Pregenerated sensors for RBM41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031433Ensembl transcript IDs: ENSMUST00000033810.8, ENSMUST00000087400.12, ENSMUST00000113007.8, ENSMUST00000113011.9
Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTaGAAGAGCAGTAAGTACTCTTATGCACTGAGCCATCTCTCCCGC | + |
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Preference number: 1 (lower is better) Translates to: LGTISVDAEDQTQVL*KSSKYSYALSHLSR Trigger: GCGGGAGAGATGGCTCAGTGCATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR GCA 90 bp | CCAGCATCCAGTGCTGAAACTGGCTACTTCCTTGTTTATCAACTGTaGAGCAGTACTTGTATTAGGAAGGAGACACTGAGTACCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: PASSAETGYFLVYQL*SSTCIRKETLSTHQ Trigger: CTGGTGGGTACTCAGTGTCTCCTTCCTAATACAAGTACTGCTGCACAGTTGATAAACAAGGAAGTAGCCAGTTTCAGCACTGGATGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR GCA 90 bp | TACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAATCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: YFLGWRDDSEVKSTD*SSRGPEFNSQQSHG Trigger: ACCATGTGATTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CCA 90 bp | CCTATTATTGGCAGGTCTGAGGGTTTGAACTCAGGTCTTCCTGTTTaGTGGCAAATGCCTTTACTCACTGAGCCATTTCACTCGACCTTT | + |
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Preference number: 1 (lower is better) Translates to: PIIGRSEGLNSGLPV*WQMPLLTEPFHSTF Trigger: AAAGGTCGAGTGAAATGGCTCAGTGAGTAAAGGCATTTGCCACCAAACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCCAATAATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CCA 90 bp | AGTTCAATTCCCAGCAATCACATGGTGGTTCACAACCATCTATACTaGGATCAAATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACACT | + |
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Preference number: 1 (lower is better) Translates to: SSIPSNHMVVHNHLY*DQMPSSGVSEDSYT Trigger: AGTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCACCATGTGATTGCTGGGAATTGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CCA 90 bp | ATTATTGGCAGGTCTGAGGGTTTGAACTCAGGTCTTCCTGTTTGGTaGCAAATGCCTTTACTCACTGAGCCATTTCACTCGACCTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: IIGRSEGLNSGLPVW*QMPLLTEPFHSTFC Trigger: ACAAAAGGTCGAGTGAAATGGCTCAGTGAGTAAAGGCATTTGCCACCAAACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCCAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR TCA 90 bp | TTGTTTATCAACTGTGCAGCAGTACTTGTATTAGGAAGGAGACACTaGGTACCCACCAGTTTGGAGATGTGCCTGTTTCTCCTTTCATTC | + |
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Preference number: 1 (lower is better) Translates to: LFINCAAVLVLGRRH*VPTSLEMCLFLLSF Trigger: GAATGAAAGGAGAAACAGGCACATCTCCAAACTGGTGGGTACTCAGTGTCTCCTTCCTAATACAAGTACTGCTGCACAGTTGATAAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CCA 90 bp | AATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTaGGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: NRLISKHIPYIDKGS*EPSVWMLRIKLRSS Trigger: AGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR GCA 90 bp | AGTGGATCTTTATCTCTAGCATTTTTGTTTCCCTTTCCTCAGCCATaGGAACTCTTTCAACACACTGTAGGGCTAACAGAACAGTACAAC | + |
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Preference number: 1 (lower is better) Translates to: SGSLSLAFLFPFPQP*ELFQHTVGLTEQYN Trigger: GTTGTACTGTTCTGTTAGCCCTACAGTGTGTTGAAAGAGTTCGCATGGCTGAGGAAAGGGAAACAAAAATGCTAGAGATAAAGATCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR TCA 90 bp | AAGCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTaGGAACATTACAAACATTTCTGTGGTTTTTGTAGACAAGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: KLMLFHSCPGRSSQK*EHYKHFCGFCRQGL Trigger: AAGACCTTGTCTACAAAAACCACAGAAATGTTTGTAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| 3UTR TCA 90 bp | TTGGTACTGATGTGTAACCTTCTTCCATGTGGAAGAGAACATGTTTaGCAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LVLMCNLLPCGREHV*QDFSPFVFIKACFV Trigger: CACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTCAAACATGTTCTCTTCCACATGGAAGAAGGTTACACATCAGTACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR TCA 90 bp | ATCACTAATTTTCACTTATCTGTGAGTTTCCCGATTTATTGGTACTaGTGTGTAACCTTCTTCCATGTGGAAGAGAACATGTTTGACAAG | + |
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Preference number: 1 (lower is better) Translates to: ITNFHLSVSFPIYWY*CVTFFHVEENMFDK Trigger: CTTGTCAAACATGTTCTCTTCCACATGGAAGAAGGTTACACATCAGTACCAATAAATCGGGAAACTCACAGATAAGTGAAAATTAGTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGCTCTTCTGGTGTGTCTaGAGACAGCTACACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: GGEMTQRLRALTALPEVLLFWCV*RQLHCT Trigger: AGTACAGTGTAGCTGTCTTCAGACACACCAGAAGAG...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTCTCTTCTGGTGTGTCTaGAGACAGCTACACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: GTISVDAEDQTQVLCKSSLFWCV*RQLHCT Trigger: AGTACAGTGTAGCTGTCTTCAGACACACCAGAAGAG...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCCTCTTCCAGAGGTCCTaGGTTCAATTCCCAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTLFQRS*VQFPAI Trigger: GATTGCTGGGAATTGAACTCAGGACCTCTGGAAGAG...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGCTCTTCCAGAGGTCCTaGGTTCAATTCCCAGCAATC | + |
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Preference number: 2 (lower is better) Translates to: WMLRIKLRSSARAVSTLMLFQRS*VQFPAI Trigger: GATTGCTGGGAATTGAACTCAGGACCTCTGGAAGAG...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR GCA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTACCAGTTTGGAGATGTaGCTGTTTCTCCTTTCATTC | + |
|
Preference number: 2 (lower is better) Translates to: GTISVDAEDQTQVLCKSSTSLEM*LFLLSF Trigger: GAATGAAAGGAGAAACAGGCACATCTCCAAACTGGT...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGACTCTTCTGGTGTGTCTaGAGACAGCTACACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRLFWCV*RQLHCT Trigger: AGTACAGTGTAGCTGTCTTCAGACACACCAGAAGAG...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCGGTCTTCCTGTTTGGTaGCAAATGCCTTTACTCACT | + |
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Preference number: 2 (lower is better) Translates to: SRAVFQIYPASSAETGYFGLPVW*QMPLLT Trigger: AGTGAGTAAAGGCATTTGCCACCAAACAGGAAGACC...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCTCAGGTCTTCCTGTTTaGTGGCAAATGCCTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: SRAVFQIYPASSAETGYFSGLPV*WQMPLL Trigger: GAGTAAAGGCATTTGCCACCAAACAGGAAGACCTGA...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGTCAGGTCTTCCTGTTTaGTGGCAAATGCCTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLSGLPV*WQMPLL Trigger: GAGTAAAGGCATTTGCCACCAAACAGGAAGACCTGA...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CAA 90 bp | ATTATTTCCCAGCCTTTTTGTCCTATTATTGGCAGGTCTGAGGGTTaGAACTCAGGTCTTCCTGTTTGGTGGCAAATGCCTTTACTCACT | + |
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Preference number: 2 (lower is better) Translates to: IISQPFCPIIGRSEG*NSGLPVWWQMPLLT Trigger: AGTGAGTAAAGGCATTTGCCACCAAACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCCAATAATAGGACAAAAAGGCTGGGAAATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CAA 90 bp | GGTTCTTCTTCTTCTTCAACAACTATAAACGAATCACTAGGGAATTaGAGGCAGGCTGCCTTTCCTCTAAAGAACTTTCTTTCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSSSSSTTINESLGN*RQAAFPLKNFLSCP Trigger: GGGACAGGAAAGAAAGTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGTTGTTGAAGAAGAAGAAGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CAA 90 bp | AGAACAGAATGGAGGGGAGAGGAGAAAGCTTATGTTGTTCCATTCTaGTCCAGGTCGGTCATCACAGAAGTGAGAACATTACAAACATTT | + |
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Preference number: 2 (lower is better) Translates to: RTEWRGEEKAYVVPF*SRSVITEVRTLQTF Trigger: AAATGTTTGTAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGCTTTCTCCTCTCCCCTCCATTCTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| 3UTR-3UTR TCA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGTTAGGAAGGAGACACTaGGTACCCACCAGTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLNRLISKHIPYIDKGSWLGRRH*VPTSLE Trigger: CTCCAAACTGGTGGGTACTCAGTGTCTCCTTCCTAA...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CCA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGGAGTACCCACCAGTTTaGAGATGTGCCTGTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLNRLISKHIPYIDKGSWEYPPV*RCACFS Trigger: GGAGAAACAGGCACATCTCCAAACTGGTGGGTACTC...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCATTAGGAAGGAGACACTaGGTACCCACCAGTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSLGRRH*VPTSLE Trigger: CTCCAAACTGGTGGGTACTCAGTGTCTCCTTCCTAA...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGTTGTGGTTCAGTTCATaGTCTAGCCTAAAGATGTTT | + |
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Preference number: 2 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLLWFSS*SSLKMF Trigger: AAACATCTTTAGGCTAGATCATGAACTGAACCACAA...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR GCA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCGCATCAAAGCCTACCTaGCTCTTGCTCCTGGATGTT | + |
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Preference number: 2 (lower is better) Translates to: HNNKNESITDFYNSTEKCASKPT*LLLLDV Trigger: AACATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGC...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| 3UTR-3UTR TCA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCATATTATTGGCAGGTCTaGGGGTTTGAACTCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSYYWQV*GFELRS Trigger: AGACCTGAGTTCAAACCCTCAGACCTGCCAATAATA...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCTCCTGGATGTTGAGATTACAGGCTTGGGATTATACATCTGAATACCCTGTGGCACGTTTTAATTaGAGACCAATGTTTATAGTT | + |
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Preference number: 2 (lower is better) Translates to: SCSWMLRLQAWDYTSEYPVARFN*RPMFIV Trigger: AACTATAAACATTGGTCTCCAATTAAAACGTGCCAC...AGGGTATTCAGATGTATAATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| 3UTR-3UTR TCA 90 bp | AACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCCGGTCATCACAGAAGTaGGAACATTACAAACATTTC | + |
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Preference number: 2 (lower is better) Translates to: NNKNESITDFYNSTEKCLRSSQK*EHYKHF Trigger: GAAATGTTTGTAATGTTCTCACTTCTGTGATGACCG...GAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| 3UTR-3UTR CCA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCAAAATACTTTTTAGGGTaGAGAGATGACTCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSKYFLG*RDDSEV Trigger: AACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR GCA 72 bp | GGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDDSEVKSTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CAA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCGGCAGGTCTGAGGGTTaGAACTCAGGTCTTCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SRAVFQIYPASSAETGYFGRSEG*NSGLPV Trigger: AACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCC...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR CCA 72 bp | CCCAGCAATCACATGGTGGTTCACAACCATCTATACTaGGATCAAATGCCCTCTTCTGGTGTGTCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PSNHMVVHNHLY*DQMPSSGVSED Trigger: GTCTTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCACCATGTGATTGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGGAATCACTAGGGAATTaGAGGCAGGCTGCCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLESLGN*RQAAFP Trigger: AGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTC...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR GCA 72 bp | ACATGGTGGTTCACAACCATCTATACTGGGATCAAATaGCCTCTTCTGGTGTGTCTGAAGACAGCTACACTG | + |
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Preference number: 3 (lower is better) Translates to: TWWFTTIYTGIK*PLLVCLKTATL Trigger: CAGTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCACCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR GCA 72 bp | ATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTaGAAGAGCAGTAAGTACTCTTATGCACTGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: ISVDAEDQTQVL*KSSKYSYALSH Trigger: ATGGCTCAGTGCATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGCTCAGGTCTTCCTGTTaGGTGGCAAATGCCTTTACT | + |
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Preference number: 3 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLLRSSC*VANAFT Trigger: AGTAAAGGCATTTGCCACCAAACAGGAAGACCTGAG...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR TCA 72 bp | AGCCTTTTTGTCCTATTATTGGCAGGTCTGAGGGTTTaGACTCAGGTCTTCCTGTTTGGTGGCAAATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: SLFVLLLAGLRV*TQVFLFGGKCL Trigger: AAGGCATTTGCCACCAAACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCCAATAATAGGACAAAAAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR TCA 72 bp | TATTTCCCAGCCTTTTTGTCCTATTATTGGCAGGTCTaGGGGTTTGAACTCAGGTCTTCCTGTTTGGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: YFPAFLSYYWQV*GFELRSSCLVA Trigger: TGCCACCAAACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCCAATAATAGGACAAAAAGGCTGGGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| 3UTR TCA 72 bp | AGCATCAAAGCCTACCTGCCTCTTGCTCCTGGATGTTaGGATTACAGGCTTGGGATTATACATCTGAATACC | + |
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Preference number: 3 (lower is better) Translates to: SIKAYLPLAPGC*DYRLGIIHLNT Trigger: GGTATTCAGATGTATAATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| 3UTR-3UTR CAA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATGGCAGGTCTGAGGGTTaGAACTCAGGTCTTCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VTRSFFSLNRLISKHIPYGRSEG*NSGLPV Trigger: AACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCC...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCTTATCTCTAGCATTTTaGTTTCCCTTTCCTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRAVFQIYPASSAETGYFLSLAF*FPFPQP Trigger: TGGCTGAGGAAAGGGAAACAAAAATGCTAGAGATAA...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR CCA 72 bp | ATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTaGGAACCATCAGTGTGGATGCTGAGGATCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ISKHIPYIDKGS*EPSVWMLRIKL Trigger: GAGTTTGATCCTCAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATGAATCACTAGGGAATTaGAGGCAGGCTGCCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VTRSFFSLNRLISKHIPYESLGN*RQAAFP Trigger: AGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTC...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTAGTCACAATGGAATGCATACAACAGATTACAAGTGTGAAAGTTGGAACTCTTGCTCCTGGATGTaGAGATTACAGGCTTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GSSHNGMHTTDYKCESWNSCSWM*RLQAWD Trigger: ATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGA...GTTCCAACTTTCACACTTGTAATCTGTTGTATGCATTCCATTGTGACTACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| 3UTR GCA 72 bp | AACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTaGCTTTCCTCTAAAGAACTTTCTTTCCTGTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NYKRITREFEAG*LSSKELSFLSL Trigger: AAGGGACAGGAAAGAAAGTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR GCA 72 bp | TTATCTCTAGCATTTTTGTTTCCCTTTCCTCAGCCATaGGAACTCTTTCAACACACTGTAGGGCTAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLAFLFPFPQP*ELFQHTVGLTE Trigger: TTCTGTTAGCCCTACAGTGTGTTGAAAGAGTTCGCATGGCTGAGGAAAGGGAAACAAAAATGCTAGAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCTTTGTAGACAAGGTCTaGTTGTGCAGCACAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HNNKNESITDFYNSTEKCFVDKV*LCSTGW Trigger: CCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAA...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| 3UTR TCA 72 bp | TCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTaGAGACAGCTACACTGTACTCACATACATAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SILGSNALFWCV*RQLHCTHIHKI Trigger: TATTTTATGTATGTGAGTACAGTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR TCA 72 bp | TTGGGATCTTTAGGAACAGTCCTATGTAATGTATCCTaGGAATTAAAGGTTTTCACATGGTCTTACCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGSLGTVLCNVS*ELKVFTWSYPS Trigger: TGAGGGGTAAGACCATGTGAAAACCTTTAATTCTCAGGATACATTACATAGGACTGTTCCTAAAGATCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR TCA 72 bp | TTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTaGGAACATTACAAACATTTCTGTGGTTTTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFHSCPGRSSQK*EHYKHFCGFCR Trigger: TCTACAAAAACCACAGAAATGTTTGTAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| 3UTR TCA 72 bp | TTTCACTTATCTGTGAGTTTCCCGATTTATTGGTACTaGTGTGTAACCTTCTTCCATGTGGAAGAGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: FHLSVSFPIYWY*CVTFFHVEENM Trigger: CATGTTCTCTTCCACATGGAAGAAGGTTACACATCAGTACCAATAAATCGGGAAACTCACAGATAAGTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR GCA 72 bp | AAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATaGATACAACAGATTACAAGTGTGAAAGTTGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: KTMVGKEVVTME*IQQITSVKVGT Trigger: GGTTCCAACTTTCACACTTGTAATCTGTTGTATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGTTATCTCTAGCATTTTaGTTTCCCTTTCCTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLNRLISKHIPYIDKGSWLSLAF*FPFPQP Trigger: TGGCTGAGGAAAGGGAAACAAAAATGCTAGAGATAA...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR TCA 72 bp | ATGTGTAACCTTCTTCCATGTGGAAGAGAACATGTTTaGCAAGACTTTAGTCCATTTGTATTTATTAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MCNLLPCGREHV*QDFSPFVFIKA Trigger: GGCCTTAATAAATACAAATGGACTAAAGTCTTGTCAAACATGTTCTCTTCCACATGGAAGAAGGTTACACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR CCA 72 bp | AATGGAATGCATACAACAGATTACAAGTGTGAAAGTTaGAACCTATATAAACCAGAATTAGATCGTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NGMHTTDYKCES*NLYKPELDRLG Trigger: CCCTAAACGATCTAATTCTGGTTTATATAGGTTCCAACTTTCACACTTGTAATCTGTTGTATGCATTCCATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGTTGCCACATGGAGCCTaGGGCCTTTACCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLLPHGA*GLYPVL Trigger: CAGCACAGGGTAAAGGCCCCAGGCTCCATGTGGCAA...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCCTTGTCCTGGAGGAGTaGTGGCTTCTCAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTLVLEE*WLLSCA Trigger: GGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAG...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTGGCAGGCAAAGGATaGGCTGGCGCTCTGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTVAGKG*AGALRF Trigger: GAATCTCAGAGCGCCAGCGCATCCTTTGCCTGCCAC...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGATAAGCTTTGCCACATaGAGCCTGGGGCCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLISFAT*SLGPLP Trigger: GGGTAAAGGCCCCAGGCTCCATGTGGCAAAGCTTAT...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTTGAAGGAGGCTCTTaGGCTGCCTCTCACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTVEGGS*AASHLL Trigger: CAGAAGGTGAGAGGCAGCTCAAGAGCCTCCTTCAAC...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAGGAGGCTCTTGAGCTaGCTCTCACCTTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSRRLLS*LSPSVS Trigger: GGAAACAGAAGGTGAGAGGCAGCTCAAGAGCCTCCT...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTCATTGTCCCAGCTaGTTCCTTCCCAAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLSHCPS*FLPKGL Trigger: AAGCCCTTTGGGAAGGAAGCAGCTGGGACAATGACT...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAAGCCGTTTCTGTATTaGTTCGGGAGTTGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLKPFLY*FGSCPQ Trigger: CTGAGGGCAACTCCCGAAGCAATACAGAAACGGCTT...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCCTTAGCATCAAAGCCTACCTGCCTCTTGCTCCTGGATGTTGAGATTGCCTTTACCCTGTGCTaGCTGTTTTCCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLALASKPTCLLLLDVEIAFTLC*LFSLVL Trigger: CAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGC...AATCTCAACATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGCTAAGGCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTGCCTTTACCCTGTGCTaGCTGTTTTCCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTISVDAEDQTQVLCKSSAFTLC*LFSLVL Trigger: CAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGC...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGGGGCCTTTACCCTGTaGTGCCTGTTTTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTGAFTL*CLFSLV Trigger: GACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCC...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCTTGCCACATGGAGCCTaGGGCCTTTACCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFLPHGA*GLYPVL Trigger: CAGCACAGGGTAAAGGCCCCAGGCTCCATGTGGCAA...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAGCACAGGCTGGCCTTAGCATCAAAGCCTACCTGCCTCTTGCTCCTGGATAATAGCAGGGCCTTCTaGAAATTCTTTCCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQHRLALASKPTCLLLLDNSRAF*KFFPWE Trigger: TTCCCAGGGAAAGAATTTCCAGAAGGCCCTGCTATT...ATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGCTAAGGCCAGCCTGTGCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCCAGCTGTTTGCTCTTTaGAAACCTCTGTGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSQLFAL*KPLWQA Trigger: TGCCTGCCACAGAGGTTTTCAAAGAGCAAACAGCTG...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCCTTGTCCTGGAGGAGTaGTGGCTTCTCAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVFQIYPASSAETGYFLVLEE*WLLSCA Trigger: GGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAG...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAAGCCGTTTCTGTATTaGTTCGGGAGTTGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSKPFLY*FGSCPQ Trigger: CTGAGGGCAACTCCCGAAGCAATACAGAAACGGCTT...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTGCTGAGACCAGTGAGTaGCAAGCAAAGGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GTISVDAEDQTQVLCKSSAETSE*QAKDSP Trigger: AGGTGAATCCTTTGCTTGCCACTCACTGGTCTCAGC...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTTCACAACCATCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTGAATTGCCACATGGAGCCTaGGGCCTTTACCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVHNHLYWDQMPSSGVSELPHGA*GLYPVL Trigger: CAGCACAGGGTAAAGGCCCCAGGCTCCATGTGGCAA...TTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGTCGGAACTGAATGGGTaGTCCTTTCTTCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLSELNG*SFLLLE Trigger: TTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGA...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR CAA 72 bp | CACAGGCTGGCCTTAGCATCAAAGCCTACCTGCCTCTaGCTCCTGGATGTTGAGATTACAGGCTTGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: HRLALASKPTCL*LLDVEITGLGL Trigger: TAATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGCTAAGGCCAGCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCCAGCTGTTTGCTCTTTaGAAACCTCTGTGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTQLFAL*KPLWQA Trigger: TGCCTGCCACAGAGGTTTTCAAAGAGCAAACAGCTG...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTCGGATCTCCTCCTCTaGCAAACGATTTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSSDLLL*QTISLD Trigger: ATCCAGAGAAATCGTTTGTCAGAGGAGGAGATCCGA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCGTCATCATTCGGAACTaGATGGGTGGTCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSVIIRN*MGGPFF Trigger: GAAGAAAGGACCACCCATTCAGTTCCGAATGATGAC...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCAGGAGGCTCTTGAGCTaGCTCTCACCTTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFRRLLS*LSPSVS Trigger: GGAAACAGAAGGTGAGAGGCAGCTCAAGAGCCTCCT...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGGTGGCAGGCAAAGGATaGGCTGGCGCTCTGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLVAGKG*AGALRF Trigger: GAATCTCAGAGCGCCAGCGCATCCTTTGCCTGCCAC...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCGCCTTTACCCTGTGCTaGCTGTTTTCCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFAFTLC*LFSLVL Trigger: CAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGC...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCGGGGCCTTTACCCTGTaGTGCCTGTTTTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVFQIYPASSAETGYFGAFTL*CLFSLV Trigger: GACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCC...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTTCACAACCATCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTGAAGGGGCCTTTACCCTGTaGTGCCTGTTTTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVHNHLYWDQMPSSGVSEGAFTL*CLFSLV Trigger: GACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCC...TTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTGTTTTCCCTTGTCCTaGAGGAGTGATGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSCFPLS*RSDGFS Trigger: TGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCATAAGCTTTGCCACATaGAGCCTGGGGCCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFISFAT*SLGPLP Trigger: GGGTAAAGGCCCCAGGCTCCATGTGGCAAAGCTTAT...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAGCACAGGCTGGCCTTAGCATCAAAGCCTACCTGCCTCTTGCTCCTGGATGACAAACGATTTCTCTaGATCTCATCTTCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VQHRLALASKPTCLLLLDDKRFL*ISSSGI Trigger: TATCCCAGAAGATGAGATCCAGAGAAATCGTTTGTC...ATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGCTAAGGCCAGCCTGTGCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCCTTAGCATCAAAGCCTACCTGCCTCTTGCTCCTGGATGTTGAGATTTCGGAACTGAATGGGTaGTCCTTTCTTCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLALASKPTCLLLLDVEISELNG*SFLLLE Trigger: TTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGA...AATCTCAACATCCAGGAGCAAGAGGCAGGTAGGCTTTGATGCTAAGGCCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGTCATTCGGAACTGAATaGGTGGTCCTTTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLSFGTE*VVLSSP Trigger: AGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGA...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGGTTGAAGGAGGCTCTTaGGCTGCCTCTCACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLVEGGS*AASHLL Trigger: CAGAAGGTGAGAGGCAGCTCAAGAGCCTCCTTCAAC...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAAAGCTTGCCCCCTCATaGGTCCAGTCATCATTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRKLAPS*VQSSFG Trigger: TCCGAATGATGACTGGACGCATGAGGGGGCAAGCTT...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTGTTCCAGGTTGTTCATaGGGTCACCTTTGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTISVDAEDQTQVLCKSSVPGCS*GHLCSS Trigger: AGAAGAACAAAGGTGACCCCATGAACAACCTGGAAC...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCGCTGAGACCAGTGAGTaGCAAGCAAAGGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFAETSE*QAKDSP Trigger: AGGTGAATCCTTTGCTTGCCACTCACTGGTCTCAGC...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCTGTTTTCCCTTGTCCTaGAGGAGTGATGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTCFPLS*RSDGFS Trigger: TGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACA...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTCATTCGGAACTGAATaGGTGGTCCTTTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSSFGTE*VVLSSP Trigger: AGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | GCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTAGTTGAAGGAGGCTCTTaGGCTGCCTCTCACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AYVVPFLSRSVITEVRTLVEGGS*AASHLL Trigger: CAGAAGGTGAGAGGCAGCTCAAGAGCCTCCTTCAAC...TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | TTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTACACTTGTCCTGGAGGAGTaGTGGCTTCTCAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCCSILVQVGHHRSENITLVLEE*WLLSCA Trigger: GGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAG...TGTAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | GTGGTTCACAACCATCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTGAAAAGCCGTTTCTGTATTaGTTCGGGAGTTGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVHNHLYWDQMPSSGVSEKPFLY*FGSCPQ Trigger: CTGAGGGCAACTCCCGAAGCAATACAGAAACGGCTT...TTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AACATTTCTGTGGTTTTTGTAGACAAGGTCTTGTTGTGCAGCACAGGCTGGCCTAAGCCGTTTCTGTATTaGTTCGGGAGTTGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NISVVFVDKVLLCSTGWPKPFLY*FGSCPQ Trigger: CTGAGGGCAACTCCCGAAGCAATACAGAAACGGCTT...AGGCCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAAAACCACAGAAATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| CDS-3UTR CCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTTCCAGGTTGTTCATaGGGTCACCTTTGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTVPGCS*GHLCSS Trigger: AGAAGAACAAAGGTGACCCCATGAACAACCTGGAAC...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR CCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGCTGAGACCAGTGAGTaGCAAGCAAAGGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRAETSE*QAKDSP Trigger: AGGTGAATCCTTTGCTTGCCACTCACTGGTCTCAGC...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCAAAACTATGGTGGTTGCCACATGGAGCCTaGGGCCTTTACCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQSQTSTIAQRSASKLWWLPHGA*GLYPVL Trigger: CAGCACAGGGTAAAGGCCCCAGGCTCCATGTGGCAA...CCACCATAGTTTTGAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | AGCACAGAGAAGTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAAATAAGCTTTGCCACATaGAGCCTGGGGCCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: STEKCLKTMVGKEVVTMEISFAT*SLGPLP Trigger: GGGTAAAGGCCCCAGGCTCCATGTGGCAAAGCTTAT...TTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCACTTCTCTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGATCGGATCTCCTCCTCTaGCAAACGATTTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRSDLLL*QTISLD Trigger: ATCCAGAGAAATCGTTTGTCAGAGGAGGAGATCCGA...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCTTCGGGTCAGCTGTTTaGTCTTTGAAAACCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFFGSAV*SLKTSV Trigger: CACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAA...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR GCA 90 bp | AATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCAAAACTATGGTGGGGGGCCTTTACCCTGTaGTGCCTGTTTTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQSQTSTIAQRSASKLWWGAFTL*CLFSLV Trigger: GACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCC...CCACCATAGTTTTGAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| CDS-3UTR GCA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGAAAATCAATAAGCTTTaGCACATGGAGCCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WMLRIKLRSSARAVSTLMKINKL*HMEPGA Trigger: GGCCCCAGGCTCCATGTGGCAAAGCTTATTGATTTT...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AAATACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTAAGCTTGCCCCCTCATaGGTCCAGTCATCATTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYFLGWRDDSEVKSTDCSKLAPS*VQSSFG Trigger: TCCGAATGATGACTGGACGCATGAGGGGGCAAGCTT...AGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTAAAGCTTGCCCCCTCATaGGTCCAGTCATCATTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AYVVPFLSRSVITEVRTLKLAPS*VQSSFG Trigger: TCCGAATGATGACTGGACGCATGAGGGGGCAAGCTT...TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| CDS-3UTR GCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTATCCATTAATTTGGTaGAGTGCTTGCCATGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSYPLIW*SACHAM Trigger: CATAGCATGGCAAGCACTGCACCAAATTAATGGATA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR CCA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAGACACATTCTTCAATaGAGACAGAGGTATCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSIPSRHILQ*RQRYRV Trigger: AACTCGATACCTCTGTCTCCATTGAAGAATGTGTCT...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR CCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCTGTAGTGTCTGGAACTaGGACAAAGTCATTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFCSVWN*DKVIVP Trigger: TGGGACAATGACTTTGTCCCAGTTCCAGACACTACA...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCTGTTTTCCCTTGTCCTaGAGGAGTGATGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVFQIYPASSAETGYFCFPLS*RSDGFS Trigger: TGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACA...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR CCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGTTATATCCATTAATTTaGTGCAGTGCTTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLLYPLI*CSACHA Trigger: AGCATGGCAAGCACTGCACCAAATTAATGGATATAA...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR CAA 72 bp | CAGCCTTTTTGTCCTATTATTGGCAGGTCTGAGGGTTaGAACTCAGGTCTTCCTGTTTGGTGGCAAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFCPIIGRSEG*NSGLPVWWQMP Trigger: AGGCATTTGCCACCAAACAGGAAGACCTGAGTTCAAACCCTCAGACCTGCCAATAATAGGACAAAAAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | GCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTACAGCTGTTTGCTCTTTaGAAACCTCTGTGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYVVPFLSRSVITEVRTLQLFAL*KPLWQA Trigger: TGCCTGCCACAGAGGTTTTCAAAGAGCAAACAGCTG...TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCTTACCCCTCAGGGTATTTTCTGCCATATATAGTGTTTCATTATTACTTGTCCTGGAGGAGTaGTGGCTTCTCAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMVLPLRVFSAIYSVSLLLVLEE*WLLSCA Trigger: GGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAG...TAATAATGAAACACTATATATGGCAGAAAATACCCTGAGGGGTAAGACCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGGTCATCATTCGGAACTaGATGGGTGGTCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLVIIRN*MGGPFF Trigger: GAAGAAAGGACCACCCATTCAGTTCCGAATGATGAC...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | AACATTTCTGTGGTTTTTGTAGACAAGGTCTTGTTGTGCAGCACAGGCTGGCCTGTAGTGCCACTGAGTTaGAAATTGTCAAGTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NISVVFVDKVLLCSTGWPVVPLS*KLSSTP Trigger: GGGAGTACTTGACAATTTTCAACTCAGTGGCACTAC...AGGCCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAAAACCACAGAAATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCTTCGGGTCAGCTGTTTaGTCTTTGAAAACCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAVFQIYPASSAETGYFFGSAV*SLKTSV Trigger: CACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAA...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCAGACACATTCTTCAATaGAGACAGAGGTATCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTRHILQ*RQRYRV Trigger: AACTCGATACCTCTGTCTCCATTGAAGAATGTGTCT...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGTTTTCACCGGAAACATaGCTTTTCCAGATCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: GGEMTQRLRALTALPEVLFSPET*LFQINI Trigger: AATATTGATCTGGAAAAGCCATGTTTCCGGTGAAAA...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGTTCCAGGTTGTTCATaGGGTCACCTTTGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRVPGCS*GHLCSS Trigger: AGAAGAACAAAGGTGACCCCATGAACAACCTGGAAC...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| 3UTR CAA 72 bp | TGGAGGGGAGAGGAGAAAGCTTATGTTGTTCCATTCTaGTCCAGGTCGGTCATCACAGAAGTGAGAACATTA | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEKAYVVPF*SRSVITEVRTL Trigger: TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGCTTTCTCCTCTCCCCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | CACATGGTCTTACCCCTCAGGGTATTTTCTGCCATATATAGTGTTTCATTATTAGTTGAAGGAGGCTCTTaGGCTGCCTCTCACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVLPLRVFSAIYSVSLLVEGGS*AASHLL Trigger: CAGAAGGTGAGAGGCAGCTCAAGAGCCTCCTTCAAC...TAATAATGAAACACTATATATGGCAGAAAATACCCTGAGGGGTAAGACCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | ACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTGCCTTTCCTCTAAAGAACTCGGATCTCCTCCTCTaGCAAACGATTTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TINESLGNLRQAAFPLKNSDLLL*QTISLD Trigger: ATCCAGAGAAATCGTTTGTCAGAGGAGGAGATCCGA...GTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTCCTGGATGTTGAGATTACAGGCTTGGGATTATACATCTGAATACCCTGTCATCATTCGGAACTaGATGGGTGGTCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSWMLRLQAWDYTSEYPVIIRN*MGGPFF Trigger: GAAGAAAGGACCACCCATTCAGTTCCGAATGATGAC...AGGGTATTCAGATGTATAATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTGTGGCAGGCAAAGGATaGGCTGGCGCTCTGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCVAGKG*AGALRF Trigger: GAATCTCAGAGCGCCAGCGCATCCTTTGCCTGCCAC...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCGTGGCAGGCAAAGGATaGGCTGGCGCTCTGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNESITDFYNSTEKCVAGKG*AGALRF Trigger: GAATCTCAGAGCGCCAGCGCATCCTTTGCCTGCCAC...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGTTCGGGTCAGCTGTTTaGTCTTTGAAAACCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLFGSAV*SLKTSV Trigger: CACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAA...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAGTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATAAAAATCAATAAGCTTTaGCACATGGAGCCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKCLKTMVGKEVVTMECIKINKL*HMEPGA Trigger: GGCCCCAGGCTCCATGTGGCAAAGCTTATTGATTTT...TATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCACTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCATAAATTCTATTGGTTaGTTCAGCGTCTTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFINSIG*FSVLGP Trigger: TGGGCCTAAGACGCTGAAGCAACCAATAGAATTTAT...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCATTTGGTGCAGTGCTTaGCATGCTATGTCTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFIWCSA*HAMSLL Trigger: CAATAAAGACATAGCATGGCAAGCACTGCACCAAAT...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCTATCCATTAATTTGGTaGAGTGCTTGCCATGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFYPLIW*SACHAM Trigger: CATAGCATGGCAAGCACTGCACCAAATTAATGGATA...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCAAAACTATGGTGGGCTGAGACCAGTGAGTaGCAAGCAAAGGATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NQSQTSTIAQRSASKLWWAETSE*QAKDSP Trigger: AGGTGAATCCTTTGCTTGCCACTCACTGGTCTCAGC...CCACCATAGTTTTGAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | AAATACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTGATGCGCTGGCGCTCTaGGATTCTTTCTTTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: KYFLGWRDDSEVKSTDCSDALAL*DSFFNI Trigger: GATATTAAAGAAAGAATCTCAGAGCGCCAGCGCATC...AGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | AACATTTCTGTGGTTTTTGTAGACAAGGTCTTGTTGTGCAGCACAGGCTGGCCTCTTGAAAAGTTCAGATaGTGCTGTCTTCAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NISVVFVDKVLLCSTGWPLEKFR*CCLQYH Trigger: ATGGTACTGAAGACAGCATCATCTGAACTTTTCAAG...AGGCCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAAAACCACAGAAATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGAGGAGGCTCTTGAGCTaGCTCTCACCTTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLNRLISKHIPYIDKGSWRRLLS*LSPSVS Trigger: GGAAACAGAAGGTGAGAGGCAGCTCAAGAGCCTCCT...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCGGCCCAGTCCAATATTaGTCAGTTGGAAAATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVFQIYPASSAETGYFGPVQY*SVGKSI Trigger: TATTGATTTTCCAACTGAGCAATATTGGACTGGGCC...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGATAAATTCTATTGGTTaGTTCAGCGTCTTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMLRIKLRSSARAVSTLMINSIG*FSVLGP Trigger: TGGGCCTAAGACGCTGAAGCAACCAATAGAATTTAT...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCAGACACATTCTTCAATaGAGACAGAGGTATCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRAVFQIYPASSAETGYFRHILQ*RQRYRV Trigger: AACTCGATACCTCTGTCTCCATTGAAGAATGTGTCT...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCACCTTTGTTCTTCTTTaGGGGTTCATCTTGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFTFVLL*GFILVI Trigger: TATTACCAAGATGAACCCCCAAAGAAGAACAAAGGT...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTCCTGGATGTTGAGATTACAGGCTTGGGATTATACATCTGAATACCCTGTTCCAGGTTGTTCATaGGGTCACCTTTGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSWMLRLQAWDYTSEYPVPGCS*GHLCSS Trigger: AGAAGAACAAAGGTGACCCCATGAACAACCTGGAAC...AGGGTATTCAGATGTATAATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGATCACCTCTCAAAAGTTaGAACTCTTCAAGACGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRSPLKS*NSSRRF Trigger: AAAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGA...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGTCACCTCTCAAAAGTTaGAACTCTTCAAGACGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WMLRIKLRSSARAVSTLMSPLKS*NSSRRF Trigger: AAAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGA...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGACAAACGATTTCTCTaGATCTCATCTTCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRDKRFL*ISSSGI Trigger: TATCCCAGAAGATGAGATCCAGAGAAATCGTTTGTC...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTATCATTCGGAACTGAATaGGTGGTCCTTTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AYVVPFLSRSVITEVRTLSFGTE*VVLSSP Trigger: AGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGA...TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | AAATACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCATTCGGAACTGAATaGGTGGTCCTTTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYFLGWRDDSEVKSTDCSSFGTE*VVLSSP Trigger: AGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGA...AGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGTAGTCACAATGGAATGCATACAACAGATTACAAGTGTGAAAGTTGGAACTCGGATCTCCTCCTCTaGCAAACGATTTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSHNGMHTTDYKCESWNSDLLL*QTISLD Trigger: ATCCAGAGAAATCGTTTGTCAGAGGAGGAGATCCGA...GTTCCAACTTTCACACTTGTAATCTGTTGTATGCATTCCATTGTGACTACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | ACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTGCCTTTCCTCTAAAGAACTATCTTCCTCTTCATTaGGGTCATGTACTTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TINESLGNLRQAAFPLKNYLPLH*GHVLVC Trigger: GCAGACAAGTACATGACCTCAATGAAGAGGAAGATA...GTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | AACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCAGGAGGCTCTTGAGCTaGCTCTCACCTTCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNKNESITDFYNSTEKCLRRLLS*LSPSVS Trigger: GGAAACAGAAGGTGAGAGGCAGCTCAAGAGCCTCCT...GAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTGCCTTTACCCTGTGCTaGCTGTTTTCCCTTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCAFTLC*LFSLVL Trigger: CAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGC...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGACCTTTGTTCTTCTTTaGGGGTTCATCTTGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: WMLRIKLRSSARAVSTLMTFVLL*GFILVI Trigger: TATTACCAAGATGAACCCCCAAAGAAGAACAAAGGT...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113007.8 |
||
| CDS-3UTR CCA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCAATAAGCTTTGCCACATaGAGCCTGGGGCCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSISFAT*SLGPLP Trigger: GGGTAAAGGCCCCAGGCTCCATGTGGCAAAGCTTAT...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGATTATATCCATTAATTTaGTGCAGTGCTTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRLYPLI*CSACHA Trigger: AGCATGGCAAGCACTGCACCAAATTAATGGATATAA...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATACAACAATAAATTCTATTGGTTaGTTCAGCGTCTTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPQNYGGKGSSHNGMHTTINSIG*FSVLGP Trigger: TGGGCCTAAGACGCTGAAGCAACCAATAGAATTTAT...TGTTGTATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | AAATACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTATCCATTAATTTGGTaGAGTGCTTGCCATGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: KYFLGWRDDSEVKSTDCSYPLIW*SACHAM Trigger: CATAGCATGGCAAGCACTGCACCAAATTAATGGATA...AGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGATTTTCACCGGAAACATaGCTTTTCCAGATCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRFSPET*LFQINI Trigger: AATATTGATCTGGAAAAGCCATGTTTCCGGTGAAAA...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | AGCACAGAGAAGTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAAACCTTTGTTCTTCTTTaGGGGTTCATCTTGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: STEKCLKTMVGKEVVTMETFVLL*GFILVI Trigger: TATTACCAAGATGAACCCCCAAAGAAGAACAAAGGT...TTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCACTTCTCTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | AAATACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTGACAAACGATTTCTCTaGATCTCATCTTCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KYFLGWRDDSEVKSTDCSDKRFL*ISSSGI Trigger: TATCCCAGAAGATGAGATCCAGAGAAATCGTTTGTC...AGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGTCGGAACTGAATGGGTaGTCCTTTCTTCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNRLISKHIPYIDKGSWSELNG*SFLLLE Trigger: TTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGA...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | CACATGGTCTTACCCCTCAGGGTATTTTCTGCCATATATAGTGTTTCATTATTATCGGAACTGAATGGGTaGTCCTTTCTTCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMVLPLRVFSAIYSVSLLSELNG*SFLLLE Trigger: TTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGA...TAATAATGAAACACTATATATGGCAGAAAATACCCTGAGGGGTAAGACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR TCA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTGTCATCATTCGGAACTaGATGGGTGGTCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCVIIRN*MGGPFF Trigger: GAAGAAAGGACCACCCATTCAGTTCCGAATGATGAC...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | TTAATCATGCTGATCCCACAGCCTGAGCTATCACTATGTAAAATTATCAGAGAATTCGGGTCAGCTGTTTaGTCTTTGAAAACCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIMLIPQPELSLCKIIREFGSAV*SLKTSV Trigger: CACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAA...TTCTCTGATAATTTTACATAGTGATAGCTCAGGCTGTGGGATCAGCATGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTAAAATCAATAAGCTTTaGCACATGGAGCCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCKINKL*HMEPGA Trigger: GGCCCCAGGCTCCATGTGGCAAAGCTTATTGATTTT...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCAAAAATCAATAAGCTTTaGCACATGGAGCCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSKINKL*HMEPGA Trigger: GGCCCCAGGCTCCATGTGGCAAAGCTTATTGATTTT...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCAGTTGTGGCACGTTTTAATTGGAGACCAATGTTTATAGTTACAGAGTTTCCCAAGCTCAGCTCATaGTGCTTGAAAAGTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSVVARFNWRPMFIVTEFPKLSS*CLKSSD Trigger: ATCTGAACTTTTCAAGCAGCATGAGCTGAGCTTGGG...AAACTCTGTAACTATAAACATTGGTCTCCAATTAAAACGTGCCACAACTGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCTGTTTTCCCTTGTCCTaGAGGAGTGATGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNESITDFYNSTEKCCFPLS*RSDGFS Trigger: TGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACA...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR TCA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCTCAGCTCATGCTGCTTaGAAAGTTCAGATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNESITDFYNSTEKCSAHAA*KVQMML Trigger: CAGCATCATCTGAACTTTTCAAGCAGCATGAGCTGA...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | GGAAGTAGTCACAATGGAATGCATACAACAGATTACAAGTGTGAAAGTTGGAACTCACCTCTCAAAAGTTaGAACTCTTCAAGACGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSSHNGMHTTDYKCESWNSPLKS*NSSRRF Trigger: AAAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGA...GTTCCAACTTTCACACTTGTAATCTGTTGTATGCATTCCATTGTGACTACTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| 3UTR CAA 72 bp | TCTTCTTCAACAACTATAAACGAATCACTAGGGAATTaGAGGCAGGCTGCCTTTCCTCTAAAGAACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSTTINESLGN*RQAAFPLKNFL Trigger: AAGAAAGTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGTTGTTGAAGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCTTACCCCTCAGGGTATTTTCTGCCATATATAGTGTTTCATTATTAGGCCCAGTCCAATATTaGTCAGTTGGAAAATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HMVLPLRVFSAIYSVSLLGPVQY*SVGKSI Trigger: TATTGATTTTCCAACTGAGCAATATTGGACTGGGCC...TAATAATGAAACACTATATATGGCAGAAAATACCCTGAGGGGTAAGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAAATTCTATTGGTTaGTTCAGCGTCTTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTRSFFSLNRLISKHIPYINSIG*FSVLGP Trigger: TGGGCCTAAGACGCTGAAGCAACCAATAGAATTTAT...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | CACATGGTCTTACCCCTCAGGGTATTTTCTGCCATATATAGTGTTTCATTATTAATTTGGTGCAGTGCTTaGCATGCTATGTCTTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVLPLRVFSAIYSVSLLIWCSA*HAMSLL Trigger: CAATAAAGACATAGCATGGCAAGCACTGCACCAAAT...TAATAATGAAACACTATATATGGCAGAAAATACCCTGAGGGGTAAGACCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | ACCTCAGTTGTGGCACGTTTTAATTGGAGACCAATGTTTATAGTTACAGAGTTTAAGCTCAGCTCATGCTaGTTGAAAAGTTCAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSVVARFNWRPMFIVTEFKLSSC*LKSSDD Trigger: ATCATCTGAACTTTTCAAGCAGCATGAGCTGAGCTT...AAACTCTGTAACTATAAACATTGGTCTCCAATTAAAACGTGCCACAACTGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATGGTCATGTACTTGTCTaGACTTGTCTTTTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTRSFFSLNRLISKHIPYGHVLV*TCLFVV Trigger: TACCACAAAAAGACAAGTGCAGACAAGTACATGACC...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | TTAATCATGCTGATCCCACAGCCTGAGCTATCACTATGTAAAATTATCAGAGAAAGACACATTCTTCAATaGAGACAGAGGTATCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIMLIPQPELSLCKIIRERHILQ*RQRYRV Trigger: AACTCGATACCTCTGTCTCCATTGAAGAATGTGTCT...TTCTCTGATAATTTTACATAGTGATAGCTCAGGCTGTGGGATCAGCATGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | AATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCAAAACTATGGTGGTTTTCACCGGAAACATaGCTTTTCCAGATCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: NQSQTSTIAQRSASKLWWFSPET*LFQINI Trigger: AATATTGATCTGGAAAAGCCATGTTTCCGGTGAAAA...CCACCATAGTTTTGAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR GCA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCGGCCCAGTCCAATATTaGTCAGTTGGAAAATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HNNKNESITDFYNSTEKCGPVQY*SVGKSI Trigger: TATTGATTTTCCAACTGAGCAATATTGGACTGGGCC...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CCA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTGACAAACGATTTCTCTaGATCTCATCTTCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCDKRFL*ISSSGI Trigger: TATCCCAGAAGATGAGATCCAGAGAAATCGTTTGTC...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CCA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATTTATATCCATTAATTTaGTGCAGTGCTTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTRSFFSLNRLISKHIPYLYPLI*CSACHA Trigger: AGCATGGCAAGCACTGCACCAAATTAATGGATATAA...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR GCA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATTGTCTTTTTGTGGTATaGTTGGTAATAAAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTRSFFSLNRLISKHIPYCLFVV*LVIKSL Trigger: AAGGCTCTTTATTACCAAGCATACCACAAAAAGACA...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS CCA 90 bp | TGGAGCCTGGGGCCTTTACCCTGTGCTGCCTGTTTTCCCTTGTCCTaGAGGAGTGATGGCTTCTCAGCTGTGCCACTACCACTCACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WSLGPLPCAACFPLS*RSDGFSAVPLPLTD Trigger: ATCCGTGAGTGGTAGTGGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCCAGGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTTCCTTCCCAAAGGGCTaGTACATAGTCCCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTISVDAEDQTQVLCKSSSFPKG*YIVPGA Trigger: TGCGCCTGGGACTATGTACAAGCCCTTTGGGAAGGA...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGGGTATCGAGTTGATGTaGAAGGAGGCTCTTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGEMTQRLRALTALPEVLGIELM*KEALEL Trigger: CAGCTCAAGAGCCTCCTTCAACATCAACTCGATACC...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS TCA 90 bp | GTGAGGAAAGCTTGCCCCCTCATGCGTCCAGTCATCATTCGGAACTaGATGGGTGGTCCTTTCTTCTCCTGGAATCGAGCGAATAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRKACPLMRPVIIRN*MGGPFFSWNRANNE Trigger: CTCATTATTCGCTCGATTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCCAAGCCGTTTCTGTATaGCTTCGGGAGTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTQAVSV*LRELPS Trigger: TGAGGGCAACTCCCGAAGCAATACAGAAACGGCTTG...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS TCA 90 bp | AGTGAAAATAGCAGGGCCTTCTGGAAATTCTTTCCCTGGGAAAGGTaGGGAAAGCTTGCCCCCTCATGCGTCCAGTCATCATTCGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SENSRAFWKFFPWER*GKLAPSCVQSSFGT Trigger: AGTTCCGAATGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCACCTTTCCCAGGGAAAGAATTTCCAGAAGGCCCTGCTATTTTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTTCATGGGGTCACCTTaGTTCTTCTTTGGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRLRALTALPEVLSSIPSFMGSP*FFFGGS Trigger: TGAACCCCCAAAGAAGAACAAAGGTGACCCCATGAA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS CCA 90 bp | CTGAGAGAAGCAGTTTCCTGGTCTTTTTCATGTAGTGTCTGGAACTaGGACAAAGTCATTGTCCCAGCTGCTTCCTTCCCAAAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LREAVSWSFSCSVWN*DKVIVPAASFPKGL Trigger: CAAGCCCTTTGGGAAGGAAGCAGCTGGGACAATGACTTTGTCCCAGTTCCAGACACTACATGAAAAAGACCAGGAAACTGCTTCTCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTTCACAACCATCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTGAAACTGGGACAAAGTCATaGTCCCAGCTGCTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVHNHLYWDQMPSSGVSETGTKS*SQLLPS Trigger: GGAAGGAAGCAGCTGGGACAATGACTTTGTCCCAGT...TTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGACAAGCCGTTTCTGTATaGCTTCGGGAGTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRQAVSV*LRELPS Trigger: TGAGGGCAACTCCCGAAGCAATACAGAAACGGCTTG...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCCTTCGGGTCAGCTGTTaGCTCTTTGAAAACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTLRVSC*LFENLC Trigger: ACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAAG...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTGATAAATTCTATTGGTaGCTTCAGCGTCTTAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTISVDAEDQTQVLCKSSDKFYW*LQRLRP Trigger: GGGCCTAAGACGCTGAAGCAACCAATAGAATTTATC...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | CATTTCTGTGGTTTTTGTAGACAAGGTCTTGTTGTGCAGCACAGGCTGGCCTTAGGTATCGAGTTGATGTaGAAGGAGGCTCTTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFCGFCRQGLVVQHRLALGIELM*KEALEL Trigger: CAGCTCAAGAGCCTCCTTCAACATCAACTCGATACC...TAAGGCCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAAAACCACAGAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | GTGGTTCACAACCATCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTGAAGGTATCGAGTTGATGTaGAAGGAGGCTCTTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVHNHLYWDQMPSSGVSEGIELM*KEALEL Trigger: CAGCTCAAGAGCCTCCTTCAACATCAACTCGATACC...TTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATACAACATCCTTCCCAAAGGGCTaGTACATAGTCCCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPQNYGGKGSSHNGMHTTSFPKG*YIVPGA Trigger: TGCGCCTGGGACTATGTACAAGCCCTTTGGGAAGGA...TGTTGTATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCTTCACCTCTCAAAAGTaGGAACTCTTCAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QRLRALTALPEVLSSIPSFTSQK*ELFKTL Trigger: AAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGAA...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GGAACCATCAGTGTGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTTTCACCTCTCAAAAGTaGGAACTCTTCAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTISVDAEDQTQVLCKSSFTSQK*ELFKTL Trigger: AAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGAA...ACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCACACTGATGGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGTGTACTTGTCTGCACTaGTCTTTTTGTGGTATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGEMTQRLRALTALPEVLCTCLH*SFCGML Trigger: AAGCATACCACAAAAAGACAAGTGCAGACAAGTACA...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS CCA 90 bp | AATTCCCTGAGAGAAGCAGTTTCCTGGTCTTTTTCATGTAGTGTCTaGAACTGGGACAAAGTCATTGTCCCAGCTGCTTCCTTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSLREAVSWSFSCSV*NWDKVIVPAASFPK Trigger: CTTTGGGAAGGAAGCAGCTGGGACAATGACTTTGTCCCAGTTCCAGACACTACATGAAAAAGACCAGGAAACTGCTTCTCTCAGGGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AAATACTTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTACTGGGACAAAGTCATaGTCCCAGCTGCTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYFLGWRDDSEVKSTDCSTGTKS*SQLLPS Trigger: GGAAGGAAGCAGCTGGGACAATGACTTTGTCCCAGT...AGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAAGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATACAACACAAGCCGTTTCTGTATaGCTTCGGGAGTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPQNYGGKGSSHNGMHTTQAVSV*LRELPS Trigger: TGAGGGCAACTCCCGAAGCAATACAGAAACGGCTTG...TGTTGTATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | AACATTTCTGTGGTTTTTGTAGACAAGGTCTTGTTGTGCAGCACAGGCTGGCCTCTTCGGGTCAGCTGTTaGCTCTTTGAAAACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NISVVFVDKVLLCSTGWPLRVSC*LFENLC Trigger: ACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAAG...AGGCCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAAAACCACAGAAATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGCTTCGGGTCAGCTGTTaGCTCTTTGAAAACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WMLRIKLRSSARAVSTLMLRVSC*LFENLC Trigger: ACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAAG...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AACATTTCTGTGGTTTTTGTAGACAAGGTCTTGTTGTGCAGCACAGGCTGGCCTTTCATGGGGTCACCTTaGTTCTTCTTTGGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NISVVFVDKVLLCSTGWPFMGSP*FFFGGS Trigger: TGAACCCCCAAAGAAGAACAAAGGTGACCCCATGAA...AGGCCAGCCTGTGCTGCACAACAAGACCTTGTCTACAAAAACCACAGAAATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCAGGCCCAGTCCAATATaGCTCAGTTGGAAAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTRPSPI*LSWKIN Trigger: ATTGATTTTCCAACTGAGCAATATTGGACTGGGCCT...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCGATAAATTCTATTGGTaGCTTCAGCGTCTTAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFDKFYW*LQRLRP Trigger: GGGCCTAAGACGCTGAAGCAACCAATAGAATTTATC...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTAAACATGGGTGACTTTGAGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCCATGCTATGTCTTTATaGGGAAAGGTGAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNMGDFEGHRSDSKAGSTHAMSL*GKVRKA Trigger: AGCTTTCCTCACCTTTCCCAATAAAGACATAGCATG...GGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGCTTTTTGTGGTATGCTaGGTAATAAAGAGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGEMTQRLRALTALPEVLLFVVC*VIKSLK Trigger: CTTAAGGCTCTTTATTACCAAGCATACCACAAAAAG...CAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCCACCTTTGTTCTTCTTaGGGGGTTCATCTTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFHLCSS*GVHLLC Trigger: GCACAAAAGATGAACCCCCAAAGAAGAACAAAGGTG...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTGCCTTTCCTCTAAAGAACGGTATCGAGTTGATGTaGAAGGAGGCTCTTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TINESLGNLRQAAFPLKNGIELM*KEALEL Trigger: CAGCTCAAGAGCCTCCTTCAACATCAACTCGATACC...GTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCAAAACTATGGTGGACTGGGACAAAGTCATaGTCCCAGCTGCTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQSQTSTIAQRSASKLWWTGTKS*SQLLPS Trigger: GGAAGGAAGCAGCTGGGACAATGACTTTGTCCCAGT...CCACCATAGTTTTGAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAATATTTCAGTTTCATaGAGCCCTAATTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRLRALTALPEVLSSIPSNISVS*SPNSLR Trigger: TCTCAGGGAATTAGGGCTCAATGAAACTGAAATATT...GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCAGGCCCAGTCCAATATaGCTCAGTTGGAAAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFRPSPI*LSWKIN Trigger: ATTGATTTTCCAACTGAGCAATATTGGACTGGGCCT...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCACAGGTCTGACTCCAAAGCTGGTTCTACCGTCTAAACCATTTAGGTTCGATATAGCACCTTGTTaGGTTCCCCTGGATTATATG | + |
|
Preference number: 5 (lower is better) Translates to: RVTGLTPKLVLPSKPFRFDIAPC*VPLDYM Trigger: CATATAATCCAGGGGAACCAAACAAGGTGCTATATC...GAACCTAAATGGTTTAGACGGTAGAACCAGCTTTGGAGTCAGACCTGTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS GCA 90 bp | ATAAATTCTATTGGTTGCTTCAGCGTCTTAGGCCCAGTCCAATATTaGTCAGTTGGAAAATCAATAAGCTTTGCCACATGGAGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: INSIGCFSVLGPVQY*SVGKSISFATWSLG Trigger: CCCCAGGCTCCATGTGGCAAAGCTTATTGATTTTCCAACTGAGCAATATTGGACTGGGCCTAAGACGCTGAAGCAACCAATAGAATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTGCCTTTCCTCTAAAGAACGACAGAGGTATCGAGTaGATGTTGAAGGAGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TINESLGNLRQAAFPLKNDRGIE*MLKEAL Trigger: AAGAGCCTCCTTCAACATCAACTCGATACCTCTGTC...GTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TGGATGCTGAGGATCAAACTCAGGTCCTCTGCAAGAGCAGTAAGTACTCTTATGTTCACCTCTCAAAAGTaGGAACTCTTCAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WMLRIKLRSSARAVSTLMFTSQK*ELFKTL Trigger: AAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGAA...CATAAGAGTACTTACTGCTCTTGCAGAGGACCTGAGTTTGATCCTCAGCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TCTAGAGCTGTCTTTCAGATCTATCCAGCATCCAGTGCTGAAACTGGCTACTTCTTCAGATATAGCACCTaGTTTGGTTCCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: SRAVFQIYPASSAETGYFFRYST*FGSPGL Trigger: TAATCCAGGGGAACCAAACAAGGTGCTATATCTGAA...GAAGTAGCCAGTTTCAGCACTGGATGCTGGATAGATCTGAAAGACAGCTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGACATGCTATGTCTTTATaGGGAAAGGTGAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRHAMSL*GKVRKA Trigger: AGCTTTCCTCACCTTTCCCAATAAAGACATAGCATG...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTTCCTTCCCAAAGGGCTaGTACATAGTCCCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCSFPKG*YIVPGA Trigger: TGCGCCTGGGACTATGTACAAGCCCTTTGGGAAGGA...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCATCCTTCCCAAAGGGCTaGTACATAGTCCCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSSFPKG*YIVPGA Trigger: TGCGCCTGGGACTATGTACAAGCCCTTTGGGAAGGA...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TCTTGCTCCTGGATGTTGAGATTACAGGCTTGGGATTATACATCTGAATACCCTGATAAATTCTATTGGTaGCTTCAGCGTCTTAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SCSWMLRLQAWDYTSEYPDKFYW*LQRLRP Trigger: GGGCCTAAGACGCTGAAGCAACCAATAGAATTTATC...AGGGTATTCAGATGTATAATCCCAAGCCTGTAATCTCAACATCCAGGAGCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | AAGCATATCCCATATATAGACAAAGGTAGCTGGGAACCATCAGTGTGGATGCTGGATATAGCACCTTGTTaGGTTCCCCTGGATTATATG | + |
|
Preference number: 5 (lower is better) Translates to: KHIPYIDKGSWEPSVWMLDIAPC*VPLDYM Trigger: CATATAATCCAGGGGAACCAAACAAGGTGCTATATC...CAGCATCCACACTGATGGTTCCCAGCTACCTTTGTCTATATATGGGATATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GAGAAGTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATAGGTAGTGCCACTGAGTaGAAAATTGTCAAGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKCLKTMVGKEVVTMECIGSATE*KIVKYS Trigger: GGAGTACTTGACAATTTTCAACTCAGTGGCACTACC...TATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCACTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGATTATCTTCCTCTTCATaGAGGTCATGTACTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRLSSSS*RSCTCL Trigger: CAGACAAGTACATGACCTCAATGAAGAGGAAGATAA...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTTCACAACCATCTATACTGGGATCAAATGCCCTCTTCTGGTGTGTCTGAATTGGGGGTTCATCTTTaGTGCCTAATTTTATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVHNHLYWDQMPSSGVSELGVHL*CLILSS Trigger: GGAAGATAAAATTAGGCACAAAAGATGAACCCCCAA...TTCAGACACACCAGAAGAGGGCATTTGATCCCAGTATAGATGGTTGTGAACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS GCA 90 bp | TTTCCCATAGAGTTTATATCCATTAATTTGGTGCAGTGCTTGCCATaGTATGTCTTTATTGGGAAAGGTGAGGAAAGCTTGCCCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPIEFISINLVQCLP*YVFIGKGEESLPPH Trigger: ATGAGGGGGCAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTCTATGGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTAGGGTGGAGAGATGACTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAAATATTTCAGTTTCATaGAGCCCTAATTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLGWRDDSEVKSTDCSSRNISVS*SPNSLR Trigger: TCTCAGGGAATTAGGGCTCAATGAAACTGAAATATT...TCTGGAAGAGCAGTCAGTGCTCTTAACCTCTGAGTCATCTCTCCACCCTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCACAAGCCGTTTCTGTATaGCTTCGGGAGTTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSQAVSV*LRELPS Trigger: TGAGGGCAACTCCCGAAGCAATACAGAAACGGCTTG...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTGCCTTTCCTCTAAAGAACCTTTGGGGGTTCATCTaGGTAATAAAGAGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TINESLGNLRQAAFPLKNLWGFI*VIKSLK Trigger: CTTAAGGCTCTTTATTACCAAGATGAACCCCCAAAG...GTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 |
||
| CDS-3UTR CAA 90 bp | GCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTACTTTGGGGGTTCATCTaGGTAATAAAGAGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: AYVVPFLSRSVITEVRTLLWGFI*VIKSLK Trigger: CTTAAGGCTCTTTATTACCAAGATGAACCCCCAAAG...TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | GAGAAGTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATAGATATAGCACCTTGTTaGGTTCCCCTGGATTATATG | + |
|
Preference number: 5 (lower is better) Translates to: EKCLKTMVGKEVVTMECIDIAPC*VPLDYM Trigger: CATATAATCCAGGGGAACCAAACAAGGTGCTATATC...TATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCACTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | GCTTATGTTGTTCCATTCTTGTCCAGGTCGGTCATCACAGAAGTGAGAACATTATTCAGATATAGCACCTaGTTTGGTTCCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: AYVVPFLSRSVITEVRTLFRYST*FGSPGL Trigger: TAATCCAGGGGAACCAAACAAGGTGCTATATCTGAA...TAATGTTCTCACTTCTGTGATGACCGACCTGGACAAGAATGGAACAACATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGCTTCGGGTCAGCTGTTaGCTCTTTGAAAACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLNRLISKHIPYIDKGSWLRVSC*LFENLC Trigger: ACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAAG...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR CAA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGTTCATGGGGTCACCTTaGTTCTTCTTTGGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLNRLISKHIPYIDKGSWFMGSP*FFFGGS Trigger: TGAACCCCCAAAGAAGAACAAAGGTGACCCCATGAA...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTGCCTCAAAACTATGGTGGGAAAGGAAGTAGTCACAATGGAATGCATACAACAAATATTTCAGTTTCATaGAGCCCTAATTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPQNYGGKGSSHNGMHTTNISVS*SPNSLR Trigger: TCTCAGGGAATTAGGGCTCAATGAAACTGAAATATT...TGTTGTATGCATTCCATTGTGACTACTTCCTTTCCCACCATAGTTTTGAGGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACGAATCACTAGGGAATTTGAGGCAGGCTGCCTTTCCTCTAAAGAACAATATTTCAGTTTCATaGAGCCCTAATTCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TINESLGNLRQAAFPLKNNISVS*SPNSLR Trigger: TCTCAGGGAATTAGGGCTCAATGAAACTGAAATATT...GTTCTTTAGAGGAAAGGCAGCCTGCCTCAAATTCCCTAGTGATTCGTTTATAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GACAAGACTTTAGTCCATTTGTATTTATTAAGGCCTGTTTTGTGGTTCAGTTCATTCATGGGGTCACCTTaGTTCTTCTTTGGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DKTLVHLYLLRPVLWFSSFMGSP*FFFGGS Trigger: TGAACCCCCAAAGAAGAACAAAGGTGACCCCATGAA...TGAACTGAACCACAAAACAGGCCTTAATAAATACAAATGGACTAAAGTCTTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS GCA 90 bp | CACCAATATTTTCCCATAGAGTTTATATCCATTAATTTGGTGCAGTaGTTGCCATGCTATGTCTTTATTGGGAAAGGTGAGGAAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HQYFPIEFISINLVQ*LPCYVFIGKGEESL Trigger: CAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTCTATGGGAAAATATTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATCTTTGGGGGTTCATCTaGGTAATAAAGAGCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTRSFFSLNRLISKHIPYLWGFI*VIKSLK Trigger: CTTAAGGCTCTTTATTACCAAGATGAACCCCCAAAG...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113007.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCAGTTGTGGCACGTTTTAATTGGAGACCAATGTTTATAGTTACAGAGTTTTTCACCTCTCAAAAGTaGGAACTCTTCAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSVVARFNWRPMFIVTEFFTSQK*ELFKTL Trigger: AAGCGTCTTGAAGAGTTCCAACTTTTGAGAGGTGAA...AAACTCTGTAACTATAAACATTGGTCTCCAATTAAAACGTGCCACAACTGAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGAGGCCCAGTCCAATATaGCTCAGTTGGAAAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLNRLISKHIPYIDKGSWRPSPI*LSWKIN Trigger: ATTGATTTTCCAACTGAGCAATATTGGACTGGGCCT...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | GTTACACGGTCTTTCTTCTCATTGAATAGGCTTATCTCTAAGCATATCCCATATCATGCTATGTCTTTATaGGGAAAGGTGAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTRSFFSLNRLISKHIPYHAMSL*GKVRKA Trigger: AGCTTTCCTCACCTTTCCCAATAAAGACATAGCATG...ATATGGGATATGCTTAGAGATAAGCCTATTCAATGAGAAGAAAGACCGTGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS-3UTR CAA 90 bp | AACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCCTCCTCAGCTCATGCTGCTaGAAAAGTTCAGATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NNKNESITDFYNSTEKCLLSSCC*KSSDDA Trigger: AGCATCATCTGAACTTTTCAAGCAGCATGAGCTGAG...GAGGCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | CACAACAATAAAAATGAATCAATCACAGACTTCTACAATAGCACAGAGAAGTGCAGGCCCAGTCCAATATaGCTCAGTTGGAAAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HNNKNESITDFYNSTEKCRPSPI*LSWKIN Trigger: ATTGATTTTCCAACTGAGCAATATTGGACTGGGCCT...GCACTTCTCTGTGCTATTGTAGAAGTCTGTGATTGATTCATTTTTATTGTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS-3UTR CAA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTGATATAGCACCTTGTTaGGTTCCCCTGGATTATATG | + |
|
Preference number: 5 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCDIAPC*VPLDYM Trigger: CATATAATCCAGGGGAACCAAACAAGGTGCTATATC...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | ATATGTTGTTTGATGTACTTAGTGGAGTACCCTAAAGTTCATTTTTCCCCTTGTTTCAGATATAGCACCTaGTTTGGTTCCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: ICCLMYLVEYPKVHFSPCFRYST*FGSPGL Trigger: TAATCCAGGGGAACCAAACAAGGTGCTATATCTGAA...ACAAGGGGAAAAATGAACTTTAGGGTACTCCACTAAGTACATCAAACAACATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS-3UTR CAA 90 bp | TCATTGAATAGGCTTATCTCTAAGCATATCCCATATATAGACAAAGGTAGCTGGATTGAGGTCATGTACTaGTCTGCACTTGTCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLNRLISKHIPYIDKGSWIEVMY*SALVFL Trigger: CAAAAAGACAAGTGCAGACAAGTACATGACCTCAAT...CCAGCTACCTTTGTCTATATATGGGATATGCTTAGAGATAAGCCTATTCAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
||
| CDS CAA 90 bp | GCCACATGGAGCCTGGGGCCTTTACCCTGTGCTGCCTGTTTTCCCTaGTCCTGGAGGAGTGATGGCTTCTCAGCTGTGCCACTACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ATWSLGPLPCAACFP*SWRSDGFSAVPLPL Trigger: GAGTGGTAGTGGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCCAGGCTCCATGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS CCA 72 bp | GGGCCTTTACCCTGTGCTGCCTGTTTTCCCTTGTCCTaGAGGAGTGATGGCTTCTCAGCTGTGCCACTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GPLPCAACFPLS*RSDGFSAVPLP Trigger: TGGTAGTGGCACAGCTGAGAAGCCATCACTCCTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS TCA 72 bp | GCTTGCCCCCTCATGCGTCCAGTCATCATTCGGAACTaGATGGGTGGTCCTTTCTTCTCCTGGAATCGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ACPLMRPVIIRN*MGGPFFSWNRA Trigger: CGCTCGATTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGATGACTGGACGCATGAGGGGGCAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS TCA 72 bp | AGCAGGGCCTTCTGGAAATTCTTTCCCTGGGAAAGGTaGGGAAAGCTTGCCCCCTCATGCGTCCAGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SRAFWKFFPWER*GKLAPSCVQSS Trigger: TGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCACCTTTCCCAGGGAAAGAATTTCCAGAAGGCCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
||
| CDS CCA 72 bp | GCCCCCTCATGCGTCCAGTCATCATTCGGAACTGAATaGGTGGTCCTTTCTTCTCCTGGAATCGAGCGAATA | + |
|
Preference number: 6 (lower is better) Translates to: APSCVQSSFGTE*VVLSSPGIERI Trigger: TATTCGCTCGATTCCAGGAGAAGAAAGGACCACCCATTCAGTTCCGAATGATGACTGGACGCATGAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS CAA 90 bp | CAGTGCTTGCCATGCTATGTCTTTATTGGGAAAGGTGAGGAAAGCTaGCCCCCTCATGCGTCCAGTCATCATTCGGAACTGAATGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QCLPCYVFIGKGEES*PPHASSHHSELNGW Trigger: CCACCCATTCAGTTCCGAATGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
||
| CDS TCA 72 bp | GCAGTGCTTGCCATGCTATGTCTTTATTGGGAAAGGTaGGGAAAGCTTGCCCCCTCATGCGTCCAGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: AVLAMLCLYWER*GKLAPSCVQSS Trigger: TGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS TCA 72 bp | AATTTCCATTTCTCTTCGGGTCAGCTGTTTGCTCTTTaGAAACCTCTGTGGCAGGCAAAGGATGCGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: NFHFSSGQLFAL*KPLWQAKDALA Trigger: CGCCAGCGCATCCTTTGCCTGCCACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAAGAGAAATGGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 72 bp | CCATGCTATGTCTTTATTGGGAAAGGTGAGGAAAGCTaGCCCCCTCATGCGTCCAGTCATCATTCGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: PCYVFIGKGEES*PPHASSHHSEL Trigger: CAGTTCCGAATGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 90 bp | AAGACTTCTCAATTTCCATTTCTCTTCGGGTCAGCTGTTTGCTCTTaGAAAACCTCTGTGGCAGGCAAAGGATGCGCTGGCGCTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KTSQFPFLFGSAVCS*KTSVAGKGCAGALR Trigger: TCTCAGAGCGCCAGCGCATCCTTTGCCTGCCACAGAGGTTTTCAAAGAGCAAACAGCTGACCCGAAGAGAAATGGAAATTGAGAAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 90 bp | AACTGGGACAAAGTCATTGTCCCAGCTGCTTCCTTCCCAAAGGGCTaGTACATAGTCCCAGGCGCAAAGCTCTTTTTCTTAGAGACACAT | + |
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Preference number: 6 (lower is better) Translates to: NWDKVIVPAASFPKG*YIVPGAKLFFLETH Trigger: ATGTGTCTCTAAGAAAAAGAGCTTTGCGCCTGGGACTATGTACAAGCCCTTTGGGAAGGAAGCAGCTGGGACAATGACTTTGTCCCAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 90 bp | CTTAGAGACACATTCTTCAATGGAGACAGAGGTATCGAGTTGATGTaGAAGGAGGCTCTTGAGCTGCCTCTCACCTTCTGTTTCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LRDTFFNGDRGIELM*KEALELPLTFCFQF Trigger: GAACTGGAAACAGAAGGTGAGAGGCAGCTCAAGAGCCTCCTTCAACATCAACTCGATACCTCTGTCTCCATTGAAGAATGTGTCTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS TCA 72 bp | AAACCTCTGTGGCAGGCAAAGGATGCGCTGGCGCTCTaGGATTCTTTCTTTAATATCTTCAAGCCGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KPLWQAKDALAL*DSFFNIFKPFL Trigger: CAGAAACGGCTTGAAGATATTAAAGAAAGAATCTCAGAGCGCCAGCGCATCCTTTGCCTGCCACAGAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CCA 72 bp | TATTGCTCAGTTGGAAAATCAATAAGCTTTGCCACATaGAGCCTGGGGCCTTTACCCTGTGCTGCCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: YCSVGKSISFAT*SLGPLPCAACF Trigger: AAAACAGGCAGCACAGGGTAAAGGCCCCAGGCTCCATGTGGCAAAGCTTATTGATTTTCCAACTGAGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 72 bp | ACATTCTTCAATGGAGACAGAGGTATCGAGTTGATGTaGAAGGAGGCTCTTGAGCTGCCTCTCACCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TFFNGDRGIELM*KEALELPLTFC Trigger: ACAGAAGGTGAGAGGCAGCTCAAGAGCCTCCTTCAACATCAACTCGATACCTCTGTCTCCATTGAAGAATGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 72 bp | AAAGTCATTGTCCCAGCTGCTTCCTTCCCAAAGGGCTaGTACATAGTCCCAGGCGCAAAGCTCTTTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: KVIVPAASFPKG*YIVPGAKLFFL Trigger: TAAGAAAAAGAGCTTTGCGCCTGGGACTATGTACAAGCCCTTTGGGAAGGAAGCAGCTGGGACAATGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS GCA 72 bp | AATATCTTCAAGCCGTTTCTGTATTGCTTCGGGAGTTaGCCTCAGCTTTGTCCTCTTTTCACCGGAAACATG | + |
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Preference number: 6 (lower is better) Translates to: NIFKPFLYCFGS*PQLCPLFTGNM Trigger: CATGTTTCCGGTGAAAAGAGGACAAAGCTGAGGGCAACTCCCGAAGCAATACAGAAACGGCTTGAAGATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS TCA 72 bp | CTGTCTTCAGTACCATTCGTGGTAGTGCCACTGAGTTaGAAATTGTCAAGTACTCCCAGTGAAAATAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSVPFVVVPLS*KLSSTPSENSR Trigger: CCTGCTATTTTCACTGGGAGTACTTGACAATTTTCAACTCAGTGGCACTACCACGAATGGTACTGAAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087400.12 |
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| CDS GCA 72 bp | ATTGGTTGCTTCAGCGTCTTAGGCCCAGTCCAATATTaGTCAGTTGGAAAATCAATAAGCTTTGCCACATGG | + |
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Preference number: 6 (lower is better) Translates to: IGCFSVLGPVQY*SVGKSISFATW Trigger: CCATGTGGCAAAGCTTATTGATTTTCCAACTGAGCAATATTGGACTGGGCCTAAGACGCTGAAGCAACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CCA 72 bp | TCATTGAGCCCTAATTCCCTGAGAGAAGCAGTTTCCTaGTCTTTTTCATGTAGTGTCTGGAACTGGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: SLSPNSLREAVS*SFSCSVWNWDK Trigger: TTTGTCCCAGTTCCAGACACTACATGAAAAAGACCAGGAAACTGCTTCTCTCAGGGAATTAGGGCTCAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 72 bp | TATTGGTTGCTTCAGCGTCTTAGGCCCAGTCCAATATaGCTCAGTTGGAAAATCAATAAGCTTTGCCACATG | + |
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Preference number: 6 (lower is better) Translates to: YWLLQRLRPSPI*LSWKINKLCHM Trigger: CATGTGGCAAAGCTTATTGATTTTCCAACTGAGCAATATTGGACTGGGCCTAAGACGCTGAAGCAACCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS GCA 72 bp | GATTCTTTCTTTAATATCTTCAAGCCGTTTCTGTATTaGTTCGGGAGTTGCCCTCAGCTTTGTCCTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DSFFNIFKPFLY*FGSCPQLCPLF Trigger: GAAAAGAGGACAAAGCTGAGGGCAACTCCCGAAGCAATACAGAAACGGCTTGAAGATATTAAAGAAAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033810.8 ENSMUST00000087400.12 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 90 bp | CAATATTTTCCCATAGAGTTTATATCCATTAATTTGGTGCAGTGCTaGCCATGCTATGTCTTTATTGGGAAAGGTGAGGAAAGCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QYFPIEFISINLVQC*PCYVFIGKGEESLP Trigger: GGGCAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTCTATGGGAAAATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS GCA 72 bp | GAGTTTATATCCATTAATTTGGTGCAGTGCTTGCCATaGTATGTCTTTATTGGGAAAGGTGAGGAAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: EFISINLVQCLP*YVFIGKGEESL Trigger: CAAGCTTTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 72 bp | CCCATAGAGTTTATATCCATTAATTTGGTGCAGTGCTaGCCATGCTATGTCTTTATTGGGAAAGGTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PIEFISINLVQC*PCYVFIGKGEE Trigger: TTCCTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 72 bp | TCTTCCTCTTCATTGAGGTCATGTACTTGTCTGCACTaGTCTTTTTGTGGTATGCTTGGTAATAAAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSLRSCTCLH*SFCGMLGNKEP Trigger: AGGCTCTTTATTACCAAGCATACCACAAAAAGACAAGTGCAGACAAGTACATGACCTCAATGAAGAGGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113011.9 |
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| CDS GCA 72 bp | TTTCCCATAGAGTTTATATCCATTAATTTGGTGCAGTaGTTGCCATGCTATGTCTTTATTGGGAAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FPIEFISINLVQ*LPCYVFIGKGE Trigger: CTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTCTATGGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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| CDS CAA 90 bp | AAACTCTATCACCAATATTTTCCCATAGAGTTTATATCCATTAATTaGGTGCAGTGCTTGCCATGCTATGTCTTTATTGGGAAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: KLYHQYFPIEFISIN*VQCLPCYVFIGKGE Trigger: CTCACCTTTCCCAATAAAGACATAGCATGGCAAGCACTGCACCAAATTAATGGATATAAACTCTATGGGAAAATATTGGTGATAGAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033810.8 ENSMUST00000113007.8 ENSMUST00000113011.9 |
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