Pregenerated sensors for RBM38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027510Ensembl transcript IDs: ENSMUST00000029014.16, ENSMUST00000173393.8, ENSMUST00000173720.2, ENSMUST00000173878.8, ENSMUST00000173979.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTaGTGCCTTCAGGGCAGGTGGGCCCGGGGGCCTGAGGAGACCCAA | + |
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Preference number: 1 (lower is better) Translates to: LRPFLKHGRAAEETC*CLQGRWARGPEETQ Trigger: TTGGGTCTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | GAGCCCAGGGCCCTGCAGGGCCGTGGTCTGGTAATGGCAGCCCTGTaGGGAGGGGGAGCTCCATCAGCGACACTGGCACAGAGAATACTG | + |
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Preference number: 1 (lower is better) Translates to: EPRALQGRGLVMAAL*GGGAPSATLAQRIL Trigger: CAGTATTCTCTGTGCCAGTGTCGCTGATGGAGCTCCCCCTCCCCACAGGGCTGCCATTACCAGACCACGGCCCTGCAGGGCCCTGGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR TCA 90 bp | AGAAGAAACTTGCTGCTGCCTTCAGGGCAGGTGGGCCCGGGGGCCTaGGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: RRNLLLPSGQVGPGA*GDPNGGGSRGWQVA Trigger: TGCCACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR TCA 90 bp | GGCCCTGGGCAGGACGCGCATCACTGCATCCTGTCAGGCTGTAGCTaGGGTGCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GPGQDAHHCILSGCS*GAWYCTKVVPAGAA Trigger: TGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGCACCTCAGCTACAGCCTGACAGGATGCAGTGATGCGCGTCCTGCCCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR GCA 90 bp | AGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTaGCTTCAGGGCAGGTGGGCCCGGGGGCCTGAGGAGACCCAAATG | + |
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Preference number: 1 (lower is better) Translates to: RPFLKHGRAAEETCC*LQGRWARGPEETQM Trigger: CATTTGGGTCTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | GGCAGAGCCTGCTTGAGGGGCACAGGGCCAGGAAGAAGGCCCCCATaGCACAGCAACAGACACCTGAGAACTCGCCCTGATGGGCACCTC | + |
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Preference number: 1 (lower is better) Translates to: GRACLRGTGPGRRPP*HSNRHLRTRPDGHL Trigger: GAGGTGCCCATCAGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTGGCCCTGTGCCCCTCAAGCAGGCTCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR TCA 90 bp | GGCAGCAGGGTAGCCGTAGCCCACGAAGCTGGTGGCTGCAGCAGGTaGGGCAGCATATGGGTACTGGTCGTAAGTGGCTGGCGGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: GSRVAVAHEAGGCSR*GSIWVLVVSGWRVL Trigger: CAGTACCCGCCAGCCACTTACGACCAGTACCCATATGCTGCCTCACCTGCTGCAGCCACCAGCTTCGTGGGCTACGGCTACCCTGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | GCATCCTGTCAGGCTGTAGCTGAGGTGCCTGGTACTGCACGAAGGTaGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGGGCACGGCAG | + |
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Preference number: 1 (lower is better) Translates to: ASCQAVAEVPGTARR*CLQVQQQTRLGARQ Trigger: CTGCCGTGCCCCAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGCACCTCAGCTACAGCCTGACAGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | CGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTaGTGGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: RDRGGRDHHAGLHNG*WVDVVRSQPVGALD Trigger: ATCCAGCGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR CCA 90 bp | GTGACGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCT | + |
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Preference number: 1 (lower is better) Translates to: VTGQGWQGSPRWAAQ*LVGRCSEESARRCA Trigger: AGCGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR TCA 90 bp | GTAGGCTGGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTaGCGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAAT | + |
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Preference number: 1 (lower is better) Translates to: VGWAGWCILKVGRGQ*RDRGGRDHHAGLHN Trigger: ATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | GGTACTGGTCGTAAGTGGCTGGCGGGTACTGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTGACGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: GTGRKWLAGTGRRLG*LVYTQGRARTVTGQ Trigger: CTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCCAGTACCCGCCAGCCACTTACGACCAGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | CTGGTGTATACTCAAGGTAGGGCGAGGACAGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTGGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: LVYTQGRARTVTGQG*QGSPRWAAQWLVGR Trigger: TCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR CCA 90 bp | GACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTaGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCTGGATCAA | + |
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Preference number: 1 (lower is better) Translates to: DRGGRDHHAGLHNGW*VDVVRSQPVGALDQ Trigger: TTGATCCAGCGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR CCA 90 bp | GGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCTGGATCAAGGTaGGGTGTAGTTGCTGCACACCAACAGCAAAGCCCGTCTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: GRCSEESARRCAGSR*GVVAAHQQQSPSVS Trigger: GCTTACAGACGGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCACCTTGATCCAGCGCACCTACGGGCTGACTCCTCACTACATCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR TCA 90 bp | CCATCAGCGACACTGGCACAGAGAATACTGTCATTGTCTCCACAGTaGACTACTGACCAAAGCCAGTCTCTAAGTACAAAACAGGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: PSATLAQRILSLSPQ*TTDQSQSLSTKQVW Trigger: CCAAACCTGTTTTGTACTTAGAGACTGGCTTTGGTCAGTAGTTCACTGTGGAGACAATGACAGTATTCTCTGTGCCAGTGTCGCTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCCTGCAGGGCCGTGGTCTGGTAATGGCAGCCCTGTGGGGAGGGGGAGCTGGTGGCTCCAGAGGCTaGCAGGTGGCAGCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RALQGRGLVMAALWGGGAGGSRG*QVAAVA Trigger: GGCCACAGCTGCCACCTGCCAGCCTCTGGAGCCACC...AGCTCCCCCTCCCCACAGGGCTGCCATTACCAGACCACGGCCCTGCAGGGCCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGGCCCTGGGCAGGACGCGCATCACTGCATCCTGTCAGGCTGTAGCTGAGTGCCTTCAGGGCAGGTaGGCCCGGGGGCCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AVALGRTRITASCQAVAECLQGR*ARGPEE Trigger: CTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCA...CTCAGCTACAGCCTGACAGGATGCAGTGATGCGCGTCCTGCCCAGGGCCACAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCCGGGGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGCTGGTCGTAAGTGGCTaGCGGGTACTGGGCGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: WARGPEETQMVVAPEAGRLVVSG*RVLGVG Trigger: GCCTACGCCCAGTACCCGCCAGCCACTTACGACCAG...CCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCCGGGGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGGGTACTGGTCGTAAGTaGCTGGCGGGTACTGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: WARGPEETQMVVAPEAGRGTGRK*LAGTGR Trigger: ACGCCCAGTACCCGCCAGCCACTTACGACCAGTACC...CCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGAGGCAGCATATGGGTACTGGTCGTAAGTGGCTGGCGGGTACTGGGCGTGGCAGGTGGCAGCTGTaGCCCTGGGCAGGACGCGCA | + |
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Preference number: 2 (lower is better) Translates to: QVRQHMGTGRKWLAGTGRGRWQL*PWAGRA Trigger: TGCGCGTCCTGCCCAGGGCCACAGCTGCCACCTGCC...ACGCCCAGTACCCGCCAGCCACTTACGACCAGTACCCATATGCTGCCTCACCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAACAGGCATGCTGTGGAGTTCCCGCCCGCACACTGGCTCCCTGAGGTAGGTTGCCTTCAGGGCAGGTaGGCCCGGGGGCCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TNRHAVEFPPAHWLPEVGCLQGR*ARGPEE Trigger: CTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCA...ACCTACCTCAGGGAGCCAGTGTGCGGGCGGGAACTCCACAGCATGCCTGTTAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTTGCCTTCAGGGCAGGTaGGCCCGGGGGCCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VPGTARRWCLQVQQQTRLCLQGR*ARGPEE Trigger: CTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCA...AAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTGACGGGACAGGTAGGGCGAGGACAGTaGCGGGACAGGGGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RLGWLVYTQGRARTVTGQVGRGQ*RDRGGR Trigger: CCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTAC...CTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTGTGGCAGGTGGCAGCTGTaGCCCTGGGCAGGACGCGCA | + |
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Preference number: 2 (lower is better) Translates to: PRVKAPGTEWLQSFQSECGRWQL*PWAGRA Trigger: TGCGCGTCCTGCCCAGGGCCACAGCTGCCACCTGCC...ACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTGGCAGGTGGCAGCTGTaGCCCTGGGCAGGACGCGCA | + |
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Preference number: 2 (lower is better) Translates to: CPFLLRPFLKHGRAAEETGRWQL*PWAGRA Trigger: TGCGCGTCCTGCCCAGGGCCACAGCTGCCACCTGCC...AGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTGTTGCCTTCAGGGCAGGTaGGCCCGGGGGCCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PRVKAPGTEWLQSFQSECCLQGR*ARGPEE Trigger: CTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCA...ACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGGTAATGGCAGCCCTGTaGGGAGGGGGAGCTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: LRAAHAARDTHSSPPRRGVMAAL*GGGAPS Trigger: TGATGGAGCTCCCCCTCCCCACAGGGCTGCCATTAC...CCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGGGCACGGCACTGGTCGTAAGTGGCTaGCGGGTACTGGGCGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: CTKVVPAGAAADKAWGTALVVSG*RVLGVG Trigger: GCCTACGCCCAGTACCCGCCAGCCACTTACGACCAG...TGCCGTGCCCCAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PFLLRPFLKHGRAAEETCVTGQG*QGSPRW Trigger: CCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCAC...GCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173979.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAACAGGCATGCTGTGGAGTTCCCGCCCGCACACTGGCTCCCTGAGGTAGGTCCTGCGGGCAGCCCATaGTGCCAGAGATACCCACTC | + |
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Preference number: 2 (lower is better) Translates to: TNRHAVEFPPAHWLPEVGPAGSP*CQRYPL Trigger: GAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCAGG...ACCTACCTCAGGGAGCCAGTGTGCGGGCGGGAACTCCACAGCATGCCTGTTAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGTGGGGTGTAGTTGCTGCACACCAACAGCAAAGCCCGTCTGTAAGCTCCGGCAGGTGGCAGCTGTaGCCCTGGGCAGGACGCGCA | + |
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Preference number: 2 (lower is better) Translates to: SRWGVVAAHQQQSPSVSSGRWQL*PWAGRA Trigger: TGCGCGTCCTGCCCAGGGCCACAGCTGCCACCTGCC...GGAGCTTACAGACGGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCACCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173878.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTGGCAGCTGTGGCAGACCCAAATGGTGGTaGCTCCAGAGGCTGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LRRPKWWWLQRLAGGSCGRPKWW*LQRLAG Trigger: ACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCT...GCCACAGCTGCCACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGGGCACGGCAAGACCCAAATGGTGGTaGCTCCAGAGGCTGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: CTKVVPAGAAADKAWGTARPKWW*LQRLAG Trigger: ACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCT...TGCCGTGCCCCAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGTGGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCTGGATCAAGGGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGG | + |
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Preference number: 2 (lower is better) Translates to: WLVGRCSEESARRCAGSRVTGQG*QGSPRW Trigger: CCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCAC...CCTTGATCCAGCGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGACGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SDGTGVAGITTLGCTMAGGRRLG*LVYTQG Trigger: ACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCC...ACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGACGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTGTACTGGGCGTAGGCTaGGCTGGCTGGTGTATACTC | + |
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Preference number: 2 (lower is better) Translates to: SDGTGVAGITTLGCTMAGVLGVG*AGWCIL Trigger: GAGTATACACCAGCCAGCCCAGCCTACGCCCAGTAC...ACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGGGCGGTACTGCACGAAGGTaGTGCCTGCAGGTGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WYCTKVVPAGAAADKAWGGTARR*CLQVQQ Trigger: CTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACC...GCCCCAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGTGTGGAGGGACCCACTGCCCAGCCTGCGGGCAGCCCATGCTGCCAGAGTCCACAGTGAACTACTaGCCAAAGCCAGTCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: GRCGGTHCPACGQPMLPESTVNY*PKPVSK Trigger: CTTAGAGACTGGCTTTGGTCAGTAGTTCACTGTGGA...CTCTGGCAGCATGGGCTGCCCGCAGGCTGGGCAGTGGGTCCCTCCACACCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTAGACGTGGGCTGGACCTTCTCTCTGTGCAGCTAGGTCAGACTGGCACACCTGAGAACTCGCCCTaGTGGGCACCTCTGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PPRRGLDLLSVQLGQTGTPENSP*WAPLQV Trigger: CACCTGCAGAGGTGCCCATCAGGGCGAGTTCTCAGG...TGTGCCAGTCTGACCTAGCTGCACAGAGAGAAGGTCCAGCCCACGTCTAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGGCTGTAGCTGAGGTGCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGACTGCACGAAGGTGGTaGCTGCAGGTGCAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CQAVAEVPGTARRWCLQVTARRW*LQVQQQ Trigger: CTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGT...CACCTGCAGGCACCACCTTCGTGCAGTACCAGGCACCTCAGCTACAGCCTGACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGACGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTGTGGGGTGTAGTTGCTaGACACCAACAGCAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SDGTGVAGITTLGCTMAGVGCSC*TPTAKP Trigger: GGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCAC...ACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTGACGGGACAGGGGAGGAGACCCAAATGGTaGTGGCTCCAGAGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LGWLVYTQGRARTVTGQGRRPKW*WLQRLA Trigger: TGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCT...CCCCTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTGTGGCCCTGGGCAGGACGCGCATCACTGCATCCTGTCAGGCTGTAGCTCGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: AAVALGRTRITASCQAVARWAAQ*LVGRCS Trigger: ACTACATCTACCCACCAGCCATTGTGCAGCCCAGCG...AGCTACAGCCTGACAGGATGCAGTGATGCGCGTCCTGCCCAGGGCCACAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTGAGGCAGCATATGGGTACTGGTCGTAAGTGGCTGGCGGGTACTGGGCGTCAGGGATCACCACGCTaGGCTGCACAATGGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QVRQHMGTGRKWLAGTGRQGSPR*AAQWLV Trigger: CACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTG...ACGCCCAGTACCCGCCAGCCACTTACGACCAGTACCCATATGCTGCCTCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCAGGCTGTAGCTGAGGTGCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGGGTACTGGTCGTAAGTaGCTGGCGGGTACTGGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: CQAVAEVPGTARRWCLQVGTGRK*LAGTGR Trigger: ACGCCCAGTACCCGCCAGCCACTTACGACCAGTACC...CACCTGCAGGCACCACCTTCGTGCAGTACCAGGCACCTCAGCTACAGCCTGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGACGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTTGCGCTGGATCAAGGTaGGGTGTAGTTGCTGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: SDGTGVAGITTLGCTMAGCAGSR*GVVAAH Trigger: GTGTGCAGCAACTACACCCCACCTTGATCCAGCGCA...ACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTGTGGGGAGGGGGAGCTCCATCAGCGACACTGGCACAGAGAATACTGTGAAGAAACTTGCTGCTaGCTTCAGGGCAGGTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QPCGEGELHQRHWHREYCEETCC*LQGRWA Trigger: GGCCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTC...ACAGTATTCTCTGTGCCAGTGTCGCTGATGGAGCTCCCCCTCCCCACAGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAAGGCCCCCATGGCACAGCAACAGACACCTGAGAACTCGCCCTGATGGGGAAGAAACTTGCTGCTaGCTTCAGGGCAGGTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GRRPPWHSNRHLRTRPDGEETCC*LQGRWA Trigger: GGCCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTC...CCCATCAGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGCCAGGAAGAAGGCCCCCATGGCACAGCAACAGACACCTGAGAACTCGCAGACCCAAATGGTGGTaGCTCCAGAGGCTGGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TGPGRRPPWHSNRHLRTRRPKWW*LQRLAG Trigger: ACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCT...GCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTGGCCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGGCCAGGAAGAAGGCCCCCATGGCACAGCAACAGACACCTGAGAACTCGAGGAGACCCAAATGGTaGTGGCTCCAGAGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: HRARKKAPMAQQQTPENSRRPKW*WLQRLA Trigger: TGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCT...CGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTGGCCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTGACGGGACAGAGGAGACCCAAATGGTaGTGGCTCCAGAGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RLGWLVYTQGRARTVTGQRRPKW*WLQRLA Trigger: TGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCT...CTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTGACGGGACAGGGGCGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LGWLVYTQGRARTVTGQGRWAAQ*LVGRCS Trigger: ACTACATCTACCCACCAGCCATTGTGCAGCCCAGCG...CCCCTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGAGGAGGGAGGACGTCTGTACACGTCCCAGAGTTAAGGCACCTGGCACGGCAGGGATCACCACGCTaGGCTGCACAATGGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QRGGRTSVHVPELRHLARQGSPR*AAQWLV Trigger: CACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTG...CCGTGCCAGGTGCCTTAACTCTGGGACGTGTACAGACGTCCTCCCTCCTCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGGTGGGGTGTAGTTGCTGCACACCAACAGCAAAGCCCGTCTGTAAGCTCCGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRWGVVAAHQQQSPSVSSVTGQG*QGSPRW Trigger: CCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCAC...GGAGCTTACAGACGGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCACCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGTGGCTGGCGGGTACTGGGCGTAGGCTGGGCTGGCTGGTGTATACTCAAGGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VSGWRVLGVGWAGWCILKGRRLG*LVYTQG Trigger: ACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCC...CTTGAGTATACACCAGCCAGCCCAGCCTACGCCCAGTACCCGCCAGCCACTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VPGTARRWCLQVQQQTRLGRRLG*LVYTQG Trigger: ACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCC...AAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGCAGAAGAAACTTGCTaGTGCCTTCAGGGCAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VPGTARRWCLQVQQQTRLAEETC*CLQGRW Trigger: CCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGC...AAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173979.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGGCCAGGAAGAAGGCCCCCATGGCACAGCAACAGACACCTGAGAACTCGCCAAGCACGGCAGGGCTaGAGAAGAAACTTGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TGPGRRPPWHSNRHLRTRQARQG*RRNLLL Trigger: CAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTG...GCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTGGCCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTGGGTAGATGTAGTGGTGGGGTGTAGTTGCTaGACACCAACAGCAAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GGRDHHAGLHNGWWVDVVVGCSC*TPTAKP Trigger: GGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCAC...CACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAAGACCCAAATGGTGGTaGCTCCAGAGGCTGGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: QALPQARQGCRRNLLLPSRPKWW*LQRLAG Trigger: ACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCT...TGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTAGGAGACCCAAATGGTaGTGGCTCCAGAGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CPFLLRPFLKHGRAAEETRRPKW*WLQRLA Trigger: TGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCT...AGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAGGAAGAAGGCCCCCATGGCACAGCAACAGACACCTGAGAACTCGCCCTATTCCCAGCAGGACATaGCACAGTGCTTCGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GPGRRPPWHSNRHLRTRPIPSRT*HSASTE Trigger: CTCAGTCGAAGCACTGTGCCATGTCCTGCTGGGAAT...AGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCGGGCTGCACAATGGCTaGTGGGTAGATGTAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PFLLRPFLKHGRAAEETCGLHNG*WVDVVR Trigger: CCTCACTACATCTACCCACCAGCCATTGTGCAGCCC...GCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAATGGCTGGTGGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCTGGAGTACTGGGCGTAGGCTaGGCTGGCTGGTGTATACTC | + |
|
Preference number: 2 (lower is better) Translates to: AQWLVGRCSEESARRCAGVLGVG*AGWCIL Trigger: GAGTATACACCAGCCAGCCCAGCCTACGCCCAGTAC...TCCAGCGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGCAGAAGAAACTTGCTaGTGCCTTCAGGGCAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RPFLKHGRAAEETCCCLQAEETC*CLQGRW Trigger: CCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGC...CTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTGTCCAAGCACGGCAGGGCTaGAGAAGAAACTTGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PELRHLARSGCRASRVSVQARQG*RRNLLL Trigger: CAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTG...GACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGCTGGTGGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCGCTGGATCAACAGGGATCACCACGCTaGGCTGCACAATGGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NGWWVDVVRSQPVGALDQQGSPR*AAQWLV Trigger: CACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTG...TTGATCCAGCGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR CCA 90 bp | ACACGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTATTCCCAGCAGGACATaGCACAGTGCTTCGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TRPRVKAPGTEWLQSFQSIPSRT*HSASTE Trigger: CTCAGTCGAAGCACTGTGCCATGTCCTGCTGGGAAT...ACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR CCA 90 bp | GATCACCACGCTGGGCTGCACAATGGCTGGTGGGTAGATGTAGTGAGGAGTCAGCGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: DHHAGLHNGWWVDVVRSQRWAAQ*LVGRCS Trigger: ACTACATCTACCCACCAGCCATTGTGCAGCCCAGCG...CTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR CCA 90 bp | GATCACCACGCTGGGCTGCACAATGGCTGGTGGGTAGATGTAGTGAGGAGTCAGTGCGCTGGATCAAGGTaGGGTGTAGTTGCTGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: DHHAGLHNGWWVDVVRSQCAGSR*GVVAAH Trigger: GTGTGCAGCAACTACACCCCACCTTGATCCAGCGCA...CTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTCCACAGTGAACTACTaGCCAAAGCCAGTCTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: RPRVKAPGTEWLQSFQSESTVNY*PKPVSK Trigger: CTTAGAGACTGGCTTTGGTCAGTAGTTCACTGTGGA...CTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGTCTTGCCTGCATGGCAGAAAATTCCCAGCAGGACATGGCACAGTGCTTCGCTGCAGAAGAAACTTaGTGCTGCCTTCAGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DGLACMAENSQQDMAQCFAAEET*CCLQGR Trigger: CCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGC...GAAGCACTGTGCCATGTCCTGCTGGGAATTTTCTGCCATGCAGGCAAGACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGTCTTGCCTGCATGGCAGAAAATTCCCAGCAGGACATGGCACAGTGCTTCTCATTGTCTCCACAGTaGACTACTGACCAAAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: DGLACMAENSQQDMAQCFSLSPQ*TTDQSQ Trigger: CTGGCTTTGGTCAGTAGTTCACTGTGGAGACAATGA...GAAGCACTGTGCCATGTCCTGCTGGGAATTTTCTGCCATGCAGGCAAGACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR TCA 72 bp | TTGCTGCTGCCTTCAGGGCAGGTGGGCCCGGGGGCCTaGGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLPSGQVGPGA*GDPNGGGSRGW Trigger: CCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCAGCAGCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
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| 3UTR GCA 72 bp | GCACAGGTGACAACGGGAGGGTGGGTGGGCAGAGCCTaGTTGAGGGGCACAGGGCCAGGAAGAAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AQVTTGGWVGRA*LRGTGPGRRPP Trigger: TGGGGGCCTTCTTCCTGGCCCTGTGCCCCTCAAGCAGGCTCTGCCCACCCACCCTCCCGTTGTCACCTGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| 3UTR TCA 72 bp | CACCTGAGAACTCGCCCTGATGGGCACCTCTGCAGGTaGGGCGGGCAGCATCAGCAGACAGGAGCCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLRTRPDGHLCR*GGQHQQTGAQG Trigger: GCCCTGGGCTCCTGTCTGCTGATGCTGCCCGCCTCACCTGCAGAGGTGCCCATCAGGGCGAGTTCTCAGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR GCA 72 bp | TTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTaGTGCCTTCAGGGCAGGTGGGCCCGGGGGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLKHGRAAEETC*CLQGRWARGPE Trigger: CTCAGGCCCCCGGGCCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR TCA 72 bp | GCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTaGCGGGACAGGGGTGGCAGGGATCACCACGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AGWCILKVGRGQ*RDRGGRDHHAG Trigger: CCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | ACTCAAGGTAGGGCGAGGACAGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGGGCTGCACAATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TQGRARTVTGQG*QGSPRWAAQWL Trigger: CAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTACCTTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCCCTGCAGGGCCGTGGTCTGGTAATGGCAGCCCTGTGGGGAGGGGGAGCTCGGTGCTGATGGTCTaGCCTGCATGGCAGAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QGPAGPWSGNGSPVGRGSSVLMV*PAWQKI Trigger: AATTTTCTGCCATGCAGGCAAGACCATCAGCACCGA...GCTCCCCCTCCCCACAGGGCTGCCATTACCAGACCACGGCCCTGCAGGGCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR TCA 72 bp | CCCATGGCACAGCAACAGACACCTGAGAACTCGCCCTaGTGGGCACCTCTGCAGGTGAGGCGGGCAGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PMAQQQTPENSP*WAPLQVRRAAS Trigger: TGATGCTGCCCGCCTCACCTGCAGAGGTGCCCATCAGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR CCA 72 bp | CGTAAGTGGCTGGCGGGTACTGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGTAGGGCGAGGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RKWLAGTGRRLG*LVYTQGRARTV Trigger: CACTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCCAGTACCCGCCAGCCACTTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | CTGGTCGTAAGTGGCTGGCGGGTACTGGGCGTAGGCTaGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVVSGWRVLGVG*AGWCILKVGRG Trigger: TCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCCAGTACCCGCCAGCCACTTACGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | CAGGCTGTAGCTGAGGTGCCTGGTACTGCACGAAGGTaGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QAVAEVPGTARR*CLQVQQQTRLG Trigger: CCCAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGCACCTCAGCTACAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | GGCAGGGATCACCACGCTGGGCTGCACAATGGCTGGTaGGTAGATGTAGTGAGGAGTCAGCCCGTAGGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: GRDHHAGLHNGW*VDVVRSQPVGA Trigger: CGCACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
||
| 3UTR CCA 72 bp | CAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGTGAGGAGTCAGCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: QGWQGSPRWAAQ*LVGRCSEESAR Trigger: ACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
||
| 3UTR TCA 72 bp | CAGGAAGAAGGCCCCCATGGCACAGCAACAGACACCTaGGAACTCGCCCTGATGGGCACCTCTGCAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QEEGPHGTATDT*ELALMGTSAGE Trigger: CTCACCTGCAGAGGTGCCCATCAGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR TCA 72 bp | GTAGCCGTAGCCCACGAAGCTGGTGGCTGCAGCAGGTaGGGCAGCATATGGGTACTGGTCGTAAGTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VAVAHEAGGCSR*GSIWVLVVSGW Trigger: CCAGCCACTTACGACCAGTACCCATATGCTGCCTCACCTGCTGCAGCCACCAGCTTCGTGGGCTACGGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR GCA 72 bp | CTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTaGAGAAGAAACTTGCTGCTGCCTTCAGGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPPQALPQARQG*RRNLLLPSGQV Trigger: CACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | TGCTTGAGGGGCACAGGGCCAGGAAGAAGGCCCCCATaGCACAGCAACAGACACCTGAGAACTCGCCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CLRGTGPGRRPP*HSNRHLRTRPD Trigger: ATCAGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCATGGGGGCCTTCTTCCTGGCCCTGTGCCCCTCAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR CCA 72 bp | ACAGTGACGGGACAGGGGTGGCAGGGATCACCACGCTaGGCTGCACAATGGCTGGTGGGTAGATGTAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TVTGQGWQGSPR*AAQWLVGRCSE Trigger: CTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | GGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTaGTGGGTAGATGTAGTGAGGAGTCAGCCCGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGRDHHAGLHNG*WVDVVRSQPVG Trigger: ACCTACGGGCTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGGGCTGCAGAAGAAACTaGCTGCTGCCTTCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HVPELRHLARSGCRASRVGCRRN*LLPSGQ Trigger: CTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCC...CACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR GCA 72 bp | CACGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTaGAGAGCTTCCAGAGTGAGTGTCCCTTCCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVPELRHLARSG*RASRVSVPSSS Trigger: TGAGGAGGAAGGGACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | AGTGAGGAGTCAGCCCGTAGGTGCGCTGGATCAAGGTaGGGTGTAGTTGCTGCACACCAACAGCAAAGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SEESARRCAGSR*GVVAAHQQQSP Trigger: CGGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCACCTTGATCCAGCGCACCTACGGGCTGACTCCTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGGCTGCAGAAGAAACTaGCTGCTGCCTTCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TRPRVKAPGTEWLQSFQSGCRRN*LLPSGQ Trigger: CTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCC...ACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | TGTACACGTCCCAGAGTTAAGGCACCTGGCACGGAGTaGCTGCAGAGCTTCCAGAGTGAGTGTCCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CTRPRVKAPGTE*LQSFQSECPFL Trigger: GAGGAAGGGACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACGTGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR CCA 72 bp | CAGCCCTGTGGGGAGGGGGAGCTCCATCAGCGACACTaGCACAGAGAATACTGTCATTGTCTCCACAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QPCGEGELHQRH*HREYCHCLHSE Trigger: TTCACTGTGGAGACAATGACAGTATTCTCTGTGCCAGTGTCGCTGATGGAGCTCCCCCTCCCCACAGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGTCGGTGCTGATGGTCTaGCCTGCATGGCAGAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: RPFLKHGRAAEETCCCLQSVLMV*PAWQKI Trigger: AATTTTCTGCCATGCAGGCAAGACCATCAGCACCGA...CTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173979.2 |
||
| 3UTR TCA 72 bp | ATTATTATAACATTACTCCCTCTGTCCTCCAGGCCTTaGCTAACAGGCATGCTGTGGAGTTCCCGCCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IIITLLPLSSRP*LTGMLWSSRPH Trigger: GTGCGGGCGGGAACTCCACAGCATGCCTGTTAGTCAAGGCCTGGAGGACAGAGGGAGTAATGTTATAATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR TCA 72 bp | ACACTGGCACAGAGAATACTGTCATTGTCTCCACAGTaGACTACTGACCAAAGCCAGTCTCTAAGTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLAQRILSLSPQ*TTDQSQSLSTK Trigger: TTTTGTACTTAGAGACTGGCTTTGGTCAGTAGTTCACTGTGGAGACAATGACAGTATTCTCTGTGCCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| 3UTR TCA 72 bp | ACAGAGAATACTGTCATTGTCTCCACAGTGAACTACTaGCCAAAGCCAGTCTCTAAGTACAAAACAGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TENTVIVSTVNY*PKPVSKYKTGL Trigger: CAAACCTGTTTTGTACTTAGAGACTGGCTTTGGTCAGTAGTTCACTGTGGAGACAATGACAGTATTCTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCGGGGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTCTGTGAGCCGTGCATaGCGCTGGGGGCGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: WARGPEETQMVVAPEAGRSVSRA*RWGRRT Trigger: CGTCCGCCGCCCCCAGCGCCATGCACGGCTCACAGA...CCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173878.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCCCGGGGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGCGTGGTGTCCTTCTGTaGGCCGTGCATGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WARGPEETQMVVAPEAGRRGVLL*AVHGAG Trigger: CCCAGCGCCATGCACGGCTCACAGAAGGACACCACG...CCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 ENSMUST00000173878.8 |
||
| CDS-3UTR TCA 90 bp | CTGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGGTAGGGCGAGGACAGTaGCGGGACAGGGGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAAHAARDTHSSPPRRGVGRGQ*RDRGGR Trigger: CCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTAC...CCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGACGGGACAGGGGTGGCAGGGATCACCACGCTGGGCTGCACAATGGCTGTCTGTGAGCCGTGCATaGCGCTGGGGGCGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TVTGQGWQGSPRWAAQWLSVSRA*RWGRRT Trigger: CGTCCGCCGCCCCCAGCGCCATGCACGGCTCACAGA...CAGCCATTGTGCAGCCCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCACTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173878.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGGTGTGGAGGGACCCACTGCCCAGCCTGCGGGCAGCCCATGCTGCCAGAGCTGTCAGGCTGTAGCTaGGGTGCCTGGTACTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GRCGGTHCPACGQPMLPELSGCS*GAWYCT Trigger: CGTGCAGTACCAGGCACCTCAGCTACAGCCTGACAG...CTCTGGCAGCATGGGCTGCCCGCAGGCTGGGCAGTGGGTCCCTCCACACCTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGGGCCCGGGGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGCAGGGATCACCACGCTaGGCTGCACAATGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGGPGGLRRPKWWWLQRLQGSPR*AAQWLV Trigger: CACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTG...CAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCCCCGGGCCCACCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGCTGGACCTTCTCTCTGTGCTCTGTGAGCCGTGCATaGCGCTGGGGGCGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PEIPTPPLLDVGWTFSLCSVSRA*RWGRRT Trigger: CGTCCGCCGCCCCCAGCGCCATGCACGGCTCACAGA...GCACAGAGAGAAGGTCCAGCCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGCAGCCCACGAAGCTGGTaGCTGCAGCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGQPMLPEIPTPPLLDVGSPRSW*LQQVRQ Trigger: CTGCCTCACCTGCTGCAGCCACCAGCTTCGTGGGCT...GCCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGAGCCCACGAAGCTGGTaGCTGCAGCAGGTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACGQPMLPEIPTPPLLDVSPRSW*LQQVRQ Trigger: CTGCCTCACCTGCTGCAGCCACCAGCTTCGTGGGCT...CACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCGTAGGGCGAGGACAGTaGCGGGACAGGGGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLLRPFLKHGRAAEETCVGRGQ*RDRGGR Trigger: CCTGCCACCCCTGTCCCGTCACTGTCCTCGCCCTAC...GCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTGGCAGCTGGAGTCAGCCCGTAGGTaGGCTGGATCAAGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPEETQMVVAPEAGRWQLESARR*AGSRWG Trigger: ACCCCACCTTGATCCAGCGCACCTACGGGCTGACTC...CAGCTGCCACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGCCCTGGGCAGGACGCGCATCACTGCATCCTGTCAGGCTGTAGCTGAGCCATGGTCACCGGTCTaGCGGTCGGTGATGACCACG | + |
|
Preference number: 4 (lower is better) Translates to: AVALGRTRITASCQAVAEPWSPV*RSVMTT Trigger: CGTGGTCATCACCGACCGCCAGACCGGTGACCATGG...CTCAGCTACAGCCTGACAGGATGCAGTGATGCGCGTCCTGCCCAGGGCCACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173878.8 |
||
| CDS-3UTR TCA 90 bp | CGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGCGTGGTGTCCTTCTGTaGGCCGTGCATGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKAPGTEWLQSFQSERGVLL*AVHGAG Trigger: CCCAGCGCCATGCACGGCTCACAGAAGGACACCACG...CTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR GCA 90 bp | TGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGCCACGAAGGTGGTGCCTaGAGGTGCAGCAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: CGQPMLPEIPTPPLLDVGHEGGA*RCSSRQ Trigger: TTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTG...GCCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGCACGAAGGTGGTGCCTaGAGGTGCAGCAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ACGQPMLPEIPTPPLLDVHEGGA*RCSSRQ Trigger: TTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTG...CACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLPPQALPQARQGCRRNVTGQG*QGSPRW Trigger: CCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCAC...GTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | CGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGGTGACGGGACAGGGGTaGCAGGGATCACCACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKAPGTEWLQSFQSEVTGQG*QGSPRW Trigger: CCAGCGTGGTGATCCCTGCCACCCCTGTCCCGTCAC...CTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGCGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CGQPMLPEIPTPPLLDVGGRRLG*LVYTQG Trigger: ACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCC...GCCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCGGGCAGCCCATGCTGCCAGAGATACCCACTCCTCCCCTCCTAGACGTGGTACTGGGCGTAGGCTaGGCTGGCTGGTGTATACTC | + |
|
Preference number: 4 (lower is better) Translates to: ACGQPMLPEIPTPPLLDVVLGVG*AGWCIL Trigger: GAGTATACACCAGCCAGCCCAGCCTACGCCCAGTAC...CACGTCTAGGAGGGGAGGAGTGGGTATCTCTGGCAGCATGGGCTGCCCGCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTGGCAGCTGGTGGGGTGTAGTTGCTaGACACCAACAGCAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPEETQMVVAPEAGRWQLVGCSC*TPTAKP Trigger: GGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCAC...CAGCTGCCACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTGGCAGCTGGGGCTGCACAATGGCTaGTGGGTAGATGTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPEETQMVVAPEAGRWQLGLHNG*WVDVVR Trigger: CCTCACTACATCTACCCACCAGCCATTGTGCAGCCC...CAGCTGCCACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | ACTAACAGGCATGCTGTGGAGTTCCCGCCCGCACACTGGCTCCCTGAGGTAGGTCTGGTCGTAAGTGGCTaGCGGGTACTGGGCGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNRHAVEFPPAHWLPEVGLVVSG*RVLGVG Trigger: GCCTACGCCCAGTACCCGCCAGCCACTTACGACCAG...ACCTACCTCAGGGAGCCAGTGTGCGGGCGGGAACTCCACAGCATGCCTGTTAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCGGGTACTGGGCGTAGGCTGGGCTGGCTGGTGTATACTCAAGGTAGGGCTTCTTTGGGGCAGCTaGAAAGTGTGGGGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWRVLGVGWAGWCILKVGLLWGS*KVWGKG Trigger: GCCCTTCCCCCACACTTTCCAGCTGCCCCAAAGAAG...CCCTACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCCAGTACCCGCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173720.2 |
||
| CDS-3UTR TCA 90 bp | GATCACCACGCTGGGCTGCACAATGGCTGGTGGGTAGATGTAGTGAGGAGTCAGCGTGGTGTCCTTCTGTaGGCCGTGCATGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHHAGLHNGWWVDVVRSQRGVLL*AVHGAG Trigger: CCCAGCGCCATGCACGGCTCACAGAAGGACACCACG...CTGACTCCTCACTACATCTACCCACCAGCCATTGTGCAGCCCAGCGTGGTGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173878.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGGCGAGTCAGCCCGTAGGTaGGCTGGATCAAGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLKHGRAAEETCCCLQGESARR*AGSRWG Trigger: ACCCCACCTTGATCCAGCGCACCTACGGGCTGACTC...GCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR GCA 90 bp | CGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGACTGCACGAAGGTGGTaGCTGCAGGTGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPRVKAPGTEWLQSFQSETARRW*LQVQQQ Trigger: CTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGT...CTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGCAGAGCTTCCAGAGTGAGTGTCCCTTCCTCCTCAGGCCCTTCCTCAAGCACTGCACGAAGGTGGTaGCTGCAGGTGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCRASRVSVPSSSGPSSSTARRW*LQVQQQ Trigger: CTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGT...GCTTGAGGAAGGGCCTGAGGAGGAAGGGACACTCACTCTGGAAGCTCTGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGAGGAGACCCAAATGGTGGTGGCTCCAGAGGCTGGCAGGTGGCAGCTGTTGCGCTGGATCAAGGTaGGGTGTAGTTGCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRRPKWWWLQRLAGGSCCAGSR*GVVAAH Trigger: GTGTGCAGCAACTACACCCCACCTTGATCCAGCGCA...ACAGCTGCCACCTGCCAGCCTCTGGAGCCACCACCATTTGGGTCTCCTCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGGCAGGGATCACCACGCTaGGCTGCACAATGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPQARQGCRRNLLLPSGQGSPR*AAQWLV Trigger: CACCAGCCATTGTGCAGCCCAGCGTGGTGATCCCTG...CCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | ACTAACAGGCATGCTGTGGAGTTCCCGCCCGCACACTGGCTCCCTGAGGTAGGTGGTACTGCACGAAGGTaGTGCCTGCAGGTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TNRHAVEFPPAHWLPEVGGTARR*CLQVQQ Trigger: CTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACC...ACCTACCTCAGGGAGCCAGTGTGCGGGCGGGAACTCCACAGCATGCCTGTTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTAGACGTGGGCTGGACCTTCTCTCTGTGCAGCTAGGTCAGACTGGCACACTGTCAGGCTGTAGCTaGGGTGCCTGGTACTGCACG | + |
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Preference number: 4 (lower is better) Translates to: PPRRGLDLLSVQLGQTGTLSGCS*GAWYCT Trigger: CGTGCAGTACCAGGCACCTCAGCTACAGCCTGACAG...TGTGCCAGTCTGACCTAGCTGCACAGAGAGAAGGTCCAGCCCACGTCTAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTGTGGTGGTGCCTGCAGGTaGAGCAGCAGACAAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRVKAPGTEWLQSFQSECGGACR*SSRQGL Trigger: CAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACC...ACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGTACTGGTCGTAAGTaGCTGGCGGGTACTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QALPQARQGCRRNLLLPSGTGRK*LAGTGR Trigger: ACGCCCAGTACCCGCCAGCCACTTACGACCAGTACC...TGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTGGTACTGGTCGTAAGTaGCTGGCGGGTACTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: CPFLLRPFLKHGRAAEETGTGRK*LAGTGR Trigger: ACGCCCAGTACCCGCCAGCCACTTACGACCAGTACC...AGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | ACACGTCCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGGTACTGCACGAAGGTaGTGCCTGCAGGTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TRPRVKAPGTEWLQSFQSGTARR*CLQVQQ Trigger: CTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACC...ACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGGACGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR TCA 90 bp | CCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCCCTCGAAGTACTTTCTaGGCGATGCGTCGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PFLLRPFLKHGRAAEETCPRSTF*AMRRWC Trigger: ACACCACCGACGCATCGCTCAGAAAGTACTTCGAGG...GCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | GTGTCCCTTCCTCCTCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACGGGCTGCACAATGGCTaGTGGGTAGATGTAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VSLPPQALPQARQGCRRNGLHNG*WVDVVR Trigger: CCTCACTACATCTACCCACCAGCCATTGTGCAGCCC...GTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGAGGAGGAAGGGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGATACCCACTCCTCCCCTCCTAGACGTGGGCTGGACCTTCTCTCTGTGCCGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PEIPTPPLLDVGWTFSLCRWAAQ*LVGRCS Trigger: ACTACATCTACCCACCAGCCATTGTGCAGCCCAGCG...GCACAGAGAGAAGGTCCAGCCCACGTCTAGGAGGGGAGGAGTGGGTATCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | TCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGGCAGGTGGGCGCTGGGCTGCACAATaGCTGGTGGGTAGATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SSTAGLQKKLAAAFRAGGRWAAQ*LVGRCS Trigger: ACTACATCTACCCACCAGCCATTGTGCAGCCCAGCG...CCCACCTGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | TCAGGCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCGGGCGTAGGCTGGGCTaGCTGGTGTATACTCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SGPSSSTAGLQKKLAAAFGRRLG*LVYTQG Trigger: ACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCC...GAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTGTCGTACTGGGCGTAGGCTaGGCTGGCTGGTGTATACTC | + |
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Preference number: 4 (lower is better) Translates to: PELRHLARSGCRASRVSVVLGVG*AGWCIL Trigger: GAGTATACACCAGCCAGCCCAGCCTACGCCCAGTAC...GACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGGCACCTCGAAGTACTTTCTaGGCGATGCGTCGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSSSTAGLQKKLAAAFRAPRSTF*AMRRWC Trigger: ACACCACCGACGCATCGCTCAGAAAGTACTTCGAGG...TGCCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | CTGGACCTTCTCTCTGTGCAGCTAGGTCAGACTGGCACAGGTGACAACGGGAGGTGCGCTGGATCAAGGTaGGGTGTAGTTGCTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: LDLLSVQLGQTGTGDNGRCAGSR*GVVAAH Trigger: GTGTGCAGCAACTACACCCCACCTTGATCCAGCGCA...CCTCCCGTTGTCACCTGTGCCAGTCTGACCTAGCTGCACAGAGAGAAGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | GATGGTCTTGCCTGCATGGCAGAAAATTCCCAGCAGGACATGGCACAGTGCTTCCTGGTCGTAAGTGGCTaGCGGGTACTGGGCGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: DGLACMAENSQQDMAQCFLVVSG*RVLGVG Trigger: GCCTACGCCCAGTACCCGCCAGCCACTTACGACCAG...GAAGCACTGTGCCATGTCCTGCTGGGAATTTTCTGCCATGCAGGCAAGACCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR GCA 90 bp | TTCCCAAAGAGGAGGGAGGACGTCTGTACACGTCCCAGAGTTAAGGCACCTGGCGTGGGGTGTAGTTGCTaGACACCAACAGCAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FPKRREDVCTRPRVKAPGVGCSC*TPTAKP Trigger: GGGCTTTGCTGTTGGTGTGCAGCAACTACACCCCAC...GCCAGGTGCCTTAACTCTGGGACGTGTACAGACGTCCTCCCTCCTCTTTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | ACTAACAGGCATGCTGTGGAGTTCCCGCCCGCACACTGGCTCCCTGAGGTAGGTCTGCACAATGGCTGGTaGGTAGATGTAGTGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TNRHAVEFPPAHWLPEVGLHNGW*VDVVRS Trigger: ACTCCTCACTACATCTACCCACCAGCCATTGTGCAG...ACCTACCTCAGGGAGCCAGTGTGCGGGCGGGAACTCCACAGCATGCCTGTTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CCA 90 bp | CCTCCTAGACGTGGGCTGGACCTTCTCTCTGTGCAGCTAGGTCAGACTGGCACACTGCACAATGGCTGGTaGGTAGATGTAGTGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PPRRGLDLLSVQLGQTGTLHNGW*VDVVRS Trigger: ACTCCTCACTACATCTACCCACCAGCCATTGTGCAG...TGTGCCAGTCTGACCTAGCTGCACAGAGAGAAGGTCCAGCCCACGTCTAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGTACTGCACGAAGGTGGTGCCTGCAGGTGCAGCAGCAGACAAGGCTTGGCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: AWYCTKVVPAGAAADKAWPPTKI*VNVVSF Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...CCAAGCCTTGTCTGCTGCTGCACCTGCAGGCACCACCTTCGTGCAGTACCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173878.8 |
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| CDS-3UTR CAA 90 bp | GCCCTTCCTCAAGCACGGCAGGGCTGCAGAAGAAACTTGCTGCTGCCTTCAGGGCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ALPQARQGCRRNLLLPSGPPTKI*VNVVSF Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...CCCTGAAGGCAGCAGCAAGTTTCTTCTGCAGCCCTGCCGTGCTTGAGGAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS-3UTR CAA 90 bp | GTACTGGGCGTAGGCTGGGCTGGCTGGTGTATACTCAAGGTAGGGCGAGGACAGCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLGVGWAGWCILKVGRGQPPTKI*VNVVSF Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...CTGTCCTCGCCCTACCTTGAGTATACACCAGCCAGCCCAGCCTACGCCCAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173720.2 ENSMUST00000173878.8 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTTAAGGCACCTGGCACGGAGTGGCTGCAGAGCTTCCAGAGTGAGTGTCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PRVKAPGTEWLQSFQSECPPTKI*VNVVSF Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...ACACTCACTCTGGAAGCTCTGCAGCCACTCCGTGCCAGGTGCCTTAACTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS GCA 72 bp | GATAGGGTTAGGGTCTTTGCAAGCCCTATCAGCCGCTaGCCGATCTGCCATGGTCACGAAGCCGTAGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: DRVRVFASPISR*PICHGHEAVAA Trigger: CGCGGCTACGGCTTCGTGACCATGGCAGATCGGGCAGCGGCTGATAGGGCTTGCAAAGACCCTAACCCTATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS CAA 72 bp | TTGGCCTTGCGACCATCGATGATAGGGTTAGGGTCTTaGCAAGCCCTATCAGCCGCTGCCCGATCTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: LALRPSMIGLGS*QALSAAARSAM Trigger: CATGGCAGATCGGGCAGCGGCTGATAGGGCTTGCAAAGACCCTAACCCTATCATCGATGGTCGCAAGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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| CDS CAA 90 bp | AGGTTCACATTGGCCTTGCGACCATCGATGATAGGGTTAGGGTCTTaGCAAGCCCTATCAGCCGCTGCCCGATCTGCCATGGTCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: RFTLALRPSMIGLGS*QALSAAARSAMVTK Trigger: CTTCGTGACCATGGCAGATCGGGCAGCGGCTGATAGGGCTTGCAAAGACCCTAACCCTATCATCGATGGTCGCAAGGCCAATGTGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029014.16 ENSMUST00000173393.8 |
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