACGTGACGT...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTCCCGAACGGCTCGCTaGGCCTCATGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPSRTAR*ASCLWQ
Trigger: CTGCCACAAGCATGAGGCCAAGCGAGCCGTTCGGGA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp GTCGCAAGTCTTTTAGAAATGTATGAACGCGGGCCTGCTAAGTTGAAAAGTCATATGAAGAGGCGGCAGTaGTCCACACTACAGCACACA +
Preference number: 5 (lower is better)
Translates to: VASLLEMYERGPAKLKSHMKRRQ*STLQHT
Trigger: TGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCAT...ATGACTTTTCAACTTAGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACACGCCCTCGGTGACCTaGGCGATCTCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHTPSVT*AISSRI
Trigger: GATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGT...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVSTQPG*NWPKLF
Trigger: GAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACCGGGAGTACTGTTCCTaGTCCACGGGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHREYCS*STGLAS
Trigger: GCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCCG...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATGGATTCTCTGAACATTaGGTGCCACGGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINGFSEH*VPRCTQ
Trigger: CTGTGTACACCGTGGCACCAAATGTTCAGAGAATCC...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTCTGTAGTGTGGCGATaGTGGCAGTGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGSVVWR*WQWREQ
Trigger: CTGCTCCCGCCACTGCCACAATCGCCACACTACAGA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGCGCTGCCCGTTCTCTaGTACCATGGTGTAGCCGGT +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHALPVL*YHGVAG
Trigger: ACCGGCTACACCATGGTACAAGAGAACGGGCAGCGC...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTGCGCTGCCCGTTCTCTaGTACCATGGTGTAGCCGGT +
Preference number: 5 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPALPVL*YHGVAG
Trigger: ACCGGCTACACCATGGTACAAGAGAACGGGCAGCGC...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGCATACACAATCACGTaGAGTACGCCCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVAYTIT*STPSVT
Trigger: GGTCACCGAGGGCGTACTCAACGTGATTGTGTATGC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVWPKLF*MVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTCCTTGTCCACGGGCTaGGCCAGCGTGACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGSLSTG*ASVTSK
Trigger: CTTAGAAGTCACGCTGGCCAAGCCCGTGGACAAGGA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTCTGTAGTGTGGCGATaGTGGCAGTGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHSVVWR*WQWREQ
Trigger: CTGCTCCCGCCACTGCCACAATCGCCACACTACAGA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTCTGTAGTGTGGCGATaGTGGCAGTGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPSVVWR*WQWREQ
Trigger: CTGCTCCCGCCACTGCCACAATCGCCACACTACAGA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGATGAAGAGGCGGCAGTaGTCCACACTACAGCACACA +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVMKRRQ*STLQHT
Trigger: TGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCAT...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTAGAAAGGTCAGGTTTCATACTGAACAATTAAATAGCTATGCAGAGATGCCTTCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: IRKVRFHTEQLNSYAEMPSTQPG*NWPKLF
Trigger: GAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA...AGGCATCTCTGCATAGCTATTTAATTGTTCAGTATGAAACCTGACCTTTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGC +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCSSSVP*RLFIAC
Trigger: GCATGCTATGAACAACCTCAACGGCACAGAGCTGGA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTCCTTGTCCACGGGCTaGGCCAGCGTGACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHSLSTG*ASVTSK
Trigger: CTTAGAAGTCACGCTGGCCAAGCCCGTGGACAAGGA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHWPKLF*MVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCSVPLR*FIACTA
Trigger: TGCTGTGCATGCTATGAACAACCTCAACGGCACAGA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: YFSVLFDNILLHLQVLHVSVPLR*FIACTA
Trigger: TGCTGTGCATGCTATGAACAACCTCAACGGCACAGA...CACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVSVPLR*FIACTA
Trigger: TGCTGTGCATGCTATGAACAACCTCAACGGCACAGA...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGC +
Preference number: 5 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGSSSVP*RLFIAC
Trigger: GCATGCTATGAACAACCTCAACGGCACAGAGCTGGA...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp TTCACCTGCAGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FTCRFCTCTNPTRSFFINLMATG*TGEISK
Trigger: TTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAA...ATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCTGCAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTGGATTCTCTGAACATTaGGTGCCACGGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCGFSEH*VPRCTQ
Trigger: CTGTGTACACCGTGGCACCAAATGTTCAGAGAATCC...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AGGTTTTGCACGTGTACCAACCCGACACGTTCTTTCTTCATAAATAATAAAGTGGGATTCTCTGAACATTaGGTGCCACGGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: RFCTCTNPTRSFFINNKVGFSEH*VPRCTQ
Trigger: CTGTGTACACCGTGGCACCAAATGTTCAGAGAATCC...CACTTTATTATTTATGAAGAAAGAACGTGTCGGGTTGGTACACGTGCAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAAAACCAAACCTCTGTACAAAAGCAGAAGAGCATACAAACTTTAAGAGATGGCGGATTCTCTGAACATTaGGTGCCACGGTGTACACAG +
Preference number: 5 (lower is better)
Translates to: KNQTSVQKQKSIQTLRDGGFSEH*VPRCTQ
Trigger: CTGTGTACACCGTGGCACCAAATGTTCAGAGAATCC...GCCATCTCTTAAAGTTTGTATGCTCTTCTGCTTTTGTACAGAGGTTTGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp AAATATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCA +
Preference number: 5 (lower is better)
Translates to: KYFSVLFDNILLHLQVLHSVPLR*FIACTA
Trigger: TGCTGTGCATGCTATGAACAACCTCAACGGCACAGA...GTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS-3UTR CAA 90 bp ATTTCAGTGTGCTATTTGATAACATTCTTCTTCACCTGCAGGTTTTGCACGTGTTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ISVCYLITFFFTCRFCTCLMATG*TGEISK
Trigger: TTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAA...ACACGTGCAAAACCTGCAGGTGAAGAAGAATGTTATCAAATAGCACACTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 72 bp GCGGGCCCTCCCAGCCGGGCGGGGGTCCACCGTACTTaGGCTGCCCGTTCTCTTGTACCATGGTGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: AGPPSRAGVHRT*AARSLVPWCSR
Trigger: CCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCCGCCCGGCTGGGAGGGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS GCA 72 bp CATGGTGTAGCCGGTGCGCTCTATCAGTGCCAACAGTaGAGCCTCATTGGGCGCGCCCGCCACACCCTCCGG +
Preference number: 6 (lower is better)
Translates to: HGVAGALYQCQQ*SLIGRARHTLR
Trigger: CCGGAGGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp AGCGGAATATCCTCCGAGGTAGGAACCCCTGGGCCCTaGGGTCCTGTTTCCAGCTGCGCCTCTCCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SGISSEVGTPGP*GPVSSCASPSA
Trigger: GGCCGAGGGAGAGGCGCAGCTGGAAACAGGACCCCAGGGCCCAGGGGTTCCTACCTCGGAGGATATTCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 72 bp CAATCTGGTGGCCCCACAGTTGGATCCGACCCGGCATaGGCTTGCGGCGTGCCATGGCTGCAGCACGATGGC +
Preference number: 6 (lower is better)
Translates to: QSGGPTVGSDPA*ACGVPWLQHDG
Trigger: GCCATCGTGCTGCAGCCATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp CATTGGGCGCGCCCGCCACACCCTCCGGTACCTTGGTaGAGGACCCCACTGTTGGATCGCTGTTCATGGCTG +
Preference number: 6 (lower is better)
Translates to: HWARPPHPPVPW*RTPLLDRCSWL
Trigger: CAGCCATGAACAGCGATCCAACAGTGGGGTCCTCCACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp CCTCATTGGGCGCGCCCGCCACACCCTCCGGTACCTTaGTGGAGGACCCCACTGTTGGATCGCTGTTCATGG +
Preference number: 6 (lower is better)
Translates to: PHWARPPHPPVP*WRTPLLDRCSW
Trigger: CCATGAACAGCGATCCAACAGTGGGGTCCTCCACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp TCGGCCCAGTCCACAGCAATCTGGTGGCCCCACAGTTaGATCCGACCCGGCATGAGCTTGCGGCGTGCCATG +
Preference number: 6 (lower is better)
Translates to: SAQSTAIWWPHS*IRPGMSLRRAM
Trigger: CATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp CGGCAGCCGCGGCGTTCTTCTGTAGTGTGGCGATTGTaGCAGTGGCGGGAGCAGCAAAGGGGACGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: RQPRRSSVVWRL*QWREQQRGRSW
Trigger: CCAGCTACGTCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCACACTACAGAAGAACGCCGCGGCTGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp GCCTCATTGGGCGCGCCCGCCACACCCTCCGGTACCTaGGTGGAGGACCCCACTGTTGGATCGCTGTTCATG +
Preference number: 6 (lower is better)
Translates to: ASLGAPATPSGT*VEDPTVGSLFM
Trigger: CATGAACAGCGATCCAACAGTGGGGTCCTCCACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CAA 72 bp TGGTGGCCCCACAGTTGGATCCGACCCGGCATGAGCTaGCGGCGTGCCATGGCTGCAGCACGATGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: WWPHSWIRPGMS*RRAMAAARWLS
Trigger: TGAGAGCCATCGTGCTGCAGCCATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp CTCGGCCCAGTCCACAGCAATCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAGCTTGCGGCGTGCCAT +
Preference number: 6 (lower is better)
Translates to: LGPVHSNLVAPQ*DPTRHELAACH
Trigger: ATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp AACAGTGCAGCCTCATTGGGCGCGCCCGCCACACCCTCCGGTACCTaGGTGGAGGACCCCACTGTTGGATCGCTGTTCATGGCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: NSAASLGAPATPSGT*VEDPTVGSLFMAVA
Trigger: CGCCACAGCCATGAACAGCGATCCAACAGTGGGGTCCTCCACCAAGGTACCGGAGGGTGTGGCGGGCGCGCCCAATGAGGCTGCACTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CAA 90 bp CTCCCAGCCGGGCGGGGGTCCACCGTACTTGCGCTGCCCGTTCTCTaGTACCATGGTGTAGCCGGTGCGCTCTATCAGTGCCAACAGTGC +
Preference number: 6 (lower is better)
Translates to: LPAGRGSTVLALPVL*YHGVAGALYQCQQC
Trigger: GCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCCGCCCGGCTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CAA 90 bp AATCTCTGGCTCGGCCCAGTCCACAGCAATCTGGTGGCCCCACAGTaGGATCCGACCCGGCATGAGCTTGCGGCGTGCCATGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: NLWLGPVHSNLVAPQ*DPTRHELAACHGCS
Trigger: GCTGCAGCCATGGCACGCCGCAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGAGCCAGAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp AGGCCAACGTGTAGGGGTCACAGGAGTACACGTAGCTaGGTTGCTGCGCTACGGCCTCAGCCGAGCCACCAC +
Preference number: 6 (lower is better)
Translates to: RPTCRGHRSTRS*VAALRPQPSHH
Trigger: GTGGTGGCTCGGCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCTGTGACCCCTACACGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp CCCCATACACGGCAGCCGCGGCGTTCTTCTGTAGTGTaGCGATTGTGGCAGTGGCGGGAGCAGCAAAGGGGA +
Preference number: 6 (lower is better)
Translates to: PHTRQPRRSSVV*RLWQWREQQRG
Trigger: TCCCCTTTGCTGCTCCCGCCACTGCCACAATCGCCACACTACAGAAGAACGCCGCGGCTGCCGTGTATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp GGGCGGGGGTCCACCGTACTTGCGCTGCCCGTTCTCTaGTACCATGGTGTAGCCGGTGCGCTCTATCAGTGC +
Preference number: 6 (lower is better)
Translates to: GRGSTVLALPVL*YHGVAGALYQC
Trigger: GCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGGACCCCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CAA 72 bp CAACGTGTAGGGGTCACAGGAGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGCCGAGCCACCACCACC +
Preference number: 6 (lower is better)
Translates to: QRVGVTGVHVAG*LRYGLSRATTT
Trigger: GGTGGTGGTGGCTCGGCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCTGTGACCCCTACACGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp GTAGTAGGCCAACGTGTAGGGGTCACAGGAGTACACGTAGCTGGGTaGCTGCGCTACGGCCTCAGCCGAGCCACCACCACCCTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: VVGQRVGVTGVHVAG*LRYGLSRATTTLGC
Trigger: GCAGCCAAGGGTGGTGGTGGCTCGGCTGAGGCCGTAGCGCAGCAACCCAGCTACGTGTACTCCTGTGACCCCTACACGTTGGCCTACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp CCGCGCTTCTTCATCTTGGGGATGCCACCAATGAAGAGGCGGCAGTaGTCCACACTACAGCACACACCCAGCAGACGGCCGGGGCGGATC +
Preference number: 6 (lower is better)
Translates to: PRFFILGMPPMKRRQ*STLQHTPSRRPGRI
Trigger: GATCCGCCCCGGCCGTCTGCTGGGTGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCATTGGTGGCATCCCCAAGATGAAGAAGCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 72 bp CACCCAGCAGACGGCCGGGGCGGATCTCGTAGTTGTTaGGTTCCCGAACGGCTCGCTTGGCCTCATGCTTGT +
Preference number: 6 (lower is better)
Translates to: HPADGRGGSRSC*VPERLAWPHAC
Trigger: ACAAGCATGAGGCCAAGCGAGCCGTTCGGGAACTCAACAACTACGAGATCCGCCCCGGCCGTCTGCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS GCA 72 bp CTCTTGTACCATGGTGTAGCCGGTGCGCTCTATCAGTaGCAACAGTGCAGCCTCATTGGGCGCGCCCGCCAC +
Preference number: 6 (lower is better)
Translates to: LLYHGVAGALYQ*QQCSLIGRARH
Trigger: GTGGCGGGCGCGCCCAATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp ACGTCAATCTCTGGCTCGGCCCAGTCCACAGCAATCTaGTGGCCCCACAGTTGGATCCGACCCGGCATGAGC +
Preference number: 6 (lower is better)
Translates to: TSISGSAQSTAI*WPHSWIRPGMS
Trigger: GCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGAGCCAGAGATTGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp TCAATCTCTGGCTCGGCCCAGTCCACAGCAATCTGGTaGCCCCACAGTTGGATCCGACCCGGCATGAGCTTG +
Preference number: 6 (lower is better)
Translates to: SISGSAQSTAIW*PHSWIRPGMSL
Trigger: CAAGCTCATGCCGGGTCGGATCCAACTGTGGGGCCACCAGATTGCTGTGGACTGGGCCGAGCCAGAGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 72 bp GGGAGTACTGTTCCTTGTCCACGGGCTTGGCCAGCGTaGCTTCTAAGCAGGATCCCTCCAGCTCTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: GSTVPCPRAWPA*LLSRIPPALCR
Trigger: ACGGCACAGAGCTGGAGGGATCCTGCTTAGAAGTCACGCTGGCCAAGCCCGTGGACAAGGAACAGTACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 72 bp TGTTTCCAGCTGCGCCTCTCCCTCGGCCTCTTATGCTaGCTGTTTTCACGAAGTAGTCCCGGTTGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: CFQLRLSLGLLC*LFSRSSPGWAR
Trigger: TCGGGCCCAACCGGGACTACTTCGTGAAAACAGGCAGCATAAGAGGCCGAGGGAGAGGCGCAGCTGGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 72 bp TCCTGTTTCCAGCTGCGCCTCTCCCTCGGCCTCTTATaGTGCCTGTTTTCACGAAGTAGTCCCGGTTGGGCC +
Preference number: 6 (lower is better)
Translates to: SCFQLRLSLGLL*CLFSRSSPGWA
Trigger: GGCCCAACCGGGACTACTTCGTGAAAACAGGCAGCATAAGAGGCCGAGGGAGAGGCGCAGCTGGAAACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp GGTGTACACAGGAGTTATTGGACGGCCCTGGAAAGGTaGCGGTGTGGATACCGCAGGAATGACGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GVHRSYWTALER*RCGYRRNDGSS
Trigger: GCTGCTGCCGTCATTCCTGCGGTATCCACACCGCCACCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp GGTGCCACGGTGTACACAGGAGTTATTGGACGGCCCTaGAAAGGTGGCGGTGTGGATACCGCAGGAATGACG +
Preference number: 6 (lower is better)
Translates to: GATVYTGVIGRP*KGGGVDTAGMT
Trigger: CGTCATTCCTGCGGTATCCACACCGCCACCTTTCCAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp CAAAGGGGACGTAGCTGGCCCCGTAGATGCCGGCGGTaGGGATTCTCTGAACATTTGGTGCCACGGTGTACA +
Preference number: 6 (lower is better)
Translates to: QRGRSWPRRCRR*GFSEHLVPRCT
Trigger: TGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCTACGTCCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp CGTAGCTGGCCCCGTAGATGCCGGCGGTGGGGATTCTCTGAACATTaGGTGCCACGGTGTACACAGGAGTTATTGGACGGCCCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: RSWPRRCRRWGFSEH*VPRCTQELLDGPGK
Trigger: CTTTCCAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGGGCCAGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 72 bp TGCCTGTTTTCACGAAGTAGTCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGCCGTAGTAGGCCAACG +
Preference number: 6 (lower is better)
Translates to: CLFSRSSPGWAR*ERCRGSRSRPT
Trigger: CGTTGGCCTACTACGGCTACCCCTACAACGCTCTCATCGGGCCCAACCGGGACTACTTCGTGAAAACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 72 bp TGGCCATTTTCACGAAGTAGTCCCGGTTGGGCCCGATaGGAGCGTTGTAGGGGTAGCCGTAGTAGGCCAACG +
Preference number: 6 (lower is better)
Translates to: WPFSRSSPGWAR*ERCRGSRSRPT
Trigger: CGTTGGCCTACTACGGCTACCCCTACAACGCTCTCATCGGGCCCAACCGGGACTACTTCGTGAAAATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094756.11
CDS GCA 72 bp TGCGCTGCCCGTTCTCTTGTACCATGGTGTAGCCGGTaGGCTCTATCAGTGCCAACAGTGCAGCCTCATTGG +
Preference number: 6 (lower is better)
Translates to: CAARSLVPWCSR*ALSVPTVQPHW
Trigger: CCAATGAGGCTGCACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp GTCCACCGTACTTGCGCTGCCCGTTCTCTTGTACCATaGTGTAGCCGGTGCGCTCTATCAGTGCCAACAGTG +
Preference number: 6 (lower is better)
Translates to: VHRTCAARSLVP*CSRCALSVPTV
Trigger: CACTGTTGGCACTGATAGAGCGCACCGGCTACACCATGGTACAAGAGAACGGGCAGCGCAAGTACGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp CCCGTAGATGCCGGCGGTGGGGATTCTCTGAACATTTaGTGCCACGGTGTACACAGGAGTTATTGGACGGCC +
Preference number: 6 (lower is better)
Translates to: PVDAGGGDSLNI*CHGVHRSYWTA
Trigger: GGCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp CCTGGAACATGGAGTACTGAGCACCGATGGCAGGGATaGCCATTTTCACGAAGTAGTCCCGGTTGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: PGTWSTEHRWQG*PFSRSSPGWAR
Trigger: TCGGGCCCAACCGGGACTACTTCGTGAAAATGGCCATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094756.11
CDS CCA 72 bp CTGGGGCTGCCTGGAACATGGAGTACTGAGCACCGATaGCAGGGATGGCCATTTTCACGAAGTAGTCCCGGT +
Preference number: 6 (lower is better)
Translates to: LGLPGTWSTEHR*QGWPFSRSSPG
Trigger: ACCGGGACTACTTCGTGAAAATGGCCATCCCTGCCATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094756.11
CDS CAA 72 bp TTCATCTTGGGGATGCCACCAATGAAGAGGCGGCAGTaGTCCACACTACAGCACACACCCAGCAGACGGCCG +
Preference number: 6 (lower is better)
Translates to: FILGMPPMKRRQ*STLQHTPSRRP
Trigger: CGGCCGTCTGCTGGGTGTGTGCTGTAGTGTGGACAACTGCCGCCTCTTCATTGGTGGCATCCCCAAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp CCCCGTAGATGCCGGCGGTGGGGATTCTCTGAACATTaGGTGCCACGGTGTACACAGGAGTTATTGGACGGC +
Preference number: 6 (lower is better)
Translates to: PRRCRRWGFSEH*VPRCTQELLDG
Trigger: GCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS GCA 72 bp GTAGATGCCGGCGGTGGGGATTCTCTGAACATTTGGTaGCACGGTGTACACAGGAGTTATTGGACGGCCCTG +
Preference number: 6 (lower is better)
Translates to: VDAGGGDSLNIW*HGVHRSYWTAL
Trigger: CAGGGCCGTCCAATAACTCCTGTGTACACCGTGGCACCAAATGTTCAGAGAATCCCCACCGCCGGCATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp CCTCGGTTTTTCATCTTGTCTGCCGCACTGGCATACACAATCACGTaGAGTACGCCCTCGGTGACCTTGGCGATCTCCTCCAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: PRFFILSAALAYTIT*STPSVTLAISSRIS
Trigger: GGAGATCCTGGAGGAGATCGCCAAGGTCACCGAGGGCGTACTCAACGTGATTGTGTATGCCAGTGCGGCAGACAAGATGAAAAACCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp TTCATCTTGTCTGCCGCACTGGCATACACAATCACGTaGAGTACGCCCTCGGTGACCTTGGCGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: FILSAALAYTIT*STPSVTLAISS
Trigger: GGAGGAGATCGCCAAGGTCACCGAGGGCGTACTCAACGTGATTGTGTATGCCAGTGCGGCAGACAAGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp TCCACGCAGCCTGGGTTGAACTGGCCAAAGCTCTTCTaGATGGTCTCCTCGGTGGTCTCGATCATGAGGTTG +
Preference number: 6 (lower is better)
Translates to: STQPGLNWPKLF*MVSSVVSIMRL
Trigger: CAACCTCATGATCGAGACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp AGCGTGACTTCTAAGCAGGATCCCTCCAGCTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCATCCTCACGGCTAGTGAAGTGCACG +
Preference number: 6 (lower is better)
Translates to: SVTSKQDPSSSVPLR*FIACTASSRLVKCT
Trigger: CGTGCACTTCACTAGCCGTGAGGATGCTGTGCATGCTATGAACAACCTCAACGGCACAGAGCTGGAGGGATCCTGCTTAGAAGTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp TTGGCCAGCGTGACTTCTAAGCAGGATCCCTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGCACAGCATCCTCACGGCTAGTGAAG +
Preference number: 6 (lower is better)
Translates to: LASVTSKQDPSSSVP*RLFIACTASSRLVK
Trigger: CTTCACTAGCCGTGAGGATGCTGTGCATGCTATGAACAACCTCAACGGCACAGAGCTGGAGGGATCCTGCTTAGAAGTCACGCTGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp ATCTTCTTGACCCTTTCCACGCAGCCTGGGTTGAACTaGCCAAAGCTCTTCTTGATGGTCTCCTCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: IFLTLSTQPGLN*PKLFLMVSSVV
Trigger: GACCACCGAGGAGACCATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGGGTCAAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp TCACGGATCTTCTTGACCCTTTCCACGCAGCCTGGGTaGAACTGGCCAAAGCTCTTCTTGATGGTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SRIFLTLSTQPG*NWPKLFLMVSS
Trigger: CGAGGAGACCATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp TCTAAGCAGGATCCCTCCAGCTCTGTGCCGTTGAGGTaGTTCATAGCATGCACAGCATCCTCACGGCTAGTG +
Preference number: 6 (lower is better)
Translates to: SKQDPSSSVPLR*FIACTASSRLV
Trigger: CACTAGCCGTGAGGATGCTGTGCATGCTATGAACAACCTCAACGGCACAGAGCTGGAGGGATCCTGCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp GTGACTTCTAAGCAGGATCCCTCCAGCTCTGTGCCGTaGAGGTTGTTCATAGCATGCACAGCATCCTCACGG +
Preference number: 6 (lower is better)
Translates to: VTSKQDPSSSVP*RLFIACTASSR
Trigger: CCGTGAGGATGCTGTGCATGCTATGAACAACCTCAACGGCACAGAGCTGGAGGGATCCTGCTTAGAAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS TCA 72 bp AGGCATAGCCGCGGTTCTTGCCATCGAAATCCATCATaGGTCGCAGCTCATAGATGCGACCTACGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: RHSRGSCHRNPS*VAAHRCDLRSQ
Trigger: TTGAGACCGTAGGTCGCATCTATGAGCTGCGACTCATGATGGATTTCGATGGCAAGAACCGCGGCTATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000200852.4
ENSMUST00000201544.4
CDS CCA 72 bp GTAGTCACGGATCTTCTTGACCCTTTCCACGCAGCCTaGGTTGAACTGGCCAAAGCTCTTCTTGATGGTCTC +
Preference number: 6 (lower is better)
Translates to: VVTDLLDPFHAA*VELAKALLDGL
Trigger: GAGACCATCAAGAAGAGCTTTGGCCAGTTCAACCCAGGCTGCGTGGAAAGGGTCAAGAAGATCCGTGACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp GGCAGGGATGGCCACTGTGCCAGGTTTAATGGCAACTaGATTGACAGGAGAGATCTCCAAATTCGGCACAAG +
Preference number: 6 (lower is better)
Translates to: GRDGHCARFNGN*IDRRDLQIRHK
Trigger: CTTGTGCCGAATTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAAACCTGGCACAGTGGCCATCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CCA 72 bp TGTGTGGATCTTGCCATCTTCGATTATTTTCGGGGCTaGGGCTGCCTGGAACATGGAGTACTGAGCACCGAT +
Preference number: 6 (lower is better)
Translates to: CVDLAIFDYFRG*GCLEHGVLSTD
Trigger: ATCGGTGCTCAGTACTCCATGTTCCAGGCAGCCCCAGCCCCGAAAATAATCGAAGATGGCAAGATCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094756.11
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 90 bp CCGATGGCAGGGATGGCCACTGTGCCAGGTTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAATTCGGCACAAGTTCATATCCTTTC +
Preference number: 6 (lower is better)
Translates to: PMAGMATVPGLMATG*TGEISKFGTSSYPF
Trigger: GAAAGGATATGAACTTGTGCCGAATTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAAACCTGGCACAGTGGCCATCCCTGCCATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4
CDS CAA 72 bp GGGATGGCCACTGTGCCAGGTTTAATGGCAACTGGATaGACAGGAGAGATCTCCAAATTCGGCACAAGTTCA +
Preference number: 6 (lower is better)
Translates to: GMATVPGLMATG*TGEISKFGTSS
Trigger: TGAACTTGTGCCGAATTTGGAGATCTCTCCTGTCAATCCAGTTGCCATTAAACCTGGCACAGTGGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000094757.9
ENSMUST00000113724.6
ENSMUST00000113726.8
ENSMUST00000167950.8
ENSMUST00000200775.4
ENSMUST00000201544.4