Pregenerated sensors for RBM26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022119Ensembl transcript IDs: ENSMUST00000022715.14, ENSMUST00000100327.10, ENSMUST00000163499.2, ENSMUST00000163545.8, ENSMUST00000172122.8
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCCTCTCAAAGAGCAGGGAACCCCCATGCCAACAACGCATTCATaGAATGGGATAATCATGGGCACAGGTGCTAACCACTGGAACAAC | + |
|
Preference number: 1 (lower is better) Translates to: APLKEQGTPMPTTHS*NGIIMGTGANHWNN Trigger: GTTGTTCCAGTGGTTAGCACCTGTGCCCATGATTATCCCATTTCATGAATGCGTTGTTGGCATGGGGGTTCCCTGCTCTTTGAGAGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR GCA 90 bp | GATGCTCTGCTGACGCTTCCCTGTGTCTCACCAACATCCACTAAGTaGTGGAATCAAATCTGGGGGCAGGACGACAAATACACAGGAATG | + |
|
Preference number: 1 (lower is better) Translates to: DALLTLPCVSPTSTK*WNQIWGQDDKYTGM Trigger: CATTCCTGTGTATTTGTCGTCCTGCCCCCAGATTTGATTCCAGCACTTAGTGGATGTTGGTGAGACACAGGGAAGCGTCAGCAGAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR GCA 90 bp | GGTTCCCATAGCATGTTGTTCAAATCTGCATTTGGCACATCAGTATaGCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: GSHSMLFKSAFGTSV*LSAVIMSSVSATTL Trigger: GAGGGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCCAAATGCAGATTTGAACAACATGCTATGGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR TCA 90 bp | GCAATGGCAAGATTAGTTAAGGTGACAGTGTGTAGCATTCATCTATaGACAAATCAAAAGAGTCACTGGCAGGTATGGTCTCTTCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: AMARLVKVTVCSIHL*TNQKSHWQVWSLQT Trigger: TGTCTGAAGAGACCATACCTGCCAGTGACTCTTTTGATTTGTTCATAGATGAATGCTACACACTGTCACCTTAACTAATCTTGCCATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR CCA 90 bp | AAAAGAAATGAAATTATTTTCCTTGTGCACTGGAGTCAGTGGCCCTaGCAGTTCCATCAAATCAACACACTCACAAGAAATAGACAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: KRNEIIFLVHWSQWP*QFHQINTLTRNRQV Trigger: AACTTGTCTATTTCTTGTGAGTGTGTTGATTTGATGGAACTGCCAGGGCCACTGACTCCAGTGCACAAGGAAAATAATTTCATTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR TCA 90 bp | CTCTCATGGCTTTATAGATTTCCCAAACATATCTCTCAGTTTGCCTaGGACATAATACATCTCATAAGGAAACTAAAAGGCCTTGTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: LSWLYRFPKHISQFA*DIIHLIRKLKGLVP Trigger: AGGAACAAGGCCTTTTAGTTTCCTTATGAGATGTATTATGTCTCAGGCAAACTGAGAGATATGTTTGGGAAATCTATAAAGCCATGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR CCA 90 bp | ACATTTCTAAATAAGGTCATAAACCTCACACATTTGATACACGTCTaGACTCAGATGGACTTGTACAGAACTGTAAAGATAAAATGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: TFLNKVINLTHLIHV*TQMDLYRTVKIKWS Trigger: TGACCATTTTATCTTTACAGTTCTGTACAAGTCCATCTGAGTCCAGACGTGTATCAAATGTGTGAGGTTTATGACCTTATTTAGAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGTCAGTGGCCCTGGCAGTTCCATCAAATCAACACACTCACAAGAAATAGAAGGACAAAGAGGGCTTaGTCATGTAGTCACAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: WSQWPWQFHQINTLTRNRRTKRA*SCSHKA Trigger: AGCTTTGTGACTACATGAGCAAGCCCTCTTTGTCCT...TCTATTTCTTGTGAGTGTGTTGATTTGATGGAACTGCCAGGGCCACTGACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTAAATTATTTTCCTTGTaGACTGGAGTCAGTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EILCQTVCSEVSSHSKQVKLFSL*TGVSGP Trigger: AGGGCCACTGACTCCAGTGCACAAGGAAAATAATTT...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTGTGGCTAGTGTTACTTaGAAACATTGCACTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QNSLSLCLEGFLNSLSLLVASVT*KHCTLP Trigger: TGGCAGAGTGCAATGTTTCCAAGTAACACTAGCCAC...AAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTTTTCCATTTCAAATATaGGGGGAAAACATGCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EILCQTVCSEVSSHSKQVFPFQI*GENMLE Trigger: CTCAAGCATGTTTTCCCCTCATATTTGAAATGGAAA...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR CAA 90 bp | GAAGGGAAGAAAACATTTCTAAATAAGGTCATAAACCTCACACATTaGATACACGTCTGGACTCAGATGGACTTGTACAGAACTGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EGKKTFLNKVINLTH*IHVWTQMDLYRTVK Trigger: CTTTACAGTTCTGTACAAGTCCATCTGAGTCCAGACGTGTATCAAATGTGTGAGGTTTATGACCTTATTTAGAAATGTTTTCTTCCCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR CAA 90 bp | GACACTGAAAGGTTTTATAGCACCAATGACTGTTTCCTAAGACACTaGAGGGGCCTGTATCACTTTAAAGTATTATCTTGTAAACAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: DTERFYSTNDCFLRH*RGLYHFKVLSCKQD Trigger: GTCTTGTTTACAAGATAATACTTTAAAGTGATACAGGCCCCTCAAGTGTCTTAGGAAACAGTCATTGGTGCTATAAAACCTTTCAGTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATTTGTCTGCATTTATCTaGTCTCCCCTGTCTGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYLSAFI*SPLSGI Trigger: TATTCCAGACAGGGGAGATCAGATAAATGCAGACAA...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCGTGCTAGAACTCTTCTaGAAATGCCTTTTACTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIVLELF*KCLLLS Trigger: AGAAAGTAAAAGGCATTTTCAGAAGAGTTCTAGCAC...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTCACAAGAAATAGACAAGTTAATCACAGTGTGTAACAAGTACTTTACAGTCATCTCTCAGTTTGCCTaGGACATAATACATCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: HSQEIDKLITVCNKYFTVISQFA*DIIHLI Trigger: TATGAGATGTATTATGTCTCAGGCAAACTGAGAGAT...GACTGTAAAGTACTTGTTACACACTGTGATTAACTTGTCTATTTCTTGTGAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACAAGAAATAGACAAGTTAATCACAGTGTGTAACAAGTACTTTACAGTCACATATCTCTCAGTTTaGCTGAGACATAATACATCT | + |
|
Preference number: 2 (lower is better) Translates to: HSQEIDKLITVCNKYFTVTYLSV*LRHNTS Trigger: AGATGTATTATGTCTCAGGCAAACTGAGAGATATGT...GACTGTAAAGTACTTGTTACACACTGTGATTAACTTGTCTATTTCTTGTGAGTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR GCA 72 bp | CTGACGCTTCCCTGTGTCTCACCAACATCCACTAAGTaGTGGAATCAAATCTGGGGGCAGGACGACAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LTLPCVSPTSTK*WNQIWGQDDKY Trigger: GTATTTGTCGTCCTGCCCCCAGATTTGATTCCAGCACTTAGTGGATGTTGGTGAGACACAGGGAAGCGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR CCA 72 bp | ACGCTTCCCTGTGTCTCACCAACATCCACTAAGTGCTaGAATCAAATCTGGGGGCAGGACGACAAATACACA | + |
|
Preference number: 3 (lower is better) Translates to: TLPCVSPTSTKC*NQIWGQDDKYT Trigger: TGTGTATTTGTCGTCCTGCCCCCAGATTTGATTCCAGCACTTAGTGGATGTTGGTGAGACACAGGGAAGCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTCAGTGGCCCTGGCAGTTCCATCAAATCAACACACTCACAAGAAATAGAATAAACCTCACACATTaGATACACGTCTGGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WSQWPWQFHQINTLTRNRINLTH*IHVWTQ Trigger: CTGAGTCCAGACGTGTATCAAATGTGTGAGGTTTAT...TCTATTTCTTGTGAGTGTGTTGATTTGATGGAACTGCCAGGGCCACTGACTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR GCA 72 bp | AGCATGTTGTTCAAATCTGCATTTGGCACATCAGTATaGCTATCCGCTGTCATTATGTCTTCTGTCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SMLFKSAFGTSV*LSAVIMSSVSA Trigger: GGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCCAAATGCAGATTTGAACAACATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCAGATTATAAGCTCCTaGATGATAGGGACCGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYQIISS*MIGTVS Trigger: AGACACGGTCCCTATCATCAAGGAGCTTATAATCTG...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR TCA 72 bp | AGATTAGTTAAGGTGACAGTGTGTAGCATTCATCTATaGACAAATCAAAAGAGTCACTGGCAGGTATGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLVKVTVCSIHL*TNQKSHWQVWS Trigger: AGACCATACCTGCCAGTGACTCTTTTGATTTGTTCATAGATGAATGCTACACACTGTCACCTTAACTAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTTGTTACTTGGAAACATaGCACTCTGCCATACTTATC | + |
|
Preference number: 3 (lower is better) Translates to: QNSLSLCLEGFLNSLSLLCYLET*HSAILI Trigger: GATAAGTATGGCAGAGTGCAATGTTTCCAAGTAACA...AAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR TCA 72 bp | CTTTATAGATTTCCCAAACATATCTCTCAGTTTGCCTaGGACATAATACATCTCATAAGGAAACTAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LYRFPKHISQFA*DIIHLIRKLKG Trigger: GCCTTTTAGTTTCCTTATGAGATGTATTATGTCTCAGGCAAACTGAGAGATATGTTTGGGAAATCTATAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR TCA 72 bp | CAATGTGGATCAAGACAGATCACTTATATACGACTATaGGTTTGTCACATCTTGTTTTTCATGAAGACAATC | + |
|
Preference number: 3 (lower is better) Translates to: QCGSRQITYIRL*VCHILFFMKTI Trigger: GATTGTCTTCATGAAAAACAAGATGTGACAAACTCATAGTCGTATATAAGTGATCTGTCTTGATCCACATTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR TCA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCTACCTTCAGGCTTCCTaGCGATGGCTGCTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSVCLSAVIMSSVSATTYLQAS*RWLLWR Trigger: CCTCCAGAGCAGCCATCGTCAGGAAGCCTGAAGGTA...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCTCTGTATCGGGAGCTTaGCTGGGGAGGGCTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GTSVCLSAVIMSSVSATTSVSGA*LGRAVI Trigger: AATCACAGCCCTCCCCAGTCAAGCTCCCGATACAGA...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCCTGCAAAGGAGGAAGTaGAGGAGGAGGTCCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSVCLSAVIMSSVSATTLQRRK*RRRSCD Trigger: GTCACAGGACCTCCTCCTCCACTTCCTCCTTTGCAG...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCTCTAAGATTCACAGGTaGCGGTGTAAGGATCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSVCLSAVIMSSVSATTSKIHR*RCKDRR Trigger: CCTCCGATCCTTACACCGCCACCTGTGAATCTTAGA...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAGCGAGCGCCGTGAATTaGAGCTGCTTCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSASAVN*SCFCFC Trigger: GCAGAAGCAGAAGCAGCTGCAATTCACGGCGCTCGC...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCTGCCATACTTATCCTGGTGCTAGAACTCTTCTGAAAATGCCTTTTACTGACCCAGCCGCTCTTTaGCTGACTGCTTCACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALCHTYPGARTLLKMPFTDPAAL*LTASQQ Trigger: CTGTTGTGAAGCAGTCAGTCAAAGAGCGGCTGGGTC...AGTAAAAGGCATTTTCAGAAGAGTTCTAGCACCAGGATAAGTATGGCAGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCACCTCGACCTCTTGTATaGATTCCTCTACCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSPRPLV*IPLPRP Trigger: TGGCCGAGGTAGAGGAATTCATACAAGAGGTCGAGG...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCAGCTGCTTCTGCTTCTaGTCTTGTCTTGAATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTSVCLSAVIMSSVSATTSCFCF*SCLECD Trigger: ATCACATTCAAGACAAGAGCAGAAGCAGAAGCAGCT...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTGCGAGCGCCGTGAATTaGAGCTGCTTCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EILCQTVCSEVSSHSKQVASAVN*SCFCFC Trigger: GCAGAAGCAGAAGCAGCTGCAATTCACGGCGCTCGC...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTGCCAGCTTCAAATCCTaGCCTTTGAAGCGAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EILCQTVCSEVSSHSKQVASFKS*PLKRAP Trigger: CGGCGCTCGCTTCAAAGGGCAGGATTTGAAGCTGGC...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR TCA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCCCATATTGCGCAAAATaGGGAAGAAGATCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GTSVCLSAVIMSSVSATTPYCAK*GRRSSL Trigger: TAGAGAAGATCTTCTTCCTCATTTTGCGCAATATGG...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTGAAGCGTCATCAATCTaGCAGTCCTCAATTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSEASSI*QSSISP Trigger: TGGGGAAATTGAGGACTGTCAGATTGATGACGCTTC...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTATTCATTTTTGTGCCTATCACAAAATCTACCACATAGCAGGTAGTCACGGTCGCAGAGTTAGGTaGCGCATCCATGCCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: CLIHFCAYHKIYHIAGSHGRRVR*RIHARR Trigger: CCGTCTGGCATGGATGCGCCACCTAACTCTGCGACC...GTGACTACCTGCTATGTGGTAGATTTTGTGATAGGCACAAAAATGAATAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTCCTCGACCTCTTGTATaGATTCCTCTACCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EILCQTVCSEVSSHSKQVPRPLV*IPLPRP Trigger: TGGCCGAGGTAGAGGAATTCATACAAGAGGTCGAGG...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR GCA 90 bp | GCACTCTGCCATACTTATCCTGGTGCTAGAACTCTTCTGAAAATGCCTTTTACTCTGGGAAAGGCAGCATaGCTGGCAGATTCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCHTYPGARTLLKMPFTLGKAA*LADSHL Trigger: AAGATGTGAATCTGCCAGGCATGCTGCCTTTCCCAG...AGTAAAAGGCATTTTCAGAAGAGTTCTAGCACCAGGATAAGTATGGCAGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTTTAGTCCTATCAAGTTaGGCCTTTGTGCATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSLVLSS*AFVHGL Trigger: GAGTCCATGCACAAAGGCCCAACTTGATAGGACTAA...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTTCACAACAGGTAAAATaGGCTGCTGGACTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSSQQVK*AAGLKA Trigger: AGCCTTTAGTCCAGCAGCCCATTTTACCTGTTGTGA...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAATACCGGTCTCTATATaGATCTCTTCGAGGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSIPVSI*ISSRRV Trigger: AACCCTCCTCGAAGAGATTCATATAGAGACCGGTAT...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTATTCATTTTTGTGCCTATCACAAAATCTACCACATAGCAGGTAGTCACTCAACAACAGGTGGCTaGGCTGGGAAAGGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CLIHFCAYHKIYHIAGSHSTTGG*AGKGSM Trigger: CATGCTGCCTTTCCCAGCTCAGCCACCTGTTGTTGA...GTGACTACCTGCTATGTGGTAGATTTTGTGATAGGCACAAAAATGAATAAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCAGTGGCCCTGGCAGTTCCATCAAATCAACACACTCACAAGAAATAGAAGCTGCTTCTGCTTCTaGTCTTGTCTTGAATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSQWPWQFHQINTLTRNRSCFCF*SCLECD Trigger: ATCACATTCAAGACAAGAGCAGAAGCAGAAGCAGCT...TCTATTTCTTGTGAGTGTGTTGATTTGATGGAACTGCCAGGGCCACTGACTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR GCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCGCCAGCTTCAAATCCTaGCCTTTGAAGCGAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIASFKS*PLKRAP Trigger: CGGCGCTCGCTTCAAAGGGCAGGATTTGAAGCTGGC...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GCACTCTGCCATACTTATCCTGGTGCTAGAACTCTTCTGAAAATGCCTTTTACTGAAAGGCAGCATGCCTaGCAGATTCACATCTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALCHTYPGARTLLKMPFTERQHA*QIHIFY Trigger: GTAGAAGATGTGAATCTGCCAGGCATGCTGCCTTTC...AGTAAAAGGCATTTTCAGAAGAGTTCTAGCACCAGGATAAGTATGGCAGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTTTGGGCCTTTGTGCATaGACTCTGTGTCTATACATA | + |
|
Preference number: 4 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSLGLCA*TLCLYI Trigger: TATGTATAGACACAGAGTCCATGCACAAAGGCCCAA...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATCTGAAGTAGCACTCTaGGCTTCTGCTGGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIASEVAL*ASAGSV Trigger: AACAGAGCCAGCAGAAGCCCAGAGTGCTACTTCAGA...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR CAA 72 bp | ACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTaGTTCAAATCTGCATTTGGCACATCAGTATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQSFLPGGSHSM*FKSAFGTSVCL Trigger: TAGGCATACTGATGTGCCAAATGCAGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTGAAGCGTCATCAATCTaGCAGTCCTCAATTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EILCQTVCSEVSSHSKQVEASSI*QSSISP Trigger: TGGGGAAATTGAGGACTGTCAGATTGATGACGCTTC...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR GCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCATGGAAGTGTTTGTTATaGTTGGGGCTTCAGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSWKCLL*LGLQDC Trigger: ACAATCCTGAAGCCCCAAGCATAACAAACACTTCCA...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | GCACTCTGCCATACTTATCCTGGTGCTAGAACTCTTCTGAAAATGCCTTTTACTCAAGTTGGGCCTTTGTaGATGGACTCTGTGTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: ALCHTYPGARTLLKMPFTQVGPL*MDSVSI Trigger: TATAGACACAGAGTCCATGCACAAAGGCCCAACTTG...AGTAAAAGGCATTTTCAGAAGAGTTCTAGCACCAGGATAAGTATGGCAGAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCACGCTCTTTGACTGACTaGTTCACAACAGGTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSRSLTD*FTTGKM Trigger: CATTTTACCTGTTGTGAAGCAGTCAGTCAAAGAGCG...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTGCAGAAATCTCCAGTaGTCGGGGTCGGTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLICRNLQ*SGSVIH Trigger: GTGGATCACCGACCCCGAGCACTGGAGATTTCTGCA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | CACTCACAAGAAATAGACAAGTTAATCACAGTGTGTAACAAGTACTTTACAGTCTGCAGAAATCTCCAGTaGTCGGGGTCGGTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSQEIDKLITVCNKYFTVCRNLQ*SGSVIH Trigger: GTGGATCACCGACCCCGAGCACTGGAGATTTCTGCA...GACTGTAAAGTACTTGTTACACACTGTGATTAACTTGTCTATTTCTTGTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATCTACCTCGGCCAGATaGAAGAATTCCTCTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIASTSAR*KNSSFS Trigger: GCTAAAAGAGGAATTCTTTCATCTGGCCGAGGTAGA...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTCCTTCAACAACAGGTaGCTGAGCTGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLISFNNR*LSWERQ Trigger: CTGCCTTTCCCAGCTCAGCCACCTGTTGTTGAAGGA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCATCTTTTTCTGGATTCTaGATCCACTACTATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSSFSGF*IHYYPH Trigger: ATGAGGATAGTAGTGGATTCAGAATCCAGAAAAAGA...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCATTCTGGGGAAGTTCTaGAGTAGCACTCTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIILGKF*SSTLGF Trigger: GAAGCCCAGAGTGCTACTTCAGAACTTCCCCAGAAT...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTCATCAAGCTGATCAATaGATAACGCCTTTAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSHQADQ*ITPLIL Trigger: AAGAATTAAAGGCGTTATGCATTGATCAGCTTGATG...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCAAATTGCAGCTGCTTCTaGTTCTGCTCTTGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIANCSCF*FCSCLE Trigger: TTCAAGACAAGAGCAGAAGCAGAAGCAGCTGCAATT...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTAATTGCAGCTGCTTCTaGTTCTGCTCTTGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EILCQTVCSEVSSHSKQVNCSCF*FCSCLE Trigger: TTCAAGACAAGAGCAGAAGCAGAAGCAGCTGCAATT...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR GCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCGCCGTGAATTGCAGCTaGTTCTGCTTCTGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIAVNCS*FCFCSC Trigger: ACAAGAGCAGAAGCAGAAGCAGCTGCAATTCACGGC...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | CACTCACAAGAAATAGACAAGTTAATCACAGTGTGTAACAAGTACTTTACAGTCGCCGTGAATTGCAGCTaGTTCTGCTTCTGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSQEIDKLITVCNKYFTVAVNCS*FCFCSC Trigger: ACAAGAGCAGAAGCAGAAGCAGCTGCAATTCACGGC...GACTGTAAAGTACTTGTTACACACTGTGATTAACTTGTCTATTTCTTGTGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCACCGTTTCTTTGGCATTaGTGGCCTTACATAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIAPFLWH*WPYIRV Trigger: AACTCTTATGTAAGGCCACCAATGCCAAAGAAACGG...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATGTGATTATTGCATaGAGTGAAGCGTCATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: IMDRHNHSFLGVPIACCSNVIIA*SEASSI Trigger: GATTGATGACGCTTCACTCCATGCAATAATCACATT...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCACTGGGTCGCTTCCATaGTCAAAAGGACACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLITGSLP*SKGHMS Trigger: AGACATGTGTCCTTTTGATCATGGAAGCGACCCAGT...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTTCTGCTCCTCGTTCTaGTCCTATCTCTATCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIFCSSF*SYLYPC Trigger: ACAGGGATAGAGATAGGAGCAGAACGAGGAGCAGAA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTGATTCAACCTTCTaGAAAACTTCTTCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIACDSTF*KTSSLA Trigger: AGCGAGAGAAGAAGTTTTCCAGAAGGTTGAATCACA...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATTTCTTTGGCATTGGTaGCCTTACATAAGAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIAFLWHW*PYIRVV Trigger: CACAACTCTTATGTAAGGCCACCAATGCCAAAGAAA...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATTGTTTTTATACTTTTaGGAAGACAGCGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKIIMDRHNHSFLGVPIALFLYF*EDSVQE Trigger: CTCCTGGACGCTGTCTTCCCAAAAGTATAAAAACAA...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTTTGTTTTTATACTTTTaGGAAGACAGCGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EILCQTVCSEVSSHSKQVLFLYF*EDSVQE Trigger: CTCCTGGACGCTGTCTTCCCAAAAGTATAAAAACAA...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR TCA 90 bp | CACTCACAAGAAATAGACAAGTTAATCACAGTGTGTAACAAGTACTTTACAGTCTCTACCTCGGCCAGATaGAAGAATTCCTCTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQEIDKLITVCNKYFTVSTSAR*KNSSFS Trigger: GCTAAAAGAGGAATTCTTTCATCTGGCCGAGGTAGA...GACTGTAAAGTACTTGTTACACACTGTGATTAACTTGTCTATTTCTTGTGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTTATTCATTTTTGTGCCTATCACAAAATCTACCACATAGCAGGTAGTCACACAGGTAAAATGGGCTaGTGGACTAAAGGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: CLIHFCAYHKIYHIAGSHTGKMG*WTKGCI Trigger: AATACAGCCTTTAGTCCAGCAGCCCATTTTACCTGT...GTGACTACCTGCTATGTGGTAGATTTTGTGATAGGCACAAAAATGAATAAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATAGTGTTTGTTATGCTTaGGGCTTCAGGATTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYSVCYA*GFRIVA Trigger: GGCTACAATCCTGAAGCCCCAAGCATAACAAACACT...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCGGTAAAATGGGCTGCTaGACTAAAGGCTGTATTACC | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIGKMGC*TKGCIT Trigger: GGTAATACAGCCTTTAGTCCAGCAGCCCATTTTACC...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCACTGCTTCTGTACTTaGGATTGCTTTCTTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYHCFCT*DCFLCF Trigger: GAAGCAAAGAAAGCAATCTCAAGTACAGAAGCAGTG...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR TCA 90 bp | ACATTTGATACACGTCTGGACTCAGATGGACTTGTACAGAACTGTAAAGATAAACCATATTGCGCAAAATaGGGAAGAAGATCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TFDTRLDSDGLVQNCKDKPYCAK*GRRSSL Trigger: TAGAGAAGATCTTCTTCCTCATTTTGCGCAATATGG...TTTATCTTTACAGTTCTGTACAAGTCCATCTGAGTCCAGACGTGTATCAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATTCTACACCGTTTCTTTaGCATTGGTGGCCTTACATA | + |
|
Preference number: 4 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYSTPFL*HWWPYI Trigger: TATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGA...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTATTCATTTTTGTGCCTATCACAAAATCTACCACATAGCAGGTAGTCACATCTTCTACAACTACTaGGTCGCTTCCATGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLIHFCAYHKIYHIAGSHIFYNY*VASMIK Trigger: TTTGATCATGGAAGCGACCCAGTAGTTGTAGAAGAT...GTGACTACCTGCTATGTGGTAGATTTTGTGATAGGCACAAAAATGAATAAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | CAGAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTCTTCTTCTGGAAACCTaGGCTGTTTGTCCTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSLCLEGFLNSLSLLLLLET*AVCPIK Trigger: TTTAATAGGACAAACAGCCCAGGTTTCCAGAAGAAG...AAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR GCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTGCTTCTTCATAAGTTaGGAATTGAATAAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLICFFIS*ELNKGT Trigger: GGTGCCCTTATTCAATTCGCAACTTATGAAGAAGCA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTATTCATTTTTGTGCCTATCACAAAATCTACCACATAGCAGGTAGTCACAACTTAGTTACATTCTaGGGAAGTTCTGAAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLIHFCAYHKIYHIAGSHNLVTF*GSSEVA Trigger: TGCTACTTCAGAACTTCCCCAGAATGTAACTAAGTT...GTGACTACCTGCTATGTGGTAGATTTTGTGATAGGCACAAAAATGAATAAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCAGCCTTCAAAGCAGCTaGATTATACACCGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSLSLCLEGFLNSLSLLISLQSS*IIHRFC Trigger: ACAAAAACGGTGTATAATCCAGCTGCTTTGAAGGCT...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTGATACACGTCTGGACTCAGATGGACTTGTACAGAACTGTAAAGATAAAAATGTGATTATTGCATaGAGTGAAGCGTCATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TFDTRLDSDGLVQNCKDKNVIIA*SEASSI Trigger: GATTGATGACGCTTCACTCCATGCAATAATCACATT...TTTATCTTTACAGTTCTGTACAAGTCCATCTGAGTCCAGACGTGTATCAAATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATAGAAATACATCAAGCTaGTCAATGCATAACGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYRNTSS*SMHNAF Trigger: AAAGGCGTTATGCATTGATCAGCTTGATGTATTTCT...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| 3UTR CAA 72 bp | AATGGTCATCACGGTCCATGTAAACATCTATTCAGATaGATAGAGAGCAAACCAAATGACAAGATGCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: NGHHGPCKHLFR*IESKPNDKMLL Trigger: TAATAGCATCTTGTCATTTGGTTTGCTCTCTATCAATCTGAATAGATGTTTACATGGACCGTGATGACCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| 3UTR CAA 72 bp | AAAACATTTCTAAATAAGGTCATAAACCTCACACATTaGATACACGTCTGGACTCAGATGGACTTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTFLNKVINLTH*IHVWTQMDLYR Trigger: TCTGTACAAGTCCATCTGAGTCCAGACGTGTATCAAATGTGTGAGGTTTATGACCTTATTTAGAAATGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS CCA 90 bp | TGGCGGTGTAAGGATCGGAGGAGGTGGAGGCAGCCCGGGAGGAGGTaGTCCTTCAACAACAGGTGGCTGAGCTGGGAAAGGCAGCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: WRCKDRRRWRQPGRR*SFNNRWLSWERQHA Trigger: GGCATGCTGCCTTTCCCAGCTCAGCCACCTGTTGTTGAAGGACCACCTCCTCCCGGGCTGCCTCCACCTCCTCCGATCCTTACACCGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS TCA 90 bp | GGTGGAGGCAGCCCGGGAGGAGGTGGTCCTTCAACAACAGGTGGCTaGGCTGGGAAAGGCAGCATGCCTGGCAGATTCACATCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: GGGSPGGGGPSTTGG*AGKGSMPGRFTSST Trigger: TGTAGAAGATGTGAATCTGCCAGGCATGCTGCCTTTCCCAGCTCAGCCACCTGTTGTTGAAGGACCACCTCCTCCCGGGCTGCCTCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 90 bp | GCCAGTTGTTACTACAGTAGGGACAGAGCTGGTCGCAGAGTTAGGTaGCGCATCCATGCCAGACGGCTGCAAAGGAGGAAGTGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASCYYSRDRAGRRVR*RIHARRLQRRKWRR Trigger: CCTCCTCCACTTCCTCCTTTGCAGCCGTCTGGCATGGATGCGCCACCTAACTCTGCGACCAGCTCTGTCCCTACTGTAGTAACAACTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS TCA 90 bp | CTATCACTCTCTGTAAATGCAGAAATCTCCAGTGCTCGGGGTCGGTaGTCCACTACAGCATGCCCAGGCACACCTCGGCCTCGGCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSVNAEISSARGR*STTACPGTPRPRPL Trigger: TAGAGGCCGAGGCCGAGGTGTGCCTGGGCATGCTGTAGTGGATCACCGACCCCGAGCACTGGAGATTTCTGCATTTACAGAGAGTGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS GCA 90 bp | GAGGTGGTCCTTCAACAACAGGTGGCTGAGCTGGGAAAGGCAGCATaGCTGGCAGATTCACATCTTCTACAACTACTGGGTCGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EVVLQQQVAELGKAA*LADSHLLQLLGRFH Trigger: ATGGAAGCGACCCAGTAGTTGTAGAAGATGTGAATCTGCCAGGCATGCTGCCTTTCCCAGCTCAGCCACCTGTTGTTGAAGGACCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 90 bp | TGGTCCTTCAACAACAGGTGGCTGAGCTGGGAAAGGCAGCATGCCTaGCAGATTCACATCTTCTACAACTACTGGGTCGCTTCCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: WSFNNRWLSWERQHA*QIHIFYNYWVASMI Trigger: GATCATGGAAGCGACCCAGTAGTTGTAGAAGATGTGAATCTGCCAGGCATGCTGCCTTTCCCAGCTCAGCCACCTGTTGTTGAAGGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS GCA 90 bp | AAGAAGATCTTCTCTATCACTCTCTGTAAATGCAGAAATCTCCAGTaGTCGGGGTCGGTGATCCACTACAGCATGCCCAGGCACACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KKIFSITLCKCRNLQ*SGSVIHYSMPRHTS Trigger: CGAGGTGTGCCTGGGCATGCTGTAGTGGATCACCGACCCCGAGCACTGGAGATTTCTGCATTTACAGAGAGTGATAGAGAAGATCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS-3UTR CAA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTCTCTGTATCGGGAGCTaGACTGGGGAGGGCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSLCIGS*TGEGCD Trigger: ATCACAGCCCTCCCCAGTCAAGCTCCCGATACAGAG...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS GCA 90 bp | TCTGTTGTAGCTGATGGTACAGGACCCAGCCGCTCTTTGACTGACTaGTTCACAACAGGTAAAATGGGCTGCTGGACTAAAGGCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVVADGTGPSRSLTD*FTTGKMGCWTKGFG Trigger: ACCAAAGCCTTTAGTCCAGCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAAAGAGCGGCTGGGTCCTGTACCATCAGCTACAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163545.8 |
||
| CDS GCA 90 bp | TCTGTTGTAGCTGATGGTACAGGACCCAGCCGCTCTTTGACTGACTaGTTCACAACAGGTAAAATGGGCTGCTGGACTAAAGGCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SVVADGTGPSRSLTD*FTTGKMGCWTKGCI Trigger: AATACAGCCTTTAGTCCAGCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAAAGAGCGGCTGGGTCCTGTACCATCAGCTACAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 |
||
| CDS CCA 90 bp | ACAGATAACTTAGTTACATTCTGGGGAAGTTCTGAAGTAGCACTCTaGGCTTCTGCTGGCTCTGTTGTAGCTGATGGTACAGGACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDNLVTFWGSSEVAL*ASAGSVVADGTGPS Trigger: GCTGGGTCCTGTACCATCAGCTACAACAGAGCCAGCAGAAGCCCAGAGTGCTACTTCAGAACTTCCCCAGAATGTAACTAAGTTATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022715.14 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS-3UTR CAA 90 bp | GGCACATCAGTATGCCTATCCGCTGTCATTATGTCTTCTGTCTCTGCCACCACCCTGAAACAGATGGCTTaGATACAAAACCCAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTSVCLSAVIMSSVSATTLKQMA*IQNPTC Trigger: ACAGGTTGGGTTTTGTATCAAAGCCATCTGTTTCAG...GGTGGTGGCAGAGACAGAAGACATAATGACAGCGGATAGGCATACTGATGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS TCA 90 bp | ACCTACTTCCTCTTCATCAGGTTCAGCTTCTTCAGTGTCCACAGCTaGCATGTTAGCTATTGGTTTGTTCCAGGCCAGCTTCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TYFLFIRFSFFSVHS*HVSYWFVPGQLQIL Trigger: CAGGATTTGAAGCTGGCCTGGAACAAACCAATAGCTAACATGTCAGCTGTGGACACTGAAGAAGCTGAACCTGATGAAGAGGAAGTAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS TCA 90 bp | CTCTCTTTCCTCTTCATCAGGTTCAGCTTCTTCAGTGTCCACAGCTaGCATGTTAGCTATTGGTTTGTTCCAGGCCAGCTTCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFLFIRFSFFSVHS*HVSYWFVPGQLQIL Trigger: CAGGATTTGAAGCTGGCCTGGAACAAACCAATAGCTAACATGTCAGCTGTGGACACTGAAGAAGCTGAACCTGATGAAGAGGAAAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS TCA 90 bp | CTGAAATTCCTCTTCATCAGGTTCAGCTTCTTCAGTGTCCACAGCTaGCATGTTAGCTATTGGTTTGTTCCAGGCCAGCTTCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKFLFIRFSFFSVHS*HVSYWFVPGQLQIL Trigger: CAGGATTTGAAGCTGGCCTGGAACAAACCAATAGCTAACATGTCAGCTGTGGACACTGAAGAAGCTGAACCTGATGAAGAGGAATTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163545.8 |
||
| CDS-3UTR CAA 90 bp | ATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCACTCTACACCGTTTCTTaGGCATTGGTGGCCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: IMDRHNHSFLGVPIACCSLYTVS*ALVALH Trigger: ATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAG...TGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS TCA 90 bp | GTAACTGCGACTTCTCCCTCGCCTTCTGTTATACCGGTCTCTATATaGATCTCTTCGAGGAGGGTTTCGATCATAATCTCTTTTTCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTATSPSPSVIPVSI*ISSRRVSIIISFSR Trigger: TCTCGAAAAAGAGATTATGATCGAAACCCTCCTCGAAGAGATTCATATAGAGACCGGTATAACAGAAGGCGAGGGAGAAGTCGCAGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS-3UTR CAA 90 bp | GGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATGTTGTTCAAATCTGCTTCTGCTCTTGTCTaGAATGTGATTATTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GQTQSFLPGGSHSMLFKSASALV*NVIIAW Trigger: CCATGCAATAATCACATTCAAGACAAGAGCAGAAGC...AGATTTGAACAACATGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCAGCGAGCGCCGTGAATaGCAGCTGCTTCTGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSLSLCLEGFLNSLSLLISERRE*QLLLLL Trigger: CAGAAGCAGAAGCAGCTGCAATTCACGGCGCTCGCT...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | CACTCACAAGAAATAGACAAGTTAATCACAGTGTGTAACAAGTACTTTACAGTCAGCGAGCGCCGTGAATaGCAGCTGCTTCTGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSQEIDKLITVCNKYFTVSERRE*QLLLLL Trigger: CAGAAGCAGAAGCAGCTGCAATTCACGGCGCTCGCT...GACTGTAAAGTACTTGTTACACACTGTGATTAACTTGTCTATTTCTTGTGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS CCA 90 bp | TCTCATACAGAACCCCTTTTCATCATAATCTCTACACCGTTTCTTTaGCATTGGTGGCCTTACATAAGAGTTGTGATCCACCTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHTEPLFIIISTPFL*HWWPYIRVVIHLVF Trigger: GAAGACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAGGGGTTCTGTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 90 bp | TCCATGTCACCTGATGTTAGTCCTATCAAGTTGGGCCTTTGTGCATaGACTCTGTGTCTATACATAGGTCTGGAAGTGTTTGTTATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SMSPDVSPIKLGLCA*TLCLYIGLEVFVML Trigger: AAGCATAACAAACACTTCCAGACCTATGTATAGACACAGAGTCCATGCACAAAGGCCCAACTTGATAGGACTAACATCAGGTGACATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTTGCTGAGCCAGGACTaGAGCGCCTCGAAGTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NSLSLCLEGFLNSLSLLILLSQD*SASKFS Trigger: CGAAAACTTCGAGGCGCTCAAGTCCTGGCTCAGCAA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | GCACTCTGCCATACTTATCCTGGTGCTAGAACTCTTCTGAAAATGCCTTTTACTAAGTGTTTGTTATGCTaGGGGCTTCAGGATTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALCHTYPGARTLLKMPFTKCLLC*GLQDCS Trigger: GCTACAATCCTGAAGCCCCAAGCATAACAAACACTT...AGTAAAAGGCATTTTCAGAAGAGTTCTAGCACCAGGATAAGTATGGCAGAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATGGACCCAGCCGCTCTTaGACTGACTGCTTCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYGPSRS*TDCFTT Trigger: TGTTGTGAAGCAGTCAGTCAAAGAGCGGCTGGGTCC...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS CCA 90 bp | GAACCCCTTTTCATCATAATCTCTACACCGTTTCTTTGGCATTGGTaGCCTTACATAAGAGTTGTGATCCACCTGGTCTTCATGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: EPLFIIISTPFLWHW*PYIRVVIHLVFMKF Trigger: GAATTTCATGAAGACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAGGGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 90 bp | ACAGAACCCCTTTTCATCATAATCTCTACACCGTTTCTTTGGCATTaGTGGCCTTACATAAGAGTTGTGATCCACCTGGTCTTCATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TEPLFIIISTPFLWH*WPYIRVVIHLVFMK Trigger: TTTCATGAAGACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAGGGGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAGATTATTATGGACAGACACAATCATTCCTTCCTGGGGGTTCCCATAGCATTCATAAGTTGCGAATaGAATAAGGGCACCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKIIMDRHNHSFLGVPIAFISCE*NKGTFR Trigger: CCTGAAGGTGCCCTTATTCAATTCGCAACTTATGAA...TGCTATGGGAACCCCCAGGAAGGAATGATTGTGTCTGTCCATAATAATCTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | GCACTCTGCCATACTTATCCTGGTGCTAGAACTCTTCTGAAAATGCCTTTTACTTTTGTTTTTATACTTTaGGGAAGACAGCGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALCHTYPGARTLLKMPFTFVFIL*GRQRPG Trigger: TCCTGGACGCTGTCTTCCCAAAAGTATAAAAACAAA...AGTAAAAGGCATTTTCAGAAGAGTTCTAGCACCAGGATAAGTATGGCAGAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTGCTTCTGCTCTTGTCTaGAATGTGATTATTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: EILCQTVCSEVSSHSKQVASALV*NVIIAW Trigger: CCATGCAATAATCACATTCAAGACAAGAGCAGAAGC...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTATCAAGTTGGGCCTTaGTGCATGGACTCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLSLCLEGFLNSLSLLIYQVGP*CMDSVS Trigger: AGACACAGAGTCCATGCACAAAGGCCCAACTTGATA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATGTTAGTCCTATCAAGTaGGGCCTTTGTGCATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYVSPIK*GLCAWT Trigger: AGTCCATGCACAAAGGCCCAACTTGATAGGACTAAC...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTGTGCCAGACAGTATGTTCTGAAGTATCATCACACTCAAAGCAGGTTTTTGTTTTTATACTTTaGGGAAGACAGCGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EILCQTVCSEVSSHSKQVFVFIL*GRQRPG Trigger: TCCTGGACGCTGTCTTCCCAAAAGTATAAAAACAAA...AACCTGCTTTGAGTGTGATGATACTTCAGAACATACTGTCTGGCACAAGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172122.8 |
||
| CDS-3UTR CAA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATGAGCCAAAACATATTTaGCTAGGGCTGATGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYEPKHI*LGLMDL Trigger: CAGATCCATCAGCCCTAGCAAAATATGTTTTGGCTC...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS TCA 90 bp | GGAGGAACCTTCCGAAGTTCAAGTTTAGTATTTTCATTTCCAAACTaGACCTTCTTCTGGAAACCTGGGCTGTTTGTCCTATTAAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: GGTFRSSSLVFSFPN*TFFWKPGLFVLLKF Trigger: AAATTTTAATAGGACAAACAGCCCAGGTTTCCAGAAGAAGGTTCAGTTTGGAAATGAAAATACTAAACTTGAACTTCGGAAGGTTCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS-3UTR CAA 90 bp | GAATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATACACTGCTTCTGTACTaGAGATTGCTTTCTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EFFKSLSRGLFKFAIPSYTLLLY*RLLSLL Trigger: AAGCAAAGAAAGCAATCTCAAGTACAGAAGCAGTGT...ATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS-3UTR CAA 90 bp | AATTCTTTAAGTCTTTGTCTCGAGGGCTTTTTAAATTCGCTATCCCTTCTTATCTTGAGATTGCTTTCTTaGCTTCTTCATAAGTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: NSLSLCLEGFLNSLSLLILRLLS*LLHKLR Trigger: TCGCAACTTATGAAGAAGCAAAGAAAGCAATCTCAA...GATAAGAAGGGATAGCGAATTTAAAAAGCCCTCGAGACAAAGACTTAAAGAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163499.2 |
||
| CDS GCA 72 bp | CATGCCCAGGCACACCTCGGCCTCGGCCTCTACCCCTaGCCCGGCCGTGAGCTGTACCTCGACCTCTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: HAQAHLGLGLYP*PGRELYLDLLY Trigger: ATACAAGAGGTCGAGGTACAGCTCACGGCCGGGGCAGGGGTAGAGGCCGAGGCCGAGGTGTGCCTGGGCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CCA 72 bp | ACCGGGAGGTGGCACAGGGGGTCTAAGATTCACAGGTaGCGGTGTAAGGATCGGAGGAGGTGGAGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TGRWHRGSKIHR*RCKDRRRWRQP Trigger: GGGCTGCCTCCACCTCCTCCGATCCTTACACCGCCACCTGTGAATCTTAGACCCCCTGTGCCACCTCCCGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS GCA 72 bp | TCACCAGGTCCCTTTCCCTGCTCCGCGTCCTGCTTCTaGTCCTCGTTCTGCTCCTATCTCTATCCCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPGPFPCSASCF*SSFCSYLYPCH Trigger: GTGACAGGGATAGAGATAGGAGCAGAACGAGGAGCAGAAGCAGGACGCGGAGCAGGGAAAGGGACCTGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS TCA 72 bp | TCTGTAAATGCAGAAATCTCCAGTGCTCGGGGTCGGTaGTCCACTACAGCATGCCCAGGCACACCTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVNAEISSARGR*STTACPGTPRP Trigger: AGGCCGAGGTGTGCCTGGGCATGCTGTAGTGGATCACCGACCCCGAGCACTGGAGATTTCTGCATTTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CCA 72 bp | TACTACAGTAGGGACAGAGCTGGTCGCAGAGTTAGGTaGCGCATCCATGCCAGACGGCTGCAAAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YYSRDRAGRRVR*RIHARRLQRRK Trigger: CTTCCTCCTTTGCAGCCGTCTGGCATGGATGCGCCACCTAACTCTGCGACCAGCTCTGTCCCTACTGTAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CAA 90 bp | CTCGGCCTCTACCCCTGCCCCGGCCGTGAGCTGTACCTCGACCTCTaGTATGAATTCCTCTACCTCGGCCAGATGAAAGAATTCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLYPCPGRELYLDL*YEFLYLGQMKEFLF Trigger: AAAGAGGAATTCTTTCATCTGGCCGAGGTAGAGGAATTCATACAAGAGGTCGAGGTACAGCTCACGGCCGGGGCAGGGGTAGAGGCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CAA 72 bp | TACCCCTGCCCCGGCCGTGAGCTGTACCTCGACCTCTaGTATGAATTCCTCTACCTCGGCCAGATGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YPCPGRELYLDL*YEFLYLGQMKE Trigger: TTCTTTCATCTGGCCGAGGTAGAGGAATTCATACAAGAGGTCGAGGTACAGCTCACGGCCGGGGCAGGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CAA 90 bp | GGTTCAGCTTCTTCAGTGTCCACAGCTGACATGTTAGCTATTGGTTaGTTCCAGGCCAGCTTCAAATCCTGCCCTTTGAAGCGAGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSASSVSTADMLAIG*FQASFKSCPLKRAP Trigger: CGGCGCTCGCTTCAAAGGGCAGGATTTGAAGCTGGCCTGGAACAAACCAATAGCTAACATGTCAGCTGTGGACACTGAAGAAGCTGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CAA 90 bp | TCTGCTGGCTCTGTTGTAGCTGATGGTACAGGACCCAGCCGCTCTTaGACTGACTGCTTCACAACAGGTAAAATGGGCTGCTGGACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SAGSVVADGTGPSRS*TDCFTTGKMGCWTK Trigger: TTTAGTCCAGCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAAAGAGCGGCTGGGTCCTGTACCATCAGCTACAACAGAGCCAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS GCA 72 bp | CTTCAACAACAGGTGGCTGAGCTGGGAAAGGCAGCATaGCTGGCAGATTCACATCTTCTACAACTACTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LQQQVAELGKAA*LADSHLLQLLG Trigger: ACCCAGTAGTTGTAGAAGATGTGAATCTGCCAGGCATGCTGCCTTTCCCAGCTCAGCCACCTGTTGTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS GCA 72 bp | TTCTCTATCACTCTCTGTAAATGCAGAAATCTCCAGTaGTCGGGGTCGGTGATCCACTACAGCATGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSITLCKCRNLQ*SGSVIHYSMPR Trigger: CCTGGGCATGCTGTAGTGGATCACCGACCCCGAGCACTGGAGATTTCTGCATTTACAGAGAGTGATAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CAA 72 bp | TCTGTTGTAGCTGATGGTACAGGACCCAGCCGCTCTTaGACTGACTGCTTCACAACAGGTAAAATGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVADGTGPSRS*TDCFTTGKMGC Trigger: GCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAAAGAGCGGCTGGGTCCTGTACCATCAGCTACAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS TCA 72 bp | CTCATCACGGCTTCTATTATCTCTGTATCGGGAGCTTaGCTGGGGAGGGCTGTGATTCAACCTTCTGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LITASIISVSGA*LGRAVIQPSGK Trigger: TTTTCCAGAAGGTTGAATCACAGCCCTCCCCAGTCAAGCTCCCGATACAGAGATAATAGAAGCCGTGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS GCA 72 bp | CCCTTTGAAGCGAGCGCCGTGAATTGCAGCTGCTTCTaGTTCTGCTCTTGTCTTGAATGTGATTATTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PFEASAVNCSCF*FCSCLECDYCM Trigger: CATGCAATAATCACATTCAAGACAAGAGCAGAAGCAGAAGCAGCTGCAATTCACGGCGCTCGCTTCAAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS TCA 72 bp | CTCTTCATCAGGTTCAGCTTCTTCAGTGTCCACAGCTaGCATGTTAGCTATTGGTTTGTTCCAGGCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFIRFSFFSVHS*HVSYWFVPGQL Trigger: AAGCTGGCCTGGAACAAACCAATAGCTAACATGTCAGCTGTGGACACTGAAGAAGCTGAACCTGATGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CAA 72 bp | TCTTCAGTGTCCACAGCTGACATGTTAGCTATTGGTTaGTTCCAGGCCAGCTTCAAATCCTGCCCTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSVSTADMLAIG*FQASFKSCPLK Trigger: CTTCAAAGGGCAGGATTTGAAGCTGGCCTGGAACAAACCAATAGCTAACATGTCAGCTGTGGACACTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 ENSMUST00000172122.8 |
||
| CDS CAA 90 bp | TCTCTGGGTGGTAAATCCATGTCACCTGATGTTAGTCCTATCAAGTaGGGCCTTTGTGCATGGACTCTGTGTCTATACATAGGTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLGGKSMSPDVSPIK*GLCAWTLCLYIGLE Trigger: TTCCAGACCTATGTATAGACACAGAGTCCATGCACAAAGGCCCAACTTGATAGGACTAACATCAGGTGACATGGATTTACCACCCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS TCA 72 bp | ACTTCTCCCTCGCCTTCTGTTATACCGGTCTCTATATaGATCTCTTCGAGGAGGGTTTCGATCATAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSPSPSVIPVSI*ISSRRVSIIIS Trigger: AGAGATTATGATCGAAACCCTCCTCGAAGAGATTCATATAGAGACCGGTATAACAGAAGGCGAGGGAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 72 bp | CCTGATGTTAGTCCTATCAAGTTGGGCCTTTGTGCATaGACTCTGTGTCTATACATAGGTCTGGAAGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PDVSPIKLGLCA*TLCLYIGLEVF Trigger: AAACACTTCCAGACCTATGTATAGACACAGAGTCCATGCACAAAGGCCCAACTTGATAGGACTAACATCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 72 bp | TTGACTGACTGCTTCACAACAGGTAAAATGGGCTGCTaGACTAAAGGCTTTGGTGAAGTAGTTTGTAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTDCFTTGKMGC*TKGFGEVVCNC Trigger: GCAGTTACAAACTACTTCACCAAAGCCTTTAGTCCAGCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163545.8 |
||
| CDS CAA 90 bp | CTCTCATACAGAACCCCTTTTCATCATAATCTCTACACCGTTTCTTaGGCATTGGTGGCCTTACATAAGAGTTGTGATCCACCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSYRTPFHHNLYTVS*ALVALHKSCDPPGL Trigger: AAGACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAGGGGTTCTGTATGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS TCA 72 bp | AGATTCACATCTTCTACAACTACTGGGTCGCTTCCATaGTCAAAAGGACACATGTCTCCTCTCATACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RFTSSTTTGSLP*SKGHMSPLIQN Trigger: GTTCTGTATGAGAGGAGACATGTGTCCTTTTGATCATGGAAGCGACCCAGTAGTTGTAGAAGATGTGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS GCA 72 bp | TCTTTGACTGACTGCTTCACAACAGGTAAAATGGGCTaGTGGACTAAAGGCTGTATTACCTTTGGTGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLTDCFTTGKMG*WTKGCITFGEV Trigger: TACTTCACCAAAGGTAATACAGCCTTTAGTCCAGCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 |
||
| CDS CCA 72 bp | TTCATCATAATCTCTACACCGTTTCTTTGGCATTGGTaGCCTTACATAAGAGTTGTGATCCACCTGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FIIISTPFLWHW*PYIRVVIHLVF Trigger: GAAGACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 72 bp | CTTTTCATCATAATCTCTACACCGTTTCTTTGGCATTaGTGGCCTTACATAAGAGTTGTGATCCACCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LFIIISTPFLWH*WPYIRVVIHLV Trigger: GACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 72 bp | GAACCCCTTTTCATCATAATCTCTACACCGTTTCTTTaGCATTGGTGGCCTTACATAAGAGTTGTGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EPLFIIISTPFL*HWWPYIRVVIH Trigger: GTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAGGGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CCA 72 bp | TTGACTGACTGCTTCACAACAGGTAAAATGGGCTGCTaGACTAAAGGCTGTATTACCTTTGGTGAAGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LTDCFTTGKMGC*TKGCITFGEVV Trigger: AACTACTTCACCAAAGGTAATACAGCCTTTAGTCCAGCAGCCCATTTTACCTGTTGTGAAGCAGTCAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 |
||
| CDS CAA 72 bp | GGTAAATCCATGTCACCTGATGTTAGTCCTATCAAGTaGGGCCTTTGTGCATGGACTCTGTGTCTATACATA | + |
|
Preference number: 6 (lower is better) Translates to: GKSMSPDVSPIK*GLCAWTLCLYI Trigger: TATGTATAGACACAGAGTCCATGCACAAAGGCCCAACTTGATAGGACTAACATCAGGTGACATGGATTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CAA 90 bp | TACAGAACCCCTTTTCATCATAATCTCTACACCGTTTCTTTGGCATaGGTGGCCTTACATAAGAGTTGTGATCCACCTGGTCTTCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: YRTPFHHNLYTVSLA*VALHKSCDPPGLHE Trigger: TTCATGAAGACCAGGTGGATCACAACTCTTATGTAAGGCCACCAATGCCAAAGAAACGGTGTAGAGATTATGATGAAAAGGGGTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||
| CDS CAA 90 bp | GCAACCTGTAAGTTAACCAATGTTCCAAATCGACTAAAATGTTCATaGAGTTTGCTGATGTTATTTAATTCTGGAGGAACCTTCCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ATCKLTNVPNRLKCS*SLLMLFNSGGTFRS Trigger: ACTTCGGAAGGTTCCTCCAGAATTAAATAACATCAGCAAACTCAATGAACATTTTAGTCGATTTGGAACATTGGTTAACTTACAGGTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022715.14 ENSMUST00000100327.10 ENSMUST00000163499.2 ENSMUST00000163545.8 |
||