Pregenerated sensors for RBM34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033931Ensembl transcript IDs: ENSMUST00000045994.8, ENSMUST00000212618.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGAGTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTAGAAGAACAGTCAGTGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: RRVHRTDGCEPPCGC*ELNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGTTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCACTCTTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 90 bp | CCAAAGTATCTAGGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTaGAAGGAGAAAACTCCAGAGTTTTCTTCTGGCCTCCACATTCAC | + |
|
Preference number: 1 (lower is better) Translates to: PKYLGPVRWLSESML*KEKTPEFSSGLHIH Trigger: GTGAATGTGGAGGCCAGAAGAAAACTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCCTAGATACTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 90 bp | GAAGAGGGCATCAGATCTCATTACGGATGGTTGCGAGCTACTATGTaGTTGCTGAGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: EEGIRSHYGWLRATM*LLRFELRTFGRAVS Trigger: ACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAGATCTGATGCCCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR TCA 90 bp | GCATCAGATCTCATTACGGATGGTTGCGAGCTACTATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTATTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ASDLITDGCELLCGC*DLNSGPLEEQSVFL Trigger: TAAGAATACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAGATCTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 90 bp | GTTTTACACAGCTCACAAGTCTTTCTTAGGGACTGTGACTATACCTaGAATCAGTATTCTCACAGTGACCATTTGAACACTTATCCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: VLHSSQVFLRDCDYT*NQYSHSDHLNTYPK Trigger: TTTAGGATAAGTGTTCAAATGGTCACTGTGAGAATACTGATTCCAGGTATAGTCACAGTCCCTAAGAAAGACTTGTGAGCTGTGTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCATGGACTCTGCCTGCCTaGATCAGCCTTGGCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VHRTDGCEPPCGCWELNSWTLPA*ISLGFL Trigger: CAGGAAGCCAAGGCTGATTCAGGCAGGCAGAGTCCA...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 90 bp | CTTGGCTTCCTGCTTCCCCCACTTCATCCTGGATCCAGCCCCAGCTaGGTAAGATGTGTCTGGAACTTAGGGAATGCAGCACCATGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LGFLLPPLHPGSSPS*VRCVWNLGNAAPCC Trigger: ACAACATGGTGCTGCATTCCCTAAGTTCCAGACACATCTTACCAAGCTGGGGCTGGATCCAGGATGAAGTGGGGGAAGCAGGAAGCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 90 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTAGAAGAACAGTCAGTGCTCTTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: VHRTDGCEPPCGCWE*NSGPLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGTTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTGGAAGGAGAAAACTCCAGAGCTACTATGTGGTTGCTaGGATTTGAACTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: GPVRWLSESMLWKEKTPELLCGC*DLNSGP Trigger: AGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAG...CTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 90 bp | GAGGGCATCAGATCTCATTACGGATGGTTGCGAGCTACTATGTGGTaGCTGAGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTATT | + |
|
Preference number: 2 (lower is better) Translates to: EGIRSHYGWLRATMW*LRFELRTFGRAVSI Trigger: AATACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAGATCTGATGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTATGTGTAAGTACACTGTAGTTGTATCCAGACATTCCAGAAGAGAGCATCAGTGCCTGAATCAGCCTTaGCTTCCTGCTTCCCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: FMCKYTVVVSRHSRREHQCLNQP*LPASPT Trigger: AGTGGGGGAAGCAGGAAGCCAAGGCTGATTCAGGCA...CTGATGCTCTCTTCTGGAATGTCTGGATACAACTACAGTGTACTTACACATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACATTAGGTTTTCTACATaGCATTTCCCAAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RVHRTDGCEPPCGCWELNIRFST*HFPKTE Trigger: TTCTGTCTTTGGGAAATGCCATGTAGAAAACCTAAT...GTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTGAGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTATTCTTAACTGCAAGAAAAATGAGAAGTaGAGAATGTGCGTGTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLRFELRTFGRAVSILNCKKNEK*RMCVCV Trigger: AACACACACGCACATTCTTCACTTCTCATTTTTCTT...GCAGTTAAGAATACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTACATCTATGCATGTATATAACCTGCTCACTCACAGGAGCTGTAAGTTGTACATGTTAGTGAAAAAGTaGACAAAGTCTGGGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: VTSMHVYNLLTHRSCKLYMLVKK*TKSGET Trigger: AGTCTCCCCAGACTTTGTGCACTTTTTCACTAACAT...GTACAACTTACAGCTCCTGTGAGTGAGCAGGTTATATACATGCATAGATGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 90 bp | ACATCTATGCATGTATATAACCTGCTCACTCACAGGAGCTGTAAGTaGTACATAGATTATATATGCACGCACAATCTAATGTTACATCTT | + |
|
Preference number: 2 (lower is better) Translates to: TSMHVYNLLTHRSCK*YIDYICTHNLMLHL Trigger: AAGATGTAACATTAGATTGTGCGTGCATATATAATCTATGTACAACTTACAGCTCCTGTGAGTGAGCAGGTTATATACATGCATAGATGT 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR GCA 72 bp | GTGAAAACTTATCCTACCCTCTTGCCTACTGGACTCTaGCTGCCTGAATCAGCCTTGGCTTCCTGCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VKTYPTLLPTGL*LPESALASCFP Trigger: GGGGAAGCAGGAAGCCAAGGCTGATTCAGGCAGGCAGAGTCCAGTAGGCAAGAGGGTAGGATAAGTTTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR GCA 72 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTCTAGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VHRTDGCEPPCG*WELNSGPLEEQ Trigger: CTGTTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR GCA 72 bp | TACACGGTAGCTGACTTCAGACACACAGCAGAAGAGTaGATCGGACAGATGGTTGTGAGCCACCATGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YTVADFRHTAEE*IGQMVVSHHVV Trigger: AACCACATGGTGGCTCACAACCATCTGTCCGATGCACTCTTCTGCTGTGTGTCTGAAGTCAGCTACCGTGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 72 bp | CTAGGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTaGAAGGAGAAAACTCCAGAGTTTTCTTCTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGPVRWLSESML*KEKTPEFSSGL Trigger: GAGGCCAGAAGAAAACTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTGGAAGGAGAAAACTCCAGAGAAACCCAGACACTCATaGCAAGGTTTCACCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPVRWLSESMLWKEKTPEKPRHS*QGFTTE Trigger: TTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTT...CTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 72 bp | CATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTAGAAGAACAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRTDGCEPPCGC*ELNSGPLEEQS Trigger: TGACTGTTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAAGGAGAAAACTCCAGAGTTTTCTTCTGGCCTCCACATTCACATCATACAGGATCCAGCCCCAGCTaGGTAAGATGTGTCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LEGENSRVFFWPPHSHHTGSSPS*VRCVWN Trigger: GTTCCAGACACATCTTACCAAGCTGGGGCTGGATCC...TGTATGATGTGAATGTGGAGGCCAGAAGAAAACTCTGGAGTTTTCTCCTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR TCA 72 bp | CGGATGGTTGCGAGCTACTATGTGGTTGCTGAGATTTaGACTCAGGACCTTTGGAAGAGCAGTCAGTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RMVASYYVVAEI*TQDLWKSSQYS Trigger: AGAATACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR TCA 72 bp | CTCATTACGGATGGTTGCGAGCTACTATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCELLCGC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 72 bp | CAGTACCGAATTCCAAAGTATCTAGGGCCAGTGAGATaGCTGAGTGAGTCCATGCTTTGGAAGGAGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QYRIPKYLGPVR*LSESMLWKEKT Trigger: AGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCCTAGATACTTTGGAATTCGGTACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTACATCTATGCATGTATATAACCTGCTCACTCACAGGAGCTGTAAGTTGTACACTTATCCTACCCTCTaGCCTACTGGACTCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VTSMHVYNLLTHRSCKLYTYPTL*PTGLCL Trigger: CAGGCAGAGTCCAGTAGGCAAGAGGGTAGGATAAGT...GTACAACTTACAGCTCCTGTGAGTGAGCAGGTTATATACATGCATAGATGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 72 bp | ATCAGATCTCATTACGGATGGTTGCGAGCTACTATGTaGTTGCTGAGATTTGAACTCAGGACCTTTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: IRSHYGWLRATM*LLRFELRTFGR Trigger: TCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAGATCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 72 bp | CAAACAACAGAAGAGGGCATCAGATCTCATTACGGATaGTTGCGAGCTACTATGTGGTTGCTGAGATTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QTTEEGIRSHYG*LRATMWLLRFE Trigger: TTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAGATCTGATGCCCTCTTCTGTTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CCA 72 bp | AGCTCACAAGTCTTTCTTAGGGACTGTGACTATACCTaGAATCAGTATTCTCACAGTGACCATTTGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: SSQVFLRDCDYT*NQYSHSDHLNT Trigger: AGTGTTCAAATGGTCACTGTGAGAATACTGATTCCAGGTATAGTCACAGTCCCTAAGAAAGACTTGTGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAAGGAGAAAACTCCAGAGTTTTCTTCTGGCCTCCACATTCACATCATACACACAGGAGCTGTAAGTaGTACATAGATTATATATGC | + |
|
Preference number: 3 (lower is better) Translates to: LEGENSRVFFWPPHSHHTHRSCK*YIDYIC Trigger: GCATATATAATCTATGTACAACTTACAGCTCCTGTG...TGTATGATGTGAATGTGGAGGCCAGAAGAAAACTCTGGAGTTTTCTCCTTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 72 bp | CTGCTTCCCCCACTTCATCCTGGATCCAGCCCCAGCTaGGTAAGATGTGTCTGGAACTTAGGGAATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPPLHPGSSPS*VRCVWNLGNAA Trigger: TGCTGCATTCCCTAAGTTCCAGACACATCTTACCAAGCTGGGGCTGGATCCAGGATGAAGTGGGGGAAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCATGGGCCCCATTTCTTTaGAGAGCTTTTGCAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VHRTDGCEPPCGCWELNSWAPFL*RAFAAA Trigger: CGCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCA...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGAGGGCAACGTCCAGTaGTTCTCCATCTGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHRTDGCEPPCGCWELNSEGNVQ*FSICHF Trigger: AAAGTGGCAGATGGAGAAGCACTGGACGTTGCCCTC...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTAGCCCTTCCTTCTCTTaGGTTCCTCCCCTCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVSPSFS*VPPLPE Trigger: CTCTGGGAGGGGAGGAACGCAAGAGAAGGAAGGGCT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTTGGGCCCCATTTCTTTaGAGAGCTTTTGCAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVWAPFL*RAFAAA Trigger: CGCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCA...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTAGAAGAACAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGPLEEQSVL Trigger: GAGCACTGACTGTTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTGAGGGCAACGTCCAGTaGTTCTCCATCTGCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVEGNVQ*FSICHF Trigger: AAAGTGGCAGATGGAGAAGCACTGGACGTTGCCCTC...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTGGAAGGAGAAAACTCCAGAGAATACGAAATCCTTCTaGAATCTGGGCCCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVRWLSESMLWKEKTPENTKSF*NLGPIS Trigger: AGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATT...CTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTTCTCACGATCCTCACTaGCACGATGCTTCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVSHDPH*HDASTV Trigger: GACTGTGGAAGCATCGTGGCAGTGAGGATCGTGAGA...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTGGAAGGAGAAAACTCCAGAGAGGCTCTTGCAAAACTaGCTTTTTAGTTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GPVRWLSESMLWKEKTPERLLQN*LFSLGH Trigger: GTGTCCCAAACTAAAAAGCCAGTTTTGCAAGAGCCT...CTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTTCTTTGCAGAGCTTTTaGAGCGGCGCTCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVSLQSF*SGALIL Trigger: AAGGATGAGAGCGCCGCTGCAAAAGCTCTGCAAAGA...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTTCCTCACTGCCACGATaGTTCCACAGTCCAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVSSLPR*FHSPES Trigger: ACTTTCTGGACTGTGGAAGCATCGTGGCAGTGAGGA...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR TCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTGCTCCTCTTCGGGGTTaGCTGGGATTTTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVAPLRG*LGFLFF Trigger: AAAGAACAAAAATCCCAGTCAACCCCGAAGAGGAGC...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR TCA 90 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAACACTACATATGCATTaGTGCTTTTCTGGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHRTDGCEPPCGCWELNSTLHMH*CFSGQD Trigger: ATCCTGACCAGAAAAGCATCAATGCATATGTAGTGT...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGAGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTATTCTTAACTGCTCTCACGATCCTCACTaGCACGATGCTTCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRFELRTFGRAVSILNCSHDPH*HDASTV Trigger: GACTGTGGAAGCATCGTGGCAGTGAGGATCGTGAGA...GCAGTTAAGAATACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 72 bp | AGATCTCATTACGGATGGTTGCGAGCTACTATGTGGTaGCTGAGATTTGAACTCAGGACCTTTGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSHYGWLRATMW*LRFELRTFGRA Trigger: TGCTCTTCCAAAGGTCCTGAGTTCAAATCTCAGCAACCACATAGTAGCTCGCAACCATCCGTAATGAGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | CAGTATTCTCACAGTGACCATTTGAACACTTATCCTAAACACAGAGTATTAATGAGCCCTTCCTTCTCTTaGGTTCCTCCCCTCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QYSHSDHLNTYPKHRVLMSPSFS*VPPLPE Trigger: CTCTGGGAGGGGAGGAACGCAAGAGAAGGAAGGGCT...CATTAATACTCTGTGTTTAGGATAAGTGTTCAAATGGTCACTGTGAGAATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTAATACGAAATCCTTCTaGAATCTGGGCCCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVNTKSF*NLGPIS Trigger: AGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTAGGCTCTTGCAAAACTaGCTTTTTAGTTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVRLLQN*LFSLGH Trigger: GTGTCCCAAACTAAAAAGCCAGTTTTGCAAGAGCCT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR TCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTACACTACATATGCATTaGTGCTTTTCTGGTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVTLHMH*CFSGQD Trigger: ATCCTGACCAGAAAAGCATCAATGCATATGTAGTGT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR TCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTAACTTCAAAGCAAGATaGACAGCATCTGTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVNFKAR*TASVFS Trigger: TGAGAACACAGATGCTGTTCATCTTGCTTTGAAGTT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCAGTCTTTCTTTGCAGAGCTTTTaGAGCGGCGCTCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGNELEDSHSYPISLSLQSF*SGALIL Trigger: AAGGATGAGAGCGCCGCTGCAAAAGCTCTGCAAAGA...AAGACTGATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCAGTCTTTCCTCACTGCCACGATaGTTCCACAGTCCAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGNELEDSHSYPISLSSLPR*FHSPES Trigger: ACTTTCTGGACTGTGGAAGCATCGTGGCAGTGAGGA...AAGACTGATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTTTTTTAGATGTTTCCTaGGGCACAGGCACAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVFLDVS*GTGTNT Trigger: TGTATTTGTGCCTGTGCCCCAGGAAACATCTAAAAA...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTTTTCTCGAAGGCTCTTaGAAAACTGGCTTTTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVFLEGS*KTGFLV Trigger: AACTAAAAAGCCAGTTTTGCAAGAGCCTTCGAGAAA...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGGAGAAAACTCCAGAGTTTTCTTCTGGCCTCCACATTCACATCATACATGCCAGTCTTTTGTCTaGATCAGAGAGTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEGENSRVFFWPPHSHHTCQSFV*IREFLH Trigger: GTGAAGAAACTCTCTGATGCAGACAAAAGACTGGCA...TGTATGATGTGAATGTGGAGGCCAGAAGAAAACTCTGGAGTTTTCTCCTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTCTTGAACACTACATATaGATTGATGCTTTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQTLIARFHHRKEATSVLEHYI*IDAFLV Trigger: GACCAGAAAAGCATCAATGCATATGTAGTGTTCAAG...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CCA 90 bp | TATACCTGGAATCAGTATTCTCACAGTGACCATTTGAACACTTATCCTAAACACGGGATTTTTGTTCTTTaGCCCCCATCCTTAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTWNQYSHSDHLNTYPKHGIFVL*PPSLAR Trigger: CCTTGCTAAGGATGGGGGCCAAAGAACAAAAATCCC...GTGTTTAGGATAAGTGTTCAAATGGTCACTGTGAGAATACTGATTCCAGGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCAGTCTTAACTTCAAAGCAAGATaGACAGCATCTGTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGNELEDSHSYPISLNFKAR*TASVFS Trigger: TGAGAACACAGATGCTGTTCATCTTGCTTTGAAGTT...AAGACTGATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | TTGACCACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCTTTCTCGAAGGCTCTTaGAAAACTGGCTTTTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTTVVTGNELEDSHSYPIFLEGS*KTGFLV Trigger: AACTAAAAAGCCAGTTTTGCAAGAGCCTTCGAGAAA...GATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGTGGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR GCA 90 bp | TTGACCACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCCTTGAACACTACATATaGATTGATGCTTTTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVVTGNELEDSHSYPILEHYI*IDAFLV Trigger: GACCAGAAAAGCATCAATGCATATGTAGTGTTCAAG...GATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGTGGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCAGTCTTTTTTTAGATGTTTCCTaGGGCACAGGCACAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGNELEDSHSYPISLFLDVS*GTGTNT Trigger: TGTATTTGTGCCTGTGCCCCAGGAAACATCTAAAAA...AAGACTGATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| 3UTR CAA 72 bp | CATGTATATAACCTGCTCACTCACAGGAGCTGTAAGTaGTACATAGATTATATATGCACGCACAATCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HVYNLLTHRSCK*YIDYICTHNLM Trigger: CATTAGATTGTGCGTGCATATATAATCTATGTACAACTTACAGCTCCTGTGAGTGAGCAGGTTATATACATG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS GCA 90 bp | CCCATCCTTAGCAAGGCTGAGGGCAACGTCCAGTGCTTCTCCATCTaGCACTTTACCCCGAGACTGAGACCTTCTCCTTCTTCCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PILSKAEGNVQCFSI*HFTPRLRPSPSSLP Trigger: GGGCAGGGAAGAAGGAGAAGGTCTCAGTCTCGGGGTAAAGTGGCAGATGGAGAAGCACTGGACGTTGCCCTCAGCCTTGCTAAGGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CCA 90 bp | GTTCTCAAAGAGCACATAGCCAAATCCTCTGCCGACTCCTGTAAGTaGGTTTCTCACGATCCTCACTGCCACGATGCTTCCACAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLKEHIAKSSADSCK*VSHDPHCHDASTVQ Trigger: CTGGACTGTGGAAGCATCGTGGCAGTGAGGATCGTGAGAAACCCACTTACAGGAGTCGGCAGAGGATTTGGCTATGTGCTCTTTGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS GCA 90 bp | AGAGGCCGTTTCAGATGCCAGATCAACTCGAATACGAAATCCTTCTaGAATCTGGGCCCCATTTCTTTGCAGAGCTTTTGCAGCGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRFRCQINSNTKSF*NLGPISLQSFCSGA Trigger: AGCGCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATTCGAGTTGATCTGGCATCTGAAACGGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS GCA 90 bp | AAATCCTCTGCCGACTCCTGTAAGTGGGTTTCTCACGATCCTCACTaGCACGATGCTTCCACAGTCCAGAAAGTGTTCCTCCAAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSSADSCKWVSHDPH*HDASTVQKVFLQSR Trigger: TCTGCTTTGGAGGAACACTTTCTGGACTGTGGAAGCATCGTGGCAGTGAGGATCGTGAGAAACCCACTTACAGGAGTCGGCAGAGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTCTGGGCCCCATTTCTTaGCAGAGCTTTTGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTQTLIARFHHRKEATSVLGPIS*QSFCSG Trigger: GCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCAG...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | GTGCATCGGACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGAGCACTTTCCCTGTTaGCCAGTCTTTTGTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VHRTDGCEPPCGCWELNSEHFPC*PVFCLH Trigger: ATGCAGACAAAAGACTGGCAAACAGGGAAAGTGCTC...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTCCGATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTCCTTCTTCCCTGCCCTaGGTCCTGATGAAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTQTLIARFHHRKEATSVPSSLP*VLMKLF Trigger: GAAGAGCTTCATCAGGACCAAGGGCAGGGAAGAAGG...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | GTTACATCTATGCATGTATATAACCTGCTCACTCACAGGAGCTGTAAGTTGTACCTGGGCCCCATTTCTTaGCAGAGCTTTTGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTSMHVYNLLTHRSCKLYLGPIS*QSFCSG Trigger: GCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCAG...GTACAACTTACAGCTCCTGTGAGTGAGCAGGTTATATACATGCATAGATGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS GCA 90 bp | TCAACTCGAATACGAAATCCTTCTGCAATCTGGGCCCCATTTCTTTaGAGAGCTTTTGCAGCGGCGCTCTCATCCTTGAACACTACATAT | + |
|
Preference number: 5 (lower is better) Translates to: STRIRNPSAIWAPFL*RAFAAALSSLNTTY Trigger: ATATGTAGTGTTCAAGGATGAGAGCGCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATTCGAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | TTGACCACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCCCTTCTTCCCTGCCCTaGGTCCTGATGAAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTTVVTGNELEDSHSYPIPSSLP*VLMKLF Trigger: GAAGAGCTTCATCAGGACCAAGGGCAGGGAAGAAGG...GATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGTGGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGTGAGATGGCTGAGTGAGTCCATGCTTTGGAAGGAGAAAACTCCAGAGCATCCTTCTTCAAGCTaGGATTTGAATTCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GPVRWLSESMLWKEKTPEHPSSS*DLNSVV Trigger: AACAACAGAATTCAAATCCAAGCTTGAAGAAGGATG...CTCTGGAGTTTTCTCCTTCCAAAGCATGGACTCACTCAGCCATCTCACTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTCTGTTTGCCAGTCTTTaGTCTGCATCAGAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTQTLIARFHHRKEATSVLFASL*SASESF Trigger: GAAACTCTCTGATGCAGACAAAAGACTGGCAAACAG...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS TCA 90 bp | CAAAGCAGAGTCTTCAATTTTGTAAGGAAGATTCCCCACAAATACTaGTCTCTTGTCCCTAGAGGCCGTTTCAGATGCCAGATCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSRVFNFVRKIPHKY*SLVPRGRFRCQINS Trigger: CGAGTTGATCTGGCATCTGAAACGGCCTCTAGGGACAAGAGATCAGTATTTGTGGGGAATCTTCCTTACAAAATTGAAGACTCTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTAACTGGCTTTTTAGTTaGGGACACACTCTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTQTLIARFHHRKEATSVNWLFS*GHTLFF Trigger: GAAGAAGAGAGTGTGTCCCAAACTAAAAAGCCAGTT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTAACACTACATATGCATaGATGCTTTTCTGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KTQTLIARFHHRKEATSVNTTYA*MLFWSG Trigger: TCCTGACCAGAAAAGCATCAATGCATATGTAGTGTT...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAGACACTCATTGCAAGGTTTCACCACAGAAAGGAGGCAACCTCAGTTCATCCTTCTTCAAGCTaGGATTTGAATTCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KTQTLIARFHHRKEATSVHPSSS*DLNSVV Trigger: AACAACAGAATTCAAATCCAAGCTTGAAGAAGGATG...AACTGAGGTTGCCTCCTTTCTGTGGTGAAACCTTGCAATGAGTGTCTGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGTCACTGGCAACGAATTAGAAGATAGTCACTCTTATCCTATCAGTCTTAACTGGCTTTTTAGTTaGGGACACACTCTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVVTGNELEDSHSYPISLNWLFS*GHTLFF Trigger: GAAGAAGAGAGTGTGTCCCAAACTAAAAAGCCAGTT...AAGACTGATAGGATAAGAGTGACTATCTTCTAATTCGTTGCCAGTGACTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CAA 90 bp | TATACCTGGAATCAGTATTCTCACAGTGACCATTTGAACACTTATCCTAAACACCTGTTTGCCAGTCTTTaGTCTGCATCAGAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YTWNQYSHSDHLNTYPKHLFASL*SASESF Trigger: GAAACTCTCTGATGCAGACAAAAGACTGGCAAACAG...GTGTTTAGGATAAGTGTTCAAATGGTCACTGTGAGAATACTGATTCCAGGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS-3UTR CAA 90 bp | GTTACATCTATGCATGTATATAACCTGCTCACTCACAGGAGCTGTAAGTTGTACAACACTACATATGCATaGATGCTTTTCTGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTSMHVYNLLTHRSCKLYNTTYA*MLFWSG Trigger: TCCTGACCAGAAAAGCATCAATGCATATGTAGTGTT...GTACAACTTACAGCTCCTGTGAGTGAGCAGGTTATATACATGCATAGATGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045994.8 |
||
| CDS TCA 72 bp | GCACAAATACAGGAGGAGCCGATGGCTCCGCGGTGCTaGAGAGAGCGGCCAGCCGCCCCGTCCCGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AQIQEEPMAPRC*RERPAAPSRLQ Trigger: CTGGAGGCGGGACGGGGCGGCTGGCCGCTCTCTTCAGCACCGCGGAGCCATCGGCTCCTCCTGTATTTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS GCA 72 bp | GCCCCCATCCTTAGCAAGGCTGAGGGCAACGTCCAGTaGTTCTCCATCTGCCACTTTACCCCGAGACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: APILSKAEGNVQ*FSICHFTPRLR Trigger: TCTCAGTCTCGGGGTAAAGTGGCAGATGGAGAAGCACTGGACGTTGCCCTCAGCCTTGCTAAGGATGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS GCA 72 bp | AGCAAGGCTGAGGGCAACGTCCAGTGCTTCTCCATCTaGCACTTTACCCCGAGACTGAGACCTTCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SKAEGNVQCFSI*HFTPRLRPSPS Trigger: AGAAGGAGAAGGTCTCAGTCTCGGGGTAAAGTGGCAGATGGAGAAGCACTGGACGTTGCCCTCAGCCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS GCA 72 bp | GCCGACTCCTGTAAGTGGGTTTCTCACGATCCTCACTaGCACGATGCTTCCACAGTCCAGAAAGTGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ADSCKWVSHDPH*HDASTVQKVFL Trigger: GAGGAACACTTTCTGGACTGTGGAAGCATCGTGGCAGTGAGGATCGTGAGAAACCCACTTACAGGAGTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CCA 72 bp | GAGCACATAGCCAAATCCTCTGCCGACTCCTGTAAGTaGGTTTCTCACGATCCTCACTGCCACGATGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EHIAKSSADSCK*VSHDPHCHDAS Trigger: GGAAGCATCGTGGCAGTGAGGATCGTGAGAAACCCACTTACAGGAGTCGGCAGAGGATTTGGCTATGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CAA 90 bp | TTCCCTGCCCTTGGTCCTGATGAAGCTCTTCTTCTAGATCAGCACTaGCTAGAGCACTTTCCCTGTTTGCCAGTCTTTTGTCTGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPALGPDEALLLDQH*LEHFPCLPVFCLHQ Trigger: CTGATGCAGACAAAAGACTGGCAAACAGGGAAAGTGCTCTAGCAAGTGCTGATCTAGAAGAAGAGCTTCATCAGGACCAAGGGCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CAA 72 bp | AATACGAAATCCTTCTGCAATCTGGGCCCCATTTCTTaGCAGAGCTTTTGCAGCGGCGCTCTCATCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NTKSFCNLGPIS*QSFCSGALILE Trigger: TTCAAGGATGAGAGCGCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CAA 90 bp | ATCAACTCGAATACGAAATCCTTCTGCAATCTGGGCCCCATTTCTTaGCAGAGCTTTTGCAGCGGCGCTCTCATCCTTGAACACTACATA | + |
|
Preference number: 6 (lower is better) Translates to: INSNTKSFCNLGPIS*QSFCSGALILEHYI Trigger: TATGTAGTGTTCAAGGATGAGAGCGCCGCTGCAAAAGCTCTGCAAAGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATTCGAGTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS GCA 72 bp | TTCAGATGCCAGATCAACTCGAATACGAAATCCTTCTaGAATCTGGGCCCCATTTCTTTGCAGAGCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FRCQINSNTKSF*NLGPISLQSFC Trigger: GCAAAAGCTCTGCAAAGAAATGGGGCCCAGATTGCAGAAGGATTTCGTATTCGAGTTGATCTGGCATCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CAA 72 bp | CTTCTAGATCAGCACTTGCTAGAGCACTTTCCCTGTTaGCCAGTCTTTTGTCTGCATCAGAGAGTTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLDQHLLEHFPC*PVFCLHQRVSS Trigger: TGAAGAAACTCTCTGATGCAGACAAAAGACTGGCAAACAGGGAAAGTGCTCTAGCAAGTGCTGATCTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CAA 72 bp | TTTCTTTGCAGAGCTTTTGCAGCGGCGCTCTCATCCTaGAACACTACATATGCATTGATGCTTTTCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLCRAFAAALSS*NTTYALMLFWS Trigger: TGACCAGAAAAGCATCAATGCATATGTAGTGTTCAAGGATGAGAGCGCCGCTGCAAAAGCTCTGCAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||
| CDS CAA 72 bp | GCACTTGCTAGAGCACTTTCCCTGTTTGCCAGTCTTTaGTCTGCATCAGAGAGTTTCTTCACTTTCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALARALSLFASL*SASESFFTFTF Trigger: AAAAGTGAAAGTGAAGAAACTCTCTGATGCAGACAAAAGACTGGCAAACAGGGAAAGTGCTCTAGCAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045994.8 ENSMUST00000212618.2 |
||