Pregenerated sensors for RBM28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029701Ensembl transcript IDs: ENSMUST00000007993.16, ENSMUST00000164563.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTTCTCACCAGAAAGCTCCCAGTCCCTGGGGGAAGGAGCTCTGTaGAATTCATCTGGGCCATCCATGGTCAGGCTGGGGTCTAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: AFSPESSQSLGEGAL*NSSGPSMVRLGSSL Trigger: CAGGCTAGACCCCAGCCTGACCATGGATGGCCCAGATGAATTGCACAGAGCTCCTTCCCCCAGGGACTGGGAGCTTTCTGGTGAGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 90 bp | AGGAGACGCTCTCCAGGCCAAGGGGGCAGACAGGAGGCTCTGCGGTaGCAGAATCTATCAGTGTACTCCACATCTTGTGTCAGAGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: RRRSPGQGGRQEALR*QNLSVYSTSCVRVV Trigger: GACAACTCTGACACAAGATGTGGAGTACACTGATAGATTCTGCCACCGCAGAGCCTCCTGTCTGCCCCCTTGGCCTGGAGAGCGTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR GCA 90 bp | GGAGGGACGTTACTTACTGGCTTGCTTCCCCTGCCTTGCTCAGCTTaGTTTCTTATAGAACCCAGGACTACCAGCCCAGGGATGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: GGTLLTGLLPLPCSA*FLIEPRTTSPGMAP Trigger: TGGTGCCATCCCTGGGCTGGTAGTCCTGGGTTCTATAAGAAAGCAAGCTGAGCAAGGCAGGGGAAGCAAGCCAGTAAGTAACGTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR TCA 90 bp | CAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTaGAAGACACGGCTTTTGTACAGTCTGCAGGTGCCATCAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: QSPRKWVSSGICFPQ*KTRLLYSLQVPSAV Trigger: GACAGCTGATGGCACCTGCAGACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| 3UTR TCA 90 bp | ATCTTGTGTCAGAGTTGTCCAGCACGGGGGTTGGTTTGCCTCCAGTaGGCTTCATCTTTCACAACAGCCCACTCTTCACACCACCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ILCQSCPARGLVCLQ*ASSFTTAHSSHHQN Trigger: ATTCTGGTGGTGTGAAGAGTGGGCTGTTGTGAAAGATGAAGCTCACTGGAGGCAAACCAACCCCCGTGCTGGACAACTCTGACACAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 90 bp | TCCTTCACTACCTCTAGGCCATCAAGGGCTTTCTGGAGCACTCGCTaGTTTTCTCAAGACAATGCCATAAAACAGCTCTCTGCTTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SFTTSRPSRAFWSTR*FSQDNAIKQLSAWL Trigger: GAGCCAAGCAGAGAGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCCCTTGATGGCCTAGAGGTAGTGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 90 bp | TCCATGATTTCTTCCTTCACTACCTCTAGGCCATCAAGGGCTTTCTaGAGCACTCGCTGGTTTTCTCAAGACAATGCCATAAAACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: SMISSFTTSRPSRAF*STRWFSQDNAIKQL Trigger: GAGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCCCTTGATGGCCTAGAGGTAGTGAAGGAAGAAATCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCCGCTTGATCTGCTTCCCTCAGTaGAAGACACGGCTTTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PRTTSPGMAPPTRGPPRLICFPQ*KTRLLY Trigger: GTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGAT...CAAGCGGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGTCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGTCCAGTCAGGAGTCAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATTTCTCAGGTGCCACTTaGTGCCAGGCCCATGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GESSQESGWRGKRSPISDFSGAT*CQAHGL Trigger: AAGGCCATGGGCCTGGCAGCAAGTGGCACCTGAGAA...ATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTGACTCCTGACTGGACTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR GCA 90 bp | ACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCCGCTTGATCACTATGATGATTAGTGAGTaGCAAGAGAAAACAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: TTSPGMAPPTRGPPRLITMMISE*QEKTNR Trigger: CCTGTTTGTTTTCTCTTGGCACTCACTAATCATCAT...AGTGATCAAGCGGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAGAAAGTAGGGGAAGGAGCTCTGTaGAATTCATCTGGGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: FLQTLTLRPPAFFRQEKVGEGAL*NSSGPS Trigger: GGATGGCCCAGATGAATTGCACAGAGCTCCTTCCCC...TACTTTCTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CAA 90 bp | AGCTTCATCTTTCACAACAGCCCACTCTTCACACCACCAGAATTCTaGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SFIFHNSPLFTPPEF*QTLTLRPPAFFRQE Trigger: CTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAATTCTGGTGGTGTGAAGAGTGGGCTGTTGTGAAAGATGAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACGGCTTTTGTACAGTCTaGAGGTGCCATCAGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TVPKKVGIIWDLLPSVKDGFCTV*RCHQLS Trigger: TGACAGCTGATGGCACCTGCAGACTGTACAAAAGCC...GTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGTCCAGTCAGGAGTCAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATGTTTCCCAGTGTCTCTaGCATTCAGAGACTACTTTA | + |
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Preference number: 2 (lower is better) Translates to: GESSQESGWRGKRSPISDVSQCL*HSETTL Trigger: TAAAGTAGTCTCTGAATGTCAGAGACACTGGGAAAC...ATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTGACTCCTGACTGGACTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR GCA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATGTACAGTCTGCAGGTaGCATCAGCTGTCAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: GERTMNVHNLQSPRKWVSCTVCR*HQLSNH Trigger: ATGGTTTGACAGCTGATGGCACCTGCAGACTGTACA...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| 3UTR CAA 90 bp | CAAGACAATGCCATAAAACAGCTCTCTGCTTGGCTCAGCGATATTTaGGGACAGCATACTTTAAATCAGCACATTAGGTCAGGGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: QDNAIKQLSAWLSDI*GQHTLNQHIRSGTQ Trigger: TTGGGTCCCTGACCTAATGTGCTGATTTAAAGTATGCTGTCCCAAAATATCGCTGAGCCAAGCAGAGAGCTGTTTTATGGCATTGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAGAAAGTAACTGCATATTCAACATaGCTAGATAAGAGTTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: FLQTLTLRPPAFFRQEKVTAYST*LDKSLG Trigger: GCCTAAACTCTTATCTAGTCATGTTGAATATGCAGT...TACTTTCTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATACTGAAGGAAACACCAGAAACTCAGCACTGTGATTaGGTAAGTTATAAAAACTCC | + |
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Preference number: 2 (lower is better) Translates to: QVGEVRGALFQILKETPETQHCD*VSYKNS Trigger: GGAGTTTTTATAACTTACCCAATCACAGTGCTGAGT...TTCTGGTGTTTCCTTCAGTATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR GCA 72 bp | CCCTCCGGGGGCAGACCCTTCTCAGGTGCCACTTGCTaGCAGGCCCATGGCCTTCAGTCGTTTCCCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: PSGGRPFSGATC*QAHGLQSFPSV Trigger: GACACTGGGAAACGACTGAAGGCCATGGGCCTGGCAGCAAGTGGCACCTGAGAAGGGTCTGCCCCCGGAGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR GCA 72 bp | TTCCCCTCCGGGGGCAGACCCTTCTCAGGTGCCACTTaGTGCCAGGCCCATGGCCTTCAGTCGTTTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: FPSGGRPFSGAT*CQAHGLQSFPS Trigger: ACTGGGAAACGACTGAAGGCCATGGGCCTGGCAGCAAGTGGCACCTGAGAAGGGTCTGCCCCCGGAGGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR GCA 72 bp | CATCTGGGCCATCCATGGTCAGGCTGGGGTCTAGCCTaGAATCTTATTCCCAGCCAGCCATTCCCCTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: HLGHPWSGWGLA*NLIPSQPFPSG Trigger: CCCGGAGGGGAATGGCTGGCTGGGAATAAGATTGCAGGCTAGACCCCAGCCTGACCATGGATGGCCCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 72 bp | TCTCCAGGCCAAGGGGGCAGACAGGAGGCTCTGCGGTaGCAGAATCTATCAGTGTACTCCACATCTTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SPGQGGRQEALR*QNLSVYSTSCV Trigger: GACACAAGATGTGGAGTACACTGATAGATTCTGCCACCGCAGAGCCTCCTGTCTGCCCCCTTGGCCTGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 72 bp | CTCTGTGCAATTCATCTGGGCCATCCATGGTCAGGCTaGGGTCTAGCCTGCAATCTTATTCCCAGCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LCAIHLGHPWSG*GLACNLIPSQP Trigger: TGGCTGGCTGGGAATAAGATTGCAGGCTAGACCCCAGCCTGACCATGGATGGCCCAGATGAATTGCACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 72 bp | AGTTCGCTGCTTTCTCACCAGAAAGCTCCCAGTCCCTaGGGGAAGGAGCTCTGTGCAATTCATCTGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: SSLLSHQKAPSP*GKELCAIHLGH Trigger: ATGGCCCAGATGAATTGCACAGAGCTCCTTCCCCCAGGGACTGGGAGCTTTCTGGTGAGAAAGCAGCGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR TCA 72 bp | CAGAGTTGTCCAGCACGGGGGTTGGTTTGCCTCCAGTaGGCTTCATCTTTCACAACAGCCCACTCTTCACAC | + |
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Preference number: 3 (lower is better) Translates to: QSCPARGLVCLQ*ASSFTTAHSSH Trigger: GTGTGAAGAGTGGGCTGTTGTGAAAGATGAAGCTCACTGGAGGCAAACCAACCCCCGTGCTGGACAACTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR TCA 72 bp | AGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTaGAAGACACGGCTTTTGTACAGTCTGCAGGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: RKWVSSGICFPQ*KTRLLYSLQVP Trigger: TGGCACCTGCAGACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| 3UTR GCA 72 bp | GCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTCTaGAGGTGCCATCAGCTGTCAAACCATTTGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ASLSERHGFCTV*RCHQLSNHLLL Trigger: GAGAAGCAAATGGTTTGACAGCTGATGGCACCTGCAGACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| 3UTR CCA 72 bp | ACAAACAGGGTCGGAGAGTCCAGTCAGGAGTCAGGTTaGAGAGGTAAGAGGAGCCCTATTTCAGATACTGAA | + |
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Preference number: 3 (lower is better) Translates to: TNRVGESSQESG*RGKRSPISDTE Trigger: TTCAGTATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTGACTCCTGACTGGACTCTCCGACCCTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR GCA 72 bp | GGCTTTCTGGAGCACTCGCTGGTTTTCTCAAGACAATaGCATAAAACAGCTCTCTGCTTGGCTCAGCGATAT | + |
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Preference number: 3 (lower is better) Translates to: GFLEHSLVFSRQ*HKTALCLAQRY Trigger: ATATCGCTGAGCCAAGCAGAGAGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 72 bp | ACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTaGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: TQPTVPKKVGII*DLLPSVKDTAF Trigger: AAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| 3UTR CCA 72 bp | ACCTCTAGGCCATCAAGGGCTTTCTGGAGCACTCGCTaGTTTTCTCAAGACAATGCCATAAAACAGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TSRPSRAFWSTR*FSQDNAIKQLS Trigger: AGAGAGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCCCTTGATGGCCTAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 72 bp | TCTTCCTTCACTACCTCTAGGCCATCAAGGGCTTTCTaGAGCACTCGCTGGTTTTCTCAAGACAATGCCATA | + |
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Preference number: 3 (lower is better) Translates to: SSFTTSRPSRAF*STRWFSQDNAI Trigger: TATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCCCTTGATGGCCTAGAGGTAGTGAAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR TCA 72 bp | CCAGGCCCATGGCCTTCAGTCGTTTCCCAGTGTCTCTaGCATTCAGAGACTACTTTAGTAAGCATTTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: PGPWPSVVSQCL*HSETTLVSIFS Trigger: AGAGAAAATGCTTACTAAAGTAGTCTCTGAATGTCAGAGACACTGGGAAACGACTGAAGGCCATGGGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR TCA 72 bp | GGAAACACCAGAAAAGCTGAGGGTTCAGTAGAGATCTaGGAAACAAATGATCCTAAGGAGACGCTCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GNTRKAEGSVEI*ETNDPKETLSR Trigger: CCTGGAGAGCGTCTCCTTAGGATCATTTGTTTCTCAGATCTCTACTGAACCCTCAGCTTTTCTGGTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CCA 72 bp | TCACTAATTGAGAAAATGACTTACAGCTGGATCTCATaGAGCCATTTCCTCAAGGGAGGCTCCTTTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SLIEKMTYSWIS*SHFLKGGSFLC Trigger: ACAGAGAAAGGAGCCTCCCTTGAGGAAATGGCTCCATGAGATCCAGCTGTAAGTCATTTTCTCAATTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| 3UTR CAA 72 bp | ATTCCCCTCCGGGGGCAGACCCTTCTCAGGTGCCACTaGCTGCCAGGCCCATGGCCTTCAGTCGTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IPLRGQTLLRCH*LPGPWPSVVSQ Trigger: CTGGGAAACGACTGAAGGCCATGGGCCTGGCAGCAAGTGGCACCTGAGAAGGGTCTGCCCCCGGAGGGGAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | CCCAGGACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCCGCTTGTGCTCTGTGTCTGGATaGAAGACAACTCGGACATAC | + |
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Preference number: 4 (lower is better) Translates to: PRTTSPGMAPPTRGPPRLCSVSG*KTTRTY Trigger: GTATGTCCGAGTTGTCTTGCATCCAGACACAGAGCA...CAAGCGGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGTCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | AGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACCTTCCAGCTGATCGCTaGGAGCCGAGGGCGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPQESGYHLGSASLSERHLPADR*EPRAGD Trigger: GTCTCCCGCCCTCGGCTCGCAGCGATCAGCTGGAAG...GTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR TCA 90 bp | CACGGCTTTTGTACAGTCTGCAGGTGCCATCAGCTGTCAAACCATTTGCTTCTCTTTGGGGCCTCGGTGTaGAGGGAGTGCCAGGACCTT | + |
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Preference number: 4 (lower is better) Translates to: HGFCTVCRCHQLSNHLLLFGASV*RECQDL Trigger: AAGGTCCTGGCACTCCCTTCACACCGAGGCCCCAAA...GAGAAGCAAATGGTTTGACAGCTGATGGCACCTGCAGACTGTACAAAAGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| CDS-3UTR GCA 90 bp | ACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCCGCTTGATCACTCTGAGTCATGAATTGTaGGAATGCACAACCTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: TTSPGMAPPTRGPPRLITLSHEL*ECTTFR Trigger: TCTAAAGGTTGTGCATTCGCACAATTCATGACTCAG...AGTGATCAAGCGGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | GGAGAGTCCAGTCAGGAGTCAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATGCGTTTGGCCATATCTaGGGCACTCACACCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GESSQESGWRGKRSPISDAFGHI*GTHTLS Trigger: GCTGAGGGTGTGAGTGCCGCAGATATGGCCAAACGC...ATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTGACTCCTGACTGGACTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR TCA 90 bp | AGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACCCGGACCCACCTGACTaGACAGCTCTTCCAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SPQESGYHLGSASLSERHPDPPD*TALPAD Trigger: ATCAGCTGGAAGAGCTGTTCAGTCAGGTGGGTCCGG...GTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | GGAGAGTCCAGTCAGGAGTCAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATCCTCATCATAGGAGCTaGCTCCTTCCTCCAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GESSQESGWRGKRSPISDPHHRS*LLPPGH Trigger: GTGACCTGGAGGAAGGAGGCAGCTCCTATGATGAGG...ATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTGACTCCTGACTGGACTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | ACATCTTGTGTCAGAGTTGTCCAGCACGGGGGTTGGTTTGCCTCCAGTGAGCTTCTTTGTCTGAAGCTTTaGTGCCTCATCCCGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TSCVRVVQHGGWFASSELLCLKL*CLIPGH Trigger: GTGACCCGGGATGAGGCAGCAAAGCTTCAGACAAAG...AAGCTCACTGGAGGCAAACCAACCCCCGTGCTGGACAACTCTGACACAAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CCA 90 bp | TGGAGCCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTGCTCCACTTCAGCCTTaGTCTGGAAGCCTGACCACG | + |
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Preference number: 4 (lower is better) Translates to: WSHFLKGGSFLCDNSSLCAPLQP*SGSLTT Trigger: CGTGGTCAGGCTTCCAGACCAAGGCTGAAGTGGAGC...ACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCCCTTGAGGAAATGGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CCA 90 bp | CTCAGTGAAAGACACGGCTTTTGTACAGTCTGCAGGTGCCATCAGCTGTCAAACGCTCCACTTCAGCCTTaGTCTGGAAGCCTGACCACG | + |
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Preference number: 4 (lower is better) Translates to: LSERHGFCTVCRCHQLSNAPLQP*SGSLTT Trigger: CGTGGTCAGGCTTCCAGACCAAGGCTGAAGTGGAGC...GTTTGACAGCTGATGGCACCTGCAGACTGTACAAAAGCCGTGTCTTTCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| CDS-3UTR GCA 90 bp | GGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTCAGTCGTCTTCCTCGATaGTTTCCTCGGGAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GYHLGSASLSERHGFCTVSRLPR*FPRELL Trigger: GAGCAGCTCCCGAGGAAAGCATCGAGGAAGACGACT...GACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | ACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAGCCTTTGGGAGATTGTaGAGGCAAAGCCTGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TYSPQESGYHLGSASLSEAFGRL*RQSLVC Trigger: GCAGACCAGGCTTTGCCTGCACAATCTCCCAAAGGC...TTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR GCA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCACCGGCTTTCCCTTTCTaGTCTCCAGGCGCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GERTMNVHNLQSPRKWVSPAFPF*SPGALL Trigger: GAGTAAGGCGCCTGGAGAGCAGAAAGGGAAAGCCGG...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTGCTCTTCTTTACACCTaGGGCAGAAGCATGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSHFLKGGSFLCDNSSLCALLYT*GRSMLG Trigger: GCCCAGCATGCTTCTGCCCCAGGTGTAAAGAAGAGC...ACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCCCTTGAGGAAATGGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | GTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGGTTCAACCAGCTGGTTaGAGCGGGCTTCTGCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VGIIWDLLPSVKDTAFVQVQPAG*SGLLPY Trigger: ATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAAC...CTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR TCA 90 bp | ACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAGTTCAACCAGCTGGTTaGAGCGGGCTTCTGCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TYSPQESGYHLGSASLSEVQPAG*SGLLPY Trigger: ATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAAC...TTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGTCAGAGTTGTCCAGCACGGGGGTTGGTTTGCCTCCAGTGAGCTTCATCGCACAACCTTTAGAATaGTCTGTGTCTGGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSELSSTGVGLPPVSFIAQPLE*SVSGCK Trigger: CTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGC...GATGAAGCTCACTGGAGGCAAACCAACCCCCGTGCTGGACAACTCTGACACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATGTCTGAAGCTTTGCTaGCTCATCCCGGGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GERTMNVHNLQSPRKWVSCLKLC*LIPGHS Trigger: GCTGTGACCCGGGATGAGGCAGCAAAGCTTCAGACA...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | CAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATACTGAAGGAAACACCAGAACCGGCTTTCCCTTTCTaGTCTCCAGGCGCCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: QVGEVRGALFQILKETPEPAFPF*SPGALL Trigger: GAGTAAGGCGCCTGGAGAGCAGAAAGGGAAAGCCGG...TTCTGGTGTTTCCTTCAGTATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | TATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTCTGCGGATCAAGCCTTCTCTaGCCAGATAGAGGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YHLGSASLSERHGFCTVCGSSLL*PDRGSG Trigger: CCCGGAACCTCTATCTGGCCAGAGAAGGCTTGATCC...GCAGACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTTTCTGGAGCACTCGCTGGTTTTCTCAAGACAATGCCATAAAACAGCTGCCCATCTGGGGCTTTaGCTTCCTAGAAGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGFLEHSLVFSRQCHKTAAHLGL*LPRRQG Trigger: TCCCTGCCTTCTAGGAAGCCAAAGCCCCAGATGGGC...AGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACAACATAAAACCATTTGGGGCCTCGGTGTaGAGGGAGTGCCAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSFLCDNSSLCQVDNIKPFGASV*RECQDL Trigger: AAGGTCCTGGCACTCCCTTCACACCGAGGCCCCAAA...TGGTTTTATGTTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | ACATCTTGTGTCAGAGTTGTCCAGCACGGGGGTTGGTTTGCCTCCAGTGAGCTTTTTGTATTTGTCCTTTaGCACAGCCCAATCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSCVRVVQHGGWFASSELFVFVL*HSPIHS Trigger: GCTGTGGATTGGGCTGTGGCAAAGGACAAATACAAA...AAGCTCACTGGAGGCAAACCAACCCCCGTGCTGGACAACTCTGACACAAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | CAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGGTTGAAGCGGGCTTCTaGCTTATTCTCCTTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPTVPKKVGIIWDLLPSVVEAGF*LILLSL Trigger: AAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAAC...CACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGTCCAGTCAGGAGTCAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATGTTCCGGGTTCCAGTTaGCTTCTTCACCTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GESSQESGWRGKRSPISDVPGSS*LLHLLC Trigger: ACAAAGAAGGTGAAGAAGCCAACTGGAACCCGGAAC...ATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTGACTCCTGACTGGACTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | ACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACTATTGTTCAACCAGCTaGTTGAAGCGGGCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVPKKVGIIWDLLPSVKDYCSTS*LKRASA Trigger: GGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATA...GTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR TCA 90 bp | CAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGTCATATTCGCGCCTTTaGGAGCTTTTCCTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPTVPKKVGIIWDLLPSVSYSRL*ELFLLQ Trigger: TTGAAGCAGGAAAAGCTCTCAAAGGCGCGAATATGA...CACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAACAGCAGTTCTTCTTACCTaGTTCCTTAGGCTTCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCSSPKEVRTGTQAGQETAVLLT*FLRLPV Trigger: GACCGGAAGCCTAAGGAATCAGGTAAGAAGAACTGC...TGTTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | CTAAATGTTTCCATGATTTCTTCCTTCACTACCTCTAGGCCATCAAGGGCTTTCCGGGAGCTGCTCTCTTaGCTGCTCTCTTGTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LNVSMISSFTTSRPSRAFRELLS*LLSCAH Trigger: GTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCG...GAAAGCCCTTGATGGCCTAGAGGTAGTGAAGGAAGAAATCATGGAAACATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | GGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTCTCTTTTTGCTCCTTTTaGGGCTTACTGGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYHLGSASLSERHGFCTVSFCSF*GLLVTG Trigger: GCCTGTGACCAGTAAGCCCCAAAAGGAGCAAAAAGA...GACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTATTGTTCAACCAGCTaGTTGAAGCGGGCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QESGYHLGSASLSERHGFYCSTS*LKRASA Trigger: GGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATA...AAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR GCA 90 bp | ATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCCCTGGGGCAGAAGCATaGTGGGCATCTTTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: MNVHNLQSPRKWVSSGICPGAEA*WASLYL Trigger: CAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGG...GCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTCTGAGGGCATGCTCATaGTTTTGGAACTCTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESGYHLGSASLSERHGFCLRACS*FWNSAK Trigger: CTTTGCAGAGTTCCAAAAGCATGAGCATGCCCTCAG...ACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCAAGAATGCTCTGTGTCTaGATGCAAGACAACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GERTMNVHNLQSPRKWVSRMLCV*MQDNSD Trigger: GTCCGAGTTGTCTTGCATCCAGACACAGAGCATTCT...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACAACATAAAACCAGCCAAAGCCTCGGCATaGCTTACTCCCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFLCDNSSLCQVDNIKPAKASA*LTPFLC Trigger: ACAGAGAAAGGGAGTAAGGCATGCCGAGGCTTTGGC...TGGTTTTATGTTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | CAGGTTGGAGAGGTAAGAGGAGCCCTATTTCAGATACTGAAGGAAACACCAGAATTGACTGCTCTCTTGTaGACACTCACAGGAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVGEVRGALFQILKETPELTALL*TLTGEA Trigger: AGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAA...TTCTGGTGTTTCCTTCAGTATCTGAAATAGGGCTCCTCTTACCTCTCCAACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | CATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGGTTGAAGCGGGCTTCTaGCTTATTCTCCTTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HECTQPTVPKKVGIIWDLVEAGF*LILLSL Trigger: AAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAAC...CAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR CCA 90 bp | GGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTCACGCATCTTTCCATCTaGCTTCTTTGGGATATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GYHLGSASLSERHGFCTVTHLSI*LLWDIH Trigger: GTGAATATCCCAAAGAAGCCAGATGGAAAGATGCGT...GACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | ACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCATGGTTCTTGAGTTTCTaGTGTTTCAGTAGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQPTVPKKVGIIWDLLPSWFLSF*CFSSSN Trigger: GTTTGAGCTACTGAAACATCAGAAACTCAAGAACCA...TGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | TTCTTGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAGAAAGTACTTGTTCTTCCACCCTaGAGTTCTTCTTACCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FLQTLTLRPPAFFRQEKVLVLPP*SSSYLI Trigger: AATCAGGTAAGAAGAACTGCAGGGTGGAAGAACAAG...TACTTTCTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR GCA 90 bp | ACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAAAGACATTTCTGAGCTaGTTCCTGAGTCATGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: TQPTVPKKVGIIWDLLPSKTFLS*FLSHEL Trigger: CAATTCATGACTCAGGAAGCAGCTCAGAAATGTCTT...TGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | ATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCGAACATCTTCCAGCATaGAGAAAGTCACGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MNVHNLQSPRKWVSSGICEHLPA*RKSRSQ Trigger: TTGGCTACGTGACTTTCTCCATGCTGGAAGATGTTC...GCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | TTCTTGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAGAAAGTACTTTGGCTCCTTCTTTaGGGACTCTGCATTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FLQTLTLRPPAFFRQEKVLWLLL*GLCIFI Trigger: AATGAAAATGCAGAGTCCCCAAAGAAGGAGCCAAAG...TACTTTCTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| 3UTR CAA 72 bp | CTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGCTaGTGTCAAGTTGACAACATAAAACCAGCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LKGGSFLCDNSS*CQVDNIKPAST Trigger: TGTACTGGCTGGTTTTATGTTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCCCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACAACATAAAACCATCTTTTTGCTCCTTTTaGGGCTTACTGGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFLCDNSSLCQVDNIKPSFCSF*GLLVTG Trigger: GCCTGTGACCAGTAAGCCCCAAAAGGAGCAAAAAGA...TGGTTTTATGTTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTCTCAGCCTTTTCTACAGACTACCACTGCTCCTTTTCCTTTGTTATTGACATCTTCATCCTCTTaGTCTTCAGCGCTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSQPFLQTTTAPFPLLLTSSSS*SSALLS Trigger: TGAGAGCAGCGCTGAAGATCAAGAGGATGAAGATGT...CAATAACAAAGGAAAAGGAGCAGTGGTAGTCTGTAGAAAAGGCTGAGAACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | CTAAATGTTTCCATGATTTCTTCCTTCACTACCTCTAGGCCATCAAGGGCTTTCAAGAGAACTCCACTATaGGTCTCTTTTGGGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNVSMISSFTTSRPSRAFKRTPL*VSFGTQ Trigger: TTGGGTCCCAAAAGAGACCCATAGTGGAGTTCTCTT...GAAAGCCCTTGATGGCCTAGAGGTAGTGAAGGAAGAAATCATGGAAACATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| 3UTR CAA 72 bp | GCCATAAAACAGCTCTCTGCTTGGCTCAGCGATATTTaGGGACAGCATACTTTAAATCAGCACATTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AIKQLSAWLSDI*GQHTLNQHIRS Trigger: TGACCTAATGTGCTGATTTAAAGTATGCTGTCCCAAAATATCGCTGAGCCAAGCAGAGAGCTGTTTTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR TCA 90 bp | CTAAATGTTTCCATGATTTCTTCCTTCACTACCTCTAGGCCATCAAGGGCTTTCAGGAGAAGCTATTGTTaGTTCTCTTTCTTCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNVSMISSFTTSRPSRAFRRSYC*FSFFFV Trigger: GACGAAGAAGAAAGAGAATCAACAATAGCTTCTCCT...GAAAGCCCTTGATGGCCTAGAGGTAGTGAAGGAAGAAATCATGGAAACATTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | ATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTTTTCTCGTTTCCTTaGACTTGTTCCTCAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MNVHNLQSPRKWVSSGICFFSFP*TCSSVF Trigger: AAAAACTGAGGAACAAGTCCAAGGAAACGAGAAAAA...GCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CCA 90 bp | CAACATAAAACCAGCCAGTACAGTCTAAATGTTTCCATGATTTCTTCCTTCACTTGTGCAGGCAAAGCCTaGTCTGCGAGACAAAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QHKTSQYSLNVSMISSFTCAGKA*SARQRY Trigger: ATATCTTTGTCTCGCAGACCAGGCTTTGCCTGCACA...AGTGAAGGAAGAAATCATGGAAACATTTAGACTGTACTGGCTGGTTTTATGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CCCAGGACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCCGCTTGGGCAGGGACTTCACTTaGCCTTTGTCCCGCAGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRTTSPGMAPPTRGPPRLGRDFT*PLSRSL Trigger: TAGGCTGCGGGACAAAGGCAAAGTGAAGTCCCTGCC...CAAGCGGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGTCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS TCA 90 bp | CTTTCTCTGTCACCACGAAGCACTGCTTCACCGGACCCACCTGACTaGACAGCTCTTCCAGCTGATCGCTGCGAGCCGAGGGCGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSPRSTASPDPPD*TALPADRCEPRAGD Trigger: GTCTCCCGCCCTCGGCTCGCAGCGATCAGCTGGAAGAGCTGTTCAGTCAGGTGGGTCCGGTGAAGCAGTGCTTCGTGGTGACAGAGAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | GACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCCGCTTGATCACAAGATCTCTGGGTTGTaGTTGAAGTGGCGGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DYQPRDGTTHKGPSPLDHKISGL*LKWRRA Trigger: AGCCCTCCGCCACTTCAACAACAACCCAGAGATCTT...GTGATCAAGCGGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 90 bp | CCACCTGCTCCACTTCAGCCTTGGTCTGGAAGCCTGACCACGAGGTaGAGCCGGCTTTCCCTTTCTGCTCTCCAGGCGCCTTACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PPAPLQPWSGSLTTR*SRLSLSALQAPYSD Trigger: ATCAGAGTAAGGCGCCTGGAGAGCAGAAAGGGAAAGCCGGCTCCACCTCGTGGTCAGGCTTCCAGACCAAGGCTGAAGTGGAGCAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS CCA 90 bp | GGCGCCTGCACGGAAGACGCTAACTGCTGCTTCTTTTGCTTCCGCTaGCCCATCTGGGGCTTTGGCTTCCTAGAAGGCAGGGACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GACTEDANCCFFCFR*PIWGFGFLEGRDFT Trigger: AGTGAAGTCCCTGCCTTCTAGGAAGCCAAAGCCCCAGATGGGCCAGCGGAAGCAAAAGAAGCAGCAGTTAGCGTCTTCCGTGCAGGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 90 bp | GAAGTGGCGGAGGGCTCTGAGGGCATGCTCATGCTTTTGGAACTCTaGAAAGGCATAGCCCAGGGACTGACCCTTCATTTTCCCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EVAEGSEGMLMLLEL*KGIAQGLTLHFPMN Trigger: GTTCATGGGAAAATGAAGGGTCAGTCCCTGGGCTATGCCTTTGCAGAGTTCCAAAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 90 bp | GCGGATCAAGCCTTCTCTGGCCAGATAGAGGTTCCGGGTTCCAGTTaGCTTCTTCACCTTCTTTGTCTGAAGCTTTGCTGCCTCATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ADQAFSGQIEVPGSS*LLHLLCLKLCCLIP Trigger: CGGGATGAGGCAGCAAAGCTTCAGACAAAGAAGGTGAAGAAGCCAACTGGAACCCGGAACCTCTATCTGGCCAGAGAAGGCTTGATCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 90 bp | ACGGAAGACGCTAACTGCTGCTTCTTTTGCTTCCGCTGGCCCATCTaGGGCTTTGGCTTCCTAGAAGGCAGGGACTTCACTTTGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEDANCCFFCFRWPI*GFGFLEGRDFTLPL Trigger: CAAAGGCAAAGTGAAGTCCCTGCCTTCTAGGAAGCCAAAGCCCCAGATGGGCCAGCGGAAGCAAAAGAAGCAGCAGTTAGCGTCTTCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 90 bp | ACTGTCCTCGTAGGAGTCGTCTTCCTCGATGCTTTCCTCGGGAGCTaGTCTCTTGACTGCTCTCTTGTGCACACTCACAGGAGAAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TVLVGVVFLDAFLGS*SLDCSLVHTHRRSY Trigger: ATAGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAGCATCGAGGAAGACGACTCCTACGAGGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | GTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTGCTCCACTTCAGCCTaGGTCTGGAAGCCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGIIWDLLPSVKDTAFVQCSTSA*VWKPDH Trigger: GTGGTCAGGCTTCCAGACCAAGGCTGAAGTGGAGCA...CTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR CAA 90 bp | TATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGTCTGCTCCCGCAGCCTAATTTaGGGGCCTCGGTGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YHLGSASLSERHGFCTVCSRSLI*GPRCEG Trigger: CCCTTCACACCGAGGCCCCAAAATTAGGCTGCGGGA...GCAGACTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 90 bp | ATGGGTCTCTTTTGGGACCCAAAGATCTCTGGGTTGTTGTTGAAGTaGCGGAGGGCTCTGAGGGCATGCTCATGCTTTTGGAACTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MGLFWDPKISGLLLK*RRALRACSCFWNSA Trigger: TGCAGAGTTCCAAAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAAGAGACCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CCAGAATTCTTGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAGTCTTTGTCTGAAGCTTaGCTGCCTCATCCCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEFLQTLTLRPPAFFRQESLSEA*LPHPGS Trigger: TGACCCGGGATGAGGCAGCAAAGCTTCAGACAAAGA...CTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAATTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTACAGCCTTTGGGAGATaGTGCAGGCAAAGCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WSHFLKGGSFLCDNSSLCTAFGR*CRQSLV Trigger: GACCAGGCTTTGCCTGCACAATCTCCCAAAGGCTGT...ACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCCCTTGAGGAAATGGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 90 bp | TACACCTGGGGCAGAAGCATGCTGGGCATCTTTGTATTTGTCCTTTaGCACAGCCCAATCCACAGCCACAGTCCGTCCTTTTATCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YTWGRSMLGIFVFVL*HSPIHSHSPSFYLL Trigger: AAGGAGATAAAAGGACGGACTGTGGCTGTGGATTGGGCTGTGGCAAAGGACAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 90 bp | CTTCTCTTCATGAGGGGCGCTCCTTTAGAAGGGCCCAGCAACTTCTaGTTATATTGTTCAACCAGCTGGTTGAAGCGGGCTTCTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LLFMRGAPLEGPSNF*LYCSTSWLKRASAL Trigger: TAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTGCTGGGCCCTTCTAAAGGAGCGCCCCTCATGAAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCAGACCCTGACTCTGAGACCCCCAGCTTTCTTTAGGCAAGAGAAAGTATCGGGAGCTGCTCTCTaGACTGCTCTCTTGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FLQTLTLRPPAFFRQEKVSGAAL*TALLCT Trigger: TGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGA...TACTTTCTCTTGCCTAAAGAAAGCTGGGGGTCTCAGAGTCAGGGTCTGCAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCAATCTCTGGGTTGTTGTaGAAGTGGCGGAGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GERTMNVHNLQSPRKWVSISGLL*KWRRAL Trigger: CAGAGCCCTCCGCCACTTCAACAACAACCCAGAGAT...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGAGCACTCGCTGGTTTTCTCAAGACAATGCCATAAAACAGCTCTCTGCTGCTCCACTTCAGCCTaGGTCTGGAAGCCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLEHSLVFSRQCHKTALCCSTSA*VWKPDH Trigger: GTGGTCAGGCTTCCAGACCAAGGCTGAAGTGGAGCA...GCAGAGAGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATTTAGGCGCCTAATTTaGGGGCCTCGGTGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GERTMNVHNLQSPRKWVSFRRLI*GPRCEG Trigger: CCCTTCACACCGAGGCCCCAAAATTAGGCGCCTAAA...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
||
| CDS GCA 90 bp | TTTTCTCTGAGACTGGAACATCTTCATCCTCTTGATCTTCAGCGCTaGTCTCACTGTCCACTGTCCCCTCATCATAGGAGCTGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSLRLEHLHPLDLQR*SHCPLSPHHRSCLL Trigger: AAGGAGGCAGCTCCTATGATGAGGGGACAGTGGACAGTGAGAGCAGCGCTGAAGATCAAGAGGATGAAGATGTTCCAGTCTCAGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | ACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACCTCTTGACTGCTCTCTaGTGCACACTCACAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVPKKVGIIWDLLPSVKDLLTAL*CTLTGE Trigger: TTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAG...GTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | AATGCCATAAAACAGCTCTCTGCTTGGCTCAGCGATATTTTGGGACAGCATACTTCAAACCGCTCGCGTTaGGCCATATCTGCGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: NAIKQLSAWLSDILGQHTSNRSR*AISAAL Trigger: GAGTGCCGCAGATATGGCCAAACGCGAGCGGTTTGA...AGTATGCTGTCCCAAAATATCGCTGAGCCAAGCAGAGAGCTGTTTTATGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 90 bp | AGCAGCTTCCTTAGCTGTTTATCGTCCACAGCCTTTGGGAGATTGTaGAGGCAAAGCCTGGTCTGCGAGACAAAGATATTCTGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFLSCLSSTAFGRL*RQSLVCETKIFWFL Trigger: CAAGAACCAGAATATCTTTGTCTCGCAGACCAGGCTTTGCCTGCACAATCTCCCAAAGGCTGTGGACGATAAACAGCTAAGGAAGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | ACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAAACATCTTCATCCTCTaGATCTTCAGCGCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQPTVPKKVGIIWDLLPSNIFIL*IFSAAL Trigger: GAGAGCAGCGCTGAAGATCAAGAGGATGAAGATGTT...TGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGGCATGCTCATGCTTTaGGAACTCTGCAAAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PTVPKKVGIIWDLLPSVKGMLML*ELCKGI Trigger: TATGCCTTTGCAGAGTTCCAAAAGCATGAGCATGCC...TTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS TCA 90 bp | ATCACTATCTTCTACTTGTTCTTCCACCCTGCAGTTCTTCTTACCTaGTTCCTTAGGCTTCCGGTCACTGCTCTTCTTTACACCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITIFYLFFHPAVLLT*FLRLPVTALLYTWG Trigger: GCCCCAGGTGTAAAGAAGAGCAGTGACCGGAAGCCTAAGGAATCAGGTAAGAAGAACTGCAGGGTGGAAGAACAAGTAGAAGATAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS TCA 90 bp | CAAAGCCTGGTCTGCGAGACAAAGATATTCTGGTTCTTGAGTTTCTaGTGTTTCAGTAGCTCAAACCGCTCGCGTTTGGCCATATCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QSLVCETKIFWFLSF*CFSSSNRSRLAISA Trigger: CGCAGATATGGCCAAACGCGAGCGGTTTGAGCTACTGAAACATCAGAAACTCAAGAACCAGAATATCTTTGTCTCGCAGACCAGGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 90 bp | CAACTTCTGCTTATATTGTTCAACCAGCTGGTTGAAGCGGGCTTCTaGCTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTGCACGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLLLILFNQLVEAGF*LILLSLSFRRLHGR Trigger: TCTTCCGTGCAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | TGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAACAGCATGCTGGGCATCTTaGTATTTGTCCTTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CCSSPKEVRTGTQAGQETACWAS*YLSFAT Trigger: TGTGGCAAAGGACAAATACAAAGATGCCCAGCATGC...TGTTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | GAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTCACTATGGGTCTCTTTaGGGACCCAAAGATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERTMNVHNLQSPRKWVSSHYGSL*GPKDLW Trigger: CCAGAGATCTTTGGGTCCCAAAAGAGACCCATAGTG...AGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | ACATCTTGTGTCAGAGTTGTCCAGCACGGGGGTTGGTTTGCCTCCAGTGAGCTTCTGAACTACTTTCTGTaGCTTGTCTTTTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCVRVVQHGGWFASSELLNYFL*LVFSNF Trigger: GAAGTTGGAAAAGACAAGCAACAGAAAGTAGTTCAG...AAGCTCACTGGAGGCAAACCAACCCCCGTGCTGGACAACTCTGACACAAGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCAGACTTCACTTTGCCTTaGTCCCGCAGCCTAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GERTMNVHNLQSPRKWVSDFTLP*SRSLIL Trigger: CAAAATTAGGCTGCGGGACAAAGGCAAAGTGAAGTC...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 90 bp | TCTGGATGCAAGACAACTCGGACATACTTAAGATCCCCAAACTGTTaGAGGACCTCGCCAAGTGCCTCTTCTTCTGAGTCAAATGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGCKTTRTYLRSPNC*RTSPSASSSESNER Trigger: TCTTTCATTTGACTCAGAAGAAGAGGCACTTGGCGAGGTCCTCCAACAGTTTGGGGATCTTAAGTATGTCCGAGTTGTCTTGCATCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | GAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTTGGGCATCTTTGTATTaGTCCTTTGCCACAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ERTMNVHNLQSPRKWVSSWASLY*SFATAQ Trigger: TTGGGCTGTGGCAAAGGACAAATACAAAGATGCCCA...AGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | ACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAATTCCTGAGTCATGAATaGTGCGAATGCACAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TYSPQESGYHLGSASLSEFLSHE*CECTTF Trigger: AAAGGTTGTGCATTCGCACAATTCATGACTCAGGAA...TTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS-3UTR CAA 90 bp | CATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGGCTTCTTCACCTTCTTaGTCTGAAGCTTTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HECTQPTVPKKVGIIWDLASSPS*SEALLP Trigger: AGGCAGCAAAGCTTCAGACAAAGAAGGTGAAGAAGC...CAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 90 bp | CAACTTCTGCTTATATTGTTCAACCAGCTGGTTGAAGCGGGCTTCTaGCTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTAATTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLLILFNQLVEAGF*LILLSLSFRRLILG Trigger: CCCCAAAATTAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| CDS CCA 90 bp | CCTTTAGAAGGGCCCAGCAACTTCTGCTTATATTGTTCAACCAGCTaGTTGAAGCGGGCTTCTGCCTTATTCTCCTTAGCCTTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PLEGPSNFCLYCSTS*LKRASALFSLAFLL Trigger: TAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTGCTGGGCCCTTCTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCATTTCCTCAAGGGAGGCTCCTTTCTCTGTGATAACTCCAGCTTGTGTCAGGAGAAGCTATTGTaGATTCTCTTTCTTCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WSHFLKGGSFLCDNSSLCQEKLL*ILFLLR Trigger: ACGAAGAAGAAAGAGAATCAACAATAGCTTCTCCTG...ACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCCCTTGAGGAAATGGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | GTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTTGTACAGCAACTTCTGCTTATATaGTTCAACCAGCTGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VGIIWDLLPSVKDTAFVQQLLLI*FNQLVE Trigger: TTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTG...CTGTACAAAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS-3UTR CAA 90 bp | CCTACAGTCCCCAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAACAACTTCTGCTTATATaGTTCAACCAGCTGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PTVPKKVGIIWDLLPSVKQLLLI*FNQLVE Trigger: TTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTG...TTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTGGGGACTGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS GCA 90 bp | ATGAATTGTGCGAATGCACAACCTTTAGAATGCTCTGTGTCTGGATaGAAGACAACTCGGACATACTTAAGATCCCCAAACTGTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MNCANAQPLECSVSG*KTTRTYLRSPNCWR Trigger: CCTCCAACAGTTTGGGGATCTTAAGTATGTCCGAGTTGTCTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGCATTCGCACAATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | AAGGGCTTTCTGGAGCACTCGCTGGTTTTCTCAAGACAATGCCATAAAACAGCTATCACTATCTTCTACTaGTTCTTCCACCCTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KGFLEHSLVFSRQCHKTAITIFY*FFHPAV Trigger: AACTGCAGGGTGGAAGAACAAGTAGAAGATAGTGAT...AGCTGTTTTATGGCATTGTCTTGAGAAAACCAGCGAGTGCTCCAGAAAGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CTAAGTTCTCAGCCTTTTCTACAGACTACCACTGCTCCTTTTCCTTTGTTATTGTATCGTCCACAGCCTTaGGGAGATTGTGCAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSQPFLQTTTAPFPLLLYRPQP*GDCAGK Trigger: TTTGCCTGCACAATCTCCCAAAGGCTGTGGACGATA...CAATAACAAAGGAAAAGGAGCAGTGGTAGTCTGTAGAAAAGGCTGAGAACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CAAGAAAGTGGGTATCATCTGGGATCTGCTTCCCTCAGTGAAAGACACGGCTTTCTGAACTACTTTCTGTaGCTTGTCTTTTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QESGYHLGSASLSERHGFLNYFL*LVFSNF Trigger: GAAGTTGGAAAAGACAAGCAACAGAAAGTAGTTCAG...AAAGCCGTGTCTTTCACTGAGGGAAGCAGATCCCAGATGATACCCACTTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS CCA 90 bp | AGTCATGAATTGTGCGAATGCACAACCTTTAGAATGCTCTGTGTCTaGATGCAAGACAACTCGGACATACTTAAGATCCCCAAACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHELCECTTFRMLCV*MQDNSDILKIPKLL Trigger: CAACAGTTTGGGGATCTTAAGTATGTCCGAGTTGTCTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGCATTCGCACAATTCATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | GGAGAACGGACCATGAATGTACACAACCTACAGTCCCCAAGAAAGTGGGTATCATCACAGGAGAAGCTATaGTTGATTCTCTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GERTMNVHNLQSPRKWVSSQEKL*LILFLL Trigger: AAGAAGAAAGAGAATCAACAATAGCTTCTCCTGTGA...TGATACCCACTTTCTTGGGGACTGTAGGTTGTGTACATTCATGGTCCGTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | AATGCCATAAAACAGCTCTCTGCTTGGCTCAGCGATATTTTGGGACAGCATACTTTCCATCTGGCTTCTTaGGGATATTCACTTCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NAIKQLSAWLSDILGQHTFHLAS*GYSLQE Trigger: TTCTTGAAGTGAATATCCCAAAGAAGCCAGATGGAA...AGTATGCTGTCCCAAAATATCGCTGAGCCAAGCAGAGAGCTGTTTTATGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CAACATAAAACCAGCCAGTACAGTCTAAATGTTTCCATGATTTCTTCCTTCACTCAGCTGTCAAACCATTaGCTTCTCTTCATGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QHKTSQYSLNVSMISSFTQLSNH*LLFMRG Trigger: GCCCCTCATGAAGAGAAGCAAATGGTTTGACAGCTG...AGTGAAGGAAGAAATCATGGAAACATTTAGACTGTACTGGCTGGTTTTATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 90 bp | GAACTGAACAAAAGCAAAACCACGCATCTTTCCATCTGGCTTCTTTaGGATATTCACTTCAAGAACAGTTCCATAGTGAGTAAATACCGC | + |
|
Preference number: 5 (lower is better) Translates to: ELNKSKTTHLSIWLL*DIHFKNSSIVSKYR Trigger: GCGGTATTTACTCACTATGGAACTGTTCTTGAAGTGAATATCCCAAAGAAGCCAGATGGAAAGATGCGTGGTTTTGCTTTTGTTCAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS-3UTR CAA 90 bp | CAACATAAAACCAGCCAGTACAGTCTAAATGTTTCCATGATTTCTTCCTTCACTGCTTTGGCTCCTTCTTaGGGGACTCTGCATTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QHKTSQYSLNVSMISSFTALAPS*GTLHFH Trigger: ATGAAAATGCAGAGTCCCCAAAGAAGGAGCCAAAGC...AGTGAAGGAAGAAATCATGGAAACATTTAGACTGTACTGGCTGGTTTTATGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 90 bp | CTCACAGGAGAAGCTATTGTTGATTCTCTTTCTTCTTCGTCATCATaGCTATCATCATCTTCTTCATCATCACTATCTTCTACTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGEAIVDSLSSSSS*LSSSSSSSLSSTCS Trigger: AGAACAAGTAGAAGATAGTGATGATGAAGAAGATGATGATAGCCATGATGACGAAGAAGAAAGAGAATCAACAATAGCTTCTCCTGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | CCACTTCAGCCTTGGTCTGGAAGCCTGACCACGAGGTaGAGCCGGCTTTCCCTTTCTGCTCTCCAGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLQPWSGSLTTR*SRLSLSALQAP Trigger: AGGCGCCTGGAGAGCAGAAAGGGAAAGCCGGCTCCACCTCGTGGTCAGGCTTCCAGACCAAGGCTGAAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS TCA 72 bp | TCACCACGAAGCACTGCTTCACCGGACCCACCTGACTaGACAGCTCTTCCAGCTGATCGCTGCGAGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRSTASPDPPD*TALPADRCEPR Trigger: CCTCGGCTCGCAGCGATCAGCTGGAAGAGCTGTTCAGTCAGGTGGGTCCGGTGAAGCAGTGCTTCGTGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS TCA 72 bp | CTCCACCTGCTCCACTTCAGCCTTGGTCTGGAAGCCTaGCCACGAGGTGGAGCCGGCTTTCCCTTTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLLHFSLGLEA*PRGGAGFPFLL Trigger: GAGCAGAAAGGGAAAGCCGGCTCCACCTCGTGGTCAGGCTTCCAGACCAAGGCTGAAGTGGAGCAGGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS GCA 72 bp | GGCGCCTGCACGGAAGACGCTAACTGCTGCTTCTTTTaGTTCCGCTGGCCCATCTGGGGCTTTGGCTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GACTEDANCCFF*FRWPIWGFGFL Trigger: TAGGAAGCCAAAGCCCCAGATGGGCCAGCGGAAGCAAAAGAAGCAGCAGTTAGCGTCTTCCGTGCAGGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | CAGCAGCCTTCGTCCCAGCGCGGATCAAGCCTTCTCTaGCCAGATAGAGGTTCCGGGTTCCAGTTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QQPSSQRGSSLL*PDRGSGFQLAS Trigger: AGAAGCCAACTGGAACCCGGAACCTCTATCTGGCCAGAGAAGGCTTGATCCGCGCTGGGACGAAGGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | TTTGCTGCCTCATCCCGGGTCACAGCTAAGTCGACCTaGAGCTGTCGGCCGTCCAGTTTAAGCCCACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: FAASSRVTAKST*SCRPSSLSPPP Trigger: GGGTGGTGGGCTTAAACTGGACGGCCGACAGCTCAAGGTCGACTTAGCTGTGACCCGGGATGAGGCAGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | GAAGTGGCGGAGGGCTCTGAGGGCATGCTCATGCTTTaGGAACTCTGCAAAGGCATAGCCCAGGGACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: EVAEGSEGMLML*ELCKGIAQGLT Trigger: GGTCAGTCCCTGGGCTATGCCTTTGCAGAGTTCCAAAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 72 bp | TGCTCTCACTGTCCACTGTCCCCTCATCATAGGAGCTaGCTCCTTCCTCCAGGTCACTGTCCTCGTAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: CSHCPLSPHHRS*LLPPGHCPRRS Trigger: ACTCCTACGAGGACAGTGACCTGGAGGAAGGAGGCAGCTCCTATGATGAGGGGACAGTGGACAGTGAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 72 bp | GTAGGAGTCGTCTTCCTCGATGCTTTCCTCGGGAGCTaGTCTCTTGACTGCTCTCTTGTGCACACTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGVVFLDAFLGS*SLDCSLVHTHR Trigger: CCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAGCATCGAGGAAGACGACTCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | CTCCACTATGGGTCTCTTTTGGGACCCAAAGATCTCTaGGTTGTTGTTGAAGTGGCGGAGGGCTCTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHYGSLLGPKDL*VVVEVAEGSEG Trigger: GCCCTCAGAGCCCTCCGCCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAAGAGACCCATAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | GCTAACTGCTGCTTCTTTTGCTTCCGCTGGCCCATCTaGGGCTTTGGCTTCCTAGAAGGCAGGGACTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ANCCFFCFRWPI*GFGFLEGRDFT Trigger: AGTGAAGTCCCTGCCTTCTAGGAAGCCAAAGCCCCAGATGGGCCAGCGGAAGCAAAAGAAGCAGCAGTTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS TCA 72 bp | CGTCTTCCTCGATGCTTTCCTCGGGAGCTGCTCTCTTaGCTGCTCTCTTGTGCACACTCACAGGAGAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RLPRCFPRELLS*LLSCAHSQEKL Trigger: TAGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAGCATCGAGGAAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | GTTTCTGATGTTTCAGTAGCTCAAACCGCTCGCGTTTaGCCATATCTGCGGCACTCACACCCTCAGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSDVSVAQTARV*PYLRHSHPQQP Trigger: AGGCTGCTGAGGGTGTGAGTGCCGCAGATATGGCCAAACGCGAGCGGTTTGAGCTACTGAAACATCAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | ACACCTGGGGCAGAAGCATGCTGGGCATCTTTGTATTaGTCCTTTGCCACAGCCCAATCCACAGCCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TPGAEACWASLY*SFATAQSTATV Trigger: GACTGTGGCTGTGGATTGGGCTGTGGCAAAGGACAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | TCGTCTTCCTCGATGCTTTCCTCGGGAGCTGCTCTCTaGACTGCTCTCTTGTGCACACTCACAGGAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSMLSSGAAL*TALLCTLTGEA Trigger: AGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAGCATCGAGGAAGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | GCAGCAGCTTCCTTAGCTGTTTATCGTCCACAGCCTTaGGGAGATTGTGCAGGCAAAGCCTGGTCTGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AAASLAVYRPQP*GDCAGKAWSAR Trigger: TCTCGCAGACCAGGCTTTGCCTGCACAATCTCCCAAAGGCTGTGGACGATAAACAGCTAAGGAAGCTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | ACTATGGGTCTCTTTTGGGACCCAAAGATCTCTGGGTaGTTGTTGAAGTGGCGGAGGGCTCTGAGGGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: TMGLFWDPKISG*LLKWRRALRAC Trigger: GCATGCCCTCAGAGCCCTCCGCCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAAGAGACCCATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | TGGCCAGATAGAGGTTCCGGGTTCCAGTTGGCTTCTTCACCTTCTTaGTCTGAAGCTTTGCTGCCTCATCCCGGGTCACAGCTAAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WPDRGSGFQLASSPS*SEALLPHPGSQLSR Trigger: TCGACTTAGCTGTGACCCGGGATGAGGCAGCAAAGCTTCAGACAAAGAAGGTGAAGAAGCCAACTGGAACCCGGAACCTCTATCTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 72 bp | ATGAGGGGCGCTCCTTTAGAAGGGCCCAGCAACTTCTaGTTATATTGTTCAACCAGCTGGTTGAAGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MRGAPLEGPSNF*LYCSTSWLKRA Trigger: AGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTGCTGGGCCCTTCTAAAGGAGCGCCCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS CCA 72 bp | TTTTGGGACCCAAAGATCTCTGGGTTGTTGTTGAAGTaGCGGAGGGCTCTGAGGGCATGCTCATGCTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FWDPKISGLLLK*RRALRACSCFW Trigger: CCAAAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | TTTGGCTTCCTAGAAGGCAGGGACTTCACTTTGCCTTaGTCCCGCAGCCTAATTTTGGGGCCTCGGTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FGFLEGRDFTLP*SRSLILGPRCE Trigger: TTCACACCGAGGCCCCAAAATTAGGCTGCGGGACAAAGGCAAAGTGAAGTCCCTGCCTTCTAGGAAGCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | TCACTGCTCTTCTTTACACCTGGGGCAGAAGCATGCTGGGCATCTTaGTATTTGTCCTTTGCCACAGCCCAATCCACAGCCACAGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SLLFFTPGAEACWAS*YLSFATAQSTATVR Trigger: ACGGACTGTGGCTGTGGATTGGGCTGTGGCAAAGGACAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGGTGTAAAGAAGAGCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | GTTGTTGTTGAAGTGGCGGAGGGCTCTGAGGGCATGCTCATGCTTTaGGAACTCTGCAAAGGCATAGCCCAGGGACTGACCCTTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VVVEVAEGSEGMLML*ELCKGIAQGLTLHF Trigger: AAAATGAAGGGTCAGTCCCTGGGCTATGCCTTTGCAGAGTTCCAAAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTCAACAACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | TCCACTATGGGTCTCTTTTGGGACCCAAAGATCTCTGGGTTGTTGTaGAAGTGGCGGAGGGCTCTGAGGGCATGCTCATGCTTTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STMGLFWDPKISGLL*KWRRALRACSCFWN Trigger: GTTCCAAAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAAGAGACCCATAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | GAGAACTCCACTATGGGTCTCTTTTGGGACCCAAAGATCTCTGGGTaGTTGTTGAAGTGGCGGAGGGCTCTGAGGGCATGCTCATGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ENSTMGLFWDPKISG*LLKWRRALRACSCF Trigger: AAAGCATGAGCATGCCCTCAGAGCCCTCCGCCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAAGAGACCCATAGTGGAGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | CTCTTCTTTACACCTGGGGCAGAAGCATGCTGGGCATCTTTGTATTaGTCCTTTGCCACAGCCCAATCCACAGCCACAGTCCGTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFFTPGAEACWASLY*SFATAQSTATVRPF Trigger: AAAAGGACGGACTGTGGCTGTGGATTGGGCTGTGGCAAAGGACAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGGTGTAAAGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | GGCTTCTGCCTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTAATTTaGGGGCCTCGGTGTGAAGGGAGTGCCAGGACCTTTCTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GFCLILLSLSFRRLI*GPRCEGSARTFLLF Trigger: GAAGAGAAGAAAGGTCCTGGCACTCCCTTCACACCGAGGCCCCAAAATTAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| CDS GCA 72 bp | TTCCTCGATGCTTTCCTCGGGAGCTGCTCTCTTGACTaGTCTCTTGTGCACACTCACAGGAGAAGCTATTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLDAFLGSCSLD*SLVHTHRRSYC Trigger: ACAATAGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAGCATCGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 72 bp | AGACTGGAACATCTTCATCCTCTTGATCTTCAGCGCTaGTCTCACTGTCCACTGTCCCCTCATCATAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLEHLHPLDLQR*SHCPLSPHHRS Trigger: GCTCCTATGATGAGGGGACAGTGGACAGTGAGAGCAGCGCTGAAGATCAAGAGGATGAAGATGTTCCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | GGGCCCAGCAACTTCTGCTTATATTGTTCAACCAGCTaGTTGAAGCGGGCTTCTGCCTTATTCTCCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSNFCLYCSTS*LKRASALFSLA Trigger: GGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTGCTGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS CAA 72 bp | TTCTTTACACCTGGGGCAGAAGCATGCTGGGCATCTTaGTATTTGTCCTTTGCCACAGCCCAATCCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FFTPGAEACWAS*YLSFATAQSTA Trigger: GGCTGTGGATTGGGCTGTGGCAAAGGACAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGGTGTAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | TTCCTTAGGCTTCCGGTCACTGCTCTTCTTTACACCTaGGGCAGAAGCATGCTGGGCATCTTTGTATTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLRLPVTALLYT*GRSMLGIFVFV Trigger: GACAAATACAAAGATGCCCAGCATGCTTCTGCCCCAGGTGTAAAGAAGAGCAGTGACCGGAAGCCTAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | TTGGGGCTTACTGGTCACAGGCTTGGATTCCATTTTTaGCAGGCTGCGTTGGATCCTCAGCTCCTTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLTGHRLGFHF*QAALDPQLLHF Trigger: AAAGTGAAGGAGCTGAGGATCCAACGCAGCCTGCAAAAAATGGAATCCAAGCCTGTGACCAGTAAGCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS CAA 72 bp | CTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTAATTTaGGGGCCTCGGTGTGAAGGGAGTGCCAGGACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LILLSLSFRRLI*GPRCEGSARTF Trigger: AAAGGTCCTGGCACTCCCTTCACACCGAGGCCCCAAAATTAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
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| CDS GCA 72 bp | CTTTCCTCGGGAGCTGCTCTCTTGACTGCTCTCTTGTaGACACTCACAGGAGAAGCTATTGTTGATTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSSGAALLTALL*TLTGEAIVDSL Trigger: AAGAGAATCAACAATAGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 72 bp | CTTAGCTGTTTATCGTCCACAGCCTTTGGGAGATTGTaGAGGCAAAGCCTGGTCTGCGAGACAAAGATATTC | + |
|
Preference number: 6 (lower is better) Translates to: LSCLSSTAFGRL*RQSLVCETKIF Trigger: GAATATCTTTGTCTCGCAGACCAGGCTTTGCCTGCACAATCTCCCAAAGGCTGTGGACGATAAACAGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS GCA 72 bp | TCTGCCTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTaGACGGAAGACGCTAACTGCTGCTTCTTTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SALFSLAFLLGA*TEDANCCFFCF Trigger: GAAGCAAAAGAAGCAGCAGTTAGCGTCTTCCGTGCAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | AAGACAACTCGGACATACTTAAGATCCCCAAACTGTTaGAGGACCTCGCCAAGTGCCTCTTCTTCTGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: KTTRTYLRSPNC*RTSPSASSSES Trigger: TGACTCAGAAGAAGAGGCACTTGGCGAGGTCCTCCAACAGTTTGGGGATCTTAAGTATGTCCGAGTTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 72 bp | ATGCTTTCCTCGGGAGCTGCTCTCTTGACTGCTCTCTaGTGCACACTCACAGGAGAAGCTATTGTTGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLSSGAALLTAL*CTLTGEAIVDS Trigger: AGAATCAACAATAGCTTCTCCTGTGAGTGTGCACAAGAGAGCAGTCAAGAGAGCAGCTCCCGAGGAAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CAA 90 bp | TTAGAAGGGCCCAGCAACTTCTGCTTATATTGTTCAACCAGCTGGTaGAAGCGGGCTTCTGCCTTATTCTCCTTAGCCTTTCTTTTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LEGPSNFCLYCSTSW*KRASALFSLAFLLG Trigger: GCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTGCTGGGCCCTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
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| CDS GCA 72 bp | CTTATATTGTTCAACCAGCTGGTTGAAGCGGGCTTCTaGCTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LILFNQLVEAGF*LILLSLSFRRL Trigger: CAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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| CDS CCA 72 bp | CGGTCTTCTAAAGAGAACTCCACTATGGGTCTCTTTTaGGACCCAAAGATCTCTGGGTTGTTGTTGAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSKENSTMGLF*DPKISGLLLKW Trigger: CCACTTCAACAACAACCCAGAGATCTTTGGGTCCCAAAAGAGACCCATAGTGGAGTTCTCTTTAGAAGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CAA 72 bp | CCCAGCAACTTCTGCTTATATTGTTCAACCAGCTGGTaGAAGCGGGCTTCTGCCTTATTCTCCTTAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSNFCLYCSTSW*KRASALFSLAF Trigger: AAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAGCAGAAGTTGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007993.16 ENSMUST00000164563.2 |
||
| CDS TCA 72 bp | TTCTACTTGTTCTTCCACCCTGCAGTTCTTCTTACCTaGTTCCTTAGGCTTCCGGTCACTGCTCTTCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: FYLFFHPAVLLT*FLRLPVTALLY Trigger: GTAAAGAAGAGCAGTGACCGGAAGCCTAAGGAATCAGGTAAGAAGAACTGCAGGGTGGAAGAACAAGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 72 bp | GCGAATGCACAACCTTTAGAATGCTCTGTGTCTGGATaGAAGACAACTCGGACATACTTAAGATCCCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ANAQPLECSVSG*KTTRTYLRSPN Trigger: GTTTGGGGATCTTAAGTATGTCCGAGTTGTCTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGCATTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS GCA 72 bp | CTTATATTGTTCAACCAGCTGGTTGAAGCGGGCTTCTaGCTTATTCTCCTTAGCCTTTCTTTTAGGCGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LILFNQLVEAGF*LILLSLSFRRL Trigger: TAGGCGCCTAAAAGAAAGGCTAAGGAGAATAAGGCAGAAGCCCGCTTCAACCAGCTGGTTGAACAATATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164563.2 |
||
| CDS CAA 72 bp | CAAAAGCAAAACCACGCATCTTTCCATCTGGCTTCTTaGGGATATTCACTTCAAGAACAGTTCCATAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QKQNHASFHLAS*GYSLQEQFHSE Trigger: CTCACTATGGAACTGTTCTTGAAGTGAATATCCCAAAGAAGCCAGATGGAAAGATGCGTGGTTTTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 72 bp | AAAAGCAAAACCACGCATCTTTCCATCTGGCTTCTTTaGGATATTCACTTCAAGAACAGTTCCATAGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KSKTTHLSIWLL*DIHFKNSSIVS Trigger: ACTCACTATGGAACTGTTCTTGAAGTGAATATCCCAAAGAAGCCAGATGGAAAGATGCGTGGTTTTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
||
| CDS CCA 72 bp | GAAGCTATTGTTGATTCTCTTTCTTCTTCGTCATCATaGCTATCATCATCTTCTTCATCATCACTATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EAIVDSLSSSSS*LSSSSSSSLSS Trigger: AGAAGATAGTGATGATGAAGAAGATGATGATAGCCATGATGACGAAGAAGAAAGAGAATCAACAATAGCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007993.16 |
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