Pregenerated sensors for RBM31Y (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095365Ensembl transcript IDs: ENSMUST00000179408.3
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ATCCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTaGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: IQCQKVMGNVLILQK*LQIVAISNQAVVGP Trigger: TGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCATGGACAGAATTTTCCTaGGGTAAAGGCTTTGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: GKCIDTSKVAANSGNIQSWTEFS*GKGFVV Trigger: AACTACAAAGCCTTTACCCAAGGAAAATTCTGTCCA...TGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTATGTGGAAGCTTGGGCTaGCTCCTCCTCTCCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ANSGNIQSSSCWAISYKLCGSLG*LLLSSC Trigger: ACAACTGGAGAGGAGGAGGCAGCCCAAGCTTCCACA...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTATGCTCTGGAAGTATATaGGCCAGCTCTGTGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: ANSGNIQSSSCWAISYKLCSGSI*ASSVGI Trigger: GATGCCCACAGAGCTGGCTCATATACTTCCAGAGCA...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | CTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTGAGTTAGCCATAATGTaGAAGCTTGGGCTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LQIVAISNQAVVGPFHISELAIM*KLGLPP Trigger: AGGAGGCAGCCCAAGCTTCCACATTATGGCTAACTC...ACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | ACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCCTAGAAGTACCTGCTTaGTCATTTCTTGCGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TSKVAANSGNIQSSSCWALEVPA*SFLAKV Trigger: GACTTTCGCAAGAAATGAGCAAGCAGGTACTTCTAG...GGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | GTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCTATGAGCCAGCTCTGTaGGCATCTTGGTTGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VMGNVLILQKLLQIVAISYEPAL*ASWLAS Trigger: AGAAGCCAACCAAGATGCCCACAGAGCTGGCTCATA...GGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | ACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCGCTGCCAAAGCATACTaGCTTACTCCTAAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSKVAANSGNIQSSSCWAAAKAY*LTPKAF Trigger: AAATGCTTTAGGAGTAAGCCAGTATGCTTTGGCAGC...GGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | GGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCACATTGGGGGAATCCCTaGAACCACAGGCATTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GKCIDTSKVAANSGNIQSHWGNP*NHRHLS Trigger: TGACAAATGCCTGTGGTTTCAGGGATTCCCCCAATG...TGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | ACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCTACAGTATTTGTGCTTaGCCTCAAAGCATTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TSKVAANSGNIQSSSCWAYSICA*PQSITA Trigger: AGCAGTAATGCTTTGAGGTCAAGCACAAATACTGTA...GGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | GTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATCAAAGCAGTTTGTTCTaGAGGTATCTGCGTTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: VAANSGNIQSSSCWAISYQSSLF*RYLRLY Trigger: GTACAAACGCAGATACCTTCAGAACAAACTGCTTTG...ATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | CTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCACATACTGGCTTGTCCTaGAAACATTTGGATTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LQKLLQIVAISNQAVVGPHTGLS*KHLDLL Trigger: CAACAAATCCAAATGTTTTCAGGACAAGCCAGTATG...TGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | CTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTCATCTGAGTTTGCTCTaGAAGTATATGAGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQIVAISNQAVVGPFHISHLSLL*KYMSQL Trigger: GAGCTGGCTCATATACTTCCAGAGCAAACTCAGATG...ACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | CTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATGCCAAGAAGGTATTTaGGTTTGCATCCAGAGTATA | + |
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Preference number: 4 (lower is better) Translates to: LQKLLQIVAISNQAVVGPCQEGI*VCIQSI Trigger: TATACTCTGGATGCAAACCCAAATACCTTCTTGGCA...TGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | ACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCGATATTGTATGGATTTaGCACAAGAGCAAAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSKVAANSGNIQSSSCWADIVWI*HKSKAV Trigger: AACTGCTTTGCTCTTGTGGCAAATCCATACAATATC...GGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | ATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGTACCCCAAAACCATTTaGACTTGTCCCAGAAGCATA | + |
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Preference number: 4 (lower is better) Translates to: ILQKLLQIVAISNQAVVGYPKTI*TCPRSI Trigger: TATGCTTCTGGGACAAGTCCAAATGGTTTTGGGGTA...CCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTATTTTTGTTGGGGAATTaGGATTCAAGGGCTTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: ANSGNIQSSSCWAISYKLFLLGN*DSRALA Trigger: GGCTAAAGCCCTTGAATCTCAATTCCCCAACAAAAA...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | TCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCGTCCAGAAAGCATTTTaGTCTGCCTCCAAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: SKGDGKCIDTSKVAANSGVQKAF*SASKGY Trigger: ATATCCTTTGGAGGCAGATCAAAATGCTTTCTGGAC...GCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | GTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCCCCCTACAGTATTTGTaGTTGACCTCAAAGCATTAC | + |
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Preference number: 4 (lower is better) Translates to: VMGNVLILQKLLQIVAISPLQYL*LTSKHY Trigger: GTAATGCTTTGAGGTCAAGCACAAATACTGTAGGGG...GGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCAC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTAGAAGGTATTTGGGTTTaGATCCAGAGTATAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: ANSGNIQSSSCWAISYKLEGIWV*IQSIVA Trigger: AGCCACTATACTCTGGATGCAAACCCAAATACCTTC...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGATCCCAAAAGCATCTaGGTATGTTCCCAAAGGATA | + |
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Preference number: 4 (lower is better) Translates to: VLILQKLLQIVAISNQAVDPKSI*VCSQRI Trigger: TATCCTTTGGGAACATACTCAGATGCTTTTGGGATC...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | GTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATCAAAAATCTTTTTGTTaGGGAATTGAGATTCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: VAANSGNIQSSSCWAISYQKSFC*GIEIQG Trigger: CCCTTGAATCTCAATTCCCCAACAAAAAGATTTTTG...ATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTCTGGAGCCAATGAAATaGTACCTGTTTTCTAAGACC | + |
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Preference number: 4 (lower is better) Translates to: VLILQKLLQIVAISNQAVLEPMK*YLFSKT Trigger: GGTCTTAGAAAACAGGTACCATTTCATTGGCTCCAG...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | CCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATGTCCCAAGAGTATACTaGCTTGCCAAGAAGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: PMSKGDGKCIDTSKVAANVPRVY*LAKKVF Trigger: AAATACCTTCTTGGCAAGCCAGTATACTCTTGGGAC...ATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | TCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCGTACCCAAACTATACTaGCTTACCCCAAAACCATTT | + |
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Preference number: 4 (lower is better) Translates to: SKGDGKCIDTSKVAANSGVPKLY*LTPKPF Trigger: AAATGGTTTTGGGGTAAGCCAGTATAGTTTGGGTAC...GCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | CTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTCTCCAAGAACATACTaGCTTGTCCTGAAAACATTT | + |
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Preference number: 4 (lower is better) Translates to: LQIVAISNQAVVGPFHISSPRTY*LVLKTF Trigger: AAATGTTTTCAGGACAAGCCAGTATGTTCTTGGAGA...ACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | GTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCTCACCATTAGAGTCTTaGAAACCTGGAAGTGTATTG | + |
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Preference number: 4 (lower is better) Translates to: VMGNVLILQKLLQIVAISSPLES*KPGSVL Trigger: CAATACACTTCCAGGTTTCCAAGACTCTAATGGTGA...GGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR TCA 90 bp | GTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCTGTCAAAGTTACATCTaGGTTTGCTCTGGAAGTATA | + |
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Preference number: 4 (lower is better) Translates to: VMGNVLILQKLLQIVAISCQSYI*VCSGSI Trigger: TATACTTCCAGAGCAAACTCAGATGTAACTTTGACA...GGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTAAACCTGGAAGTGTATTaGAGACATTCAGAAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: ANSGNIQSSSCWAISYKLNLEVY*RHSENC Trigger: GCAATTTTCTGAATGTCTGCAATACACTTCCAGGTT...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTAGAGTCTTGGAAACCTaGAAGTGTATTGCAGACATT | + |
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Preference number: 4 (lower is better) Translates to: VLILQKLLQIVAISNQAVRVLET*KCIADI Trigger: AATGTCTGCAATACACTTCCAGGTTTCCAAGACTCT...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | ATCCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAACTATCTGCCCAAATGTaGCAAAGTAAGCTCTTATTT | + |
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Preference number: 4 (lower is better) Translates to: IQCQKVMGNVLILQKLLQLSAQM*QSKLLF Trigger: AAATAAGAGCTTACTTTGGCACATTTGGGCAGATAG...TTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | TCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCATTTTCTTTAGGGTATaGCATTTTAACTTCGCAACG | + |
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Preference number: 4 (lower is better) Translates to: SKGDGKCIDTSKVAANSGIFFRV*HFNFAT Trigger: CGTTGCGAAGTTAAAATGGCATACCCTAAAGAAAAT...GCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR GCA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTTGTTCTGAAGGTATCTaGGTTTGTACCCAAACTATA | + |
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Preference number: 4 (lower is better) Translates to: VLILQKLLQIVAISNQAVCSEGI*VCTQTI Trigger: TATAGTTTGGGTACAAACGCAGATACCTTCAGAACA...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | CCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATGCCTCCAAAGGATATTaGTTTATCCCGAAAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: PMSKGDGKCIDTSKVAANASKGY*FIPKVF Trigger: AAATACTTTCGGGATAAACCAATATCCTTTGGAGGC...ATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CCA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTTGTCCAGATATTGTATaGATTTGCCACAAGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VLILQKLLQIVAISNQAVCPDIV*ICHKSK Trigger: TTTGCTCTTGTGGCAAATCCATACAATATCTGGACA...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CCA 90 bp | ATTTCTTGCGAAAGTCCCCCGATGAACATCTTACTGGCATCCTGTTaGTTCTTGGTGGCATCGATTTTGAACCCTTCCCGGAATTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ISCESPPMNILLASC*FLVASILNPSRNCS Trigger: AGAGCAATTCCGGGAAGGGTTCAAAATCGATGCCACCAAGAACCAACAGGATGCCAGTAAGATGTTCATCGGGGGACTTTCGCAAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CAA 90 bp | ACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCAGCTCTGTGGGCATCTaGGTTGGCTTCTTGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TSKVAANSGNIQSSSCWASSVGI*VGFLSF Trigger: GAAGCTCAAGAAGCCAACCAAGATGCCCACAGAGCT...GGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS GCA 90 bp | GTATGGATTTGCCACAAGAGCAAAGCAGTTTGTTCTGAAGGTATCTaGGTTTGTACCCAAACTATACTGGCTTACCCCAAAACCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: VWICHKSKAVCSEGI*VCTQTILAYPKTIW Trigger: CCAAATGGTTTTGGGGTAAGCCAGTATAGTTTGGGTACAAACGCAGATACCTTCAGAACAAACTGCTTTGCTCTTGTGGCAAATCCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS TCA 90 bp | TCCAGATATTGTATGGATTTGCCACAAGAGCAAAGCAGTTTGTTCTaGAGGTATCTGCGTTTGTACCCAAACTATACTGGCTTACCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SRYCMDLPQEQSSLF*RYLRLYPNYTGLPQ Trigger: TTGGGGTAAGCCAGTATAGTTTGGGTACAAACGCAGATACCTTCAGAACAAACTGCTTTGCTCTTGTGGCAAATCCATACAATATCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS TCA 90 bp | TCTGAGTATGTTCCCAAAGGATACTGGTTTGTCCAGAAAGCATTTTaGTCTGCCTCCAAAGGATATTGGTTTATCCCGAAAGTATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SEYVPKGYWFVQKAF*SASKGYWFIPKVFG Trigger: CCCAAATACTTTCGGGATAAACCAATATCCTTTGGAGGCAGATCAAAATGCTTTCTGGACAAACCAGTATCCTTTGGGAACATACTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS TCA 90 bp | ACTCGAAGGCATTTGGGTTTTCTCCAAGAACATACTGGCTTGTCCTaGAAACATTTGGATTTGTTGCCAAAACATAGTGGTTTGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TRRHLGFLQEHTGLS*KHLDLLPKHSGLSR Trigger: TCTGGACAAACCACTATGTTTTGGCAACAAATCCAAATGTTTTCAGGACAAGCCAGTATGTTCTTGGAGAAAACCCAAATGCCTTCGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CCA 90 bp | TACTGGCTTACTCCTAAAGCATTTGGGTATGTTCCCAGAGTGTATTaGCTTGTTCTTAAGGTGTTTGAAATTGTCCCAAGAGTATACTGG | + |
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Preference number: 5 (lower is better) Translates to: YWLTPKAFGYVPRVY*LVLKVFEIVPRVYW Trigger: CCAGTATACTCTTGGGACAATTTCAAACACCTTAAGAACAAGCCAATACACTCTGGGAACATACCCAAATGCTTTAGGAGTAAGCCAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CAA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTCCTCCTCCTCTCCAGTaGTTTTCTAACTCCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: VLILQKLLQIVAISNQAVPPPLQ*FSNSTA Trigger: AGCTGTGGAGTTAGAAAACAACTGGAGAGGAGGAGG...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CAA 90 bp | TCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCTTCACATGGAAAGCATaGGGGGAATCCCTGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: SKGDGKCIDTSKVAANSGFTWKA*GESLKP Trigger: TGGTTTCAGGGATTCCCCCAATGCTTTCCATGTGAA...GCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CAA 90 bp | GTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATCTACAGTATTTGTGCTaGACCTCAAAGCATTACTGC | + |
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Preference number: 5 (lower is better) Translates to: VAANSGNIQSSSCWAISYLQYLC*TSKHYC Trigger: GCAGTAATGCTTTGAGGTCAAGCACAAATACTGTAG...ATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS-3UTR CAA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTATTACCCCAAAACCATTaGGACTTGTCCCAGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ANSGNIQSSSCWAISYKLLPQNH*DLSQKH Trigger: ATGCTTCTGGGACAAGTCCAAATGGTTTTGGGGTAA...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATATCACCATTAGAGTCTaGGAAACCTGGAAGTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VAANSGNIQSSSCWAISYITIRV*ETWKCI Trigger: AATACACTTCCAGGTTTCCAAGACTCTAATGGTGAT...ATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATCATTACCAAGGAGAGTaGACTGGCTTATTTGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VAANSGNIQSSSCWAISYHYQGE*TGLFEH Trigger: ATGTTCAAATAAGCCAGTCAACTCTCCTTGGTAATG...ATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS GCA 90 bp | TTCTCCAAGAACATACTGGCTTGTCCTGAAAACATTTGGATTTGTTaGCAAAACATAGTGGTTTGTCCAGATATTGTATGGATTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSKNILACPENIWIC*QNIVVCPDIVWICH Trigger: GTGGCAAATCCATACAATATCTGGACAAACCACTATGTTTTGGCAACAAATCCAAATGTTTTCAGGACAAGCCAGTATGTTCTTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCATTTCATATAAGTTATCTAGAAGTACCTGCTaGCTCATTTCTTGCGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ANSGNIQSSSCWAISYKLSRSTC*LISCES Trigger: ACTTTCGCAAGAAATGAGCAAGCAGGTACTTCTAGA...TAACTTATATGAAATGGCCCAACAACTGCTTGATTGGATATTGCCACTATTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTAGAAGGTATTTGGGTTaGCATCCAGAGTATAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLILQKLLQIVAISNQAVRRYLG*HPEYSG Trigger: GCCACTATACTCTGGATGCAAACCCAAATACCTTCT...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | ATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTGTTGGGCCAGAGTGTATTGGCTaGTTCTTAAGGTGTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILQKLLQIVAISNQAVVGPECIG*FLRCLK Trigger: TTTCAAACACCTTAAGAACAAGCCAATACACTCTGG...CCCAACAACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | ATCCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAACAAAACCATTTGGACTaGTCCCAGAAGCATATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQCQKVMGNVLILQKLLQQNHLD*SQKHIG Trigger: GCCAATATGCTTCTGGGACAAGTCCAAATGGTTTTG...TTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | ATCCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAAACTGTGGCACTGTCTTaGAAAAGCACGAATCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IQCQKVMGNVLILQKLLQTVALS*KSTNPN Trigger: ATTTGGATTCGTGCTTTTCAAAGACAGTGCCACAGT...TTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | ATCCAATGTCAAAAGGTGATGGGAAATGTATTGATACTTCAAAAGTTGCTGCAACTTTTTGTTGGGGAATaGAGATTCAAGGGCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQCQKVMGNVLILQKLLQLFVGE*RFKGFS Trigger: GCTAAAGCCCTTGAATCTCAATTCCCCAACAAAAAG...TTGCAGCAACTTTTGAAGTATCAATACATTTCCCATCACCTTTTGACATTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCATTGCCAAGAAGGTATTaGGGTTTGCATCCAGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GKCIDTSKVAANSGNIQSLPRRY*GLHPEY Trigger: ATACTCTGGATGCAAACCCAAATACCTTCTTGGCAA...TGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCATTACTCCTAAAGCATTaGGGTATGTTCCCAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKCIDTSKVAANSGNIQSLLLKH*GMFPEC Trigger: ACACTCTGGGAACATACCCAAATGCTTTAGGAGTAA...TGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTTTGACTCGAAGGCATTaGGGTTTTCTCCAAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VLILQKLLQIVAISNQAVLTRRH*GFLQEH Trigger: ATGTTCTTGGAGAAAACCCAAATGCCTTCGAGTCAA...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTAAGTTACATCTGAGTTaGCTCTGGAAGTATATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLILQKLLQIVAISNQAVKLHLS*LWKYMS Trigger: GCTCATATACTTCCAGAGCAAACTCAGATGTAACTT...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTTTAAGGTGTTTGAAATaGTCCCAAGAGTATACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLILQKLLQIVAISNQAVLRCLK*SQEYTG Trigger: GCCAGTATACTCTTGGGACAATTTCAAACACCTTAA...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGATATTGTATGGATTaGCCACAAGAGCAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKCIDTSKVAANSGNIQSRYCMD*PQEQSS Trigger: ACTGCTTTGCTCTTGTGGCAAATCCATACAATATCT...TGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CCA 90 bp | ATAACTATAGAGGACGAAATAATCACCATTAGAGTCTTGGAAACCTaGAAGTGTATTGCAGACATTCAGAAAATTGCCATATACTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ITIEDEIITIRVLET*KCIADIQKIAIYLR Trigger: TCTCAAGTATATGGCAATTTTCTGAATGTCTGCAATACACTTCCAGGTTTCCAAGACTCTAATGGTGATTATTTCGTCCTCTATAGTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAGCAGTTCCAAAACATAGTGGTTaGTCCAGATATTGTATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLILQKLLQIVAISNQAVPKHSG*SRYCMD Trigger: ATCCATACAATATCTGGACAAACCACTATGTTTTGG...AACTGCTTGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTATTGATACTTCAAAAGTTGCTGCAAATAGTGGCAATATCCAATCAAAACCTGGAAGTGTATaGCAGACATTCAGAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: GKCIDTSKVAANSGNIQSKPGSV*QTFRKL Trigger: CAATTTTCTGAATGTCTGCAATACACTTCCAGGTTT...TGATTGGATATTGCCACTATTTGCAGCAACTTTTGAAGTATCAATACATTTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS TCA 72 bp | TATGAGCCAGCTCTGTGGGCATCTTGGTTGGCTTCTTaGGCTTCGGAGTTAGCCATAATGTGGAAGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YEPALWASWLAS*ASELAIMWKLG Trigger: CCCAAGCTTCCACATTATGGCTAACTCCGAAGCTCAAGAAGCCAACCAAGATGCCCACAGAGCTGGCTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CCA 72 bp | GAAAGTCCCCCGATGAACATCTTACTGGCATCCTGTTaGTTCTTGGTGGCATCGATTTTGAACCCTTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ESPPMNILLASC*FLVASILNPSR Trigger: CCGGGAAGGGTTCAAAATCGATGCCACCAAGAACCAACAGGATGCCAGTAAGATGTTCATCGGGGGACTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | CCCCCGATGAACATCTTACTGGCATCCTGTTGGTTCTaGGTGGCATCGATTTTGAACCCTTCCCGGAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPMNILLASCWF*VASILNPSRNC Trigger: GCAATTCCGGGAAGGGTTCAAAATCGATGCCACCAAGAACCAACAGGATGCCAGTAAGATGTTCATCGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | CGAAAGTCCCCCGATGAACATCTTACTGGCATCCTGTaGGTTCTTGGTGGCATCGATTTTGAACCCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RKSPDEHLTGIL*VLGGIDFEPFP Trigger: CGGGAAGGGTTCAAAATCGATGCCACCAAGAACCAACAGGATGCCAGTAAGATGTTCATCGGGGGACTTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | TGCGAAAGTCCCCCGATGAACATCTTACTGGCATCCTGTTGGTTCTaGGTGGCATCGATTTTGAACCCTTCCCGGAATTGCTCTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CESPPMNILLASCWF*VASILNPSRNCSVS Trigger: TGAAACAGAGCAATTCCGGGAAGGGTTCAAAATCGATGCCACCAAGAACCAACAGGATGCCAGTAAGATGTTCATCGGGGGACTTTCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | CATTTCTTGCGAAAGTCCCCCGATGAACATCTTACTGGCATCCTGTaGGTTCTTGGTGGCATCGATTTTGAACCCTTCCCGGAATTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HFLRKSPDEHLTGIL*VLGGIDFEPFPELL Trigger: GAGCAATTCCGGGAAGGGTTCAAAATCGATGCCACCAAGAACCAACAGGATGCCAGTAAGATGTTCATCGGGGGACTTTCGCAAGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | GAGTTAGCCATAATGTGGAAGCTTGGGCTGCCTCCTCCTCTCCAGTaGTTTTCTAACTCCACAGCTGGAACAGATTTTCTTGTCCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: ELAIMWKLGLPPPLQ*FSNSTAGTDFLVLS Trigger: GGATAGGACAAGAAAATCTGTTCCAGCTGTGGAGTTAGAAAACAACTGGAGAGGAGGAGGCAGCCCAAGCTTCCACATTATGGCTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS GCA 72 bp | TTCTTGGTGGCATCGATTTTGAACCCTTCCCGGAATTaGTCTGTTTCATTATCCTTTTCCACAGCGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLVASILNPSRN*SVSLSFSTARL Trigger: CAGCCTCGCTGTGGAAAAGGATAATGAAACAGAGCAATTCCGGGAAGGGTTCAAAATCGATGCCACCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CCA 72 bp | TGTCCCAAGAGTATACTGGCTTGCCAAGAAGGTATTTaGGTTTGCATCCAGAGTATAGTGGCTTACCCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CPKSILACQEGI*VCIQSIVAYPY Trigger: GTAGGGGTAAGCCACTATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | GTTCTTGGTGGCATCGATTTTGAACCCTTCCCGGAATaGCTCTGTTTCATTATCCTTTTCCACAGCGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLGGIDFEPFPE*LCFIILFHSEA Trigger: AGCCTCGCTGTGGAAAAGGATAATGAAACAGAGCAATTCCGGGAAGGGTTCAAAATCGATGCCACCAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | ATAATGTGGAAGCTTGGGCTGCCTCCTCCTCTCCAGTaGTTTTCTAACTCCACAGCTGGAACAGATTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IMWKLGLPPPLQ*FSNSTAGTDFL Trigger: AAGAAAATCTGTTCCAGCTGTGGAGTTAGAAAACAACTGGAGAGGAGGAGGCAGCCCAAGCTTCCACATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | TTGTCCCAAGAGTATACTGGCTTGCCAAGAAGGTATTaGGGTTTGCATCCAGAGTATAGTGGCTTACCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LSQEYTGLPRRY*GLHPEYSGLPL Trigger: TAGGGGTAAGCCACTATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | CTGCCTCCAAAGGATATTGGTTTATCCCGAAAGTATTaGGGTACGCTGCCAAAGCATACTGGCTTACTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LPPKDIGLSRKY*GTLPKHTGLLL Trigger: TAGGAGTAAGCCAGTATGCTTTGGCAGCGTACCCAAATACTTTCGGGATAAACCAATATCCTTTGGAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS TCA 72 bp | CATTCGAGTTCACATGGAAAGCATTGGGGGAATCCCTaGAACCACAGGCATTTGTCAAAGTTACATCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSSSHGKHWGNP*NHRHLSKLHLS Trigger: ACTCAGATGTAACTTTGACAAATGCCTGTGGTTTCAGGGATTCCCCCAATGCTTTCCATGTGAACTCGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS GCA 72 bp | TGCCACAAGAGCAAAGCAGTTTGTTCTGAAGGTATCTaGGTTTGTACCCAAACTATACTGGCTTACCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CHKSKAVCSEGI*VCTQTILAYPK Trigger: TTTGGGGTAAGCCAGTATAGTTTGGGTACAAACGCAGATACCTTCAGAACAAACTGCTTTGCTCTTGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | CAAGAGTATACTGGCTTGCCAAGAAGGTATTTGGGTTaGCATCCAGAGTATAGTGGCTTACCCCTACAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: QEYTGLPRRYLG*HPEYSGLPLQY Trigger: ATACTGTAGGGGTAAGCCACTATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS GCA 72 bp | TTTACTCAGCTGTCTAGCAGGATTTTCTTTAGGGTATaGCATTTTAACTTCGCAACGGCTGGAGCCAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FTQLSSRIFFRV*HFNFATAGANE Trigger: TTCATTGGCTCCAGCCGTTGCGAAGTTAAAATGGCATACCCTAAAGAAAATCCTGCTAGACAGCTGAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS GCA 72 bp | AAGAGTATACTGGCTTGCCAAGAAGGTATTTGGGTTTaGATCCAGAGTATAGTGGCTTACCCCTACAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: KSILACQEGIWV*IQSIVAYPYSI Trigger: AATACTGTAGGGGTAAGCCACTATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CCA 72 bp | GCCATTTTAACTTCGCAACGGCTGGAGCCAATGAAATaGTACCTGTTTTCTAAGACCTTTCTAACGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AILTSQRLEPMK*YLFSKTFLTEF Trigger: AAACTCCGTTAGAAAGGTCTTAGAAAACAGGTACCATTTCATTGGCTCCAGCCGTTGCGAAGTTAAAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | TGTCCAGAAAGCATTTTGATCTGCCTCCAAAGGATATaGGTTTATCCCGAAAGTATTTGGGTACGCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CPESILICLQRI*VYPESIWVRCQ Trigger: TTGGCAGCGTACCCAAATACTTTCGGGATAAACCAATATCCTTTGGAGGCAGATCAAAATGCTTTCTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | TGTTTGAAATTGTCCCAAGAGTATACTGGCTTGCCAAGAAGGTATTaGGGTTTGCATCCAGAGTATAGTGGCTTACCCCTACAGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLKLSQEYTGLPRRY*GLHPEYSGLPLQYL Trigger: CAAATACTGTAGGGGTAAGCCACTATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACAATTTCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | GGCTTGTTCTTAAGGTGTTTGAAATTGTCCCAAGAGTATACTGGCTaGCCAAGAAGGTATTTGGGTTTGCATCCAGAGTATAGTGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GLFLRCLKLSQEYTG*PRRYLGLHPEYSGL Trigger: TAAGCCACTATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACAATTTCAAACACCTTAAGAACAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS TCA 72 bp | CAGAGTATAGTGGCTTACCCCTACAGTATTTGTGCTTaGCCTCAAAGCATTACTGCTTGCTATGAAAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSIVAYPYSICA*PQSITACYESS Trigger: ACTACTTTCATAGCAAGCAGTAATGCTTTGAGGTCAAGCACAAATACTGTAGGGGTAAGCCACTATACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS TCA 72 bp | GTTCCCAAAGGATACTGGTTTGTCCAGAAAGCATTTTaGTCTGCCTCCAAAGGATATTGGTTTATCCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VPKGYWFVQKAF*SASKGYWFIPK Trigger: TTTCGGGATAAACCAATATCCTTTGGAGGCAGATCAAAATGCTTTCTGGACAAACCAGTATCCTTTGGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CCA 72 bp | GTTCTTAAGGTGTTTGAAATTGTCCCAAGAGTATACTaGCTTGCCAAGAAGGTATTTGGGTTTGCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLKVFEIVPRVY*LAKKVFGFASR Trigger: TCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACAATTTCAAACACCTTAAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CCA 72 bp | GACTCGAAGGCATTTGGGTTTTCTCCAAGAACATACTaGCTTGTCCTGAAAACATTTGGATTTGTTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DSKAFGFSPRTY*LVLKTFGFVAK Trigger: TTTGGCAACAAATCCAAATGTTTTCAGGACAAGCCAGTATGTTCTTGGAGAAAACCCAAATGCCTTCGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | TTTGTCACAAAAACATTCGAGTTCACATGGAAAGCATaGGGGGAATCCCTGAAACCACAGGCATTTGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: FVTKTFEFTWKA*GESLKPQAFVK Trigger: TTTGACAAATGCCTGTGGTTTCAGGGATTCCCCCAATGCTTTCCATGTGAACTCGAATGTTTTTGTGACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 72 bp | CAAAAGCATCTGAGTATGTTCCCAAAGGATACTGGTTaGTCCAGAAAGCATTTTGATCTGCCTCCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QKHLSMFPKDTG*SRKHFDLPPKD Trigger: ATCCTTTGGAGGCAGATCAAAATGCTTTCTGGACAAACCAGTATCCTTTGGGAACATACTCAGATGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | CATTTGGGTATGTTCCCAGAGTGTATTGGCTTGTTCTTAAGGTGTTaGAAATTGTCCCAAGAGTATACTGGCTTGCCAAGAAGGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: HLGMFPECIGLFLRC*KLSQEYTGLPRRYL Trigger: CAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACAATTTCAAACACCTTAAGAACAAGCCAATACACTCTGGGAACATACCCAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
||
| CDS CAA 90 bp | GTAGTTGAATTTGTCACAAAAACATTCGAGTTCACATGGAAAGCATaGGGGGAATCCCTGAAACCACAGGCATTTGTCAAAGTTACATCT | + |
|
Preference number: 6 (lower is better) Translates to: VVEFVTKTFEFTWKA*GESLKPQAFVKVTS Trigger: AGATGTAACTTTGACAAATGCCTGTGGTTTCAGGGATTCCCCCAATGCTTTCCATGTGAACTCGAATGTTTTTGTGACAAATTCAACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CCA 72 bp | ACTCCTAAAGCATTTGGGTATGTTCCCAGAGTGTATTaGCTTGTTCTTAAGGTGTTTGAAATTGTCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: TPKAFGYVPRVY*LVLKVFEIVPR Trigger: TCTTGGGACAATTTCAAACACCTTAAGAACAAGCCAATACACTCTGGGAACATACCCAAATGCTTTAGGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 72 bp | TTAAGGTGTTTGAAATTGTCCCAAGAGTATACTGGCTaGCCAAGAAGGTATTTGGGTTTGCATCCAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: LRCLKLSQEYTG*PRRYLGLHPEY Trigger: ATACTCTGGATGCAAACCCAAATACCTTCTTGGCAAGCCAGTATACTCTTGGGACAATTTCAAACACCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 90 bp | TACCTGTTTTCTAAGACCTTTCTAACGGAGTTTTCATCCATGTATTaGATAAAGCCGAAAGCTCTTCTTTCCCGTGTATCTGAACACAGT | + |
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Preference number: 6 (lower is better) Translates to: YLFSKTFLTEFSSMY*IKPKALLSRVSEHS Trigger: ACTGTGTTCAGATACACGGGAAAGAAGAGCTTTCGGCTTTATCAAATACATGGATGAAAACTCCGTTAGAAAGGTCTTAGAAAACAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS TCA 72 bp | CATTTGGGTTTTCTCCAAGAACATACTGGCTTGTCCTaGAAACATTTGGATTTGTTGCCAAAACATAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: HLGFLQEHTGLS*KHLDLLPKHSG Trigger: ACCACTATGTTTTGGCAACAAATCCAAATGTTTTCAGGACAAGCCAGTATGTTCTTGGAGAAAACCCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS GCA 72 bp | CAAAGGATACTGGTTTGTCCAGAAAGCATTTTGATCTaGCTCCAAAGGATATTGGTTTATCCCGAAAGTATT | + |
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Preference number: 6 (lower is better) Translates to: QRILVCPESILI*LQRILVYPESI Trigger: AATACTTTCGGGATAAACCAATATCCTTTGGAGGCAGATCAAAATGCTTTCTGGACAAACCAGTATCCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS GCA 72 bp | TCCTCCTCTTCCAACTGTCCCACAAAAGTTTCCATTTaGTCCGAAGTTATGTTGATTTGGTCCAAAATTATT | + |
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Preference number: 6 (lower is better) Translates to: SSSSNCPTKVSI*SEVMLIWSKII Trigger: AATAATTTTGGACCAAATCAACATAACTTCGGAGCAAATGGAAACTTTTGTGGGACAGTTGGAAGAGGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CCA 72 bp | GAGGACGAAATAATCACCATTAGAGTCTTGGAAACCTaGAAGTGTATTGCAGACATTCAGAAAATTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: EDEIITIRVLET*KCIADIQKIAI Trigger: TATGGCAATTTTCTGAATGTCTGCAATACACTTCCAGGTTTCCAAGACTCTAATGGTGATTATTTCGTCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 72 bp | TCTAAGACCTTTCTAACGGAGTTTTCATCCATGTATTaGATAAAGCCGAAAGCTCTTCTTTCCCGTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: SKTFLTEFSSMY*IKPKALLSRVS Trigger: AGATACACGGGAAAGAAGAGCTTTCGGCTTTATCAAATACATGGATGAAAACTCCGTTAGAAAGGTCTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 72 bp | CTAAAGCATTTGGGTATGTTCCCAGAGTGTATTGGCTaGTTCTTAAGGTGTTTGAAATTGTCCCAAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: LKHLGMFPECIG*FLRCLKLSQEY Trigger: ATACTCTTGGGACAATTTCAAACACCTTAAGAACAAGCCAATACACTCTGGGAACATACCCAAATGCTTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 72 bp | TTCCTCCTCTTCCAACTGTCCCACAAAAGTTTCCATTaGCTCCGAAGTTATGTTGATTTGGTCCAAAATTAT | + |
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Preference number: 6 (lower is better) Translates to: FLLFQLSHKSFH*LRSYVDLVQNY Trigger: ATAATTTTGGACCAAATCAACATAACTTCGGAGCAAATGGAAACTTTTGTGGGACAGTTGGAAGAGGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 90 bp | ATAAGCCCCATAACTATAGAGGACGAAATAATCACCATTAGAGTCTaGGAAACCTGGAAGTGTATTGCAGACATTCAGAAAATTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: ISPITIEDEIITIRV*ETWKCIADIQKIAI Trigger: TATGGCAATTTTCTGAATGTCTGCAATACACTTCCAGGTTTCCAAGACTCTAATGGTGATTATTTCGTCCTCTATAGTTATGGGGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS TCA 72 bp | GGAATAAATTCGCTGGTAATCATTACCAAGGAGAGTTaGCTGGCTTATTTGAACATTGTAATTAGGTGCATA | + |
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Preference number: 6 (lower is better) Translates to: GINSLVIITKES*LAYLNIVIRCI Trigger: TATGCACCTAATTACAATGTTCAAATAAGCCAGTCAACTCTCCTTGGTAATGATTACCAGCGAATTTATTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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| CDS CAA 72 bp | ATAACTATAGAGGACGAAATAATCACCATTAGAGTCTaGGAAACCTGGAAGTGTATTGCAGACATTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ITIEDEIITIRV*ETWKCIADIQK Trigger: TTTCTGAATGTCTGCAATACACTTCCAGGTTTCCAAGACTCTAATGGTGATTATTTCGTCCTCTATAGTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179408.3 |
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