RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM33 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048271

Ensembl transcript IDs: ENSMUST00000030920.6, ENSMUST00000059644.13, ENSMUST00000090355.11, ENSMUST00000114884.8, ENSMUST00000133313.2, ENSMUST00000144967.8

Found 605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGCTGTGCCTCACCCTATGCCAGGAAAACTAGGCCAAGAGGGCTaGCTGCAGGGTGGCAGAGCCACTGGCTCTGGAGTGCCCAGTGCT +
Preference number: 1 (lower is better)
Translates to: QAVPHPMPGKLGQEG*LQGGRATGSGVPSA
Trigger: AGCACTGGGCACTCCAGAGCCAGTGGCTCTGCCACCCTGCAGGCAGCCCTCTTGGCCTAGTTTTCCTGGCATAGGGTGAGGCACAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTaGAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGACCT +
Preference number: 1 (lower is better)
Translates to: WNHPVAGWHADKLAN*RLERPALLGILHRP
Trigger: AGGTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 90 bp AACCCACCTCCCAGGCCATCAGCCACACTCCTCCACAGCAAGCCATaGGCACAGGACCTGCACAAGCAGCTACCTATTTGGATTGGGTGG +
Preference number: 1 (lower is better)
Translates to: NPPPRPSATLLHSKP*AQDLHKQLPIWIGW
Trigger: CCACCCAATCCAAATAGGTAGCTGCTTGTGCAGGTCCTGTGCCCATGGCTTGCTGTGGAGGAGTGTGGCTGATGGCCTGGGAGGTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 90 bp TGCCTGCAGGGTGGCAGAGCCACTGGCTCTGGAGTGCCCAGTGCTTaGCTAGCTAGCAATCTGAGCGTTTCTGTTGAAACAGGTGGCACT +
Preference number: 1 (lower is better)
Translates to: CLQGGRATGSGVPSA*LASNLSVSVETGGT
Trigger: AGTGCCACCTGTTTCAACAGAAACGCTCAGATTGCTAGCTAGGCAAGCACTGGGCACTCCAGAGCCAGTGGCTCTGCCACCCTGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 90 bp CTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTaGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGC +
Preference number: 1 (lower is better)
Translates to: LSSGITLWLAGTQTS*QTADWRDLHFWGSC
Trigger: GCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR CCA 90 bp AGGCAGCGCTGCTGCACCTGGAAACGAAACATCTGGATTGAAGCCTaGGAGGGAAGTCCTCACAGAGGACACAGCTCAGGATCGGGATCC +
Preference number: 1 (lower is better)
Translates to: RQRCCTWKRNIWIEA*EGSPHRGHSSGSGS
Trigger: GGATCCCGATCCTGAGCTGTGTCCTCTGTGAGGACTTCCCTCCCAGGCTTCAATCCAGATGTTTCGTTTCCAGGTGCAGCAGCGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 90 bp CTCTCCTTACCCACCGGAGCGACCACTGTCCAGTCCTCCCTCCCATaGCTTTTAAGTTCCCTACCAGCTTCCATGAGCAGCAAAGCCTTC +
Preference number: 1 (lower is better)
Translates to: LSLPTGATTVQSSLP*LLSSLPASMSSKAF
Trigger: GAAGGCTTTGCTGCTCATGGAAGCTGGTAGGGAACTTAAAAGGCATGGGAGGGAGGACTGGACAGTGGTCGCTCCGGTGGGTAAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 90 bp TGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTaGGCTCCTCGGTCAACAGCGGTGTCGAAGAGGATGTCTCCTTAC +
Preference number: 1 (lower is better)
Translates to: WAHVFLGISSHSKWP*APRSTAVSKRMSPY
Trigger: GTAAGGAGACATCCTCTTCGACACCGCTGTTGACCGAGGAGCTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 90 bp TGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTaGACTTCTGGGGATCCTGCACCGACCTACAGCTTCCTTGAAGAA +
Preference number: 1 (lower is better)
Translates to: WLARRQVGKLQTGET*TSGDPAPTYSFLEE
Trigger: TTCTTCAAGGAAGCTGTAGGTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 90 bp CCTCCTGCCAGAGGGAGCCTGACTCAAGTGAGTATCAGTGGCCACTaGAGACGTGGAAGCCACAGAAATGGAGGGAAAGAACATGCACTG +
Preference number: 1 (lower is better)
Translates to: PPARGSLTQVSISGH*RRGSHRNGGKEHAL
Trigger: CAGTGCATGTTCTTTCCCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGTCAGGCTCCCTCTGGCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 90 bp AGTGCTCCCTCCTGCCAGAGGGAGCCTGACTCAAGTGAGTATCAGTaGCCACTGCAGACGTGGAAGCCACAGAAATGGAGGGAAAGAACA +
Preference number: 1 (lower is better)
Translates to: SAPSCQREPDSSEYQ*PLQTWKPQKWRERT
Trigger: TGTTCTTTCCCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGTCAGGCTCCCTCTGGCAGGAGGGAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 90 bp GGCAGTGTCACTCATACAGGAAGAGCATGTGACTGGCAGAAACAGTaGGGCCAGAGGAAAGTGAGGTGGTGTCTCGTGGTTTCTAAGCAG +
Preference number: 1 (lower is better)
Translates to: GSVTHTGRACDWQKQ*GQRKVRWCLVVSKQ
Trigger: CTGCTTAGAAACCACGAGACACCACCTCACTTTCCTCTGGCCTCACTGTTTCTGCCAGTCACATGCTCTTCCTGTATGAGTGACACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 90 bp AACTGGAGGAAAGCACGGCAGTGTCACTCATACAGGAAGAGCATGTaGCTGGCAGAAACAGTGAGGCCAGAGGAAAGTGAGGTGGTGTCT +
Preference number: 1 (lower is better)
Translates to: NWRKARQCHSYRKSM*LAETVRPEESEVVS
Trigger: AGACACCACCTCACTTTCCTCTGGCCTCACTGTTTCTGCCAGTCACATGCTCTTCCTGTATGAGTGACACTGCCGTGCTTTCCTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 90 bp ATGCTCTTAAAGTCACAGGAAAGCACAAGGCAGCGCTGCTGCACCTaGAAACGAAACATCTGGATTGAAGCCTGGGAGGGAAGTCCTCAC +
Preference number: 1 (lower is better)
Translates to: MLLKSQESTRQRCCT*KRNIWIEAWEGSPH
Trigger: GTGAGGACTTCCCTCCCAGGCTTCAATCCAGATGTTTCGTTTCCAGGTGCAGCAGCGCTGCCTTGTGCTTTCCTGTGACTTTAAGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 90 bp TTAGTGTACCAAGCAGGCGTGAGGCAGAGGCTGTGTGGTCAGAGGTaGCACCATACCACAATGTCTTCTAAGACATCCTATGAATGCCTC +
Preference number: 1 (lower is better)
Translates to: LVYQAGVRQRLCGQR*HHTTMSSKTSYECL
Trigger: GAGGCATTCATAGGATGTCTTAGAAGACATTGTGGTATGGTGCCACCTCTGACCACACAGCCTCTGCCTCACGCCTGCTTGGTACACTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 90 bp CAGACGTGGAAGCCACAGAAATGGAGGGAAAGAACATGCACTGGGTaGGGGAACAGTCACAACACCTTAGGTGTTGTCAACCAGATGGAA +
Preference number: 1 (lower is better)
Translates to: QTWKPQKWRERTCTG*GNSHNTLGVVNQME
Trigger: TTCCATCTGGTTGACAACACCTAAGGTGTTGTGACTGTTCCCCCACCCAGTGCATGTTCTTTCCCTCCATTTCTGTGGCTTCCACGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 90 bp ACTGCAGACGTGGAAGCCACAGAAATGGAGGGAAAGAACATGCACTaGGTGGGGGAACAGTCACAACACCTTAGGTGTTGTCAACCAGAT +
Preference number: 1 (lower is better)
Translates to: TADVEATEMEGKNMH*VGEQSQHLRCCQPD
Trigger: ATCTGGTTGACAACACCTAAGGTGTTGTGACTGTTCCCCCACCCAGTGCATGTTCTTTCCCTCCATTTCTGTGGCTTCCACGTCTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 90 bp CTAGGGCACCATCTTCCTCACCAAGCTTTCTATTTGTCCATCATCTaGGAATGTACAAGCCCTGTCGGGAAGCTTCCTCTCTCAGGAAAC +
Preference number: 1 (lower is better)
Translates to: LGHHLPHQAFYLSII*ECTSPVGKLPLSGN
Trigger: GTTTCCTGAGAGAGGAAGCTTCCCGACAGGGCTTGTACATTCCCAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATGGTGCCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 90 bp TGCTTTGAGTCCAGAGCTCCCTCCTTATTACCCAGCGACAGTAGATaGCAACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGA +
Preference number: 1 (lower is better)
Translates to: CFESRAPSLLPSDSR*QQTSVSSILPRYVR
Trigger: TCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTAATAAGGAGGGAGCTCTGGACTCAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 90 bp AATGGCAATGCTTTCCTTGGAGTCAGGAGTCCACTTATAGACAACTaGTCAGTGTGGGCAAAGACTAGCAGCTTCTTCCTCCTCCCAGAT +
Preference number: 1 (lower is better)
Translates to: NGNAFLGVRSPLIDN*SVWAKTSSFFLLPD
Trigger: ATCTGGGAGGAGGAAGAAGCTGCTAGTCTTTGCCCACACTGACCAGTTGTCTATAAGTGGACTCCTGACTCCAAGGAAAGCATTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 90 bp AGAAAGGCAGCCCAAAGGAAACTCAGAGCCCTGAATGAAGGACAGTaGGACAATCAAACCAATGACAGCACGAACTACAGAGCTAGGACA +
Preference number: 1 (lower is better)
Translates to: RKAAQRKLRALNEGQ*DNQTNDSTNYRART
Trigger: TGTCCTAGCTCTGTAGTTCGTGCTGTCATTGGTTTGATTGTCTCACTGTCCTTCATTCAGGGCTCTGAGTTTCCTTTGGGCTGCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 90 bp TACACAAAGAACAGAGATAATGGTTGCAGCAGATCTTCCACCGTCTaGCTTCCCTGTGAGAAGGACACTGCAAGTGGGGAATGCTCTTTC +
Preference number: 1 (lower is better)
Translates to: YTKNRDNGCSRSSTV*LPCEKDTASGECSF
Trigger: GAAAGAGCATTCCCCACTTGCAGTGTCCTTCTCACAGGGAAGTCAGACGGTGGAAGATCTGCTGCAACCATTATCTCTGTTCTTTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 90 bp CTGTCATTGCAGAATTTGGTGAAGTGTCTAAGGTTCTCCCATAATTaGGTTAAGCTCCTAGTGGCTTCCTCTGTGGGGAGGGGTCTTGTT +
Preference number: 1 (lower is better)
Translates to: LSLQNLVKCLRFSHN*VKLLVASSVGRGLV
Trigger: AACAAGACCCCTCCCCACAGAGGAAGCCACTAGGAGCTTAACTCAATTATGGGAGAACCTTAGACACTTCACCAAATTCTGCAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 90 bp AAATGGATGTGTAGCAAGGTCAGAGTGAGCCGTTGTTCTAAGCAGTaGTTGGAGCTGGTCTGTCTCACAGGACACTACAATAAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: KWMCSKVRVSRCSKQ*LELVCLTGHYNKEK
Trigger: TTTTTCCTTATTGTAGTGTCCTGTGAGACAGACCAGCTCCAAGCACTGCTTAGAACAACGGCTCACTCTGACCTTGCTACACATCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 90 bp GATGAAGGCAGCTTAGTGTCCACCTGGAGAATTTGTATGTGTCCCTaGAAGATACATGCTGCTTGCTCCTCTTTAGTAGTAAAAGCAAGC +
Preference number: 1 (lower is better)
Translates to: DEGSLVSTWRICMCP*KIHAACSSLVVKAS
Trigger: GCTTGCTTTTACTACTAAAGAGGAGCAAGCAGCATGTATCTTTCAGGGACACATACAAATTCTCCAGGTGGACACTAAGCTGCCTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 90 bp CAGTTCCTAGGAAGGTCAAGTAAGGCATCTAACAAATGTCCCTTCTaGCACCTGATACCAGCAGGAGGTATACTTGGGATCCAATATGAA +
Preference number: 1 (lower is better)
Translates to: QFLGRSSKASNKCPF*HLIPAGGILGIQYE
Trigger: TTCATATTGGATCCCAAGTATACCTCCTGCTGGTATCAGGTGTCAGAAGGGACATTTGTTAGATGCCTTACTTGACCTTCCTAGGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 90 bp GGTCAACAGCGGTGTCGAAGAGGATGTCTCCTTACCTTACTTCAATaGTTCAGTGCCTACTTTCAGACAAAAATGCATAGTTGGGTTTTA +
Preference number: 1 (lower is better)
Translates to: GQQRCRRGCLLTLLQ*FSAYFQTKMHSWVL
Trigger: TAAAACCCAACTATGCATTTTTGTCTGAAAGTAGGCACTGAAGCATTGAAGTAAGGTAAGGAGACATCCTCTTCGACACCGCTGTTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 90 bp ATACCAGCAGGAGGTATACTTGGGATCCAATATGAATCAGTGGATTaGTCTGGTTCTAGTACACAAAGCCATGGGTTTGTGTACCTAAGA +
Preference number: 1 (lower is better)
Translates to: IPAGGILGIQYESVD*SGSSTQSHGFVYLR
Trigger: TCTTAGGTACACAAACCCATGGCTTTGTGTACTAGAACCAGAGCAATCCACTGATTCATATTGGATCCCAAGTATACCTCCTGCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 90 bp ATTGGCATGAATCATTACACTCATATGTACCAGGCTCAAGAGGAATaGCAATGCTTTCCTTGGAGTCAGGAGTCCACTTATAGACAACTG +
Preference number: 1 (lower is better)
Translates to: IGMNHYTHMYQAQEE*QCFPWSQESTYRQL
Trigger: CAGTTGTCTATAAGTGGACTCCTGACTCCAAGGAAAGCATTGCCATTCCTCTTGAGCCTGGTACATATGAGTGTAATGATTCATGCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 90 bp TTGGTCTCCTTTCTTCTAAAGTCCAAGCAGAACCTGGTAACACACTaGAAATACAATCTTCCTGGGCAATGCATGGGACTAAAGTCTCAA +
Preference number: 1 (lower is better)
Translates to: LVSFLLKSKQNLVTH*KYNLPGQCMGLKSQ
Trigger: TTGAGACTTTAGTCCCATGCATTGCCCAGGAAGATTGTATTTTCAGTGTGTTACCAGGTTCTGCTTGGACTTTAGAAGAAAGGAGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 90 bp GTAGGCTCATGTGTGTGCCAGTTGTTAAAATGTTGGCAACTTAATTaGAAACGTAATGTAAAACTTCAGCTGTGGGCACACGTGTTCCTG +
Preference number: 1 (lower is better)
Translates to: VGSCVCQLLKCWQLN*KRNVKLQLWAHVFL
Trigger: CAGGAACACGTGTGCCCACAGCTGAAGTTTTACATTACGTTTTCAATTAAGTTGCCAACATTTTAACAACTGGCACACACATGAGCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 90 bp GCCTGGAATACCATTCTCCAGTTGTTAAAACGTTGGCAACTTAATTaGAAACGTAATGTAAAACCTTCAGCTGTGGAAGCCAGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: AWNTILQLLKRWQLN*KRNVKPSAVEASCF
Trigger: AAAGCAGCTGGCTTCCACAGCTGAAGGTTTTACATTACGTTTTCAATTAAGTTGCCAACGTTTTAACAACTGGAGAATGGTATTCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 90 bp CAATTTAACGAAATATCTATCAACATTTCCTGTGTCCAAATGAAATaGGTGGGAGTGACAGTGGGAGACCAGTTGACAGCACTTAGATGG +
Preference number: 1 (lower is better)
Translates to: QFNEISINISCVQMK*VGVTVGDQLTALRW
Trigger: CCATCTAAGTGCTGTCAACTGGTCTCCCACTGTCACTCCCACTCATTTCATTTGGACACAGGAAATGTTGATAGATATTTCGTTAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 90 bp TTCTATCCTGATTCAGATAACCATCTTGGACCGTTGCATATCACATaGGAACTAGCAAATGGAAATGATTATGGAAAACCCACCTCCCAG +
Preference number: 1 (lower is better)
Translates to: FYPDSDNHLGPLHIT*ELANGNDYGKPTSQ
Trigger: CTGGGAGGTGGGTTTTCCATAATCATTTCCATTTGCTAGTTCTCATGTGATATGCAACGGTCCAAGATGGTTATCTGAATCAGGATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 90 bp TGTGTCCTAACCCTCAGCCTCCTATATGGCGTCTATCTTGTCCAATaGGAGCTAACATATTACCAAACTCACCAATTTAACGAAATATCT +
Preference number: 1 (lower is better)
Translates to: CVLTLSLLYGVYLVQ*ELTYYQTHQFNEIS
Trigger: AGATATTTCGTTAAATTGGTGAGTTTGGTAATATGTTAGCTCTCATTGGACAAGATAGACGCCATATAGGAGGCTGAGGGTTAGGACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 90 bp GCCAAGGTACATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTaGAACTATTTGGGAAGGATTAGTAGGTGTGGCCTTGTTGGAAAA +
Preference number: 1 (lower is better)
Translates to: AKVHRFIYLNVCPSL*NYLGRISRCGLVGK
Trigger: TTTTCCAACAAGGCCACACCTACTAATCCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATGTACCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CCA 90 bp ACTGTTAAATTCATTTTACTGTGTCCTAACCCTCAGCCTCCTATATaGCGTCTATCTTGTCCAATGAGAGCTAACATATTACCAAACTCA +
Preference number: 1 (lower is better)
Translates to: TVKFILLCPNPQPPI*RLSCPMRANILPNS
Trigger: TGAGTTTGGTAATATGTTAGCTCTCATTGGACAAGATAGACGCCATATAGGAGGCTGAGGGTTAGGACACAGTAAAATGAATTTAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp CCCCAGGGTGGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTTGTGCATTTGTACCAAGCAGGCGTaGGGCAGAGGCTGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: PQGGPQLGHKEVLPDLCICTKQA*GRGCVV
Trigger: GACCACACAGCCTCTGCCTCACGCCTGCTTGGTACA...AATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCCACCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CCA 90 bp CCAGCAACACAGCCTGCACTCCAAGCTGCCTGCACAGCAGGGAGGTGCACAAACGAATCGCCACTTCCATaGCACCACTCCCAGACACCC +
Preference number: 2 (lower is better)
Translates to: PATQPALQAACTAGRCTNESPLP*HHSQTP
Trigger: GGGTGTCTGGGAGTGGTGCCATGGAAGTGGCGATTC...GTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp CCAGCAACACAGCCTGCACTCCAAGCTGCCTGCACAGCAGGGAGGTGCACAAACAGCACAAGGCAGCGCTaGTGCACCTGGAAACGAAAC +
Preference number: 2 (lower is better)
Translates to: PATQPALQAACTAGRCTNSTRQR*CTWKRN
Trigger: GTTTCGTTTCCAGGTGCAGCAGCGCTGCCTTGTGCT...GTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 90 bp GCTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTaGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTG +
Preference number: 2 (lower is better)
Translates to: ALFWNHPVAGWHADK*ANCRLERPALLGIL
Trigger: CAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR-3UTR TCA 90 bp GTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACCAAGCAGGCGTGAGGCAGAGGTTTACCAGAGCCTGTTaGTGGCTTTCTGAGACCACT +
Preference number: 2 (lower is better)
Translates to: VQPLQGWPLVYQAGVRQRFTRAC*WLSETT
Trigger: AGTGGTCTCAGAAAGCCATCAACAGGCTCTGGTAAA...CCTCTGCCTCACGCCTGCTTGGTACACTAAGGGCCAGCCCTGCAGGGGCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CCA 90 bp AGCTGTGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTGAGCACCCTGTGGCTGGCTaGCACGCAGACAAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: SCGHTCSWVSHHTQSGPEHPVAG*HADKLA
Trigger: TGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTG...CTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp TGGTGTCTCGTGGTTTCTAAGCAGCCAGCGCACTCCCAGCAACACAGCCTGCACGGCTCTACACCTAAGTaGAGGACCACCCTTTGGAGT +
Preference number: 2 (lower is better)
Translates to: WCLVVSKQPAHSQQHSLHGSTPK*RTTLWS
Trigger: ACTCCAAAGGGTGGTCCTTCACTTAGGTGTAGAGCC...GTGCAGGCTGTGTTGCTGGGAGTGCGCTGGCTGCTTAGAAACCACGAGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 90 bp GGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTTGTGCATTTaGTCTTGGGTCAGAGGACACAGAGAAGACCCTCAGAGCACCCTA +
Preference number: 2 (lower is better)
Translates to: GPQLGHKEVLPDLCI*SWVRGHREDPQSTL
Trigger: TAGGGTGCTCTGAGGGTCTTCTCTGTGTCCTCTGACCCAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 90 bp AAAGCACAAGGCAGCGCTGCTGCACCTGGAAACGAAACATCTGGATaGAAGCCTGGGAGGGAAGTCCTCACAGAGGACACAGCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: KAQGSAAAPGNETSG*KPGREVLTEDTAQD
Trigger: ATCCTGAGCTGTGTCCTCTGTGAGGACTTCCCTCCCAGGCTTCAATCCAGATGTTTCGTTTCCAGGTGCAGCAGCGCTGCCTTGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CCA 90 bp CTTCTAAGACATCCTATGAATGCCTCAGCTCAACTGCCTGGATACCAAACAACAGGGCTGCCTGCAGGGTaGCAGAGCCACTGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LLRHPMNASAQLPGYQTTGLPAG*QSHWLW
Trigger: CCAGAGCCAGTGGCTCTGCCACCCTGCAGGCAGCCC...TGTTGTTTGGTATCCAGGCAGTTGAGCTGAGGCATTCATAGGATGTCTTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CCA 90 bp AGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACTCAGCTCAACTGCCTaGATACCAAACAACAACTGT +
Preference number: 2 (lower is better)
Translates to: RWAKAKLGTAPAGLALSVLSSTA*IPNNNC
Trigger: ACAGTTGTTGTTTGGTATCCAGGCAGTTGAGCTGAG...TACACTAAGGGCCAGCCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR GCA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGACTGTGTTCAATGTCTaGCCAGCATGGACTTCTAAG +
Preference number: 2 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGTVFNV*PAWTSK
Trigger: CTTAGAAGTCCATGCTGGGCAGACATTGAACACAGT...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CCA 90 bp ACTCAAGTGAGTATCAGTGGCCACTGCAGACGTGGAAGCCACAGAAATGGAGGGAGCAGTGCTTGGAGCTaGTCTGTCTCACAGGACACT +
Preference number: 2 (lower is better)
Translates to: TQVSISGHCRRGSHRNGGSSAWS*SVSQDT
Trigger: AGTGTCCTGTGAGACAGACCAGCTCCAAGCACTGCT...CCCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp GACCACTGTCCAGTCCTCCCTCCCATGCCTTTTAAGTTCCCTACCAGCTTCCATGACAAGTTGGCAAACTaGAGACTGGAGAGACCTGCA +
Preference number: 2 (lower is better)
Translates to: DHCPVLPPMPFKFPTSFHDKLAN*RLERPA
Trigger: TGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTC...ATGGAAGCTGGTAGGGAACTTAAAAGGCATGGGAGGGAGGACTGGACAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CCA 90 bp TCCATCTACATCACAACTATTCTTCACATATATAGCCTGCAAGAGTTCCCACGTGGGCTGCCTGCAGGGTaGCAGAGCCACTGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SIYITTILHIYSLQEFPRGLPAG*QSHWLW
Trigger: CCAGAGCCAGTGGCTCTGCCACCCTGCAGGCAGCCC...ACGTGGGAACTCTTGCAGGCTATATATGTGAAGAATAGTTGTGATGTAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CCA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTAAGCAAAGTTTCTTaGGGCCTGGAATACCATTCT +
Preference number: 2 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGLSKVS*GLEYHS
Trigger: AGAATGGTATTCCAGGCCCCAAGAAACTTTGCTTAG...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CAA 90 bp GAGAGACCTGCACTTCTGGGGATCCTGCACCGACCTACAGCTTCCTaGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCC +
Preference number: 2 (lower is better)
Translates to: ERPALLGILHRPTAS*KKFHSVCSMRSDIS
Trigger: GGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCTGTAGGTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp GGCTCGGCAGTAAGGAGCACTAGCTGTTCTTCCAGAGGAGCTGGGTTTAATTCCGCTTTGCTTTCCTCTTaGGAAAGCCACACTGTGTTG +
Preference number: 2 (lower is better)
Translates to: GSAVRSTSCSSRGAGFNSALLSS*ESHTVL
Trigger: CAACACAGTGTGGCTTTCTCAAGAGGAAAGCAAAGC...GGAATTAAACCCAGCTCCTCTGGAAGAACAGCTAGTGCTCCTTACTGCCGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 90 bp CTTTCACTTTCTGTGGTTTCCTTCACAGAAGCCTTTAGGACTGGCTaGCCTGGTCTGATAGTCCACCCCAAATGGATGTGTAGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: LSLSVVSFTEAFRTG*PGLIVHPKWMCSKV
Trigger: GACCTTGCTACACATCCATTTGGGGTGGACTATCAGACCAGGCAAGCCAGTCCTAAAGGCTTCTGTGAAGGAAACCACAGAAAGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp TCAAAGGCTAGGGCACCATCTTCCTCACCAAGCTTTCTATTTGTCCATCATCTGCAGTTCCAGGGGATCTaGCACCCTCACACACATACA +
Preference number: 2 (lower is better)
Translates to: SKARAPSSSPSFLFVHHLQFQGI*HPHTHT
Trigger: TGTATGTGTGTGAGGGTGTCAGATCCCCTGGAACTG...CAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATGGTGCCCTAGCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR GCA 90 bp TCCATCTACATCACAACTATTCTTCACATATATAGCCTGCAAGAGTTCCCACGTGCACTCCAAGCTGCCTaGACAGCAGGGAGGTGCACA +
Preference number: 2 (lower is better)
Translates to: SIYITTILHIYSLQEFPRALQAA*TAGRCT
Trigger: TGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGC...ACGTGGGAACTCTTGCAGGCTATATATGTGAAGAATAGTTGTGATGTAGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 90 bp CTTCATTCCCTCACTGTTCCTAGCCAGGGTGCCAAGCCCCAAGCCTaGAATGCCAAGGTACATAGGTTCATATATTTGAATGTTTGTCCC +
Preference number: 2 (lower is better)
Translates to: LHSLTVPSQGAKPQA*NAKVHRFIYLNVCP
Trigger: GGGACAAACATTCAAATATATGAACCTATGTACCTTGGCATTCAAGGCTTGGGGCTTGGCACCCTGGCTAGGAACAGTGAGGGAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 90 bp TGGATGTGTAGCAAGGTCAGAGTGAGCCGTTGTTCTAAGCAGTGCTaGGAGCTGGTCTGTCTCACAGGACACTACAATAAGGAAAAACTG +
Preference number: 2 (lower is better)
Translates to: WMCSKVRVSRCSKQC*ELVCLTGHYNKEKL
Trigger: CAGTTTTTCCTTATTGTAGTGTCCTGTGAGACAGACCAGCTCCAAGCACTGCTTAGAACAACGGCTCACTCTGACCTTGCTACACATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR GCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATACTGTGTTCAATGTCTaGCCAGCATGGACTTCTAAG +
Preference number: 2 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDTVFNV*PAWTSK
Trigger: CTTAGAAGTCCATGCTGGGCAGACATTGAACACAGT...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CCA 90 bp AGGCAAGTAGAACAATCCAGAACAGCCATGCTCACATCCTCAGAGAGATACAATAATACTCCCAGGCTCTaGGGTGACTGTGACACTCCA +
Preference number: 2 (lower is better)
Translates to: RQVEQSRTAMLTSSERYNNTPRL*GDCDTP
Trigger: TGGAGTGTCACAGTCACCCCAGAGCCTGGGAGTATT...ATTGTATCTCTCTGAGGATGTGAGCATGGCTGTTCTGGATTGTTCTACTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTCTGGAATCACCCTGTaGCTGGCTGGCACGCAGACA +
Preference number: 2 (lower is better)
Translates to: TRSTCIISTRKQKNTRTESGITL*LAGTQT
Trigger: TGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGA...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR-3UTR TCA 90 bp TGGCATGAATCATTACACTCATATGTACCAGGCTCAAGAGGAATGGCAATGCTTCAGCCAGCAACAGTCTaGGAAAGGTCTTCAGCGGTA +
Preference number: 2 (lower is better)
Translates to: WHESLHSYVPGSRGMAMLQPATV*ERSSAV
Trigger: TACCGCTGAAGACCTTTCTCAGACTGTTGCTGGCTG...AAGCATTGCCATTCCTCTTGAGCCTGGTACATATGAGTGTAATGATTCATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGGAATCACCCTGTGGCTaGCTGGCACGCAGACAAGTT +
Preference number: 2 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEESPCG*LARRQV
Trigger: AACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTC...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR-3UTR CCA 90 bp GTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTTCTGGAATCACCCTGTaGCTGGCTGGCACGCAGACA +
Preference number: 2 (lower is better)
Translates to: VYMHYKHSETKEHENRVLSGITL*LAGTQT
Trigger: TGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGA...AAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR CAA 90 bp GAGACAATCAAACCAATGACAGCACGAACTACAGAGCTAGGACATTaGAAAAGCAAAGAAGCCCAAGCAGGTCTGACCACCTTTCAAGCT +
Preference number: 2 (lower is better)
Translates to: ETIKPMTARTTELGH*KSKEAQAGLTTFQA
Trigger: AGCTTGAAAGGTGGTCAGACCTGCTTGGGCTTCTTTGCTTTTCAAATGTCCTAGCTCTGTAGTTCGTGCTGTCATTGGTTTGATTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp AACAATCCTCCGAGCCTTTTGTCTCTGGAGAAGGCTGGTTATAGCTATCAGGTACCAATATGTACCCAATaGTCAGTGGGAAAGGACACA +
Preference number: 2 (lower is better)
Translates to: NNPPSLLSLEKAGYSYQVPICTQ*SVGKDT
Trigger: TGTGTCCTTTCCCACTGATCATTGGGTACATATTGG...TACCTGATAGCTATAACCAGCCTTCTCCAGAGACAAAAGGCTCGGAGGATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR TCA 90 bp AAAGAAGAGCTCTTTCGGTGCAAGTACCTGTCTTTTCAGCCCATTCTACCAACATGTGTCCAAATGAAATaGGTGGGAGTGACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: KEELFRCKYLSFQPILPTCVQMK*VGVTVG
Trigger: TCCCACTGTCACTCCCACTCATTTCATTTGGACACA...TGTTGGTAGAATGGGCTGAAAAGACAGGTACTTGCACCGAAAGAGCTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp AGGCAAGTAGAACAATCCAGAACAGCCATGCTCACATCCTCAGAGAGATACAATCTGGGTTTAATTCCTTaGACCCTCATGGCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: RQVEQSRTAMLTSSERYNLGLIP*TLMAAH
Trigger: ATGAGCTGCCATGAGGGTGCAAGGAATTAAACCCAG...ATTGTATCTCTCTGAGGATGTGAGCATGGCTGTTCTGGATTGTTCTACTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CCA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATCAGATATACTTATCTTaGGCAGCATCAGCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNQIYLS*AASALL
Trigger: CAGCAGGGCTGATGCTGCCCAAGATAAGTATATCTG...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR TCA 90 bp AACAATCCTCCGAGCCTTTTGTCTCTGGAGAAGGCTGGTTATAGCTATCAGGTAAACCTGGTAACACACTaGAAATACAATCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: NNPPSLLSLEKAGYSYQVNLVTH*KYNLPG
Trigger: CCCAGGAAGATTGTATTTTCAGTGTGTTACCAGGTT...TACCTGATAGCTATAACCAGCCTTCTCCAGAGACAAAAGGCTCGGAGGATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR TCA 90 bp TACAGGGACTCTAGAAGAAACACGCTTTCATCTCAGTATGAAAGCAGGCAAACTTGTACACCATCATTTTaGGGACTCCAAGGCCAACTG +
Preference number: 2 (lower is better)
Translates to: YRDSRRNTLSSQYESRQTCTPSF*GLQGQL
Trigger: CAGTTGGCCTTGGAGTCCTCAAAATGATGGTGTACA...AGTTTGCCTGCTTTCATACTGAGATGAAAGCGTGTTTCTTCTAGAGTCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR TCA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTATTTACCAGAGCCTGTTaGTGGCTTTCTGAGACCACT +
Preference number: 2 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVFTRAC*WLSETT
Trigger: AGTGGTCTCAGAAAGCCATCAACAGGCTCTGGTAAA...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATACTCAGAGCCCTGAATaGAGGACAGTGAGACAATCA +
Preference number: 2 (lower is better)
Translates to: IYLSWAASALLRNPSFTNTQSPE*RTVRQS
Trigger: TGATTGTCTCACTGTCCTTCATTCAGGGCTCTGAGT...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp AAAGAAGAGCTCTTTCGGTGCAAGTACCTGTCTTTTCAGCCCATTCTACCAACACAAGGAAGTGCTTCCTaGCTTGTGCATTTTGTCTTG +
Preference number: 2 (lower is better)
Translates to: KEELFRCKYLSFQPILPTQGSAS*LVHFVL
Trigger: CAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTG...TGTTGGTAGAATGGGCTGAAAAGACAGGTACTTGCACCGAAAGAGCTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATAACAGAGATAATGGTTaGAGCAGATCTTCCACCGTC +
Preference number: 2 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNNRDNG*SRSSTV
Trigger: GACGGTGGAAGATCTGCTGCAACCATTATCTCTGTT...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 90 bp TGGCCCCTCATTGTGGATCAAGTAACAATTCATGTTACCATACCTTaGCTGTGCCACAATGAACTCAAAGCCTCTGAAACTATAACCCCA +
Preference number: 2 (lower is better)
Translates to: WPLIVDQVTIHVTIP*LCHNELKASETITP
Trigger: TGGGGTTATAGTTTCAGAGGCTTTGAGTTCATTGTGGCACAGCAAAGGTATGGTAACATGAATTGTTACTTGATCCACAATGAGGGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR TCA 90 bp CTTTACAATCCAATAAACTTCATCTTGGGAATGGGCACACAAAAACAAGCCTACGGAACCCCAAGTGAGTaGAGACCTGAGGGAATATTG +
Preference number: 2 (lower is better)
Translates to: LYNPINFILGMGTQKQAYGTPSE*RPEGIL
Trigger: CAATATTCCCTCAGGTCTTCACTCACTTGGGGTTCC...GTAGGCTTGTTTTTGTGTGCCCATTCCCAAGATGAAGTTTATTGGATTGTAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR GCA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTAATGCCTCAGCTCAACTaGCTGGATACCAAACAACAA +
Preference number: 2 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVMPQLN*LDTKQQ
Trigger: TTGTTGTTTGGTATCCAGGCAGTTGAGCTGAGGCAT...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR TCA 90 bp GAATGGGCACACAAAAACAAGCCTACAGGTAACACTCATGTAAACTTCCAGCTCCAGGGGAAATTGGCATaGATCATTACACTCATATGT +
Preference number: 2 (lower is better)
Translates to: EWAHKNKPTGNTHVNFQLQGKLA*IITLIC
Trigger: ACATATGAGTGTAATGATTCATGCCAATTTCCCCTG...GAGCTGGAAGTTTACATGAGTGTTACCTGTAGGCTTGTTTTTGTGTGCCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR TCA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATCCGTTGCATATCACATaGGAACTAGCAAATGGAAAT +
Preference number: 2 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNPLHIT*ELANGN
Trigger: ATTTCCATTTGCTAGTTCTCATGTGATATGCAACGG...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp CTTTACAATCCAATAAACTTCATCTTGGGAATGGGCACACAAAAACAAGCCTACGACCCTGATGAGCTTTaGTTTCCTCTTGAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: LYNPINFILGMGTQKQAYDPDEL*FPLEKA
Trigger: GGCTTTCTCAAGAGGAAAGCAAAGCTCATCAGGGTC...GTAGGCTTGTTTTTGTGTGCCCATTCCCAAGATGAAGTTTATTGGATTGTAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR GCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCAAAATTCCACAGTGTGTaGAGCATGAGGTCAGATATT +
Preference number: 2 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESKFHSV*SMRSDI
Trigger: AATATCTGACCTCATGCTGCACACACTGTGGAATTT...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CCA 90 bp TTGGAGTCCCATCAGAGGTGTACATTACTAACAATCCATGCTATAAGACTCTCCCTAAGCAAAGTTTCTTaGGGCCTGGAATACCATTCT +
Preference number: 2 (lower is better)
Translates to: LESHQRCTLLTIHAIRLSLSKVS*GLEYHS
Trigger: AGAATGGTATTCCAGGCCCCAAGAAACTTTGCTTAG...GGAGAGTCTTATAGCATGGATTGTTAGTAATGTACACCTCTGATGGGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp AACAATCCTCCGAGCCTTTTGTCTCTGGAGAAGGCTGGTTATAGCTATCAGGTAAAGATACATGCTGCTTaGTCCTCTTTAGTAGTAAAA +
Preference number: 2 (lower is better)
Translates to: NNPPSLLSLEKAGYSYQVKIHAA*SSLVVK
Trigger: TTTTACTACTAAAGAGGAGCAAGCAGCATGTATCTT...TACCTGATAGCTATAACCAGCCTTCTCCAGAGACAAAAGGCTCGGAGGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR GCA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATAGAACAAGGTCTACATaGATTATAAGCACTCGGAAA +
Preference number: 2 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNRTRST*IISTRK
Trigger: TTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCT...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR GCA 90 bp TCCATCTACATCACAACTATTCTTCACATATATAGCCTGCAAGAGTTCCCACGTTGTCTAACGTGTGTGTaGTCTAAGACAACAATGCAG +
Preference number: 2 (lower is better)
Translates to: SIYITTILHIYSLQEFPRCLTCV*SKTTMQ
Trigger: CTGCATTGTTGTCTTAGAGCACACACACGTTAGACA...ACGTGGGAACTCTTGCAGGCTATATATGTGAAGAATAGTTGTGATGTAGATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CCA 90 bp GAATGGGCACACAAAAACAAGCCTACAGGTAACACTCATGTAAACTTCCAGCTCAAAATACAATCTTCCTaGGCAATGCATGGGACTAAA +
Preference number: 2 (lower is better)
Translates to: EWAHKNKPTGNTHVNFQLKIQSS*AMHGTK
Trigger: TTTAGTCCCATGCATTGCCCAGGAAGATTGTATTTT...GAGCTGGAAGTTTACATGAGTGTTACCTGTAGGCTTGTTTTTGTGTGCCCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CCA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGTTCCTTGCACCCTCATaGCAGCTCATAACTGTCTGT +
Preference number: 2 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRFLAPS*QLITVC
Trigger: ACAGACAGTTATGAGCTGCCATGAGGGTGCAAGGAA...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CCA 90 bp AATTATTTCCCTTACAGAACTGCTCCTAAAGATTCCAGTTCCAGGGATATGACTCCACTTATAGACAACTaGTCAGTGTGGGCAAAGACT +
Preference number: 2 (lower is better)
Translates to: NYFPYRTAPKDSSSRDMTPLIDN*SVWAKT
Trigger: AGTCTTTGCCCACACTGACCAGTTGTCTATAAGTGG...AGTCATATCCCTGGAACTGGAATCTTTAGGAGCAGTTCTGTAAGGGAAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CCA 90 bp AATTATTTCCCTTACAGAACTGCTCCTAAAGATTCCAGTTCCAGGGATATGACTAGCTTAGTGTCCACCTaGAGAATTTGTATGTGTCCC +
Preference number: 2 (lower is better)
Translates to: NYFPYRTAPKDSSSRDMTSLVST*RICMCP
Trigger: GGGACACATACAAATTCTCCAGGTGGACACTAAGCT...AGTCATATCCCTGGAACTGGAATCTTTAGGAGCAGTTCTGTAAGGGAAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 90 bp AATGCCAAGGTACATAGGTTCATATATTTGAATGTTTGTCCCAGTTaGTGGAACTATTTGGGAAGGATTAGTAGGTGTGGCCTTGTTGGA +
Preference number: 2 (lower is better)
Translates to: NAKVHRFIYLNVCPS*WNYLGRISRCGLVG
Trigger: TCCAACAAGGCCACACCTACTAATCCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATGTACCTTGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR GCA 90 bp CTTTACAATCCAATAAACTTCATCTTGGGAATGGGCACACAAAAACAAGCCTACAATCTTCCTGGGCAATaGATGGGACTAAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: LYNPINFILGMGTQKQAYNLPGQ*MGLKSQ
Trigger: TTGAGACTTTAGTCCCATGCATTGCCCAGGAAGATT...GTAGGCTTGTTTTTGTGTGCCCATTCCCAAGATGAAGTTTATTGGATTGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR GCA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTAAGAACAAGGTCTACATaGATTATAAGCACTCGGAAA +
Preference number: 2 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVRTRST*IISTRK
Trigger: TTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCT...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp GGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTaGCCCTTAGTGTACCAAGCAGGCGTGAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GLRPSWVQPLQG*PLVYQAGVRQR
Trigger: CCTCTGCCTCACGCCTGCTTGGTACACTAAGGGCCAGCCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp GCCAGGAAAACTAGGCCAAGAGGGCTGCCTGCAGGGTaGCAGAGCCACTGGCTCTGGAGTGCCCAGTGCTTG +
Preference number: 3 (lower is better)
Translates to: ARKTRPRGLPAG*QSHWLWSAQCL
Trigger: CAAGCACTGGGCACTCCAGAGCCAGTGGCTCTGCCACCCTGCAGGCAGCCCTCTTGGCCTAGTTTTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 72 bp GCTGGCCCTGGCGCAGACATCCACAGTGCTCCCTCCTaGCAGAGGGAGCCTGACTCAAGTGAGTATCAGTGG +
Preference number: 3 (lower is better)
Translates to: AGPGADIHSAPS*QREPDSSEYQW
Trigger: CCACTGATACTCACTTGAGTCAGGCTCCCTCTGGCAGGAGGGAGCACTGTGGATGTCTGCGCCAGGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp GCCCCCAGGGTGGCCCACAGCTCGGGCACAAGGAAGTaGTTCCTGACTTGTGCATTTTGTCTTGGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: APRVAHSSGTRK*FLTCAFCLGSE
Trigger: CTCTGACCCAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCCACCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp CAGCGCACTCCCAGCAACACAGCCTGCACTCCAAGCTaGCTGCACAGCAGGGAGGTGCACAAACATTACACG +
Preference number: 3 (lower is better)
Translates to: QRTPSNTACTPS*LHSREVHKHYT
Trigger: CGTGTAATGTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGGGAGTGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp GGAGTGACAGTGGGAGACCAGTTGACAGCACTTAGATaGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GVTVGDQLTALR*AKAKLGTAPAG
Trigger: CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTGGTCTCCCACTGTCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp CAAAAGGGTCAGAGAAACTGCACATGTGGCTGGCCCTaGCGCAGACATCCACAGTGCTCCCTCCTGCCAGAG +
Preference number: 3 (lower is better)
Translates to: QKGQRNCTCGWP*RRHPQCSLLPE
Trigger: CTCTGGCAGGAGGGAGCACTGTGGATGTCTGCGCCAGGGCCAGCCACATGTGCAGTTTCTCTGACCCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp CCACACTCCTCCACAGCAAGCCATGGGCACAGGACCTaGACAAGCAGCTACCTATTTGGATTGGGTGGGGAC +
Preference number: 3 (lower is better)
Translates to: PHSSTASHGHRT*TSSYLFGLGGD
Trigger: GTCCCCACCCAATCCAAATAGGTAGCTGCTTGTGCAGGTCCTGTGCCCATGGCTTGCTGTGGAGGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp GCACTCCCAGCAACACAGCCTGCACTCCAAGCTGCCTaGACAGCAGGGAGGTGCACAAACATTACACGACGA +
Preference number: 3 (lower is better)
Translates to: ALPATQPALQAA*TAGRCTNITRR
Trigger: TCGTCGTGTAATGTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp TCAAGGCAAAAGGGTCAGAGAAACTGCACATGTGGCTaGCCCTGGCGCAGACATCCACAGTGCTCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: SRQKGQRNCTCG*PWRRHPQCSLL
Trigger: CAGGAGGGAGCACTGTGGATGTCTGCGCCAGGGCCAGCCACATGTGCAGTTTCTCTGACCCTTTTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 72 bp GGGTGGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTaGCTTGTGCATTTTGTCTTGGGTCAGAGGACACAG +
Preference number: 3 (lower is better)
Translates to: GWPTARAQGSAS*LVHFVLGQRTQ
Trigger: CTGTGTCCTCTGACCCAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTaGACTTCTGGGGATCCTGCACCGACCTACAGCTTC +
Preference number: 3 (lower is better)
Translates to: RRQVGKLQTGET*TSGDPAPTYSF
Trigger: GAAGCTGTAGGTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp TCCTGCCAGAGGGAGCCTGACTCAAGTGAGTATCAGTaGCCACTGCAGACGTGGAAGCCACAGAAATGGAGG +
Preference number: 3 (lower is better)
Translates to: SCQREPDSSEYQ*PLQTWKPQKWR
Trigger: CCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGTCAGGCTCCCTCTGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 72 bp GTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTaGGCTCCTCGGTCAACAGCGGTGTCGAAGAGGATG +
Preference number: 3 (lower is better)
Translates to: VFLGISSHSKWP*APRSTAVSKRM
Trigger: CATCCTCTTCGACACCGCTGTTGACCGAGGAGCTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp CATGTGACTGGCAGAAACAGTGAGGCCAGAGGAAAGTaGGGTGGTGTCTCGTGGTTTCTAAGCAGCCAGCGC +
Preference number: 3 (lower is better)
Translates to: HVTGRNSEARGK*GGVSWFLSSQR
Trigger: GCGCTGGCTGCTTAGAAACCACGAGACACCACCTCACTTTCCTCTGGCCTCACTGTTTCTGCCAGTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp GGTGGCAGAGCCACTGGCTCTGGAGTGCCCAGTGCTTaGCTAGCTAGCAATCTGAGCGTTTCTGTTGAAACA +
Preference number: 3 (lower is better)
Translates to: GGRATGSGVPSA*LASNLSVSVET
Trigger: TGTTTCAACAGAAACGCTCAGATTGCTAGCTAGGCAAGCACTGGGCACTCCAGAGCCAGTGGCTCTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp GGATGCAAAGCCAGAGCTGGGGCCAACAAGCAGAAGTaGGAATTCAAGCTGATTCTCGGGCAGGGAAACAGC +
Preference number: 3 (lower is better)
Translates to: GCKARAGANKQK*EFKLILGQGNS
Trigger: GCTGTTTCCCTGCCCGAGAATCAGCTTGAATTCCCACTTCTGCTTGTTGGCCCCAGCTCTGGCTTTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp ACAAGGCAGCGCTGCTGCACCTGGAAACGAAACATCTaGATTGAAGCCTGGGAGGGAAGTCCTCACAGAGGA +
Preference number: 3 (lower is better)
Translates to: TRQRCCTWKRNI*IEAWEGSPHRG
Trigger: TCCTCTGTGAGGACTTCCCTCCCAGGCTTCAATCCAGATGTTTCGTTTCCAGGTGCAGCAGCGCTGCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp CCTCAGCTCAACTGCCTGGATACCAAACAACAACTGTaGCCCCCAATGCTCCTTGCCAGCACACAGTGTCAT +
Preference number: 3 (lower is better)
Translates to: PQLNCLDTKQQL*PPMLLASTQCH
Trigger: ATGACACTGTGTGCTGGCAAGGAGCATTGGGGGGCACAGTTGTTGTTTGGTATCCAGGCAGTTGAGCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 72 bp CCCACACCTGTAAAAAGTAAAGAACAAGTGGTTATCTaGTCCTCAGCGGCCGGTCAGTGTGGGGTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PTPVKSKEQVVI*SSAAGQCGVAA
Trigger: TGCAGCCACCCCACACTGACCGGCCGCTGAGGAGCAGATAACCACTTGTTCTTTACTTTTTACAGGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp TGCTGCACCTGGAAACGAAACATCTGGATTGAAGCCTaGGAGGGAAGTCCTCACAGAGGACACAGCTCAGGA +
Preference number: 3 (lower is better)
Translates to: CCTWKRNIWIEA*EGSPHRGHSSG
Trigger: TCCTGAGCTGTGTCCTCTGTGAGGACTTCCCTCCCAGGCTTCAATCCAGATGTTTCGTTTCCAGGTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CAA 90 bp TGGTGTCTCGTGGTTTCTAAGCAGCCAGCGCACTCCCAGCAACACAGCCTGCACCAGCAGGAGGTATACTaGGGATCCAATATGAATCAG +
Preference number: 3 (lower is better)
Translates to: WCLVVSKQPAHSQQHSLHQQEVY*GSNMNQ
Trigger: CTGATTCATATTGGATCCCAAGTATACCTCCTGCTG...GTGCAGGCTGTGTTGCTGGGAGTGCGCTGGCTGCTTAGAAACCACGAGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp CCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTTGTaGATTTTGTCTTGGGTCAGAGGACACAGAGAAGAC +
Preference number: 3 (lower is better)
Translates to: PQLGHKEVLPDL*ILSWVRGHRED
Trigger: GTCTTCTCTGTGTCCTCTGACCCAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp AGAGGGAGCCTGACTCAAGTGAGTATCAGTGGCCACTaGAGACGTGGAAGCCACAGAAATGGAGGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: RGSLTQVSISGH*RRGSHRNGGKE
Trigger: TTCTTTCCCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGTCAGGCTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp CCATGGGCACAGGACCTGCACAAGCAGCTACCTATTTaGATTGGGTGGGGACTGCCTCAGAATCTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: PWAQDLHKQLPI*IGWGLPQNLLK
Trigger: TTTCAAGAGATTCTGAGGCAGTCCCCACCCAATCCAAATAGGTAGCTGCTTGTGCAGGTCCTGTGCCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CAA 90 bp AAAGAAGAGCTCTTTCGGTGCAAGTACCTGTCTTTTCAGCCCATTCTACCAACACTGTGGGGAGGGGTCTaGTTCTTGTCTACCCTGCGC +
Preference number: 3 (lower is better)
Translates to: KEELFRCKYLSFQPILPTLWGGV*FLSTLR
Trigger: GCGCAGGGTAGACAAGAACAAGACCCCTCCCCACAG...TGTTGGTAGAATGGGCTGAAAAGACAGGTACTTGCACCGAAAGAGCTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 72 bp CTCTGGGGTGACTGTGACACTCCAATATGTACCCAATaGTCAGTGGGAAAGGACACAGAGTGTACAGAGGGG +
Preference number: 3 (lower is better)
Translates to: LWGDCDTPICTQ*SVGKDTECTEG
Trigger: CCCCTCTGTACACTCTGTGTCCTTTCCCACTGATCATTGGGTACATATTGGAGTGTCACAGTCACCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp TCCAGAGCTCCCTCCTTATTACCCAGCGACAGTAGATaGCAACAGACCTCTGTCTCCTCCATCCTACCAAGA +
Preference number: 3 (lower is better)
Translates to: SRAPSLLPSDSR*QQTSVSSILPR
Trigger: TCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTAATAAGGAGGGAGCTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp TGGTTGCAGCAGATCTTCCACCGTCTGACTTCCCTGTaGGAAGGACACTGCAAGTGGGGAATGCTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: WLQQIFHRLTSL*EGHCKWGMLFL
Trigger: TAGAAAGAGCATTCCCCACTTGCAGTGTCCTTCTCACAGGGAAGTCAGACGGTGGAAGATCTGCTGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp TTGTCCCCACCCCTACTCTCTACCTCAGGACAGATGTaGGAGTCAGTCCTTCAACCTCTGGAACTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: LSPPLLSTSGQM*ESVLQPLELVN
Trigger: GTTCACAAGTTCCAGAGGTTGAAGGACTGACTCTCACATCTGTCCTGAGGTAGAGAGTAGGGGTGGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 72 bp AAAGCACGGCAGTGTCACTCATACAGGAAGAGCATGTaGCTGGCAGAAACAGTGAGGCCAGAGGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: KARQCHSYRKSM*LAETVRPEESE
Trigger: CTCACTTTCCTCTGGCCTCACTGTTTCTGCCAGTCACATGCTCTTCCTGTATGAGTGACACTGCCGTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp GGAGTCAGGAGTCCACTTATAGACAACTGGTCAGTGTaGGCAAAGACTAGCAGCTTCTTCCTCCTCCCAGAT +
Preference number: 3 (lower is better)
Translates to: GVRSPLIDNWSV*AKTSSFFLLPD
Trigger: ATCTGGGAGGAGGAAGAAGCTGCTAGTCTTTGCCCACACTGACCAGTTGTCTATAAGTGGACTCCTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CCA 72 bp CAACTGGGCATGAGAGTAAGGATGCAAAGCCAGAGCTaGGGCCAACAAGCAGAAGTGGGAATTCAAGCTGAT +
Preference number: 3 (lower is better)
Translates to: QLGMRVRMQSQS*GQQAEVGIQAD
Trigger: ATCAGCTTGAATTCCCACTTCTGCTTGTTGGCCCCAGCTCTGGCTTTGCATCCTTACTCTCATGCCCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CAA 90 bp TCAAAGGCTAGGGCACCATCTTCCTCACCAAGCTTTCTATTTGTCCATCATCTGGCCAAGCCCCAAGCCTaGAATGCCAAGGTACATAGG +
Preference number: 3 (lower is better)
Translates to: SKARAPSSSPSFLFVHHLAKPQA*NAKVHR
Trigger: CCTATGTACCTTGGCATTCAAGGCTTGGGGCTTGGC...CAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATGGTGCCCTAGCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CAA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGTGGCACGCAGACAAGTaGGCAAACTGCAGACTGGAG +
Preference number: 3 (lower is better)
Translates to: AWTSKGCFVESKSHLLESWHADK*ANCRLE
Trigger: CTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp GGACTCCAAGGCCAACTGACCCAGGGGAAATTGGCATaGATCATTACACTCATATGTACCAGGCTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: GLQGQLTQGKLA*IITLICTRLKR
Trigger: CCTCTTGAGCCTGGTACATATGAGTGTAATGATTCATGCCAATTTCCCCTGGGTCAGTTGGCCTTGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp AACAGAGATAATGGTTGCAGCAGATCTTCCACCGTCTaGCTTCCCTGTGAGAAGGACACTGCAAGTGGGGAA +
Preference number: 3 (lower is better)
Translates to: NRDNGCSRSSTV*LPCEKDTASGE
Trigger: TTCCCCACTTGCAGTGTCCTTCTCACAGGGAAGTCAGACGGTGGAAGATCTGCTGCAACCATTATCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR GCA 72 bp GGAGTCCCATCAGAGGTGTACATTACTAACAATCCATaGTATAAGACTCTCCTTACCCACCGGAGCGACCAC +
Preference number: 3 (lower is better)
Translates to: GVPSEVYITNNP*YKTLLTHRSDH
Trigger: GTGGTCGCTCCGGTGGGTAAGGAGAGTCTTATAGCATGGATTGTTAGTAATGTACACCTCTGATGGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp GCTTTCCTTGGAGTCAGGAGTCCACTTATAGACAACTaGTCAGTGTGGGCAAAGACTAGCAGCTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: AFLGVRSPLIDN*SVWAKTSSFFL
Trigger: GAGGAAGAAGCTGCTAGTCTTTGCCCACACTGACCAGTTGTCTATAAGTGGACTCCTGACTCCAAGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CCA 72 bp AGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTaGCTGGCACGCAGACAAGTTGGCAAACTGCAGACT +
Preference number: 3 (lower is better)
Translates to: SLNSSLLESPCG*LARRQVGKLQT
Trigger: AGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR CCA 72 bp AAGCCACAGAAATGGAGGGAAAGAACATGCACTGGGTaGGGGAACAGTCACAACACCTTAGGTGTTGTCAAC +
Preference number: 3 (lower is better)
Translates to: KPQKWRERTCTG*GNSHNTLGVVN
Trigger: GTTGACAACACCTAAGGTGTTGTGACTGTTCCCCCACCCAGTGCATGTTCTTTCCCTCCATTTCTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp TGTGGGGTGGCTGCAACCCGCTGTCTAACGTGTGTGTaGTCTAAGACAACAATGCAGAATGCAAAATGTGTT +
Preference number: 3 (lower is better)
Translates to: CGVAATRCLTCV*SKTTMQNAKCV
Trigger: AACACATTTTGCATTCTGCATTGTTGTCTTAGAGCACACACACGTTAGACAGCGGGTTGCAGCCACCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp CATCTTCCTCACCAAGCTTTCTATTTGTCCATCATCTaGGAATGTACAAGCCCTGTCGGGAAGCTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: HLPHQAFYLSII*ECTSPVGKLPL
Trigger: GAGAGGAAGCTTCCCGACAGGGCTTGTACATTCCCAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CAA 90 bp AGGCAAGTAGAACAATCCAGAACAGCCATGCTCACATCCTCAGAGAGATACAATTTCCCAGTGTCTGTGTaGTTCTCTCTGGCCCCTCAT +
Preference number: 3 (lower is better)
Translates to: RQVEQSRTAMLTSSERYNFPVSV*FSLAPH
Trigger: ATGAGGGGCCAGAGAGAACAACACAGACACTGGGAA...ATTGTATCTCTCTGAGGATGTGAGCATGGCTGTTCTGGATTGTTCTACTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp GCCCAAAGGAAACTCAGAGCCCTGAATGAAGGACAGTaGGACAATCAAACCAATGACAGCACGAACTACAGA +
Preference number: 3 (lower is better)
Translates to: AQRKLRALNEGQ*DNQTNDSTNYR
Trigger: TCTGTAGTTCGTGCTGTCATTGGTTTGATTGTCTCACTGTCCTTCATTCAGGGCTCTGAGTTTCCTTTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp CAGAATTTGGTGAAGTGTCTAAGGTTCTCCCATAATTaGGTTAAGCTCCTAGTGGCTTCCTCTGTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: QNLVKCLRFSHN*VKLLVASSVGR
Trigger: CCTCCCCACAGAGGAAGCCACTAGGAGCTTAACTCAATTATGGGAGAACCTTAGACACTTCACCAAATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp ATGTACCAGGCTCAAGAGGAATGGCAATGCTTTCCTTaGAGTCAGGAGTCCACTTATAGACAACTGGTCAGT +
Preference number: 3 (lower is better)
Translates to: MYQAQEEWQCFP*SQESTYRQLVS
Trigger: ACTGACCAGTTGTCTATAAGTGGACTCCTGACTCCAAGGAAAGCATTGCCATTCCTCTTGAGCCTGGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CCA 72 bp TGCAAGAGTTCCCACGTAGTTAATGCAAAGGATAACTaGAGGAAAGCACGGCAGTGTCACTCATACAGGAAG +
Preference number: 3 (lower is better)
Translates to: CKSSHVVNAKDN*RKARQCHSYRK
Trigger: CTTCCTGTATGAGTGACACTGCCGTGCTTTCCTCCAGTTATCCTTTGCATTAACTACGTGGGAACTCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CAA 90 bp TTGGAGTCCCATCAGAGGTGTACATTACTAACAATCCATGCTATAAGACTCTCCTGTTCTAAGCAGTGCTaGGAGCTGGTCTGTCTCACA +
Preference number: 3 (lower is better)
Translates to: LESHQRCTLLTIHAIRLSCSKQC*ELVCLT
Trigger: TGTGAGACAGACCAGCTCCAAGCACTGCTTAGAACA...GGAGAGTCTTATAGCATGGATTGTTAGTAATGTACACCTCTGATGGGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR TCA 72 bp ACCGTTGCATATCACATGAGAACTAGCAAATGGAAATaGTTATGGAAAACCCACCTCCCAGGCCATCAGCCA +
Preference number: 3 (lower is better)
Translates to: TVAYHMRTSKWK*LWKTHLPGHQP
Trigger: TGGCTGATGGCCTGGGAGGTGGGTTTTCCATAATCATTTCCATTTGCTAGTTCTCATGTGATATGCAACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CCA 72 bp GTGACTGTGACACTCCAATATGTACCCAATGATCAGTaGGAAAGGACACAGAGTGTACAGAGGGGTTTTAGT +
Preference number: 3 (lower is better)
Translates to: VTVTLQYVPNDQ*ERTQSVQRGFS
Trigger: ACTAAAACCCCTCTGTACACTCTGTGTCCTTTCCCACTGATCATTGGGTACATATTGGAGTGTCACAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CCA 72 bp CAGCAGGAGGTATACTTGGGATCCAATATGAATCAGTaGATTGCTCTGGTTCTAGTACACAAAGCCATGGGT +
Preference number: 3 (lower is better)
Translates to: QQEVYLGSNMNQ*IALVLVHKAMG
Trigger: ACCCATGGCTTTGTGTACTAGAACCAGAGCAATCCACTGATTCATATTGGATCCCAAGTATACCTCCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR-3UTR CAA 90 bp AGGCAAGTAGAACAATCCAGAACAGCCATGCTCACATCCTCAGAGAGATACAATCATGTTACCATACCTTaGCTGTGCCACAATGAACTC +
Preference number: 3 (lower is better)
Translates to: RQVEQSRTAMLTSSERYNHVTIP*LCHNEL
Trigger: GAGTTCATTGTGGCACAGCAAAGGTATGGTAACATG...ATTGTATCTCTCTGAGGATGTGAGCATGGCTGTTCTGGATTGTTCTACTTGCCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CAA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATGGCACGCAGACAAGTaGGCAAACTGCAGACTGGAG +
Preference number: 3 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQWHADK*ANCRLE
Trigger: CTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR TCA 72 bp ATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTaGTGGCTTTCTGAGACCACTCCAGTTAAGCCTGGT +
Preference number: 3 (lower is better)
Translates to: ITHFYLCFTRAC*WLSETTPVKPG
Trigger: ACCAGGCTTAACTGGAGTGGTCTCAGAAAGCCATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp CAAGTAAGGCATCTAACAAATGTCCCTTCTGACACCTaGTACCAGCAGGAGGTATACTTGGGATCCAATATG +
Preference number: 3 (lower is better)
Translates to: QVRHLTNVPSDT*YQQEVYLGSNM
Trigger: CATATTGGATCCCAAGTATACCTCCTGCTGGTATCAGGTGTCAGAAGGGACATTTGTTAGATGCCTTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp TACACTCATATGTACCAGGCTCAAGAGGAATGGCAATaGTTTCCTTGGAGTCAGGAGTCCACTTATAGACAA +
Preference number: 3 (lower is better)
Translates to: YTHMYQAQEEWQ*FPWSQESTYRQ
Trigger: TTGTCTATAAGTGGACTCCTGACTCCAAGGAAAGCATTGCCATTCCTCTTGAGCCTGGTACATATGAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR GCA 72 bp CACCATACCACAATGTCTTCTAAGACATCCTATGAATaGCTCAGCTCAACTGCCTGGATACCAAACAACAAC +
Preference number: 3 (lower is better)
Translates to: HHTTMSSKTSYE*LSSTAWIPNNN
Trigger: GTTGTTGTTTGGTATCCAGGCAGTTGAGCTGAGGCATTCATAGGATGTCTTAGAAGACATTGTGGTATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CAA 90 bp TACAGGGACTCTAGAAGAAACACGCTTTCATCTCAGTATGAAAGCAGGCAAACTATGTACACCATCATTTaGAGGACTCCAAGGCCAACT +
Preference number: 3 (lower is better)
Translates to: YRDSRRNTLSSQYESRQTMYTII*RTPRPT
Trigger: AGTTGGCCTTGGAGTCCTCAAAATGATGGTGTACAT...AGTTTGCCTGCTTTCATACTGAGATGAAAGCGTGTTTCTTCTAGAGTCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp CCTGAGTGTGTCCTAGTGTCAGTCCATTCTAGAGTATaGCTCAAAACACTGAAGCATTCAAGGGAGAAACAT +
Preference number: 3 (lower is better)
Translates to: PECVLVSVHSRV*LKTLKHSREKH
Trigger: ATGTTTCTCCCTTGAATGCTTCAGTGTTTTGAGTCATACTCTAGAATGGACTGACACTAGGACACACTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp GAAATATCTATCAACATTTCCTGTGTCCAAATGAAATaGGTGGGAGTGACAGTGGGAGACCAGTTGACAGCA +
Preference number: 3 (lower is better)
Translates to: EISINISCVQMK*VGVTVGDQLTA
Trigger: TGCTGTCAACTGGTCTCCCACTGTCACTCCCACTCATTTCATTTGGACACAGGAAATGTTGATAGATATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp AATCATTACACTCATATGTACCAGGCTCAAGAGGAATaGCAATGCTTTCCTTGGAGTCAGGAGTCCACTTAT +
Preference number: 3 (lower is better)
Translates to: NHYTHMYQAQEE*QCFPWSQESTY
Trigger: ATAAGTGGACTCCTGACTCCAAGGAAAGCATTGCCATTCCTCTTGAGCCTGGTACATATGAGTGTAATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CAA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATGAAACAGGTGGCACTTaGGAGGTATTTATAAGAAGC +
Preference number: 3 (lower is better)
Translates to: IYLSWAASALLRNPSFTNETGGT*EVFIRS
Trigger: GCTTCTTATAAATACCTCCAAAGTGCCACCTGTTTC...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp TTTCTTCTAAAGTCCAAGCAGAACCTGGTAACACACTaGAAATACAATCTTCCTGGGCAATGCATGGGACTA +
Preference number: 3 (lower is better)
Translates to: FLLKSKQNLVTH*KYNLPGQCMGL
Trigger: TAGTCCCATGCATTGCCCAGGAAGATTGTATTTTCAGTGTGTTACCAGGTTCTGCTTGGACTTTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp ACCCTCAGCCTCCTATATGGCGTCTATCTTGTCCAATaGGAGCTAACATATTACCAAACTCACCAATTTAAC +
Preference number: 3 (lower is better)
Translates to: TLSLLYGVYLVQ*ELTYYQTHQFN
Trigger: GTTAAATTGGTGAGTTTGGTAATATGTTAGCTCTCATTGGACAAGATAGACGCCATATAGGAGGCTGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CCA 72 bp AGTGTCATCTCAGAATCAATCCTAAGCAAAGTTTCTTaGGGCCTGGAATACCATTCTCCAGTTGTTAAAACG +
Preference number: 3 (lower is better)
Translates to: SVISESILSKVS*GLEYHSPVVKT
Trigger: CGTTTTAACAACTGGAGAATGGTATTCCAGGCCCCAAGAAACTTTGCTTAGGATTGATTCTGAGATGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR-3UTR CAA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGAGCTTTGCTTTCCTCTaGAGAAAGCCACACTGTGTT +
Preference number: 3 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRSFAFL*RKPHCV
Trigger: AACACAGTGTGGCTTTCTCAAGAGGAAAGCAAAGCT...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR GCA 72 bp AATCACATAGCAGGATCACGAAGAACAAGGTCTACATaGATTATAAGCACTCGGAAACAAAAGAACACGAGA +
Preference number: 3 (lower is better)
Translates to: NHIAGSRRTRST*IISTRKQKNTR
Trigger: TCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR TCA 72 bp TGTGTGTGCCAGTTGTTAAAATGTTGGCAACTTAATTaGAAACGTAATGTAAAACTTCAGCTGTGGGCACAC +
Preference number: 3 (lower is better)
Translates to: CVCQLLKCWQLN*KRNVKLQLWAH
Trigger: GTGTGCCCACAGCTGAAGTTTTACATTACGTTTTCAATTAAGTTGCCAACATTTTAACAACTGGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR TCA 72 bp GATTCAGATAACCATCTTGGACCGTTGCATATCACATaGGAACTAGCAAATGGAAATGATTATGGAAAACCC +
Preference number: 3 (lower is better)
Translates to: DSDNHLGPLHIT*ELANGNDYGKP
Trigger: GGGTTTTCCATAATCATTTCCATTTGCTAGTTCTCATGTGATATGCAACGGTCCAAGATGGTTATCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR GCA 72 bp GATCAAGTAACAATTCATGTTACCATACCTTTGCTGTaGCACAATGAACTCAAAGCCTCTGAAACTATAACC +
Preference number: 3 (lower is better)
Translates to: DQVTIHVTIPLL*HNELKASETIT
Trigger: GGTTATAGTTTCAGAGGCTTTGAGTTCATTGTGGCACAGCAAAGGTATGGTAACATGAATTGTTACTTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CCA 72 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTaGAACTATTTGGGAAGGATTAGTAGGTGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: HRFIYLNVCPSL*NYLGRISRCGL
Trigger: AAGGCCACACCTACTAATCCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR-3UTR CAA 90 bp AATTATTTCCCTTACAGAACTGCTCCTAAAGATTCCAGTTCCAGGGATATGACTAAAGATACATGCTGCTaGCTCCTCTTTAGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: NYFPYRTAPKDSSSRDMTKDTCC*LLFSSK
Trigger: TTTACTACTAAAGAGGAGCAAGCAGCATGTATCTTT...AGTCATATCCCTGGAACTGGAATCTTTAGGAGCAGTTCTGTAAGGGAAATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp TTAATAACTGTGATGTGTAGAATTTGTGTTAGTGGATaGAGGCAGCTTAGTGTCCACCTGGAGAATTTGTAT +
Preference number: 3 (lower is better)
Translates to: LITVMCRICVSG*RQLSVHLENLY
Trigger: ATACAAATTCTCCAGGTGGACACTAAGCTGCCTTCATCCACTAACACAAATTCTACACATCACAGTTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR TCA 72 bp CAGAACAGCCATGCTCACATCCTCAGAGAGATACAATaGATATTAATAACTGTGATGTGTAGAATTTGTGTT +
Preference number: 3 (lower is better)
Translates to: QNSHAHILREIQ*ILITVMCRICV
Trigger: AACACAAATTCTACACATCACAGTTATTAATATTCATTGTATCTCTCTGAGGATGTGAGCATGGCTGTTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR GCA 72 bp GTTGAGAACTCTTTTCTAGCCTGTACTGAAGATAAGTaGAACCATTATCAAATATTCTTTGCTGTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: VENSFLACTEDK*NHYQIFFAVEK
Trigger: TTTTTCCACAGCAAAGAATATTTGATAATGGTTGCACTTATCTTCAGTACAGGCTAGAAAAGAGTTCTCAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGTGCAGGATCCCCACTaGGCCTGGGGGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LARRQVGKLQTGETCTSGVQDPH*AWGLQG
Trigger: GCCCTGCAGCCCCCAGGCCCAGTGGGGATCCTGCAC...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGACCCGGCCCATGGGACCTaGCACTCCTCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SWQTADWRDLHFWGSCTDPAHGT*HSSSSS
Trigger: GGACGAGGACGAGGAGTGGCAGGTCCCATGGGCCGG...GTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CCAGCAACACAGCCTGCACTCCAAGCTGCCTGCACAGCAGGGAGGTGCACAAACGCTGAGGAACCCCCTTaGTCAGCGTCACCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PATQPALQAACTAGRCTNAEEPP*SASPCG
Trigger: CCCGCAAGGTGACGCTGACCAAGGGGGTTCCTCAGC...GTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp CCCCAGGGTGGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTTGTGCATTACTGCGGCTGAGACATaGGCATCAGAGGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PQGGPQLGHKEVLPDLCITAAET*ASEEGE
Trigger: CTCCCCCTCCTCTGATGCCCATGTCTCAGCCGCAGT...AATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCCACCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR GCA 90 bp GTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACCAAGCAGGCGTGAGGCAGAGGTCGCTCTCTCCTCCCTaGCCTCCAGACAACTTAATC +
Preference number: 4 (lower is better)
Translates to: VQPLQGWPLVYQAGVRQRSLSPP*PPDNLI
Trigger: GATTAAGTTGTCTGGAGGGCAGGGAGGAGAGAGCGA...CCTCTGCCTCACGCCTGCTTGGTACACTAAGGGCCAGCCCTGCAGGGGCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCCATGTGCACTCCCTGTaGTGGGGAGGGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCHVHSL*WGGVMR
Trigger: CCGCATCACCCCTCCCCACCACAGGGAGTGCACATG...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGAGGCCTCGGCTGGCTTaGAACTGGCAGCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LARRQVGKLQTGETCTSGRPRLA*NWQQGH
Trigger: GTGCCCTTGCTGCCAGTTCCAAGCCAGCCGAGGCCT...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGTTCCTGAGGTGGGGGTaGGGCTCTCCACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLFLRWG*GSPLVL
Trigger: CAGGACCAGTGGAGAGCCCCACCCCCACCTCAGGAA...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCGCATCCGACTGCTGCTaGGCTGTGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCASDCC*AVAGQS
Trigger: AGACTGCCCAGCCACAGCCCAGCAGCAGTCGGATGC...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCGGCCTGTGGGGAGTaGGGGGTCTCCTCCATATCC +
Preference number: 4 (lower is better)
Translates to: RRQVGKLQTGETCTSGDPAACGE*GVSSIS
Trigger: GGATATGGAGGAGACCCCCCACTCCCCACAGGCCGC...AGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAAGGGATGTCACTCTaGCGGCCTGTGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLEGMSL*RPVGSG
Trigger: CCCACTCCCCACAGGCCGCCAGAGTGACATCCCTTC...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp GTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACCAAGCAGGCGTGAGGCAGAGGATTCTGCCTGCATTGTaGCCCTGGAAAGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: VQPLQGWPLVYQAGVRQRILPAL*PWKGQQ
Trigger: TTGTTGCCCTTTCCAGGGGCACAATGCAGGCAGAAT...CCTCTGCCTCACGCCTGCTTGGTACACTAAGGGCCAGCCCTGCAGGGGCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CCCCAGGGTGGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTTGTGCATTTCCATTCCTCCCTCGTaGGTCTCAGAAGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: PQGGPQLGHKEVLPDLCISIPPS*VSEATW
Trigger: CCAGGTTGCTTCTGAGACCCACGAGGGAGGAATGGA...AATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCCACCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp ACAAGGCAGAGAGAGGGAAAGTACCTTGTCCCCACCCCTACTCTCTACCTCAGGGGGCCTGGAAATCTTTaGGGTCCCACGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRQREGKYLVPTPTLYLRGPGNL*GPTAGL
Trigger: GAGGCCTGCCGTGGGACCCCAAAGATTTCCAGGCCC...CCTGAGGTAGAGAGTAGGGGTGGGGACAAGGTACTTTCCCTCTCTCTGCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR TCA 90 bp AGCTGTGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTGAGCTGATTGGCTGCTGCTaGGGTGGTGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SCGHTCSWVSHHTQSGPELIGCC*GGGGGG
Trigger: ACCACCACCACCACCACCTCAGCAGCAGCCAATCAG...CTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp AAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGAGGCCTGAACTGCGGCTaGGACATGGGCATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KLANCRLERPALLGILHRGLNCG*DMGIRG
Trigger: TCCTCTGATGCCCATGTCTCAGCCGCAGTTCAGGCC...TCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCTCTGTACATGCGGCCTaGACTGCGGCTGAGACATGG +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCSVHAA*TAAETW
Trigger: CCATGTCTCAGCCGCAGTTCAGGCCGCATGTACAGA...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGTTATGCCGGAGCCCCTaGTGTGGGGTACACTGCATC +
Preference number: 4 (lower is better)
Translates to: LARRQVGKLQTGETCTSGLCRSP*CGVHCI
Trigger: GATGCAGTGTACCCCACATCAGGGGCTCCGGCATAA...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACCAAGCAGGCGTGAGGCAGAGGGTCAACTCTGCATCATaGCCTTCATACTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VQPLQGWPLVYQAGVRQRVNSAS*PSYCPS
Trigger: GGAAGGACAGTATGAAGGCCATGATGCAGAGTTGAC...CCTCTGCCTCACGCCTGCTTGGTACACTAAGGGCCAGCCCTGCAGGGGCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCGTTGCTGACCCTGGCTaGCTAAAGTGCAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCVADPG*LKCRIP
Trigger: GGGGATCCTGCACTTTAGCCAGCCAGGGTCAGCAAC...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGACTGCTGCTGGGCTGTaGCTGGGCAGTCTGTACATG +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLTAAGL*LGSLYM
Trigger: CATGTACAGACTGCCCAGCCACAGCCCAGCAGCAGT...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTGGCCCTTAGTGTAGATGGCCTTCTTGGCTaGGTGAATCCCTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RWAKAKLGTAPAGLALSVDGLLG*VNPLDA
Trigger: AGCATCCAAGGGATTCACCCAGCCAAGAAGGCCATC...TACACTAAGGGCCAGCCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGAAAGCTGGTCCAGGCTaGGTGAACGGTAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: WHADKLANCRLERPALLGKAGPG*VNGKGL
Trigger: GAGTCCCTTACCGTTCACTCAGCCTGGACCAGCTTT...CCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGGGCTGGCCTTCTGTGTaGGAAAAGCCATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: WHADKLANCRLERPALLGGWPSV*EKPSLS
Trigger: AGAGAGCGATGGCTTTTCTCACACAGAAGGCCAGCC...CCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCCATGGGCTGGCTCCTTaGACTTTGCGATGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCHGLAP*TLRWLS
Trigger: GGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATG...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR GCA 90 bp ATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCAACTGGGCCTGGGGGCTaGAGGGCTGGTCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: MSTSLNSSLLESPCGWLATGPGG*RAGLTG
Trigger: GCCTGTAAGACCAGCCCTGCAGCCCCCAGGCCCAGT...TGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGCTGTGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTGAGCGGCTGGCTTGGAACTaGCAGCAAGGGCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SCGHTCSWVSHHTQSGPERLAWN*QQGHLN
Trigger: GTTCAAGTGCCCTTGCTGCCAGTTCCAAGCCAGCCG...CTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGAACTGCTGCTGGGCTGTaGCTGGGCAGTCTGTACATG +
Preference number: 4 (lower is better)
Translates to: KLANCRLERPALLGILHRTAAGL*LGSLYM
Trigger: CATGTACAGACTGCCCAGCCACAGCCCAGCAGCAGT...TCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GACCACTGTCCAGTCCTCCCTCCCATGCCTTTTAAGTTCCCTACCAGCTTCCATCCGGAGCCCCTGATGTaGGGTACACTGCATCCGACT +
Preference number: 4 (lower is better)
Translates to: DHCPVLPPMPFKFPTSFHPEPLM*GTLHPT
Trigger: AGTCGGATGCAGTGTACCCCACATCAGGGGCTCCGG...ATGGAAGCTGGTAGGGAACTTAAAAGGCATGGGAGGGAGGACTGGACAGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTTGCCCTGTGAGCTCCTaGAAGACACCACAGCCCTAC +
Preference number: 4 (lower is better)
Translates to: RRQVGKLQTGETCTSGDPCPVSS*KTPQPY
Trigger: GTAGGGCTGTGGTGTCTTCCAGGAGCTCACAGGGCA...AGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACTGAAGGACTTTGTGTaGCAGCTGTCGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: RWAKAKLGTAPAGLALSVLKDFV*QLSQML
Trigger: AAGCATCTGCGACAGCTGCCACACAAAGTCCTTCAG...TACACTAAGGGCCAGCCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTCTTGGAGCTGACATGTaGCCCATCTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: RRQVGKLQTGETCTSGDPLGADM*PISTTS
Trigger: GGAGGTGGTGGAGATGGGCCACATGTCAGCTCCAAG...AGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGAACGGTAAGGGACTCTaGGTAGGAACAGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: WHADKLANCRLERPALLGNGKGL*VGTGWL
Trigger: CAGCCATCCTGTTCCTACTCAGAGTCCCTTACCGTT...CCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGGCTTCTTCCTTAGGTTaGGCTTCAGGACTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGASSLG*ASGLSG
Trigger: GCCACTTAGTCCTGAAGCTCAACCTAAGGAAGAAGC...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCTCATCACTGTACAGCTaGTCCTCCTCTGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCSSLYS*SSSGSS
Trigger: GGATGAGCCAGAGGAGGAGCAGCTGTACAGTGATGA...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ACAAGGCAGAGAGAGGGAAAGTACCTTGTCCCCACCCCTACTCTCTACCTCAGGCCTCGTCCTCGTCCATaGATGATGGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TRQREGKYLVPTPTLYLRPRPRP*MMAFLA
Trigger: AGCCAAGAAGGCCATCATGCATGGACGAGGACGAGG...CCTGAGGTAGAGAGTAGGGGTGGGGACAAGGTACTTTCCCTCTCTCTGCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR GCA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGCCGGCCCATGGGACCTaGCACTCCTCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: AWTSKGCFVESKSHLLESPAHGT*HSSSSS
Trigger: GGACGAGGACGAGGAGTGGCAGGTCCCATGGGCCGG...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCGCGATGGCTTTCCGCTaGTGGGGAAGCATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCAMAFR*WGSICK
Trigger: TTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGC...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR CCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATACGGCAGGCCTCGGCTaGCTTGGAACTGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDTAGLG*LGTGSK
Trigger: CTTGCTGCCAGTTCCAAGCCAGCCGAGGCCTGCCGT...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGCTCTCGAGGGAACACTaGCTGCTGTCCTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLLSREH*LLSLLI
Trigger: AATCAGCAAGGACAGCAGCCAGTGTTCCCTCGAGAG...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGCTGTGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTGAGTGGTTGATGAGGTGGTaGCAACGGAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SCGHTCSWVSHHTQSGPEWLMRW*QRRMQG
Trigger: CCCTTGCATCCTCCGTTGCCACCACCTCATCAACCA...CTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGATGGTTGATGAGGTGGTaGCAACGGAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KLANCRLERPALLGILHRWLMRW*QRRMQG
Trigger: CCCTTGCATCCTCCGTTGCCACCACCTCATCAACCA...TCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CCTGCACCGACCTACAGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGACTGCGGCTGAGACATaGGCATCAGAGGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PAPTYSFLEEIPQCVQHETAAET*ASEEGE
Trigger: CTCCCCCTCCTCTGATGCCCATGTCTCAGCCGCAGT...CTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCTGTAGGTCGGTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCGTAACTCCTTCTTTCTaGCACCAGCCTGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCVTPSF*HQPAVA
Trigger: GGCAACAGCAGGCTGGTGCCAGAAAGAAGGAGTTAC...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTGGCCCTTAGTGTATCAGCTGGACATCAGTaGTGGATGAGGATAGACCTT +
Preference number: 4 (lower is better)
Translates to: RWAKAKLGTAPAGLALSVSAGHQ*WMRIDL
Trigger: AAGGTCTATCCTCATCCACCACTGATGTCCAGCTGA...TACACTAAGGGCCAGCCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGACAGCATCTGTAAACTCTaGATGGGGCCCACGGACATC +
Preference number: 4 (lower is better)
Translates to: SWQTADWRDLHFWGSCTDSICKL*MGPTDI
Trigger: GATGTCCGTGGGCCCCATCCAGAGTTTACAGATGCT...GTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR CCA 90 bp GGCTCGGCAGTAAGGAGCACTAGCTGTTCTTCCAGAGGAGCTGGGTTTAATTCCTCCATTCCTCCCTCGTaGGTCTCAGAAGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: GSAVRSTSCSSRGAGFNSSIPPS*VSEATW
Trigger: CCAGGTTGCTTCTGAGACCCACGAGGGAGGAATGGA...GGAATTAAACCCAGCTCCTCTGGAAGAACAGCTAGTGCTCCTTACTGCCGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGTGCAGCTGCTGTTGCTaGAACAGACTTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLCSCCC*NRLLIG
Trigger: GCCAATCAGAAGTCTGTTCCAGCAACAGCAGCTGCA...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGTTGCTGATTAAAAGCTaGTCCAGGCTGAGTGAACGG +
Preference number: 4 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGLLIKS*SRLSER
Trigger: CCGTTCACTCAGCCTGGACCAGCTTTTAATCAGCAA...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGCTGAAGGACTTTGTGTaGCAGCTGTCGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLLKDFV*QLSQML
Trigger: AAGCATCTGCGACAGCTGCCACACAAAGTCCTTCAG...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGCAGACTCTTCAGCTaGACATCAGTGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCSRLFS*TSVVDE
Trigger: CTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCT...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGATGGCTTTCCGCTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCCCAGCAGCGGAAAGCCAT...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR CAA 72 bp GCCATGGGCACAGGACCTGCACAAGCAGCTACCTATTaGGATTGGGTGGGGACTGCCTCAGAATCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: AMGTGPAQAATY*DWVGTASESLE
Trigger: TTCAAGAGATTCTGAGGCAGTCCCCACCCAATCCAAATAGGTAGCTGCTTGTGCAGGTCCTGTGCCCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 72 bp GGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTaGTGCATTTTGTCTTGGGTCAGAGGACACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GPQLGHKEVLPD*CILSWVRGHRE
Trigger: TTCTCTGTGTCCTCTGACCCAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR TCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGCATCTCCAAAACATGTaGAGGTGCTATGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLHLQNM*RCYGEF
Trigger: GAACTCCCCATAGCACCTTCACATGTTTTGGAGATG...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGCTGTGGAATTTCTGTTaGAACGCTAGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLLWNFC*NASAWA
Trigger: AGCCCATGCACTAGCGTTTCAACAGAAATTCCACAG...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR GCA 90 bp ATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCATGCTGCTGCTGCTGCTaGTGCGCAAGCCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: MSTSLNSSLLESPCGWLACCCCC*CASLSS
Trigger: ACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGCAGCA...TGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CCAGCAACACAGCCTGCACTCCAAGCTGCCTGCACAGCAGGGAGGTGCACAAACACCACTCGAAGGTTCTaGTTATTTGGCATTAGTCGT +
Preference number: 4 (lower is better)
Translates to: PATQPALQAACTAGRCTNTTRRF*LFGISR
Trigger: ACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGT...GTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGACGGCAGGCCTCGGCTaGCTTGGAACTGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AWTSKGCFVESKSHLLESTAGLG*LGTGSK
Trigger: CTTGCTGCCAGTTCCAAGCCAGCCGAGGCCTGCCGT...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGTGCTGTGGAAATTCTaGAGGGCCTGGAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLVLWKF*RAWKSL
Trigger: CAAAGATTTCCAGGCCCTCCAGAATTTCCACAGCAC...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGACACAGCCCTACAAGGTaGGGATGTGTTGACAATGGA +
Preference number: 4 (lower is better)
Translates to: KLANCRLERPALLGILHRHSPTR*GCVDNG
Trigger: TCCATTGTCAACACATCCCCACCTTGTAGGGCTGTG...TCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCTCGCAGATGCTTCAATaGTCTCAAGTGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCSQMLQ*SQVLPL
Trigger: CAAGGGCAACACTTGAGACCATTGAAGCATCTGCGA...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GGACAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGGCGGCCTGTGGGGAGTaGGGGGTCTCCTCCATATCC +
Preference number: 4 (lower is better)
Translates to: GQQNSKQSNTRLQSHVHQAACGE*GVSSIS
Trigger: GGATATGGAGGAGACCCCCCACTCCCCACAGGCCGC...CTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAAGGCAGAGAGAGGGAAAGTACCTTGTCCCCACCCCTACTCTCTACCTCAGGAGCAGACTCTTCAGCTaGACATCAGTGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: TRQREGKYLVPTPTLYLRSRLFS*TSVVDE
Trigger: CTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCT...CCTGAGGTAGAGAGTAGGGGTGGGGACAAGGTACTTTCCCTCTCTCTGCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
3UTR CAA 72 bp CTCGGGCACAAGGAAGTGCTTCCTGACTTGTGCATTTaGTCTTGGGTCAGAGGACACAGAGAAGACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGHKEVLPDLCI*SWVRGHREDPQ
Trigger: CTGAGGGTCTTCTCTGTGTCCTCTGACCCAAGACAAAATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR TCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCATGTGGTGGGGAGGGGTaGTGCGGATGCTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESCGGEG*CGCCKG
Trigger: CCCCTTACAGCATCCGCATCACCCCTCCCCACCACA...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATGGCTGCTGTCCTTGCTaGTTAAAAGCTGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDGCCPC*LKAGPG
Trigger: GCCTGGACCAGCTTTTAATCAGCAAGGACAGCAGCC...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGACCGGCCCATGGGACCTaGCACTCCTCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRPAHGT*HSSSSS
Trigger: GGACGAGGACGAGGAGTGGCAGGTCCCATGGGCCGG...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp ACAAGGCAGAGAGAGGGAAAGTACCTTGTCCCCACCCCTACTCTCTACCTCAGGCTCCGGATTGGTCATTaGTGTTGTCAGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TRQREGKYLVPTPTLYLRLRIGH*CCQTAQ
Trigger: TTGAGCTGTCTGACAACACCAATGACCAATCCGGAG...CCTGAGGTAGAGAGTAGGGGTGGGGACAAGGTACTTTCCCTCTCTCTGCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCAGTGCACTCCCTGTGGTaGGGAGGGGTGATGCGGATG +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESVHSLW*GGVMRM
Trigger: CATCCGCATCACCCCTCCCCACCACAGGGAGTGCAC...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCGGTGGGGCTCTCCACTaGTCCTGGAGAGGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: SNPMSTSLNSSLLESPCGGGALH*SWRGSL
Trigger: TAGACTTCCTCTCCAGGACCAGTGGAGAGCCCCACC...GCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATGGGAGGAGGCGGCGGTaGAGGAGGACTTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: IYLSWAASALLRNPSFTNGRRRR*RRTSLF
Trigger: GAACAGCGAAGTCCTCCTCCACCGCCGCCTCCTCCC...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGAACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGTGCAGGATCCCCACTaGGCCTGGGGGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RTRSTCIISTRKQKNTRTVQDPH*AWGLQG
Trigger: GCCCTGCAGCCCCCAGGCCCAGTGGGGATCCTGCAC...TGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGCGGCCTGTGGGGAGTaGGGGGTCTCCTCCATATCC +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIAACGE*GVSSIS
Trigger: GGATATGGAGGAGACCCCCCACTCCCCACAGGCCGC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp CCTGCACCGACCTACAGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGAGCATCTGTAAACTCTaGATGGGGCCCACGGACATC +
Preference number: 4 (lower is better)
Translates to: PAPTYSFLEEIPQCVQHESICKL*MGPTDI
Trigger: GATGTCCGTGGGCCCCATCCAGAGTTTACAGATGCT...CTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCTGTAGGTCGGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp AGCTGTGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTGAGGTCAGACAGCTCAAATaGTGTAACTATGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SCGHTCSWVSHHTQSGPEVRQLK*CNYARG
Trigger: ACCTCTGGCATAGTTACATCATTTGAGCTGTCTGAC...CTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp GTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGGCGGCTGGTGCTGGTaGTGCTGGGGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VYMHYKHSETKEHENRVLGGWCW*CWGCCW
Trigger: CCAACAGCAGCCCCAGCATCACCAGCACCAGCCGCC...AAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGGGCGGCTGGTGCTGGTaGTGCTGGGGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: STCIISTRKQKNTRTEFLGGWCW*CWGCCW
Trigger: CCAACAGCAGCCCCAGCATCACCAGCACCAGCCGCC...CAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGCCGACTGGTTCTTTTTaGCAGACAGTAAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLPTGSF*QTVNLL
Trigger: GAGAAGATTTACTGTCTGGCAAAAAGAACCAGTCGG...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCTGCAGCTTTGGCTTCTaGAGAAAGTTCCAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LFWNHPVAGWHADKLANCCSFGF*RKFQSF
Trigger: GAAACTTTGGAACTTTCTGCAGAAGCCAAAGCTGCA...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATCTGGGAGCAGTGGGTTaGATCTGCTGCATGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNLGAVG*ICCMGR
Trigger: ACGGCCCATGCAGCAGATGCAACCCACTGCTCCCAG...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR GCA 90 bp TGGTGTCTCGTGGTTTCTAAGCAGCCAGCGCACTCCCAGCAACACAGCCTGCACTTCATCAGGAAACTCTaGTTCTGGTTTTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WCLVVSKQPAHSQQHSLHFIRKL*FWFCFF
Trigger: GAAGAAGCAAAACCAGAAGCAGAGTTTCCTGATGAA...GTGCAGGCTGTGTTGCTGGGAGTGCGCTGGCTGCTTAGAAACCACGAGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp TGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCAGACTGATACTGTCCTTCCTCTaGGTACTCTTGAGTATACAG +
Preference number: 4 (lower is better)
Translates to: WNHPVAGWHADKLANCRLILSFL*VLLSIQ
Trigger: CTGTATACTCAAGAGTACCCAGAGGAAGGACAGTAT...CAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGCTGGCCCTTAGTGTATCTTTTATGTCTTTCTaGAGTTCCAGGGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: RWAKAKLGTAPAGLALSVSFMSF*SSRVSI
Trigger: AATGGAAACCCTGGAACTCCAGAAAGACATAAAAGA...TACACTAAGGGCCAGCCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTAGCATCCGACTGCTGCTaGGCTGTGGCTGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVASDCC*AVAGQS
Trigger: AGACTGCCCAGCCACAGCCCAGCAGCAGTCGGATGC...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATGAAGGGATGTCACTCTaGCGGCCTGTGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHEGMSL*RPVGSG
Trigger: CCCACTCCCCACAGGCCGCCAGAGTGACATCCCTTC...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
3UTR CAA 72 bp AGGCTAGGGCACCATCTTCCTCACCAAGCTTTCTATTaGTCCATCATCTGGGAATGTACAAGCCCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RLGHHLPHQAFY*SIIWECTSPVG
Trigger: CCCGACAGGGCTTGTACATTCCCAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATGGTGCCCTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR TCA 90 bp ACTCAAGTGAGTATCAGTGGCCACTGCAGACGTGGAAGCCACAGAAATGGAGGGTCCTCTGGGTACTCTTaGGTATACAGTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TQVSISGHCRRGSHRNGGSSGYS*VYSSCS
Trigger: GGAACAAGAACTGTATACTCAAGAGTACCCAGAGGA...CCCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR TCA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGCATCTAAAGGTTCATTaGTTTCGATGTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LARRQVGKLQTGETCTSGHLKVH*FRCPAL
Trigger: AAGTGCTGGACATCGAAATCAATGAACCTTTAGATG...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGGCTGGAACAGACTTCTaGTTGGCTGCTGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AWTSKGCFVESKSHLLESAGTDF*LAAAEV
Trigger: CACCTCAGCAGCAGCCAATCAGAAGTCTGTTCCAGC...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGATGTGGTGGGGAGGGGTaGTGCGGATGCTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRCGGEG*CGCCKG
Trigger: CCCCTTACAGCATCCGCATCACCCCTCCCCACCACA...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATGGCCTGAACTGCGGCTaGGACATGGGCATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: IYLSWAASALLRNPSFTNGLNCG*DMGIRG
Trigger: TCCTCTGATGCCCATGTCTCAGCCGCAGTTCAGGCC...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATAAGGTGGGGATGTGTTaGCAATGGACTTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDKVGMC*QWTSPE
Trigger: CTCAGGTGAAGTCCATTGTCAACACATCCCCACCTT...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGGCAAGTAGAACAATCCAGAACAGCCATGCTCACATCCTCAGAGAGATACAATCAGTCTTCCCGCACTTaGAGCCCTTGTTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RQVEQSRTAMLTSSERYNQSSRT*SPCCPP
Trigger: TGGTGGGCAACAAGGGCTGCAAGTGCGGGAAGACTG...ATTGTATCTCTCTGAGGATGTGAGCATGGCTGTTCTGGATTGTTCTACTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR GCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACAGTCTTCCCGCACTTaGAGCCCTTGTTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESQSSRT*SPCCPP
Trigger: TGGTGGGCAACAAGGGCTGCAAGTGCGGGAAGACTG...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR GCA 90 bp TCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGACTGGGCCTGGGGGCTaGAGGGCTGGTCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: STCIISTRKQKNTRTEFLTGPGG*RAGLTG
Trigger: GCCTGTAAGACCAGCCCTGCAGCCCCCAGGCCCAGT...CAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATCTGGGAGCAGTGGGTTaGATCTGCTGCATGGGCCGT +
Preference number: 4 (lower is better)
Translates to: IYLSWAASALLRNPSFTNLGAVG*ICCMGR
Trigger: ACGGCCCATGCAGCAGATGCAACCCACTGCTCCCAG...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTGTGCACTCCCTGTGGTaGGGAGGGGTGATGCGGATG +
Preference number: 4 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFVHSLW*GGVMRM
Trigger: CATCCGCATCACCCCTCCCCACCACAGGGAGTGCAC...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAAGGCCTCGGCTGGCTTaGAACTGGCAGCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRRPRLA*NWQQGH
Trigger: GTGCCCTTGCTGCCAGTTCCAAGCCAGCCGAGGCCT...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCCTGAGGTGGGGGTaGGGCTCTCCACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEFLRWG*GSPLVL
Trigger: CAGGACCAGTGGAGAGCCCCACCCCCACCTCAGGAA...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAGTCTCGTTCCTGAGGTaGGGGTGGGGCTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSVSFLR*GWGSPL
Trigger: CAGTGGAGAGCCCCACCCCCACCTCAGGAACGAGAC...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTCTGCTGGGCTGTGGCTaGGCAGTCTGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFLLGCG*AVCTCG
Trigger: GCCGCATGTACAGACTGCCCAGCCACAGCCCAGCAG...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACTGCTGGGCTGTGGCTaGGCAGTCTGTACATGCGGC +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSLLGCG*AVCTCG
Trigger: GCCGCATGTACAGACTGCCCAGCCACAGCCCAGCAG...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTACCGGAGCCCCTGATGTaGGGTACACTGCATCCGACT +
Preference number: 4 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVPEPLM*GTLHPT
Trigger: AGTCGGATGCAGTGTACCCCACATCAGGGGCTCCGG...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCATGCCCTGTGAGCTCCTaGAAGACACCACAGCCCTAC +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESCPVSS*KTPQPY
Trigger: GTAGGGCTGTGGTGTCTTCCAGGAGCTCACAGGGCA...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TCCATCTACATCACAACTATTCTTCACATATATAGCCTGCAAGAGTTCCCACGTGAAGGGATGTCACTCTaGCGGCCTGTGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SIYITTILHIYSLQEFPREGMSL*RPVGSG
Trigger: CCCACTCCCCACAGGCCGCCAGAGTGACATCCCTTC...ACGTGGGAACTCTTGCAGGCTATATATGTGAAGAATAGTTGTGATGTAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAGCTGAGGAACCCCCTTaGTCAGCGTCACCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRAEEPP*SASPCG
Trigger: CCCGCAAGGTGACGCTGACCAAGGGGGTTCCTCAGC...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
3UTR CAA 72 bp AGCAAGGTCAGAGTGAGCCGTTGTTCTAAGCAGTGCTaGGAGCTGGTCTGTCTCACAGGACACTACAATAAG +
Preference number: 4 (lower is better)
Translates to: SKVRVSRCSKQC*ELVCLTGHYNK
Trigger: CTTATTGTAGTGTCCTGTGAGACAGACCAGCTCCAAGCACTGCTTAGAACAACGGCTCACTCTGACCTTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CAA 72 bp TCTGTGGTTTCCTTCACAGAAGCCTTTAGGACTGGCTaGCCTGGTCTGATAGTCCACCCCAAATGGATGTGT +
Preference number: 4 (lower is better)
Translates to: SVVSFTEAFRTG*PGLIVHPKWMC
Trigger: ACACATCCATTTGGGGTGGACTATCAGACCAGGCAAGCCAGTCCTAAAGGCTTCTGTGAAGGAAACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCAGGATGCAAGGGTCCCTaGAGGTTAGGCTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESGCKGP*RLGCAC
Trigger: ACATGCACAGCCTAACCTTCAGGGACCCTTGCATCC...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCGCCTTCTTGGCTGGGTaGATCCCTTGGATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SNPMSTSLNSSLLESPCGAFLAG*IPWMLL
Trigger: TAAAAGCATCCAAGGGATTCACCCAGCCAAGAAGGC...GCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp TCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCAGTAGAGGCTGCAGCTaGTGTTGCTGGAACAGACTT +
Preference number: 4 (lower is better)
Translates to: SNPMSTSLNSSLLESPCGSRGCS*CCWNRL
Trigger: AAGTCTGTTCCAGCAACAGCAGCTGCAGCCTCTACT...GCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCAGCTGCATGGGCCGTTTaGTTATATTCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: MSTSLNSSLLESPCGWLAAAWAV*LYSEML
Trigger: CAGCATCTCAGAATATAAGCAAACGGCCCATGCAGC...TGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTTCTAAGACATCCTATGAATGCCTCAGCTCAACTGCCTGGATACCAAACAACAGCAGTGGGTTGCATCTaGTGCATGGGCCGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLRHPMNASAQLPGYQTTAVGCI*CMGRLL
Trigger: AAGCAAACGGCCCATGCAGCAGATGCAACCCACTGC...TGTTGTTTGGTATCCAGGCAGTTGAGCTGAGGCATTCATAGGATGTCTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGCTGCTGCTGCTGCTaGTGCGCAAGCCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHCCCCC*CASLSS
Trigger: ACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGCAGCA...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp ATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACACATGTGCACTCCCTGTaGTGGGGAGGGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: IISTRKQKNTRTEFLWTTHVHSL*WGGVMR
Trigger: CCGCATCACCCCTCCCCACCACAGGGAGTGCACATG...TGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CAATCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGCGGCTGGCTTGGAACTaGCAGCAAGGGCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: QSHSRITKNKVYMHYKHSRLAWN*QQGHLN
Trigger: GTTCAAGTGCCCTTGCTGCCAGTTCCAAGCCAGCCG...CGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GAGAAGACCCTCAGAGCACCCTATAATAAGCAAAAGCACTACTTAACTACTGCAGTTGCTGACCCTGGCTaGCTAAAGTGCAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: EKTLRAPYNKQKHYLTTAVADPG*LKCRIP
Trigger: GGGGATCCTGCACTTTAGCCAGCCAGGGTCAGCAAC...TGCAGTAGTTAAGTAGTGCTTTTGCTTATTATAGGGTGCTCTGAGGGTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATCTTGGAGCTGACATGTaGCCCATCTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHLGADM*PISTTS
Trigger: GGAGGTGGTGGAGATGGGCCACATGTCAGCTCCAAG...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
3UTR CAA 72 bp GTTCTTGTCTACCCTGCGCCCCATTCGTTATCTCCTTaGCAGAGCACATCAAGGTACAATTCCTTAGACCTG +
Preference number: 4 (lower is better)
Translates to: VLVYPAPHSLSP*QSTSRYNSLDL
Trigger: CAGGTCTAAGGAATTGTACCTTGATGTGCTCTGCAAAGGAGATAACGAATGGGGCGCAGGGTAGACAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR TCA 90 bp ATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACACTGATTGGCTGCTGCTaGGGTGGTGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: IISTRKQKNTRTEFLWTTLIGCC*GGGGGG
Trigger: ACCACCACCACCACCACCTCAGCAGCAGCCAATCAG...TGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTTCTGTACATGCGGCCTaGACTGCGGCTGAGACATGG +
Preference number: 4 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFSVHAA*TAAETW
Trigger: CCATGTCTCAGCCGCAGTTCAGGCCGCATGTACAGA...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTTTATGCCGGAGCCCCTaGTGTGGGGTACACTGCATC +
Preference number: 4 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFLCRSP*CGVHCI
Trigger: GATGCAGTGTACCCCACATCAGGGGCTCCGGCATAA...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCGGCTGGCCTTCTGTGTaGGAAAAGCCATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVGWPSV*EKPSLS
Trigger: AGAGAGCGATGGCTTTTCTCACACAGAAGGCCAGCC...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATGGCTGGCCTTCTGTGTaGGAAAAGCCATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHGWPSV*EKPSLS
Trigger: AGAGAGCGATGGCTTTTCTCACACAGAAGGCCAGCC...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAATGCTGCTGCTGCTGCTaGTGCGCAAGCCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQCCCCC*CASLSS
Trigger: ACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGCAGCA...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATCCTCGTCCTCGTCCATaGATGATGGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHPRPRP*MMAFLA
Trigger: AGCCAAGAAGGCCATCATGCATGGACGAGGACGAGG...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGGTCTCGTTCCTGAGGTaGGGGTGGGGCTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMVSFLR*GWGSPL
Trigger: CAGTGGAGAGCCCCACCCCCACCTCAGGAACGAGAC...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCGGGAGGAGGCGGCGGTaGAGGAGGACTTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KQKNTRTEFLWTTEFKTIGRRRR*RRTSLF
Trigger: GAACAGCGAAGTCCTCCTCCACCGCCGCCTCCTCCC...GATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATGATGCTTTTAATCCCTaGAGGAATAGCCGGGTACAT +
Preference number: 4 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDDAFNP*RNSRVH
Trigger: ATGTACCCGGCTATTCCTCCAGGGATTAAAAGCATC...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTCAGCTGGACATCAGTaGTGGATGAGGATAGACCTT +
Preference number: 4 (lower is better)
Translates to: SNPMSTSLNSSLLESPCGSAGHQ*WMRIDL
Trigger: AAGGTCTATCCTCATCCACCACTGATGTCCAGCTGA...GCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR TCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAGCTGGAACAGACTTCTaGTTGGCTGCTGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRAGTDF*LAAAEV
Trigger: CACCTCAGCAGCAGCCAATCAGAAGTCTGTTCCAGC...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGGATGCAAGGGTCCCTaGAGGTTAGGCTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQGCKGP*RLGCAC
Trigger: ACATGCACAGCCTAACCTTCAGGGACCCTTGCATCC...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp GGACAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGAAGGTGGGGATGTGTTaGCAATGGACTTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: GQQNSKQSNTRLQSHVHQKVGMC*QWTSPE
Trigger: CTCAGGTGAAGTCCATTGTCAACACATCCCCACCTT...CTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTCATGGGCTGGCTCCTTaGACTTTGCGATGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFHGLAP*TLRWLS
Trigger: GGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATG...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR TCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGCATGGGCTGGCTCCTTaGACTTTGCGATGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEHGLAP*TLRWLS
Trigger: GGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATG...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR TCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAACATGGGCTGGCTCCTTaGACTTTGCGATGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQHGLAP*TLRWLS
Trigger: GGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATG...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTATCTCCAGGACCGTTCTaGACCAGGCTTGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVSPGPF*TRLVKL
Trigger: CAGTTTGACAAGCCTGGTGCAGAACGGTCCTGGAGA...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp TCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCGTCTTCTGTCAACTCTaGATCATGGCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: SNPMSTSLNSSLLESPCGVFCQL*IMAFIL
Trigger: CAGTATGAAGGCCATGATGCAGAGTTGACAGAAGAC...GCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AATCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGTCATCACTGTACAGCTaGTCCTCCTCTGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: NHIAGSRRTRSTCIISTRSSLYS*SSSGSS
Trigger: GGATGAGCCAGAGGAGGAGCAGCTGTACAGTGATGA...CCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATTTCAAATTCCAGCAATaGAGCTTTGGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDFKFQQ*SFGFCR
Trigger: TCTGCAGAAGCCAAAGCTGCATTGCTGGAATTTGAA...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGCCTGGCTGGCTAAAGTaGAGGATCCCCACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMPGWLK*RIPTGP
Trigger: AGGCCCAGTGGGGATCCTGCACTTTAGCCAGCCAGG...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATCTGGTTTTCACATTCTaGCTGCATTGTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNLVFTF*LHCAPG
Trigger: TCCAGGGGCACAATGCAGGCAGAATGTGAAAACCAG...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR GCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGCCTCGTCCTCGTCCATaGATGATGGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEPRPRP*MMAFLA
Trigger: AGCCAAGAAGGCCATCATGCATGGACGAGGACGAGG...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATACCACTCGAAGGTTCTaGTTATTTGGCATTAGTCGT +
Preference number: 4 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDTTRRF*LFGISR
Trigger: ACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGT...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTATGGCTCCTTGAACTTTaGGATGGCTTTCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVWLLEL*DGFPLL
Trigger: CAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCA...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTATGGCTCCTTGAACTTTaGGATGGCTTTCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVWLLEL*DGFPLL
Trigger: CAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCA...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CAATCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGAACAGACTTCTGATTaGCTGCTGCTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QSHSRITKNKVYMHYKHSEQTSD*LLLRWW
Trigger: CCACCACCTCAGCAGCAGCCAATCAGAAGTCTGTTC...CGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTGGGCCTGGAAATCTTTaGGGTCCCACGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NKRTREQSSCGQQNSKQSGPGNL*GPTAGL
Trigger: GAGGCCTGCCGTGGGACCCCAAAGATTTCCAGGCCC...AGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGAACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGGTGGGGCTCTCCACTaGTCCTGGAGAGGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: RTRSTCIISTRKQKNTRTGGALH*SWRGSL
Trigger: TAGACTTCCTCTCCAGGACCAGTGGAGAGCCCCACC...TGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGTAACTCCTTCTTTCTaGCACCAGCCTGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIVTPSF*HQPAVA
Trigger: GGCAACAGCAGGCTGGTGCCAGAAAGAAGGAGTTAC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp TCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGAACCTGCATTGTGCCCCTaGAAAGGGCAACAATGGGTT +
Preference number: 4 (lower is better)
Translates to: SHSRITKNKVYMHYKHSEPALCP*KGQQWV
Trigger: AACCCATTGTTGCCCTTTCCAGGGGCACAATGCAGG...TTCCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCGCTGAGGAACCCCCTTaGTCAGCGTCACCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: KQKNTRTEFLWTTEFKTIAEEPP*SASPCG
Trigger: CCCGCAAGGTGACGCTGACCAAGGGGGTTCCTCAGC...GATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTAGATGGCCTTCTTGGCTaGGTGAATCCCTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVDGLLG*VNPLDA
Trigger: AGCATCCAAGGGATTCACCCAGCCAAGAAGGCCATC...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGATGGCCTTCTTGGCTaGGTGAATCCCTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIDGLLG*VNPLDA
Trigger: AGCATCCAAGGGATTCACCCAGCCAAGAAGGCCATC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp CAATCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGAGCATCTGTAAACTCTaGATGGGGCCCACGGACATC +
Preference number: 4 (lower is better)
Translates to: QSHSRITKNKVYMHYKHSSICKL*MGPTDI
Trigger: GATGTCCGTGGGCCCCATCCAGAGTTTACAGATGCT...CGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR CCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATAGCATCTGTAAACTCTaGATGGGGCCCACGGACATC +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHSICKL*MGPTDI
Trigger: GATGTCCGTGGGCCCCATCCAGAGTTTACAGATGCT...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp GGACAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGATGGCTTTCCGCTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: GQQNSKQSNTRLQSHVHQMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCCCAGCAGCGGAAAGCCAT...CTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
3UTR CAA 72 bp AAACCAATGACAGCACGAACTACAGAGCTAGGACATTaGAAAAGCAAAGAAGCCCAAGCAGGTCTGACCACC +
Preference number: 4 (lower is better)
Translates to: KPMTARTTELGH*KSKEAQAGLTT
Trigger: GGTGGTCAGACCTGCTTGGGCTTCTTTGCTTTTCAAATGTCCTAGCTCTGTAGTTCGTGCTGTCATTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp AGCTTCTTCCTCCTCCCAGATGTTTGTAACCTGAGACTGCTCTCTTATACAGACGTCAGACAGCTCAAATaGTGTAACTATGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SFFLLPDVCNLRLLSYTDVRQLK*CNYARG
Trigger: ACCTCTGGCATAGTTACATCATTTGAGCTGTCTGAC...GTCTGTATAAGAGAGCAGTCTCAGGTTACAAACATCTGGGAGGAGGAAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR TCA 90 bp TTGTTTGGCAAAATGTTGAGCATAGCACAACTGGGCACCAGCCTCACTTATACCTCCTCTGGGTACTCTTaGGTATACAGTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFGKMLSIAQLGTSLTYTSSGYS*VYSSCS
Trigger: GGAACAAGAACTGTATACTCAAGAGTACCCAGAGGA...GGTATAAGTGAGGCTGGTGCCCAGTTGTGCTATGCTCAACATTTTGCCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR TCA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATGCTTCTTCCTTAGGTTaGGCTTCAGGACTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: IYLSWAASALLRNPSFTNASSLG*ASGLSG
Trigger: GCCACTTAGTCCTGAAGCTCAACCTAAGGAAGAAGC...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCCCTGGCTGGCTAAAGTaGAGGATCCCCACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KQKNTRTEFLWTTEFKTIPGWLK*RIPTGP
Trigger: AGGCCCAGTGGGGATCCTGCACTTTAGCCAGCCAGG...GATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp GTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGCAGTGGGTTGCATCTaGTGCATGGGCCGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VYMHYKHSETKEHENRVLAVGCI*CMGRLL
Trigger: AAGCAAACGGCCCATGCAGCAGATGCAACCCACTGC...AAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTATTCTGCCTGCATTGTaGCCCTGGAAAGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIILPAL*PWKGQQ
Trigger: TTGTTGCCCTTTCCAGGGGCACAATGCAGGCAGAAT...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTCGCTCTCTCCTCCCTaGCCTCCAGACAACTTAATC +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTESLSPP*PPDNLI
Trigger: GATTAAGTTGTCTGGAGGGCAGGGAGGAGAGAGCGA...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAGCGATGGCTTTCCGCTaGTGGGGAAGCATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRAMAFR*WGSICK
Trigger: TTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGC...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCATGGCTCCTTGAACTTTaGGATGGCTTTCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSWLLEL*DGFPLL
Trigger: CAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCA...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACTCCGGATTGGTCATTaGTGTTGTCAGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESLRIGH*CCQTAQ
Trigger: TTGAGCTGTCTGACAACACCAATGACCAATCCGGAG...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAGAACAGACTTCTGATTaGCTGCTGCTGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSREQTSD*LLLRWW
Trigger: CCACCACCTCAGCAGCAGCCAATCAGAAGTCTGTTC...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGGCTCTCCACTGGTCCTaGAGAGGAAGTCTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMALHWS*RGSLGG
Trigger: GCCACCTAGACTTCCTCTCCAGGACCAGTGGAGAGC...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGAAGGAGATTACTGTTCCTaGGAGCAGTGGGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: SHSRITKNKVYMHYKHSEGDYCS*EQWVAS
Trigger: AGATGCAACCCACTGCTCCCAGGAACAGTAATCTCC...TTCCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGAACACAGCCCTACAAGGTaGGGATGTGTTGACAATGGA +
Preference number: 4 (lower is better)
Translates to: SHSRITKNKVYMHYKHSEHSPTR*GCVDNG
Trigger: TCCATTGTCAACACATCCCCACCTTGTAGGGCTGTG...TTCCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAGTAACTCCTTCTTTCTaGCACCAGCCTGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRVTPSF*HQPAVA
Trigger: GGCAACAGCAGGCTGGTGCCAGAAAGAAGGAGTTAC...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACCTGCATTGTGCCCCTaGAAAGGGCAACAATGGGTT +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSPALCP*KGQQWV
Trigger: AACCCATTGTTGCCCTTTCCAGGGGCACAATGCAGG...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAACCTGCATTGTGCCCCTaGAAAGGGCAACAATGGGTT +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQPALCP*KGQQWV
Trigger: AACCCATTGTTGCCCTTTCCAGGGGCACAATGCAGG...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp ATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCAGCAGTGGTGATGTCTTaGTTTTTAACAAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: MSTSLNSSLLESPCGWLAAVVMS*FLTRSL
Trigger: CAGACTTCTTGTTAAAAACCAAGACATCACCACTGC...TGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAAGAAGAGCTCTTTCGGTGCAAGTACCTGTCTTTTCAGCCCATTCTACCAACATCGCAGATGCTTCAATaGTCTCAAGTGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KEELFRCKYLSFQPILPTSQMLQ*SQVLPL
Trigger: CAAGGGCAACACTTGAGACCATTGAAGCATCTGCGA...TGTTGGTAGAATGGGCTGAAAAGACAGGTACTTGCACCGAAAGAGCTCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAACTTGGAGCTGACATGTaGCCCATCTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQLGADM*PISTTS
Trigger: GGAGGTGGTGGAGATGGGCCACATGTCAGCTCCAAG...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTAAGCAGACTCTTCAGCTaGACATCAGTGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVSRLFS*TSVVDE
Trigger: CTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCT...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCATGGCTTTCCGCTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCCCAGCAGCGGAAAGCCAT...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR TCA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGATTCAGCTCTTCATCTaGCAAATCCGACTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: AWTSKGCFVESKSHLLESIQLFI*QIRLVL
Trigger: AAGAACCAGTCGGATTTGTCAGATGAAGAGCTGAAT...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp ACACCAGACTCCAATCCCATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCATCCTCTGGGTACTCTTaGGTATACAGTTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TPDSNPMSTSLNSSLLESSSGYS*VYSSCS
Trigger: GGAACAAGAACTGTATACTCAAGAGTACCCAGAGGA...TGATTCCAGAAGAGAGCTATTTAAACTGGTGGACATGGGATTGGAGTCTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTAAAAACGGTAAGGGACTCTaGGTAGGAACAGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: QNSKQSNTRLQSHVHQFKNGKGL*VGTGWL
Trigger: CAGCCATCCTGTTCCTACTCAGAGTCCCTTACCGTT...TTTAAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGAAAGCTGGTCCAGGCTaGGTGAACGGTAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMKAGPG*VNGKGL
Trigger: GAGTCCCTTACCGTTCACTCAGCCTGGACCAGCTTT...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp GAGAAGACCCTCAGAGCACCCTATAATAAGCAAAAGCACTACTTAACTACTGCACATCTCCAAAACATGTaGAGGTGCTATGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: EKTLRAPYNKQKHYLTTAHLQNM*RCYGEF
Trigger: GAACTCCCCATAGCACCTTCACATGTTTTGGAGATG...TGCAGTAGTTAAGTAGTGCTTTTGCTTATTATAGGGTGCTCTGAGGGTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR TCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGCCTTCTTGGCTGGGTaGATCCCTTGGATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQAFLAG*IPWMLL
Trigger: TAAAAGCATCCAAGGGATTCACCCAGCCAAGAAGGC...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp CTTTACAATCCAATAAACTTCATCTTGGGAATGGGCACACAAAAACAAGCCTACTCTCCAGGACCGTTCTaGACCAGGCTTGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: LYNPINFILGMGTQKQAYSPGPF*TRLVKL
Trigger: CAGTTTGACAAGCCTGGTGCAGAACGGTCCTGGAGA...GTAGGCTTGTTTTTGTGTGCCCATTCCCAAGATGAAGTTTATTGGATTGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR GCA 90 bp AGAACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACATCTCCAGGACCGTTCTaGACCAGGCTTGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: RTRSTCIISTRKQKNTRTSPGPF*TRLVKL
Trigger: CAGTTTGACAAGCCTGGTGCAGAACGGTCCTGGAGA...TGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTTTACAATCCAATAAACTTCATCTTGGGAATGGGCACACAAAAACAAGCCTACTCATCACTGTACAGCTaGTCCTCCTCTGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LYNPINFILGMGTQKQAYSSLYS*SSSGSS
Trigger: GGATGAGCCAGAGGAGGAGCAGCTGTACAGTGATGA...GTAGGCTTGTTTTTGTGTGCCCATTCCCAAGATGAAGTTTATTGGATTGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR GCA 90 bp TCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGACAGGTCCAGGTGTGTaGTGTGGAAATTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: STCIISTRKQKNTRTEFLTGPGV*CGNSGG
Trigger: CCCTCCAGAATTTCCACAGCACACACCTGGACCTGT...CAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAACTGAAGGTTAGGCTGTaGATGTGTAGGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQLKVRL*MCRQEW
Trigger: CCATTCCTGCCTACACATGCACAGCCTAACCTTCAG...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCTCTCAGGCGCTTCTaGTCCTCTATCTTTAAGCGA +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHSLRRF*SSIFKR
Trigger: TCGCTTAAAGATAGAGGAGCAGAAGCGCCTGAGAGA...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTTTTCACATTCTGCCTaGATTGTGCCCCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHFSHSA*IVPLER
Trigger: CCTTTCCAGGGGCACAATGCAGGCAGAATGTGAAAA...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACTGGTTTTCACATTCTaGCTGCATTGTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSLVFTF*LHCAPG
Trigger: TCCAGGGGCACAATGCAGGCAGAATGTGAAAACCAG...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp TTGTTTGGCAAAATGTTGAGCATAGCACAACTGGGCACCAGCCTCACTTATACCTCTGACAAATCCGACTaGTTCTTTTTGCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: LFGKMLSIAQLGTSLTYTSDKSD*FFLPDS
Trigger: ACTGTCTGGCAAAAAGAACCAGTCGGATTTGTCAGA...GGTATAAGTGAGGCTGGTGCCCAGTTGTGCTATGCTCAACATTTTGCCAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp TCAAAGGCTAGGGCACCATCTTCCTCACCAAGCTTTCTATTTGTCCATCATCTGATACTGTCCTTCCTCTaGGTACTCTTGAGTATACAG +
Preference number: 4 (lower is better)
Translates to: SKARAPSSSPSFLFVHHLILSFL*VLLSIQ
Trigger: CTGTATACTCAAGAGTACCCAGAGGAAGGACAGTAT...CAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATGGTGCCCTAGCCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp AGCTTCTTCCTCCTCCCAGATGTTTGTAACCTGAGACTGCTCTCTTATACAGACGTCTCAGAAGCAACCTaGGAATCAGTAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: SFFLLPDVCNLRLLSYTDVSEAT*ESVISS
Trigger: AGATGAGATTACTGATTCCCAGGTTGCTTCTGAGAC...GTCTGTATAAGAGAGCAGTCTCAGGTTACAAACATCTGGGAGGAGGAAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGATGCAGCTGCTGTTGCTaGAACAGACTTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRCSCCC*NRLLIG
Trigger: GCCAATCAGAAGTCTGTTCCAGCAACAGCAGCTGCA...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCGTGCTGTGGAAATTCTaGAGGGCCTGGAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVVLWKF*RAWKSL
Trigger: CAAAGATTTCCAGGCCCTCCAGAATTTCCACAGCAC...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTAGCTCTCCACTGGTCCTaGAGAGGAAGTCTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TKEHENRVLVDNRIQNNLALHWS*RGSLGG
Trigger: GCCACCTAGACTTCCTCTCCAGGACCAGTGGAGAGC...TAGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGGGAGATTACTGTTCCTaGGAGCAGTGGGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEGDYCS*EQWVAS
Trigger: AGATGCAACCCACTGCTCCCAGGAACAGTAATCTCC...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACTGAAGGACTTTGTGTaGCAGCTGTCGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSLKDFV*QLSQML
Trigger: AAGCATCTGCGACAGCTGCCACACAAAGTCCTTCAG...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTTCAGCTGGACATCAGTaGTGGATGAGGATAGACCTT +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISISAGHQ*WMRIDL
Trigger: AAGGTCTATCCTCATCCACCACTGATGTCCAGCTGA...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAAGCAGACTCTTCAGCTaGACATCAGTGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQSRLFS*TSVVDE
Trigger: CTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCT...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAATGGCTTTCCGCTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCCCAGCAGCGGAAAGCCAT...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR TCA 90 bp GAATGGGCACACAAAAACAAGCCTACAGGTAACACTCATGTAAACTTCCAGCTCATTCAGCTCTTCATCTaGCAAATCCGACTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EWAHKNKPTGNTHVNFQLIQLFI*QIRLVL
Trigger: AAGAACCAGTCGGATTTGTCAGATGAAGAGCTGAAT...GAGCTGGAAGTTTACATGAGTGTTACCTGTAGGCTTGTTTTTGTGTGCCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR TCA 90 bp AACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTGGCTGCTGTCCTTGCTaGTTAAAAGCTGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NKRTREQSSCGQQNSKQSGCCPC*LKAGPG
Trigger: GCCTGGACCAGCTTTTAATCAGCAAGGACAGCAGCC...AGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTCTGTGGAATTTCTGTTaGAACGCTAGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFLWNFC*NASAWA
Trigger: AGCCCATGCACTAGCGTTTCAACAGAAATTCCACAG...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR TCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACTGTGGAATTTCTGTTaGAACGCTAGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSLWNFC*NASAWA
Trigger: AGCCCATGCACTAGCGTTTCAACAGAAATTCCACAG...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGGCTGCATGGGCCGTTTaGTTATATTCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEAAWAV*LYSEML
Trigger: CAGCATCTCAGAATATAAGCAAACGGCCCATGCAGC...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTCTCTCAGGCGCTTCTaGTCCTCTATCTTTAAGCGA +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTESLRRF*SSIFKR
Trigger: TCGCTTAAAGATAGAGGAGCAGAAGCGCCTGAGAGA...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGATTTTCACATTCTGCCTaGATTGTGCCCCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRFSHSA*IVPLER
Trigger: CCTTTCCAGGGGCACAATGCAGGCAGAATGTGAAAA...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCATTTTCACATTCTGCCTaGATTGTGCCCCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSFSHSA*IVPLER
Trigger: CCTTTCCAGGGGCACAATGCAGGCAGAATGTGAAAA...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp TCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGCTGGTTTTCACATTCTaGCTGCATTGTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: STCIISTRKQKNTRTEFLLVFTF*LHCAPG
Trigger: TCCAGGGGCACAATGCAGGCAGAATGTGAAAACCAG...CAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCCCAGGCTTGTCAAACTaGTCAAAGTCATCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVPGLSN*SKSSSP
Trigger: TGGAGATGATGACTTTGACCAGTTTGACAAGCCTGG...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAACTCTCGAGGGAACACTaGCTGCTGTCCTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQLSREH*LLSLLI
Trigger: AATCAGCAAGGACAGCAGCCAGTGTTCCCTCGAGAG...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGATCGCAGATGCTTCAATaGTCTCAAGTGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRSQMLQ*SQVLPL
Trigger: CAAGGGCAACACTTGAGACCATTGAAGCATCTGCGA...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGATGCTTTTAATCCCTaGAGGAATAGCCGGGTACAT +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIDAFNP*RNSRVH
Trigger: ATGTACCCGGCTATTCCTCCAGGGATTAAAAGCATC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR TCA 90 bp GGACAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGCATCTAAAGGTTCATTaGTTTCGATGTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GQQNSKQSNTRLQSHVHQHLKVH*FRCPAL
Trigger: AAGTGCTGGACATCGAAATCAATGAACCTTTAGATG...CTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGCGTTTGCTTATATTCTaGGATGCTGCATTATGCCGG +
Preference number: 4 (lower is better)
Translates to: TRSTCIISTRKQKNTRTERLLIF*DAALCR
Trigger: CCGGCATAATGCAGCATCTCAGAATATAAGCAAACG...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp GTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTCTGTGGAATTTCTGTTaGAACGCTAGTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: VYMHYKHSETKEHENRVLLWNFC*NASAWA
Trigger: AGCCCATGCACTAGCGTTTCAACAGAAATTCCACAG...AAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR GCA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGAGTCTTCTGTCAACTCTaGATCATGGCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRVFCQL*IMAFIL
Trigger: CAGTATGAAGGCCATGATGCAGAGTTGACAGAAGAC...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCTTCAAATTCCAGCAATaGAGCTTTGGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVFKFQQ*SFGFCR
Trigger: TCTGCAGAAGCCAAAGCTGCATTGCTGGAATTTGAA...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGAGTAGAGGCTGCAGCTaGTGTTGCTGGAACAGACTT +
Preference number: 4 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMSRGCS*CCWNRL
Trigger: AAGTCTGTTCCAGCAACAGCAGCTGCAGCCTCTACT...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATACAGGTCCAGGTGTGTaGTGTGGAAATTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNTGPGV*CGNSGG
Trigger: CCCTCCAGAATTTCCACAGCACACACCTGGACCTGT...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGCTGAAGGTTAGGCTGTaGATGTGTAGGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMLKVRL*MCRQEW
Trigger: CCATTCCTGCCTACACATGCACAGCCTAACCTTCAG...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCTTCGTAGTTCCTTCTaGTTCAGGATTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISILRSSF*FRISSL
Trigger: GAGAGAAGAAATCCTGAAGCAGAAGGAACTACGAAG...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTACCACTCGAAGGTTCTaGTTATTTGGCATTAGTCGT +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISITTRRF*LFGISR
Trigger: ACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGT...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR GCA 90 bp ACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTAGCGATGGCTTTCCGCTaGTGGGGAAGCATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TKEHENRVLVDNRIQNNLAMAFR*WGSICK
Trigger: TTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGC...TAGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR GCA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATGCGATGGCTTTCCGCTaGTGGGGAAGCATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNAMAFR*WGSICK
Trigger: TTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGC...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR GCA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATTGGCTCCTTGAACTTTaGGATGGCTTTCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNWLLEL*DGFPLL
Trigger: CAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCA...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR CCA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTAGTCTCAGAAGCAACCTaGGAATCAGTAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVVSEAT*ESVISS
Trigger: AGATGAGATTACTGATTCCCAGGTTGCTTCTGAGAC...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CCA 90 bp TCAAAGGCTAGGGCACCATCTTCCTCACCAAGCTTTCTATTTGTCCATCATCTGTCTTTTATGTCTTTCTaGAGTTCCAGGGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SKARAPSSSPSFLFVHHLSFMSF*SSRVSI
Trigger: AATGGAAACCCTGGAACTCCAGAAAGACATAAAAGA...CAGATGATGGACAAATAGAAAGCTTGGTGAGGAAGATGGTGCCCTAGCCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR TCA 90 bp GTCCAAGCAGAACCTGGTAACACACTGAAAATACAATCTTCCTGGGCAATGCATCTCTCTAGTTACATCTaGAAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: VQAEPGNTLKIQSSWAMHLSSYI*KPNNCS
Trigger: GGAACAATTATTAGGCTTTCAGATGTAACTAGAGAG...ATGCATTGCCCAGGAAGATTGTATTTTCAGTGTGTTACCAGGTTCTGCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR TCA 90 bp ACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTAGCCTTCTTGGCTGGGTaGATCCCTTGGATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TKEHENRVLVDNRIQNNLAFLAG*IPWMLL
Trigger: TAAAAGCATCCAAGGGATTCACCCAGCCAAGAAGGC...TAGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp AAGCCCCAAGCCTTGAATGCCAAGGTACATAGGTTCATATATTTGAATGTTTGTGTCTTCTGTCAACTCTaGATCATGGCCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: KPQALNAKVHRFIYLNVCVFCQL*IMAFIL
Trigger: CAGTATGAAGGCCATGATGCAGAGTTGACAGAAGAC...ACAAACATTCAAATATATGAACCTATGTACCTTGGCATTCAAGGCTTGGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR GCA 90 bp TCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGAATTCATCAGGAAACTCTaGTTCTGGTTTTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SHSRITKNKVYMHYKHSEFIRKL*FWFCFF
Trigger: GAAGAAGCAAAACCAGAAGCAGAGTTTCCTGATGAA...TTCCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp AAGCCCCAAGCCTTGAATGCCAAGGTACATAGGTTCATATATTTGAATGTTTGTCCAGGCTTGTCAAACTaGTCAAAGTCATCATCTCCA +
Preference number: 4 (lower is better)
Translates to: KPQALNAKVHRFIYLNVCPGLSN*SKSSSP
Trigger: TGGAGATGATGACTTTGACCAGTTTGACAAGCCTGG...ACAAACATTCAAATATATGAACCTATGTACCTTGGCATTCAAGGCTTGGGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGCTCCGGATTGGTCATTaGTGTTGTCAGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRLRIGH*CCQTAQ
Trigger: TTGAGCTGTCTGACAACACCAATGACCAATCCGGAG...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGGTCAACTCTGCATCATaGCCTTCATACTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRVNSAS*PSYCPS
Trigger: GGAAGGACAGTATGAAGGCCATGATGCAGAGTTGAC...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp CTTCTAAGACATCCTATGAATGCCTCAGCTCAACTGCCTGGATACCAAACAACATCTTTTATGTCTTTCTaGAGTTCCAGGGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: LLRHPMNASAQLPGYQTTSFMSF*SSRVSI
Trigger: AATGGAAACCCTGGAACTCCAGAAAGACATAAAAGA...TGTTGTTTGGTATCCAGGCAGTTGAGCTGAGGCATTCATAGGATGTCTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCGCAGTGGTGATGTCTTaGTTTTTAACAAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVAVVMS*FLTRSL
Trigger: CAGACTTCTTGTTAAAAACCAAGACATCACCACTGC...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGCAGTGGTGATGTCTTaGTTTTTAACAAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIAVVMS*FLTRSL
Trigger: CAGACTTCTTGTTAAAAACCAAGACATCACCACTGC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR TCA 90 bp GTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTATTCAGCTCTTCATCTaGCAAATCCGACTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VYMHYKHSETKEHENRVLIQLFI*QIRLVL
Trigger: AAGAACCAGTCGGATTTGTCAGATGAAGAGCTGAAT...AAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCCTCTCTAGTTACATCTaGAAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVLSSYI*KPNNCS
Trigger: GGAACAATTATTAGGCTTTCAGATGTAACTAGAGAG...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATCTCTCTAGTTACATCTaGAAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: IYLSWAASALLRNPSFTNLSSYI*KPNNCS
Trigger: GGAACAATTATTAGGCTTTCAGATGTAACTAGAGAG...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp ATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACATGCAGCTTTGGCTTCTaGAGAAAGTTCCAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: IISTRKQKNTRTEFLWTTCSFGF*RKFQSF
Trigger: GAAACTTTGGAACTTTCTGCAGAAGCCAAAGCTGCA...TGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAACCAGGCTTGTCAAACTaGTCAAAGTCATCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQPGLSN*SKSSSP
Trigger: TGGAGATGATGACTTTGACCAGTTTGACAAGCCTGG...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTAGTCAACTCTGCATCATaGCCTTCATACTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TKEHENRVLVDNRIQNNLVNSAS*PSYCPS
Trigger: GGAAGGACAGTATGAAGGCCATGATGCAGAGTTGAC...TAGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATTTGCTGATTAAAAGCTaGTCCAGGCTGAGTGAACGG +
Preference number: 4 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNLLIKS*SRLSER
Trigger: CCGTTCACTCAGCCTGGACCAGCTTTTAATCAGCAA...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp AACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTCGTTTGCTTATATTCTaGGATGCTGCATTATGCCGG +
Preference number: 4 (lower is better)
Translates to: NKRTREQSSCGQQNSKQSRLLIF*DAALCR
Trigger: CCGGCATAATGCAGCATCTCAGAATATAAGCAAACG...AGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR GCA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGCCGACTGGTTCTTTTTaGCAGACAGTAAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRPTGSF*QTVNLL
Trigger: GAGAAGATTTACTGTCTGGCAAAAAGAACCAGTCGG...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CCA 90 bp AAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCGATGCTTTTAATCCCTaGAGGAATAGCCGGGTACAT +
Preference number: 4 (lower is better)
Translates to: KQKNTRTEFLWTTEFKTIDAFNP*RNSRVH
Trigger: ATGTACCCGGCTATTCCTCCAGGGATTAAAAGCATC...GATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CAA 72 bp ATTGTGGATCAAGTAACAATTCATGTTACCATACCTTaGCTGTGCCACAATGAACTCAAAGCCTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: IVDQVTIHVTIP*LCHNELKASET
Trigger: AGTTTCAGAGGCTTTGAGTTCATTGTGGCACAGCAAAGGTATGGTAACATGAATTGTTACTTGATCCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 72 bp GTACATAGGTTCATATATTTGAATGTTTGTCCCAGTTaGTGGAACTATTTGGGAAGGATTAGTAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VHRFIYLNVCPS*WNYLGRISRCG
Trigger: GCCACACCTACTAATCCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 72 bp CAAGCCTTGAATGCCAAGGTACATAGGTTCATATATTaGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGA +
Preference number: 4 (lower is better)
Translates to: QALNAKVHRFIY*NVCPSLWNYLG
Trigger: TCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATGTACCTTGGCATTCAAGGCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 72 bp GAGAATTTGTATGTGTCCCTGAAAGATACATGCTGCTaGCTCCTCTTTAGTAGTAAAAGCAAGCATATTGTG +
Preference number: 4 (lower is better)
Translates to: ENLYVSLKDTCC*LLFSSKSKHIV
Trigger: CACAATATGCTTGCTTTTACTACTAAAGAGGAGCAAGCAGCATGTATCTTTCAGGGACACATACAAATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 72 bp TCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTaGGAATCGACTAAAATGACTAATGTGGACAGATAT +
Preference number: 4 (lower is better)
Translates to: SKGCFVESKSHL*ESTKMTNVDRY
Trigger: ATATCTGTCCACATTAGTCATTTTAGTCGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR TCA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGCATCTAAAGGTTCATTaGTTTCGATGTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRHLKVH*FRCPAL
Trigger: AAGTGCTGGACATCGAAATCAATGAACCTTTAGATG...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR GCA 90 bp AAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCCTTCGTAGTTCCTTCTaGTTCAGGATTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KQKNTRTEFLWTTEFKTILRSSF*FRISSL
Trigger: GAGAGAAGAAATCCTGAAGCAGAAGGAACTACGAAG...GATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATTCTGACAAATCCGACTaGTTCTTTTTGCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNSDKSD*FFLPDS
Trigger: ACTGTCTGGCAAAAAGAACCAGTCGGATTTGTCAGA...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CCA 90 bp ACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTAATACTGTCCTTCCTCTaGGTACTCTTGAGTATACAG +
Preference number: 4 (lower is better)
Translates to: TKEHENRVLVDNRIQNNLILSFL*VLLSIQ
Trigger: CTGTATACTCAAGAGTACCCAGAGGAAGGACAGTAT...TAGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
3UTR CAA 72 bp ATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTaGGGAAGGATTAGTAGGTGTGGCCTTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IYLNVCPSLWNY*GRISRCGLVGK
Trigger: TTTTCCAACAAGGCCACACCTACTAATCCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
3UTR CAA 72 bp TACTTCATCATAAACTTTAAAATACCCCAGCTGTCATaGCAGAATTTGGTGAAGTGTCTAAGGTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: YFIINFKIPQLS*QNLVKCLRFSH
Trigger: ATGGGAGAACCTTAGACACTTCACCAAATTCTGCAATGACAGCTGGGGTATTTTAAAGTTTATGATGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS CCA 90 bp GGGCTGCTGTTGGGGCTGTTGCGGCTGGGGCTGTGGTTGATGAGGTaGTGGCAACGGAGGATGCAAGGGTCCCTGAAGGTTAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GLLLGLLRLGLWLMR*WQRRMQGSLKVRLC
Trigger: GCACAGCCTAACCTTCAGGGACCCTTGCATCCTCCGTTGCCACCACCTCATCAACCACAGCCCCAGCCGCAACAGCCCCAACAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 90 bp GGAGGAATGAAAGGCCTGGCAGTTGCTGACCCTGGCTGGCTAAAGTaGAGGATCCCCACTGGGCCTGGGGGCTGCAGGGCTGGTCTTACA +
Preference number: 5 (lower is better)
Translates to: GGMKGLAVADPGWLK*RIPTGPGGCRAGLT
Trigger: TGTAAGACCAGCCCTGCAGCCCCCAGGCCCAGTGGGGATCCTGCACTTTAGCCAGCCAGGGTCAGCAACTGCCAGGCCTTTCATTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 90 bp TGCTGCTGCGGCTGGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGGCAAGCCTTTCCAGTAACTCCTTCTTTCTGGCACCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CCCGWCCCCCCCCCC*ASLSSNSFFLAPAC
Trigger: GCAGGCTGGTGCCAGAAAGAAGGAGTTACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCCGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 90 bp TGCTGCTGCTGCGGCTGGTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCGCAAGCCTTTCCAGTAACTCCTTCTTTCTGGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: CCCCGWCCCCCCCCC*CASLSSNSFFLAPA
Trigger: GGCTGGTGCCAGAAAGAAGGAGTTACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCCGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 90 bp GAGCCCCTGATGTGGGGTACACTGCATCCGACTGCTGCTGGGCTGTaGCTGGGCAGTCTGTACATGCGGCCTGAACTGCGGCTGAGACAT +
Preference number: 5 (lower is better)
Translates to: EPLMWGTLHPTAAGL*LGSLYMRPELRLRH
Trigger: ATGTCTCAGCCGCAGTTCAGGCCGCATGTACAGACTGCCCAGCCACAGCCCAGCAGCAGTCGGATGCAGTGTACCCCACATCAGGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 90 bp ACCACCTCCACTGTTGGCCCTGTGCATGACAGTCCTCTTCACCCCTaGCTTGGTGTCCTGAGGCCGGCCCTGAAGGGATGTCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: TTSTVGPVHDSPLHP*LGVLRPALKGCHSG
Trigger: GCCAGAGTGACATCCCTTCAGGGCCGGCCTCAGGACACCAAGCCAGGGGTGAAGAGGACTGTCATGCACAGGGCCAACAGTGGAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 90 bp GCAGCTCTTCTTCTCCAGGACCGTTCTGCACCAGGCTTGTCAAACTaGTCAAAGTCATCATCTCCAGCGCCTGCTCCTCCGCCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: AALLLQDRSAPGLSN*SKSSSPAPAPPPAP
Trigger: GGGCGCAGGCGGAGGAGCAGGCGCTGGAGATGATGACTTTGACCAGTTTGACAAGCCTGGTGCAGAACGGTCCTGGAGAAGAAGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp GTACAGCCCCTGCAGGGCTGGCCCTTAGTGTACCAAGCAGGCGTGAGGCAGAGGTTAATCACCCTGACCTaGGAGCTGACATGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: VQPLQGWPLVYQAGVRQRLITLT*ELTCGP
Trigger: TGGGCCACATGTCAGCTCCAAGGTCAGGGTGATTAA...CCTCTGCCTCACGCCTGCTTGGTACACTAAGGGCCAGCCCTGCAGGGGCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CCAGCAACACAGCCTGCACTCCAAGCTGCCTGCACAGCAGGGAGGTGCACAAACCACTTGCAGCCCTTGTaGCCCACCATAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PATQPALQAACTAGRCTNHLQPL*PTISLQ
Trigger: TTGCAGGCTTATGGTGGGCAACAAGGGCTGCAAGTG...GTTTGTGCACCTCCCTGCTGTGCAGGCAGCTTGGAGTGCAGGCTGTGTTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp ACTCAAGTGAGTATCAGTGGCCACTGCAGACGTGGAAGCCACAGAAATGGAGGGCTGCTGTTGGGGCTGTaGCGGCTGGGGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TQVSISGHCRRGSHRNGGLLLGL*RLGLWL
Trigger: CAACCACAGCCCCAGCCGCAACAGCCCCAACAGCAG...CCCTCCATTTCTGTGGCTTCCACGTCTGCAGTGGCCACTGATACTCACTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS GCA 90 bp GACACCACACAGGGCTGTGGCTTGCATTCCACCACTCGAAGGTTCTaGTTATTTGGCATTAGTCGTCCCCGGCCCATGGGACCTGCCACT +
Preference number: 5 (lower is better)
Translates to: DTTQGCGLHSTTRRF*LFGISRPRPMGPAT
Trigger: AGTGGCAGGTCCCATGGGCCGGGGACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGTGGAATGCAAGCCACAGCCCTGTGTGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 90 bp GCTAGTGCATGGGCTGGCTCCTTGAACTTTGCGATGGCTTTCCGCTaGTGGGGAAGCATCTGTAAACTCTGGATGGGGCCCACGGACATC +
Preference number: 5 (lower is better)
Translates to: ASAWAGSLNFAMAFR*WGSICKLWMGPTDI
Trigger: GATGTCCGTGGGCCCCATCCAGAGTTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGCACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS CCA 90 bp TGGGGGCTGCAGGGCTGGTCTTACAGGCCTCTCTCGAGGGAACACTaGCTGCTGTCCTTGCTGATTAAAAGCTGGTCCAGGCTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: WGLQGWSYRPLSREH*LLSLLIKSWSRLSE
Trigger: TTCACTCAGCCTGGACCAGCTTTTAATCAGCAAGGACAGCAGCCAGTGTTCCCTCGAGAGAGGCCTGTAAGACCAGCCCTGCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 90 bp GGATGGGGCCCACGGACATCAGCAGACTCTTCAGCTGGACATCAGTaGTGGATGAGGATAGACCTTCCACAGACACCACACAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GWGPRTSADSSAGHQ*WMRIDLPQTPHRAV
Trigger: CACAGCCCTGTGTGGTGTCTGTGGAAGGTCTATCCTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCTGATGTCCGTGGGCCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS CCA 90 bp AGTGCATGGGCTGGCTCCTTGAACTTTGCGATGGCTTTCCGCTGCTaGGGAAGCATCTGTAAACTCTGGATGGGGCCCACGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: SAWAGSLNFAMAFRC*GSICKLWMGPTDIS
Trigger: GCTGATGTCCGTGGGCCCCATCCAGAGTTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGTGGCAGCAAGGGCACTaGAACAGGGGTTACCACTGT +
Preference number: 5 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGWQQGH*NRGYHC
Trigger: ACAGTGGTAACCCCTGTTCAAGTGCCCTTGCTGCCA...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGAGCTGCCAGTTCCTCTaGTTCCATGGAGGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGSCQFL*FHGGLR
Trigger: TCGCAGACCTCCATGGAACAAGAGGAACTGGCAGCT...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGTGGCAGCAAGGGCACTaGAACAGGGGTTACCACTGT +
Preference number: 5 (lower is better)
Translates to: WHADKLANCRLERPALLGWQQGH*NRGYHC
Trigger: ACAGTGGTAACCCCTGTTCAAGTGCCCTTGCTGCCA...CCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGAGCTGCCAGTTCCTCTaGTTCCATGGAGGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: LARRQVGKLQTGETCTSGSCQFL*FHGGLR
Trigger: TCGCAGACCTCCATGGAACAAGAGGAACTGGCAGCT...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CCCCAGGGTGGCCCACAGCTCGGGCACAAGGAAGTGCTTCCTGACTTGTGCATTCAATGGTCTCAAGTGTaGCCCTTGATGCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: PQGGPQLGHKEVLPDLCIQWSQV*PLMLHV
Trigger: AACGTGCAGCATCAAGGGCAACACTTGAGACCATTG...AATGCACAAGTCAGGAAGCACTTCCTTGTGCCCGAGCTGTGGGCCACCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS CCA 90 bp TTTGCTTATATTCTGAGATGCTGCATTATGCCGGAGCCCCTGATGTaGGGTACACTGCATCCGACTGCTGCTGGGCTGTGGCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: FAYILRCCIMPEPLM*GTLHPTAAGLWLGS
Trigger: ACTGCCCAGCCACAGCCCAGCAGCAGTCGGATGCAGTGTACCCCACATCAGGGGCTCCGGCATAATGCAGCATCTCAGAATATAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 90 bp GCTGCTGCTGCTGCTGCGCAAGCCTTTCCAGTAACTCCTTCTTTCTaGCACCAGCCTGCTGTTGCCTTCGTAGTTCCTTCTGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: AAAAAAQAFPVTPSF*HQPAVAFVVPSASG
Trigger: TCCTGAAGCAGAAGGAACTACGAAGGCAACAGCAGGCTGGTGCCAGAAAGAAGGAGTTACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGCCCTTGAAGTGTGGGTaGATGTGGATGTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LARRQVGKLQTGETCTSGPLKCG*MWMFLG
Trigger: GCCCAAGAACATCCACATCAACCCACACTTCAAGGG...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGTTACCACTGTCCCCTaGAAGTGTGGGTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: LARRQVGKLQTGETCTSGVTTVP*KCGLMW
Trigger: CCACATCAACCCACACTTCAAGGGGACAGTGGTAAC...CCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp AGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGACCACTGGCTGCTGTCCTaGCTGATTAAAAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SWQTADWRDLHFWGSCTDHWLLS*LIKSWS
Trigger: GGACCAGCTTTTAATCAGCAAGGACAGCAGCCAGTG...GTCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTCTTCTGGAATCACCCTGTGGCTGGCTGGCACGCAGACAAGTTGGCAAACTGCTTAATCACCCTGACCTaGGAGCTGACATGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LFWNHPVAGWHADKLANCLITLT*ELTCGP
Trigger: TGGGCCACATGTCAGCTCCAAGGTCAGGGTGATTAA...GCAGTTTGCCAACTTGTCTGCGTGCCAGCCAGCCACAGGGTGATTCCAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TGGCACGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGGGCTGGGTGAATCCCTaGGATGCTTTTAATCCCTGG +
Preference number: 5 (lower is better)
Translates to: WHADKLANCRLERPALLGGWVNP*DAFNPW
Trigger: CCAGGGATTAAAAGCATCCAAGGGATTCACCCAGCC...CCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCGTGCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp AAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTGCACCGAGCATGGGCTGGCTCCTaGAACTTTGCGATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: KLANCRLERPALLGILHRAWAGS*NFAMAF
Trigger: GAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGC...TCGGTGCAGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS-3UTR CAA 90 bp AGCTGTGGGCACACGTGTTCCTGGGTATCTCATCACACTCAAAGTGGCCCTGAGGCATGGGCTGGCTCCTaGAACTTTGCGATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SCGHTCSWVSHHTQSGPEAWAGS*NFAMAF
Trigger: GAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGC...CTCAGGGCCACTTTGAGTGTGATGAGATACCCAGGAACACGTGTGCCCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS TCA 90 bp GCATTGTGCCCCTGGAAAGGGCAACAATGGGTTACCATTGGTAGGTaGTGGTGTAGCTGCCAGTTCCTCTTGTTCCATGGAGGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: ALCPWKGQQWVTIGR*WCSCQFLLFHGGLR
Trigger: TCGCAGACCTCCATGGAACAAGAGGAACTGGCAGCTACACCATCACCTACCAATGGTAACCCATTGTTGCCCTTTCCAGGGGCACAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 90 bp AGTCTAGGTGGCTGGTTAAAACTGTTGGGAACAGGTCCAGGTGTGTaGTGTGGAAATTCTGGAGGGCCTGGAAATCTTTGGGGTCCCACG +
Preference number: 5 (lower is better)
Translates to: SLGGWLKLLGTGPGV*CGNSGGPGNLWGPT
Trigger: CGTGGGACCCCAAAGATTTCCAGGCCCTCCAGAATTTCCACAGCACACACCTGGACCTGTTCCCAACAGTTTTAACCAGCCACCTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 90 bp TACTGTTCCTGGGAGCAGTGGGTTGCATCTGCTGCATGGGCCGTTTaGTTATATTCTGAGATGCTGCATTATGCCGGAGCCCCTGATGTG +
Preference number: 5 (lower is better)
Translates to: YCSWEQWVASAAWAV*LYSEMLHYAGAPDV
Trigger: CACATCAGGGGCTCCGGCATAATGCAGCATCTCAGAATATAAGCAAACGGCCCATGCAGCAGATGCAACCCACTGCTCCCAGGAACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 90 bp TGTAAACTCTGGATGGGGCCCACGGACATCAGCAGACTCTTCAGCTaGACATCAGTGGTGGATGAGGATAGACCTTCCACAGACACCACA +
Preference number: 5 (lower is better)
Translates to: CKLWMGPTDISRLFS*TSVVDEDRPSTDTT
Trigger: TGTGGTGTCTGTGGAAGGTCTATCCTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCTGATGTCCGTGGGCCCCATCCAGAGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTCGTTCTGCACCAGGCTaGTCAAACTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: RRQVGKLQTGETCTSGDPRSAPG*SNWSKS
Trigger: TGACTTTGACCAGTTTGACAAGCCTGGTGCAGAACG...AGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTTCTCCGGATTGGTCATaGGTGTTGTCAGACAGCTCA +
Preference number: 5 (lower is better)
Translates to: RRQVGKLQTGETCTSGDPSPDWS*VLSDSS
Trigger: TGAGCTGTCTGACAACACCAATGACCAATCCGGAGA...AGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTAATGCTGGGGCTGCTGTaGGGGCTGTTGCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVMLGLL*GLLRLG
Trigger: CCCCAGCCGCAACAGCCCCAACAGCAGCCCCAGCAT...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS TCA 90 bp GCCTGTGGAATTTCTGTTGAAACGCTAGTGCATGGGCTGGCTCCTTaGACTTTGCGATGGCTTTCCGCTGCTGGGGAAGCATCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: ACGISVETLVHGLAP*TLRWLSAAGEASVN
Trigger: GTTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGCACTAGCGTTTCAACAGAAATTCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 90 bp GCAAGCCTTTCCAGTAACTCCTTCTTTCTGGCACCAGCCTGCTGTTaGCTTCGTAGTTCCTTCTGCTTCAGGATTTCTTCTCTCAGGCGC +
Preference number: 5 (lower is better)
Translates to: ASLSSNSFFLAPACC*LRSSFCFRISSLRR
Trigger: GCGCCTGAGAGAAGAAATCCTGAAGCAGAAGGAACTACGAAGGCAACAGCAGGCTGGTGCCAGAAAGAAGGAGTTACTGGAAAGGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 90 bp CAATGGTCTCAAGTGTTGCCCTTGATGCTGCACGTTAGCACCAGGTaGGACAAAGTTTACCGCTTTGGGCTGAACGCTAGCAGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: QWSQVLPLMLHVSTR*DKVYRFGLNASSGD
Trigger: ATCACCACTGCTAGCGTTCAGCCCAAAGCGGTAAACTTTGTCCCACCTGGTGCTAACGTGCAGCATCAAGGGCAACACTTGAGACCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp AACAATCCTCCGAGCCTTTTGTCTCTGGAGAAGGCTGGTTATAGCTATCAGGTAACAGTCTTCCCGCACTaGCAGCCCTTGTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: NNPPSLLSLEKAGYSYQVTVFPH*QPLLPT
Trigger: GGTGGGCAACAAGGGCTGCAAGTGCGGGAAGACTGT...TACCTGATAGCTATAACCAGCCTTCTCCAGAGACAAAAGGCTCGGAGGATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATCAGGCCTCGGCTGGCTaGGAACTGGCAGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: IYLSWAASALLRNPSFTNQASAG*ELAARA
Trigger: TGCCCTTGCTGCCAGTTCCAAGCCAGCCGAGGCCTG...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTAAGTGAAGGACCACCCTTTGGAGTCCCATCAGAGGTGTACATTACTAACAATAGGGCCTGGAAATCTTaGGGGTCCCACGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LSEGPPFGVPSEVYITNNRAWKS*GSHGRP
Trigger: AGGCCTGCCGTGGGACCCCAAAGATTTCCAGGCCCT...ATTGTTAGTAATGTACACCTCTGATGGGACTCCAAAGGGTGGTCCTTCACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS TCA 90 bp TCCTGTGGAATTTCTGTTGAAACGCTAGTGCATGGGCTGGCTCCTTaGACTTTGCGATGGCTTTCCGCTGCTGGGGAAGCATCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: SCGISVETLVHGLAP*TLRWLSAAGEASVN
Trigger: GTTTACAGATGCTTCCCCAGCAGCGGAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGCACTAGCGTTTCAACAGAAATTCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133313.2
CDS GCA 90 bp TGCTGCGCAAGCCTTTCCAGTAACTCCTTCTTTCTGGCACCAGCCTaGTGTTGCCTTCGTAGTTCCTTCTGCTTCAGGATTTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: CCASLSSNSFFLAPA*CCLRSSFCFRISSL
Trigger: GAGAGAAGAAATCCTGAAGCAGAAGGAACTACGAAGGCAACAGCAGGCTGGTGCCAGAAAGAAGGAGTTACTGGAAAGGCTTGCGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 90 bp AAGGTGCTATGGGGAGTTCACGGAGATTACTGTTCCTGGGAGCAGTaGGTTGCATCTGCTGCATGGGCCGTTTGCTTATATTCTGAGATG +
Preference number: 5 (lower is better)
Translates to: KVLWGVHGDYCSWEQ*VASAAWAVCLYSEM
Trigger: CATCTCAGAATATAAGCAAACGGCCCATGCAGCAGATGCAACCCACTGCTCCCAGGAACAGTAATCTCCGTGAACTCCCCATAGCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TACCCAGCGACAGTAGATGACAACAGACCTCTGTCTCCTCCATCCTACCAAGATAGGCTGCAGCTGCTGTaGCTGGAACAGACTTCTGAT +
Preference number: 5 (lower is better)
Translates to: YPATVDDNRPLSPPSYQDRLQLL*LEQTSD
Trigger: ATCAGAAGTCTGTTCCAGCAACAGCAGCTGCAGCCT...ATCTTGGTAGGATGGAGGAGACAGAGGTCTGTTGTCATCTACTGTCGCTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAGACGGCTGGGGCTGTGGTaGATGAGGTGGTGGCAACGG +
Preference number: 5 (lower is better)
Translates to: LEEIPQCVQHEVRYFHSRRLGLW*MRWWQR
Trigger: CCGTTGCCACCACCTCATCAACCACAGCCCCAGCCG...TCTTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ATGTCCACCAGTTTAAATAGCTCTCTTCTGGAATCACCCTGTGGCTGGCTGGCATCTCAAGTGTTGCCCTaGATGCTGCACGTTAGCACC +
Preference number: 5 (lower is better)
Translates to: MSTSLNSSLLESPCGWLASQVLP*MLHVST
Trigger: GGTGCTAACGTGCAGCATCAAGGGCAACACTTGAGA...TGCCAGCCAGCCACAGGGTGATTCCAGAAGAGAGCTATTTAAACTGGTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 90 bp AAACATGTGAAGGTGCTATGGGGAGTTCACGGAGATTACTGTTCCTaGGAGCAGTGGGTTGCATCTGCTGCATGGGCCGTTTGCTTATAT +
Preference number: 5 (lower is better)
Translates to: KHVKVLWGVHGDYCS*EQWVASAAWAVCLY
Trigger: ATATAAGCAAACGGCCCATGCAGCAGATGCAACCCACTGCTCCCAGGAACAGTAATCTCCGTGAACTCCCCATAGCACCTTCACATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CGCAGACAAGTTGGCAAACTGCAGACTGGAGAGACCTGCACTTCTGGGGATCCTTCCGACTGGTTCTTTTaGCCAGACAGTAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: RRQVGKLQTGETCTSGDPSDWFF*PDSKSS
Trigger: AGAAGATTTACTGTCTGGCAAAAAGAACCAGTCGGA...AGGATCCCCAGAAGTGCAGGTCTCTCCAGTCTGCAGTTTGCCAACTTGTCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp AACAATCCTCCGAGCCTTTTGTCTCTGGAGAAGGCTGGTTATAGCTATCAGGTACACTTGCAGCCCTTGTaGCCCACCATAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: NNPPSLLSLEKAGYSYQVHLQPL*PTISLQ
Trigger: TTGCAGGCTTATGGTGGGCAACAAGGGCTGCAAGTG...TACCTGATAGCTATAACCAGCCTTCTCCAGAGACAAAAGGCTCGGAGGATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTACCGCACTTGCAGCCCTaGTTGCCCACCATAAGCCTG +
Preference number: 5 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVPHLQP*LPTISL
Trigger: CAGGCTTATGGTGGGCAACAAGGGCTGCAAGTGCGG...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp ATATACTTATCTTGGGCAGCATCAGCCCTGCTGAGAAATCCATCCTTCACAAATACAGTCTTCCCGCACTaGCAGCCCTTGTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: IYLSWAASALLRNPSFTNTVFPH*QPLLPT
Trigger: GGTGGGCAACAAGGGCTGCAAGTGCGGGAAGACTGT...ATTTGTGAAGGATGGATTTCTCAGCAGGGCTGATGCTGCCCAAGATAAGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp AGAACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACACGGCTGGGGCTGTGGTaGATGAGGTGGTGGCAACGG +
Preference number: 5 (lower is better)
Translates to: RTRSTCIISTRKQKNTRTRLGLW*MRWWQR
Trigger: CCGTTGCCACCACCTCATCAACCACAGCCCCAGCCG...TGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CAGTTGACAGCACTTAGATGGGCTAAGGCCAAGCTGGGTACAGCCCCTGCAGGGTTAAGCGATATAACCTaGTCTCTTCATCTTCATCAG +
Preference number: 5 (lower is better)
Translates to: QLTALRWAKAKLGTAPAGLSDIT*SLHLHQ
Trigger: CTGATGAAGATGAAGAGACAAGGTTATATCGCTTAA...CCCTGCAGGGGCTGTACCCAGCTTGGCCTTAGCCCATCTAAGTGCTGTCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CAATCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGTTGGTCAGCGTCACCTaGCGGGTAGGCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: QSHSRITKNKVYMHYKHSLVSVT*RVGCCL
Trigger: GAGACAGCAGCCTACCCGCAAGGTGACGCTGACCAA...CGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGGAAATTGGTCAGCGTCACCTaGCGGGTAGGCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: HIAGSRRTRSTCIISTRKLVSVT*RVGCCL
Trigger: GAGACAGCAGCCTACCCGCAAGGTGACGCTGACCAA...TTTCCGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS TCA 90 bp TGCTGCACGTTAGCACCAGGTGGGACAAAGTTTACCGCTTTGGGCTaGACGCTAGCAGTGGTGATGTCTTGGTTTTTAACAAGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: CCTLAPGGTKFTALG*TLAVVMSWFLTRSL
Trigger: CAGACTTCTTGTTAAAAACCAAGACATCACCACTGCTAGCGTTCAGCCCAAAGCGGTAAACTTTGTCCCACCTGGTGCTAACGTGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAACAGGCCTCGGCTGGCTaGGAACTGGCAGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQQASAG*ELAARA
Trigger: TGCCCTTGCTGCCAGTTCCAAGCCAGCCGAGGCCTG...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAAGGGCCTGGAAATCTTaGGGGTCCCACGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: IISTRKQKNTRTEFLWTTRAWKS*GSHGRP
Trigger: AGGCCTGCCGTGGGACCCCAAAGATTTCCAGGCCCT...TGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGGGCTGGTTAAAACTGTaGGGAACAGGTCCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: AWTSKGCFVESKSHLLESGWLKL*GTGPGV
Trigger: CACACCTGGACCTGTTCCCAACAGTTTTAACCAGCC...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTAATGCTGGGGCTGCTGTaGGGGCTGTTGCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TKEHENRVLVDNRIQNNLMLGLL*GLLRLG
Trigger: CCCCAGCCGCAACAGCCCCAACAGCAGCCCCAGCAT...TAGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTTCTAAGACATCCTATGAATGCCTCAGCTCAACTGCCTGGATACCAAACAACACACATTCTGCCTGCATaGTGCCCCTGGAAAGGGCAA +
Preference number: 5 (lower is better)
Translates to: LLRHPMNASAQLPGYQTTHILPA*CPWKGQ
Trigger: TTGCCCTTTCCAGGGGCACAATGCAGGCAGAATGTG...TGTTGTTTGGTATCCAGGCAGTTGAGCTGAGGCATTCATAGGATGTCTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCATTGGTCAGCGTCACCTaGCGGGTAGGCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSLVSVT*RVGCCL
Trigger: GAGACAGCAGCCTACCCGCAAGGTGACGCTGACCAA...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp GCATGGACTTCTAAGGGATGCTTTGTAGAAAGCAAGTCTCACCTGTTGGAATCGGAAGGTTCTGCTTATTaGGCATTAGTCGTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: AWTSKGCFVESKSHLLESEGSAY*ALVVPG
Trigger: GCCGGGGACGACTAATGCCAAATAAGCAGAACCTTC...CGATTCCAACAGGTGAGACTTGCTTTCTACAAAGCATCCCTTAGAAGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTAACACAGGGCTGTGGCTaGCATTCCACCACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVTQGCG*HSTTRR
Trigger: CCTTCGAGTGGTGGAATGCAAGCCACAGCCCTGTGT...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTACACAGGGCTGTGGCTaGCATTCCACCACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISITQGCG*HSTTRR
Trigger: CCTTCGAGTGGTGGAATGCAAGCCACAGCCCTGTGT...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp TTGTTTGGCAAAATGTTGAGCATAGCACAACTGGGCACCAGCCTCACTTATACCCGTTCTGCACCAGGCTaGTCAAACTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LFGKMLSIAQLGTSLTYTRSAPG*SNWSKS
Trigger: TGACTTTGACCAGTTTGACAAGCCTGGTGCAGAACG...GGTATAAGTGAGGCTGGTGCCCAGTTGTGCTATGCTCAACATTTTGCCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp TTGTTTGGCAAAATGTTGAGCATAGCACAACTGGGCACCAGCCTCACTTATACCTCTCCGGATTGGTCATaGGTGTTGTCAGACAGCTCA +
Preference number: 5 (lower is better)
Translates to: LFGKMLSIAQLGTSLTYTSPDWS*VLSDSS
Trigger: TGAGCTGTCTGACAACACCAATGACCAATCCGGAGA...GGTATAAGTGAGGCTGGTGCCCAGTTGTGCTATGCTCAACATTTTGCCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTGCTGTTGGGGCTGTaGCGGCTGGGGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNLLLGL*RLGLWL
Trigger: CAACCACAGCCCCAGCCGCAACAGCCCCAACAGCAG...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACATTCTGCCTGCATaGTGCCCCTGGAAAGGGCAA +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIHILPA*CPWKGQ
Trigger: TTGCCCTTTCCAGGGGCACAATGCAGGCAGAATGTG...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATCACATTCTGCCTGCATaGTGCCCCTGGAAAGGGCAA +
Preference number: 5 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHHILPA*CPWKGQ
Trigger: TTGCCCTTTCCAGGGGCACAATGCAGGCAGAATGTG...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp AAAGAAGAGCTCTTTCGGTGCAAGTACCTGTCTTTTCAGCCCATTCTACCAACAGGCTGGGTGAATCCCTaGGATGCTTTTAATCCCTGG +
Preference number: 5 (lower is better)
Translates to: KEELFRCKYLSFQPILPTGWVNP*DAFNPW
Trigger: CCAGGGATTAAAAGCATCCAAGGGATTCACCCAGCC...TGTTGGTAGAATGGGCTGAAAAGACAGGTACTTGCACCGAAAGAGCTCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGCATGGGCTGGCTCCTaGAACTTTGCGATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIAWAGS*NFAMAF
Trigger: GAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 90 bp TTCCTGTTCTCCGGATTGGTCATTGGTGTTGTCAGACAGCTCAAATaGTGTAACTATGCCAGAGGTGGTATTCAGACTGATGGTGACACC +
Preference number: 5 (lower is better)
Translates to: FLFSGLVIGVVRQLK*CNYARGGIQTDGDT
Trigger: GGTGTCACCATCAGTCTGAATACCACCTCTGGCATAGTTACATCATTTGAGCTGTCTGACAACACCAATGACCAATCCGGAGAACAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp AGCTTCTTCCTCCTCCCAGATGTTTGTAACCTGAGACTGCTCTCTTATACAGACTTCCTGTTCTCCGGATaGGTCATTGGTGTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SFFLLPDVCNLRLLSYTDFLFSG*VIGVVR
Trigger: TCTGACAACACCAATGACCAATCCGGAGAACAGGAA...GTCTGTATAAGAGAGCAGTCTCAGGTTACAAACATCTGGGAGGAGGAAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGCCGCACTTGCAGCCCTaGTTGCCCACCATAAGCCTG +
Preference number: 5 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRPHLQP*LPTISL
Trigger: CAGGCTTATGGTGGGCAACAAGGGCTGCAAGTGCGG...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp TTGGAGTCCCATCAGAGGTGTACATTACTAACAATCCATGCTATAAGACTCTCCCACTGGCTGCTGTCCTaGCTGATTAAAAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LESHQRCTLLTIHAIRLSHWLLS*LIKSWS
Trigger: GGACCAGCTTTTAATCAGCAAGGACAGCAGCCAGTG...GGAGAGTCTTATAGCATGGATTGTTAGTAATGTACACCTCTGATGGGACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAAAGCTGCCAGTTCCTCTaGTTCCATGGAGGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQSCQFL*FHGGLR
Trigger: TCGCAGACCTCCATGGAACAAGAGGAACTGGCAGCT...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTTCTCAAGTGTTGCCCTaGATGCTGCACGTTAGCACC +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISISQVLP*MLHVST
Trigger: GGTGCTAACGTGCAGCATCAAGGGCAACACTTGAGA...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTTAATCACCCTGACCTaGGAGCTGACATGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHLITLT*ELTCGP
Trigger: TGGGCCACATGTCAGCTCCAAGGTCAGGGTGATTAA...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTGGCTGGGTGAATCCCTaGGATGCTTTTAATCCCTGG +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIGWVNP*DAFNPW
Trigger: CCAGGGATTAAAAGCATCCAAGGGATTCACCCAGCC...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATGAAGGTTCTGCTTATTaGGCATTAGTCGTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHEGSAY*ALVVPG
Trigger: GCCGGGGACGACTAATGCCAAATAAGCAGAACCTTC...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGGCATGGGCTGGCTCCTaGAACTTTGCGATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEAWAGS*NFAMAF
Trigger: GAAAGCCATCGCAAAGTTCAAGGAGCCAGCCCATGC...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
CDS GCA 90 bp AAAGGTTCATTGATTTCGATGTCCAGCACTTCATCACTGTACAGCTaGTCCTCCTCTGGCTCATCCCCATATTCTATTTGGTCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: KGSLISMSSTSSLYS*SSSGSSPYSIWSSV
Trigger: GACAGAAGACCAAATAGAATATGGGGATGAGCCAGAGGAGGAGCAGCTGTACAGTGATGAAGTGCTGGACATCGAAATCAATGAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CCA 90 bp TCTTTTATGTCTTTCTGGAGTTCCAGGGTTTCCATTCCTCCCTCGTaGGTCTCAGAAGCAACCTGGGAATCAGTAATCTCATCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: SFMSFWSSRVSIPPS*VSEATWESVISSKS
Trigger: TGACTTAGATGAGATTACTGATTCCCAGGTTGCTTCTGAGACCCACGAGGGAGGAATGGAAACCCTGGAACTCCAGAAAGACATAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCGTTCTGCACCAGGCTaGTCAAACTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIRSAPG*SNWSKS
Trigger: TGACTTTGACCAGTTTGACAAGCCTGGTGCAGAACG...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTGAATCTAAAACTCTGTGACCAATCACATAGCAGGATCACGAAGAACAAGGTCTCTCCGGATTGGTCATaGGTGTTGTCAGACAGCTCA +
Preference number: 5 (lower is better)
Translates to: LNLKLCDQSHSRITKNKVSPDWS*VLSDSS
Trigger: TGAGCTGTCTGACAACACCAATGACCAATCCGGAGA...GACCTTGTTCTTCGTGATCCTGCTATGTGATTGGTCACAGAGTTTTAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CAACAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTAGGCTGCAGCTGCTGTaGCTGGAACAGACTTCTGAT +
Preference number: 5 (lower is better)
Translates to: QQNSKQSNTRLQSHVHQFRLQLL*LEQTSD
Trigger: ATCAGAAGTCTGTTCCAGCAACAGCAGCTGCAGCCT...AAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAAGGTCTACATGCATTATAAGCACTCGGAAACAAAAGAACACGAGAACAGAGGTTACCACTGTCCCCTaGAAGTGTGGGTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: TRSTCIISTRKQKNTRTEVTTVP*KCGLMW
Trigger: CCACATCAACCCACACTTCAAGGGGACAGTGGTAAC...CTCTGTTCTCGTGTTCTTTTGTTTCCGAGTGCTTATAATGCATGTAGACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAGGCTGGTTAAAACTGTaGGGAACAGGTCCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSGWLKL*GTGPGV
Trigger: CACACCTGGACCTGTTCCCAACAGTTTTAACCAGCC...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp AGTGTCAATCATAATCACCCATTTTTACCTATGTTTTACCAGAGCCTGTTGATGACACAGGGCTGTGGCTaGCATTCCACCACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: SVNHNHPFLPMFYQSLLMTQGCG*HSTTRR
Trigger: CCTTCGAGTGGTGGAATGCAAGCCACAGCCCTGTGT...CATCAACAGGCTCTGGTAAAACATAGGTAAAAATGGGTGATTATGATTGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAGGACACTACAATAAGGAAAAACTGGCTCATGTGTGTAGGCTCAAGTGTGTATTCCTGTTCTCCGGATaGGTCATTGGTGTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: TGHYNKEKLAHVCRLKCVFLFSG*VIGVVR
Trigger: TCTGACAACACCAATGACCAATCCGGAGAACAGGAA...TACACACTTGAGCCTACACACATGAGCCAGTTTTTCCTTATTGTAGTGTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CAGAATTCAAAACAATCTAACACCAGACTCCAATCCCATGTCCACCAGTTTAAATCTCAAGTGTTGCCCTaGATGCTGCACGTTAGCACC +
Preference number: 5 (lower is better)
Translates to: QNSKQSNTRLQSHVHQFKSQVLP*MLHVST
Trigger: GGTGCTAACGTGCAGCATCAAGGGCAACACTTGAGA...TTTAAACTGGTGGACATGGGATTGGAGTCTGGTGTTAGATTGTTTTGAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCACAATGGTCTCAAGTGTaGCCCTTGATGCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: FLEEIPQCVQHEVRYFHSQWSQV*PLMLHV
Trigger: AACGTGCAGCATCAAGGGCAACACTTGAGACCATTG...TGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAACCCTTGAAGTGTGGGTaGATGTGGATGTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQPLKCG*MWMFLG
Trigger: GCCCAAGAACATCCACATCAACCCACACTTCAAGGG...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TCCATCTACATCACAACTATTCTTCACATATATAGCCTGCAAGAGTTCCCACGTGATGACTGGGGAATCTaGGTTCACCTGAAACTCCTA +
Preference number: 5 (lower is better)
Translates to: SIYITTILHIYSLQEFPRDDWGI*VHLKLL
Trigger: TAGGAGTTTCAGGTGAACCAAGATTCCCCAGTCATC...ACGTGGGAACTCTTGCAGGCTATATATGTGAAGAATAGTTGTGATGTAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp GCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTTTCCTCTGGGTACTCTaGAGTATACAGTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: ASLKKFHSVCSMRSDISIFLWVL*SIQFLF
Trigger: GAACAAGAACTGTATACTCAAGAGTACCCAGAGGAA...AATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATTCCTGTTCTCCGGATaGGTCATTGGTGTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQFLFSG*VIGVVR
Trigger: TCTGACAACACCAATGACCAATCCGGAGAACAGGAA...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TACAGGGACTCTAGAAGAAACACGCTTTCATCTCAGTATGAAAGCAGGCAAACTTTGAGTATACAGTTCTaGTTCCTCAGGTTTGTGGTA +
Preference number: 5 (lower is better)
Translates to: YRDSRRNTLSSQYESRQTLSIQF*FLRFVV
Trigger: TACCACAAACCTGAGGAACAAGAACTGTATACTCAA...AGTTTGCCTGCTTTCATACTGAGATGAAAGCGTGTTTCTTCTAGAGTCCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp TTGGAGTCCCATCAGAGGTGTACATTACTAACAATCCATGCTATAAGACTCTCCTTGAGTATACAGTTCTaGTTCCTCAGGTTTGTGGTA +
Preference number: 5 (lower is better)
Translates to: LESHQRCTLLTIHAIRLSLSIQF*FLRFVV
Trigger: TACCACAAACCTGAGGAACAAGAACTGTATACTCAA...GGAGAGTCTTATAGCATGGATTGTTAGTAATGTACACCTCTGATGGGACTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp TGGCATGAATCATTACACTCATATGTACCAGGCTCAAGAGGAATGGCAATGCTTTCATCTAAAGGTTCATaGATTTCGATGTCCAGCACT +
Preference number: 5 (lower is better)
Translates to: WHESLHSYVPGSRGMAMLSSKGS*ISMSST
Trigger: AGTGCTGGACATCGAAATCAATGAACCTTTAGATGA...AAGCATTGCCATTCCTCTTGAGCCTGGTACATATGAGTGTAATGATTCATGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp CAATCACATAGCAGGATCACGAAGAACAAGGTCTACATGCATTATAAGCACTCGTCATCTAAAGGTTCATaGATTTCGATGTCCAGCACT +
Preference number: 5 (lower is better)
Translates to: QSHSRITKNKVYMHYKHSSSKGS*ISMSST
Trigger: AGTGCTGGACATCGAAATCAATGAACCTTTAGATGA...CGAGTGCTTATAATGCATGTAGACCTTGTTCTTCGTGATCCTGCTATGTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTATCATCTAAAGGTTCATaGATTTCGATGTCCAGCACT +
Preference number: 5 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVSSKGS*ISMSST
Trigger: AGTGCTGGACATCGAAATCAATGAACCTTTAGATGA...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp AGCTTCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATAGCAGTGGTGATGTCTaGGTTTTTAACAAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SFLEEIPQCVQHEVRYFHSSGDV*VFNKKS
Trigger: AGACTTCTTGTTAAAAACCAAGACATCACCACTGCT...ATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS-3UTR CAA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCAATGGTCTCAAGTGTaGCCCTTGATGCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNQWSQV*PLMLHV
Trigger: AACGTGCAGCATCAAGGGCAACACTTGAGACCATTG...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TCCTTGAAGAAATTCCACAGTGTGTGCAGCATGAGGTCAGATATTTCCATTCAATTGAGTATACAGTTCTaGTTCCTCAGGTTTGTGGTA +
Preference number: 5 (lower is better)
Translates to: SLKKFHSVCSMRSDISIQLSIQF*FLRFVV
Trigger: TACCACAAACCTGAGGAACAAGAACTGTATACTCAA...TTGAATGGAAATATCTGACCTCATGCTGCACACACTGTGGAATTTCTTCAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp CTTTACAATCCAATAAACTTCATCTTGGGAATGGGCACACAAAAACAAGCCTACTTCCTCTGGGTACTCTaGAGTATACAGTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LYNPINFILGMGTQKQAYFLWVL*SIQFLF
Trigger: GAACAAGAACTGTATACTCAAGAGTACCCAGAGGAA...GTAGGCTTGTTTTTGTGTGCCCATTCCCAAGATGAAGTTTATTGGATTGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp GAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATGATGACTGGGGAATCTaGGTTCACCTGAAACTCCTA +
Preference number: 5 (lower is better)
Translates to: ETKEHENRVLVDNRIQNNDDWGI*VHLKLL
Trigger: TAGGAGTTTCAGGTGAACCAAGATTCCCCAGTCATC...ATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp ACAGACCTCTGTCTCCTCCATCCTACCAAGATATGTGAGATAAAATCACAGGTATTAAGCGATATAACCTaGTCTCTTCATCTTCATCAG +
Preference number: 5 (lower is better)
Translates to: TDLCLLHPTKICEIKSQVLSDIT*SLHLHQ
Trigger: CTGATGAAGATGAAGAGACAAGGTTATATCGCTTAA...TACCTGTGATTTTATCTCACATATCTTGGTAGGATGGAGGAGACAGAGGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp TCCATCTACATCACAACTATTCTTCACATATATAGCCTGCAAGAGTTCCCACGTAGCAGTGGTGATGTCTaGGTTTTTAACAAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SIYITTILHIYSLQEFPRSSGDV*VFNKKS
Trigger: AGACTTCTTGTTAAAAACCAAGACATCACCACTGCT...ACGTGGGAACTCTTGCAGGCTATATATGTGAAGAATAGTTGTGATGTAGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059644.13
CDS-3UTR CAA 90 bp CATAGGTTCATATATTTGAATGTTTGTCCCAGTTTGTGGAACTATTTGGGAAGGTCCGACTGGTTCTTTTaGCCAGACAGTAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: HRFIYLNVCPSLWNYLGRSDWFF*PDSKSS
Trigger: AGAAGATTTACTGTCTGGCAAAAAGAACCAGTCGGA...CCTTCCCAAATAGTTCCACAAACTGGGACAAACATTCAAATATATGAACCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030920.6
CDS-3UTR CAA 90 bp AACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAATCTTTCCTCTGGGTACTCTaGAGTATACAGTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: NKRTREQSSCGQQNSKQSFLWVL*SIQFLF
Trigger: GAACAAGAACTGTATACTCAAGAGTACCCAGAGGAA...AGATTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS-3UTR CAA 90 bp GGAAACAAAAGAACACGAGAACAGAGTTCTTGTGGACAACAGAATTCAAAACAAAGCAGTGGTGATGTCTaGGTTTTTAACAAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: GNKRTREQSSCGQQNSKQSSGDV*VFNKKS
Trigger: AGACTTCTTGTTAAAAACCAAGACATCACCACTGCT...TTGTTTTGAATTCTGTTGTCCACAAGAACTCTGTTCTCGTGTTCTTTTGTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 72 bp AAAGGCCTGGCAGTTGCTGACCCTGGCTGGCTAAAGTaGAGGATCCCCACTGGGCCTGGGGGCTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: KGLAVADPGWLK*RIPTGPGGCRA
Trigger: AGCCCTGCAGCCCCCAGGCCCAGTGGGGATCCTGCACTTTAGCCAGCCAGGGTCAGCAACTGCCAGGCCTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 72 bp GGAGCCCCTGATGTGGGGTACACTGCATCCGACTGCTaGTGGGCTGTGGCTGGGCAGTCTGTACATGCGGCC +
Preference number: 6 (lower is better)
Translates to: GAPDVGYTASDC*WAVAGQSVHAA
Trigger: GGCCGCATGTACAGACTGCCCAGCCACAGCCCAGCAGCAGTCGGATGCAGTGTACCCCACATCAGGGGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 72 bp GGAACCCCCTTGGTCAGCGTCACCTTGCGGGTAGGCTaGTGTCTCATGTCCGGAGGCTGTGGAAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: GTPLVSVTLRVG*CLMSGGCGSRW
Trigger: CCAGCGGCTTCCACAGCCTCCGGACATGAGACAGCAGCCTACCCGCAAGGTGACGCTGACCAAGGGGGTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 72 bp TGCTGGGCTGTGGCTGGGCAGTCTGTACATGCGGCCTaGACTGCGGCTGAGACATGGGCATCAGAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: CWAVAGQSVHAA*TAAETWASEEG
Trigger: CCCCTCCTCTGATGCCCATGTCTCAGCCGCAGTTCAGGCCGCATGTACAGACTGCCCAGCCACAGCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp GGGCTGTTGCGGCTGGGGCTGTGGTTGATGAGGTGGTaGCAACGGAGGATGCAAGGGTCCCTGAAGGTTAGG +
Preference number: 6 (lower is better)
Translates to: GLLRLGLWLMRW*QRRMQGSLKVR
Trigger: CCTAACCTTCAGGGACCCTTGCATCCTCCGTTGCCACCACCTCATCAACCACAGCCCCAGCCGCAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp TTGGGGCTGTTGCGGCTGGGGCTGTGGTTGATGAGGTaGTGGCAACGGAGGATGCAAGGGTCCCTGAAGGTT +
Preference number: 6 (lower is better)
Translates to: LGLLRLGLWLMR*WQRRMQGSLKV
Trigger: AACCTTCAGGGACCCTTGCATCCTCCGTTGCCACCACCTCATCAACCACAGCCCCAGCCGCAACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS TCA 72 bp CCATGGGACCTGCCACTCCTCGTCCTCGTCCATGCATaGTGGCCTTCTTGGCTGGGTGAATCCCTTGGATGC +
Preference number: 6 (lower is better)
Translates to: PWDLPLLVLVHA*WPSWLGESLGC
Trigger: GCATCCAAGGGATTCACCCAGCCAAGAAGGCCATCATGCATGGACGAGGACGAGGAGTGGCAGGTCCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 72 bp GGCTGGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGGCAAGCCTTTCCAGTAACTCCTTCTTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: GWCCCCCCCCCC*ASLSSNSFFLA
Trigger: TGCCAGAAAGAAGGAGTTACTGGAAAGGCTTGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 72 bp AGGCTGCAGCTGCTGTTGCTGGAACAGACTTCTGATTaGCTGCTGCTGAGGTGGTGGTGGTGGTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: RLQLLLLEQTSD*LLLRWWWWWWR
Trigger: CCTCCACCACCACCACCACCACCTCAGCAGCAGCCAATCAGAAGTCTGTTCCAGCAACAGCAGCTGCAGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp AAATCTTTGGGGTCCCACGGCAGGCCTCGGCTGGCTTaGAACTGGCAGCAAGGGCACTTGAACAGGGGTTAC +
Preference number: 6 (lower is better)
Translates to: KSLGSHGRPRLA*NWQQGHLNRGY
Trigger: GTAACCCCTGTTCAAGTGCCCTTGCTGCCAGTTCCAAGCCAGCCGAGGCCTGCCGTGGGACCCCAAAGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 72 bp GAAATCTTTGGGGTCCCACGGCAGGCCTCGGCTGGCTaGGAACTGGCAGCAAGGGCACTTGAACAGGGGTTA +
Preference number: 6 (lower is better)
Translates to: EIFGVPRQASAG*ELAARALEQGL
Trigger: TAACCCCTGTTCAAGTGCCCTTGCTGCCAGTTCCAAGCCAGCCGAGGCCTGCCGTGGGACCCCAAAGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 90 bp CACAGGGCTGTGGCTTGCATTCCACCACTCGAAGGTTCTGCTTATTaGGCATTAGTCGTCCCCGGCCCATGGGACCTGCCACTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: HRAVACIPPLEGSAY*ALVVPGPWDLPLLV
Trigger: GACGAGGAGTGGCAGGTCCCATGGGCCGGGGACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGTGGAATGCAAGCCACAGCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CAA 90 bp TCCTCGTCAGCAGCTCTTCTTCTCCAGGACCGTTCTGCACCAGGCTaGTCAAACTGGTCAAAGTCATCATCTCCAGCGCCTGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: SSSAALLLQDRSAPG*SNWSKSSSPAPAPP
Trigger: CGGAGGAGCAGGCGCTGGAGATGATGACTTTGACCAGTTTGACAAGCCTGGTGCAGAACGGTCCTGGAGAAGAAGAGCTGCTGACGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS TCA 72 bp GGCTGTGGCTGTGGAGGAGGGATTAATCTTGGAGAGTaGGCCACAACAGACGGCTGTGTAGGAAGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: GCGCGGGINLGE*ATTDGCVGSRA
Trigger: TGCCCTGCTTCCTACACAGCCGTCTGTTGTGGCTCACTCTCCAAGATTAATCCCTCCTCCACAGCCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 72 bp CAGGGCTGTGGCTTGCATTCCACCACTCGAAGGTTCTaGTTATTTGGCATTAGTCGTCCCCGGCCCATGGGA +
Preference number: 6 (lower is better)
Translates to: QGCGLHSTTRRF*LFGISRPRPMG
Trigger: TCCCATGGGCCGGGGACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGTGGAATGCAAGCCACAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 72 bp CTTCTCCAGGACCGTTCTGCACCAGGCTTGTCAAACTaGTCAAAGTCATCATCTCCAGCGCCTGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: LLQDRSAPGLSN*SKSSSPAPAPP
Trigger: CGGAGGAGCAGGCGCTGGAGATGATGACTTTGACCAGTTTGACAAGCCTGGTGCAGAACGGTCCTGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CCA 72 bp CAGGGCTGGTCTTACAGGCCTCTCTCGAGGGAACACTaGCTGCTGTCCTTGCTGATTAAAAGCTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QGWSYRPLSREH*LLSLLIKSWSR
Trigger: CCTGGACCAGCTTTTAATCAGCAAGGACAGCAGCCAGTGTTCCCTCGAGAGAGGCCTGTAAGACCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 72 bp GTGGCTTGCATTCCACCACTCGAAGGTTCTGCTTATTaGGCATTAGTCGTCCCCGGCCCATGGGACCTGCCA +
Preference number: 6 (lower is better)
Translates to: VACIPPLEGSAY*ALVVPGPWDLP
Trigger: TGGCAGGTCCCATGGGCCGGGGACGACTAATGCCAAATAAGCAGAACCTTCGAGTGGTGGAATGCAAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 72 bp TGGGGCTCTCCACTGGTCCTGGAGAGGAAGTCTAGGTaGCTGGTTAAAACTGTTGGGAACAGGTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: WGSPLVLERKSR*LVKTVGNRSRC
Trigger: ACACCTGGACCTGTTCCCAACAGTTTTAACCAGCCACCTAGACTTCCTCTCCAGGACCAGTGGAGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp TGGATGGGGCCCACGGACATCAGCAGACTCTTCAGCTaGACATCAGTGGTGGATGAGGATAGACCTTCCACA +
Preference number: 6 (lower is better)
Translates to: WMGPTDISRLFS*TSVVDEDRPST
Trigger: TGTGGAAGGTCTATCCTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCTGATGTCCGTGGGCCCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS CAA 90 bp CTCCACTGGTCCTGGAGAGGAAGTCTAGGTGGCTGGTTAAAACTGTaGGGAACAGGTCCAGGTGTGTGCTGTGGAAATTCTGGAGGGCCT +
Preference number: 6 (lower is better)
Translates to: LHWSWRGSLGGWLKL*GTGPGVCCGNSGGP
Trigger: AGGCCCTCCAGAATTTCCACAGCACACACCTGGACCTGTTCCCAACAGTTTTAACCAGCCACCTAGACTTCCTCTCCAGGACCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 90 bp TCGTCCTCGTCCATGCATGATGGCCTTCTTGGCTGGGTGAATCCCTaGGATGCTTTTAATCCCTGGAGGAATAGCCGGGTACATGTGGGG +
Preference number: 6 (lower is better)
Translates to: SSSSMHDGLLGWVNP*DAFNPWRNSRVHVG
Trigger: CCCCACATGTACCCGGCTATTCCTCCAGGGATTAAAAGCATCCAAGGGATTCACCCAGCCAAGAAGGCCATCATGCATGGACGAGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 72 bp CTGCTGCATGGGCCGTTTGCTTATATTCTGAGATGCTaGATTATGCCGGAGCCCCTGATGTGGGGTACACTG +
Preference number: 6 (lower is better)
Translates to: LLHGPFAYILRC*IMPEPLMWGTL
Trigger: CAGTGTACCCCACATCAGGGGCTCCGGCATAATGCAGCATCTCAGAATATAAGCAAACGGCCCATGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS GCA 72 bp TGGGAGCAGTGGGTTGCATCTGCTGCATGGGCCGTTTaGTTATATTCTGAGATGCTGCATTATGCCGGAGCC +
Preference number: 6 (lower is better)
Translates to: WEQWVASAAWAV*LYSEMLHYAGA
Trigger: GGCTCCGGCATAATGCAGCATCTCAGAATATAAGCAAACGGCCCATGCAGCAGATGCAACCCACTGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp GCTTGGCTTTTGCATCAGTATTGCCCTGTGAGCTCCTaGAAGACACCACAGCCCTACAAGGTGGGGATGTGT +
Preference number: 6 (lower is better)
Translates to: AWLLHQYCPVSS*KTPQPYKVGMC
Trigger: ACACATCCCCACCTTGTAGGGCTGTGGTGTCTTCCAGGAGCTCACAGGGCAATACTGATGCAAAAGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp CAAGTGTTGCCCTTGATGCTGCACGTTAGCACCAGGTaGGACAAAGTTTACCGCTTTGGGCTGAACGCTAGC +
Preference number: 6 (lower is better)
Translates to: QVLPLMLHVSTR*DKVYRFGLNAS
Trigger: GCTAGCGTTCAGCCCAAAGCGGTAAACTTTGTCCCACCTGGTGCTAACGTGCAGCATCAAGGGCAACACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 72 bp CGGACATCAGCAGACTCTTCAGCTGGACATCAGTGGTaGATGAGGATAGACCTTCCACAGACACCACACAGG +
Preference number: 6 (lower is better)
Translates to: RTSADSSAGHQW*MRIDLPQTPHR
Trigger: CCTGTGTGGTGTCTGTGGAAGGTCTATCCTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCTGATGTCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS CCA 72 bp CCACGGACATCAGCAGACTCTTCAGCTGGACATCAGTaGTGGATGAGGATAGACCTTCCACAGACACCACAC +
Preference number: 6 (lower is better)
Translates to: PRTSADSSAGHQ*WMRIDLPQTPH
Trigger: GTGTGGTGTCTGTGGAAGGTCTATCCTCATCCACCACTGATGTCCAGCTGAAGAGTCTGCTGATGTCCGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000133313.2
ENSMUST00000144967.8
CDS GCA 72 bp CATCTGCTGCATGGGCCGTTTGCTTATATTCTGAGATaGTGCATTATGCCGGAGCCCCTGATGTGGGGTACA +
Preference number: 6 (lower is better)
Translates to: HLLHGPFAYILR*CIMPEPLMWGT
Trigger: TGTACCCCACATCAGGGGCTCCGGCATAATGCAGCATCTCAGAATATAAGCAAACGGCCCATGCAGCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp GTTGATGTGGATGTTCTTGGGCTGCTGAGGAGTCACTaGGGGAGGGGTCAACATCATCCTTGGAGTCTCAAT +
Preference number: 6 (lower is better)
Translates to: VDVDVLGLLRSH*GRGQHHPWSLN
Trigger: ATTGAGACTCCAAGGATGATGTTGACCCCTCCCCCAGTGACTCCTCAGCAGCCCAAGAACATCCACATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp CACTTGAACAGGGGTTACCACTGTCCCCTTGAAGTGTaGGTTGATGTGGATGTTCTTGGGCTGCTGAGGAGT +
Preference number: 6 (lower is better)
Translates to: HLNRGYHCPLEV*VDVDVLGLLRS
Trigger: ACTCCTCAGCAGCCCAAGAACATCCACATCAACCCACACTTCAAGGGGACAGTGGTAACCCCTGTTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp TGGGGAGTTCACGGAGATTACTGTTCCTGGGAGCAGTaGGTTGCATCTGCTGCATGGGCCGTTTGCTTATAT +
Preference number: 6 (lower is better)
Translates to: WGVHGDYCSWEQ*VASAAWAVCLY
Trigger: ATATAAGCAAACGGCCCATGCAGCAGATGCAACCCACTGCTCCCAGGAACAGTAATCTCCGTGAACTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 90 bp TTCTGCCTGCATTGTGCCCCTGGAAAGGGCAACAATGGGTTACCATaGGTAGGTGATGGTGTAGCTGCCAGTTCCTCTTGTTCCATGGAG +
Preference number: 6 (lower is better)
Translates to: FCLHCAPGKGNNGLP*VGDGVAASSSCSME
Trigger: CTCCATGGAACAAGAGGAACTGGCAGCTACACCATCACCTACCAATGGTAACCCATTGTTGCCCTTTCCAGGGGCACAATGCAGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CAA 90 bp GTGTGGCAGCTGTCGCAGATGCTTCAATGGTCTCAAGTGTTGCCCTaGATGCTGCACGTTAGCACCAGGTGGGACAAAGTTTACCGCTTT +
Preference number: 6 (lower is better)
Translates to: VWQLSQMLQWSQVLP*MLHVSTRWDKVYRF
Trigger: AAAGCGGTAAACTTTGTCCCACCTGGTGCTAACGTGCAGCATCAAGGGCAACACTTGAGACCATTGAAGCATCTGCGACAGCTGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 72 bp CCCTGGAAAGGGCAACAATGGGTTACCATTGGTAGGTaGTGGTGTAGCTGCCAGTTCCTCTTGTTCCATGGA +
Preference number: 6 (lower is better)
Translates to: PWKGQQWVTIGR*WCSCQFLLFHG
Trigger: TCCATGGAACAAGAGGAACTGGCAGCTACACCATCACCTACCAATGGTAACCCATTGTTGCCCTTTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 72 bp CGTCCTCGTCCATGCATGATGGCCTTCTTGGCTGGGTaGATCCCTTGGATGCTTTTAATCCCTGGAGGAATA +
Preference number: 6 (lower is better)
Translates to: RPRPCMMAFLAG*IPWMLLIPGGI
Trigger: TATTCCTCCAGGGATTAAAAGCATCCAAGGGATTCACCCAGCCAAGAAGGCCATCATGCATGGACGAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 72 bp GGCTGGTTAAAACTGTTGGGAACAGGTCCAGGTGTGTaGTGTGGAAATTCTGGAGGGCCTGGAAATCTTTGG +
Preference number: 6 (lower is better)
Translates to: GWLKLLGTGPGV*CGNSGGPGNLW
Trigger: CCAAAGATTTCCAGGCCCTCCAGAATTTCCACAGCACACACCTGGACCTGTTCCCAACAGTTTTAACCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 72 bp CATTGTGCCCCTGGAAAGGGCAACAATGGGTTACCATaGGTAGGTGATGGTGTAGCTGCCAGTTCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: HCAPGKGNNGLP*VGDGVAASSSC
Trigger: ACAAGAGGAACTGGCAGCTACACCATCACCTACCAATGGTAACCCATTGTTGCCCTTTCCAGGGGCACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CAA 72 bp TCCATGCATGATGGCCTTCTTGGCTGGGTGAATCCCTaGGATGCTTTTAATCCCTGGAGGAATAGCCGGGTA +
Preference number: 6 (lower is better)
Translates to: SMHDGLLGWVNP*DAFNPWRNSRV
Trigger: TACCCGGCTATTCCTCCAGGGATTAAAAGCATCCAAGGGATTCACCCAGCCAAGAAGGCCATCATGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 72 bp TGTCGCAGATGCTTCAATGGTCTCAAGTGTTGCCCTTaGTGCTGCACGTTAGCACCAGGTGGGACAAAGTTT +
Preference number: 6 (lower is better)
Translates to: CRRCFNGLKCCP*CCTLAPGGTKF
Trigger: AAACTTTGTCCCACCTGGTGCTAACGTGCAGCATCAAGGGCAACACTTGAGACCATTGAAGCATCTGCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CCA 72 bp TCTTTCTGGAGTTCCAGGGTTTCCATTCCTCCCTCGTaGGTCTCAGAAGCAACCTGGGAATCAGTAATCTCA +
Preference number: 6 (lower is better)
Translates to: SFWSSRVSIPPS*VSEATWESVIS
Trigger: TGAGATTACTGATTCCCAGGTTGCTTCTGAGACCCACGAGGGAGGAATGGAAACCCTGGAACTCCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
CDS CCA 72 bp GGTTACCACTCATCTCCAAAACATGTGAAGGTGCTATaGGGAGTTCACGGAGATTACTGTTCCTGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: GYHSSPKHVKVL*GVHGDYCSWEQ
Trigger: CTGCTCCCAGGAACAGTAATCTCCGTGAACTCCCCATAGCACCTTCACATGTTTTGGAGATGAGTGGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CCA 72 bp CTCCATATCCATAGGTTTGACCTGAAGGACTTTGTGTaGCAGCTGTCGCAGATGCTTCAATGGTCTCAAGTG +
Preference number: 6 (lower is better)
Translates to: LHIHRFDLKDFV*QLSQMLQWSQV
Trigger: CACTTGAGACCATTGAAGCATCTGCGACAGCTGCCACACAAAGTCCTTCAGGTCAAACCTATGGATATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 72 bp TGGGACAGATCAATCATGTGCCTGTGGAATTTCTGTTaGAACGCTAGTGCATGGGCTGGCTCCTTGAACTTT +
Preference number: 6 (lower is better)
Translates to: WDRSIMCLWNFC*NASAWAGSLNF
Trigger: AAAGTTCAAGGAGCCAGCCCATGCACTAGCGTTTCAACAGAAATTCCACAGGCACATGATTGATCTGTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS GCA 72 bp TTGATTTCGATGTCCAGCACTTCATCACTGTACAGCTaGTCCTCCTCTGGCTCATCCCCATATTCTATTTGG +
Preference number: 6 (lower is better)
Translates to: LISMSSTSSLYS*SSSGSSPYSIW
Trigger: CCAAATAGAATATGGGGATGAGCCAGAGGAGGAGCAGCTGTACAGTGATGAAGTGCTGGACATCGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS GCA 72 bp AACAAGAAGTCTGGTTTTCACATTCTGCCTGCATTGTaGCCCTGGAAAGGGCAACAATGGGTTACCATTGGT +
Preference number: 6 (lower is better)
Translates to: NKKSGFHILPAL*PWKGQQWVTIG
Trigger: ACCAATGGTAACCCATTGTTGCCCTTTCCAGGGGCACAATGCAGGCAGAATGTGAAAACCAGACTTCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS TCA 72 bp GGAAACTCTGCTTCTGGTTTTGCTTCTTCCTTAGGTTaGGCTTCAGGACTAAGTGGCTTGGCTTTTGCATCA +
Preference number: 6 (lower is better)
Translates to: GNSASGFASSLG*ASGLSGLAFAS
Trigger: TGATGCAAAAGCCAAGCCACTTAGTCCTGAAGCTCAACCTAAGGAAGAAGCAAAACCAGAAGCAGAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
CDS CAA 90 bp CCTTGTTCATACTCAGATTCCTGTTCTCCGGATTGGTCATTGGTGTaGTCAGACAGCTCAAATGATGTAACTATGCCAGAGGTGGTATTC +
Preference number: 6 (lower is better)
Translates to: PCSYSDSCSPDWSLV*SDSSNDVTMPEVVF
Trigger: GAATACCACCTCTGGCATAGTTACATCATTTGAGCTGTCTGACAACACCAATGACCAATCCGGAGAACAGGAATCTGAGTATGAACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CAA 90 bp TCATCTCCTTGTTCATACTCAGATTCCTGTTCTCCGGATTGGTCATaGGTGTTGTCAGACAGCTCAAATGATGTAACTATGCCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: SSPCSYSDSCSPDWS*VLSDSSNDVTMPEV
Trigger: CACCTCTGGCATAGTTACATCATTTGAGCTGTCTGACAACACCAATGACCAATCCGGAGAACAGGAATCTGAGTATGAACAAGGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CAA 90 bp AGTTCCAGGGTTTCCATTCCTCCTGTAAATTCATCTAAAGGTTCATaGATTTCGATGTCCAGCACTTCATCACTGTACAGCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSRVSIPPVNSSKGS*ISMSSTSSLYSCSS
Trigger: GGAGGAGCAGCTGTACAGTGATGAAGTGCTGGACATCGAAATCAATGAACCTTTAGATGAATTTACAGGAGGAATGGAAACCCTGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS TCA 72 bp ATGCCAGAGGTGGTATTCAGACTGATGGTGACACCCTaGGAACTGAAATTTTCTTCCTCTTCGTTATCACTC +
Preference number: 6 (lower is better)
Translates to: MPEVVFRLMVTP*ELKFSSSSLSL
Trigger: GAGTGATAACGAAGAGGAAGAAAATTTCAGTTCTCAGGGTGTCACCATCAGTCTGAATACCACCTCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CAA 72 bp TACTCAGATTCCTGTTCTCCGGATTGGTCATTGGTGTaGTCAGACAGCTCAAATGATGTAACTATGCCAGAG +
Preference number: 6 (lower is better)
Translates to: YSDSCSPDWSLV*SDSSNDVTMPE
Trigger: CTCTGGCATAGTTACATCATTTGAGCTGTCTGACAACACCAATGACCAATCCGGAGAACAGGAATCTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CAA 72 bp TTTAACAAGAAGTCTGGTTTTCACATTCTGCCTGCATaGTGCCCCTGGAAAGGGCAACAATGGGTTACCATT +
Preference number: 6 (lower is better)
Translates to: FNKKSGFHILPA*CPWKGQQWVTI
Trigger: AATGGTAACCCATTGTTGCCCTTTCCAGGGGCACAATGCAGGCAGAATGTGAAAACCAGACTTCTTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000059644.13
ENSMUST00000114884.8
ENSMUST00000144967.8
CDS CAA 72 bp TGTTCATACTCAGATTCCTGTTCTCCGGATTGGTCATaGGTGTTGTCAGACAGCTCAAATGATGTAACTATG +
Preference number: 6 (lower is better)
Translates to: CSYSDSCSPDWS*VLSDSSNDVTM
Trigger: CATAGTTACATCATTTGAGCTGTCTGACAACACCAATGACCAATCCGGAGAACAGGAATCTGAGTATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030920.6
ENSMUST00000059644.13
ENSMUST00000090355.11
ENSMUST00000114884.8
CDS CAA 72 bp GTTTCCATTCCTCCTGTAAATTCATCTAAAGGTTCATaGATTTCGATGTCCAGCACTTCATCACTGTACAGC +
Preference number: 6 (lower is better)
Translates to: VSIPPVNSSKGS*ISMSSTSSLYS
Trigger: GCTGTACAGTGATGAAGTGCTGGACATCGAAATCAATGAACCTTTAGATGAATTTACAGGAGGAATGGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090355.11
ENSMUST00000114884.8