Pregenerated sensors for RBM25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010608Ensembl transcript IDs: ENSMUST00000048155.16, ENSMUST00000181983.8, ENSMUST00000182004.8, ENSMUST00000182036.8, ENSMUST00000182450.8, ENSMUST00000182618.8, ENSMUST00000182633.8, ENSMUST00000183154.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGCCTCTTGTTCCATCCTCTGGAGCTCTGCATCTGGATCTGGATaGCCTTCTGCCAGTAAGCGCTGCCTGATTTCCTCAAGCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SASCSILWSSASGSG*PSASKRCLISSSSS Trigger: GGAAGAGCTTGAGGAAATCAGGCAGCGCTTACTGGCAGAAGGGCATCCAGATCCAGATGCAGAGCTCCAGAGGATGGAACAAGAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR GCA 90 bp | CTTCTTCTTCCTCGGATTCTGGTTCTTGCTTTATTTGAGGTTGCCTaGGCCTCTCAGCCTCTTGTTCCATCCTCTGGAGCTCTGCATCTG | + |
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Preference number: 1 (lower is better) Translates to: LLLPRILVLALFEVA*ASQPLVPSSGALHL Trigger: CAGATGCAGAGCTCCAGAGGATGGAACAAGAGGCTGAGAGGCGCAGGCAACCTCAAATAAAGCAAGAACCAGAATCCGAGGAAGAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR CCA 90 bp | AATAGCATTTATATCCTCCTTGGTGATGAGTGGGTAAGGGATCAATaGGGCCACTGGAAATCTACGGAAAATGTCCTCCTTCTTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: NSIYILLGDEWVRDQ*GHWKSTENVLLLFL Trigger: AAGGAAAAGAAGGAGGACATTTTCCGTAGATTTCCAGTGGCCCCATTGATCCCTTACCCACTCATCACCAAGGAGGATATAAATGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
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| 3UTR TCA 90 bp | CACTCTAATTTTAAACTCCATGCCTTTACAAGGGCTTGCCATTTCTaGTCAGGAAAGTGGGAACGAGGCTGTAAGGGTATGACTAGTATT | + |
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Preference number: 1 (lower is better) Translates to: HSNFKLHAFTRACHF*SGKWERGCKGMTSI Trigger: AATACTAGTCATACCCTTACAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGGAGTTTAAAATTAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR GCA 90 bp | TATCATCCTATACACAGAAGAACACAAAACTGGTCAGCAGTGTGTTaGTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTAT | + |
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Preference number: 1 (lower is better) Translates to: YHPIHRRTQNWSAVC*SQQNTSLWKIHRNY Trigger: ATAATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTGACCAGTTTTGTGTTCTTCTGTGTATAGGATGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR GCA 90 bp | ACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTTaGACTCTAATTTTAAACTCCATGCCTTTACAAGGGCTTGCCATT | + |
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Preference number: 1 (lower is better) Translates to: TLIQRYIRKDLSARF*TLILNSMPLQGLAI Trigger: AATGGCAAGCCCTTGTAAAGGCATGGAGTTTAAAATTAGAGTGCAAAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CCA 90 bp | ACCAGTCTCTGGAAAATACACCGTAATTATCCTAGGTATTTGGGTTaGCACAATTATCACTTTTCCTTTATGTGTGCATTGATGATTACG | + |
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Preference number: 1 (lower is better) Translates to: TSLWKIHRNYPRYLG*HNYHFSFMCALMIT Trigger: CGTAATCATCAATGCACACATAAAGGAAAAGTGATAATTGTGCCAACCCAAATACCTAGGATAATTACGGTGTATTTTCCAGAGACTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CAA 90 bp | TGGGGCAGAGCTGATGGGTCTCAAAGTCGGCTTGAGACAAGGCTTTaGCTCTGGTTCTTCCTCCTCTTCCACAGGCTCCTCTCGTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: WGRADGSQSRLETRL*LWFFLLFHRLLSFF Trigger: GAAAAACGAGAGGAGCCTGTGGAAGAGGAGGAAGAACCAGAGCAAAAGCCTTGTCTCAAGCCGACTTTGAGACCCATCAGCTCTGCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR CAA 90 bp | TTCTTCTTCTTCTTCCTCGGATTCTGGTTCTTGCTTTATTTGAGGTaGCCTGCGCCTCTCAGCCTCTTGTTCCATCCTCTGGAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FFFFFLGFWFLLYLR*PAPLSLLFHPLELC Trigger: GCAGAGCTCCAGAGGATGGAACAAGAGGCTGAGAGGCGCAGGCAACCTCAAATAAAGCAAGAACCAGAATCCGAGGAAGAAGAAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGACCACACCTAATTTCTTaGCAGAGCTGTTTAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRPHLIS*QSCLEL Trigger: AAGTTCTAAACAGCTCTGTCAAGAAATTAGGTGTGG...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGAATCAGCAGAACAAGATaGTATCAGATAGGCTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRISRTR*YQIGCV Trigger: TACACAGCCTATCTGATAGCATCTTGTTCTGCTGAT...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048155.16 ENSMUST00000182450.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGATCGACTCCGATCCTTATTTCGATCTGAGCTCCGTTCTCGATCTCGGTCCTACAAGTGTTTTCTCTaGCAAGTTAACCTTGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LDRLRSLFRSELRSRSRSYKCFL*QVNLVQ Trigger: CTGGACAAGGTTAACTTGCCAGAGAAAACACTTGTA...GGACCGAGATCGAGAACGGAGCTCAGATCGAAATAAGGATCGGAGTCGATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCGTTCCATCAGTATAGAATCCACAATAGACCAATCCAAAGGATAAGCAAATGTTGGGGGTTGCGTTaGCACTGGCAGAGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: SSFHQYRIHNRPIQRISKCWGLR*HWQRTQ Trigger: CTGTGTCCTCTGCCAGTGGCAACGCAACCCCCAACA...TTTGCTTATCCTTTGGATTGGTCTATTGTGGATTCTATACTGATGGAACGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGACTATTGGAAGCACCCAATTTAAGGCTTAGTCCTATTTTTGGCCTATGCTCTTGTTCCATCCTCTaGAGCTCTGCATCTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: PGLLEAPNLRLSPIFGLCSCSIL*SSASGS Trigger: AGATCCAGATGCAGAGCTCCAGAGGATGGAACAAGA...GCATAGGCCAAAAATAGGACTAAGCCTTAAATTGGGTGCTTCCAATAGTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGGATTCTGGTTCTTGCTTTATTTGAGGTTGCCTGCGCCTCTCAGCCTCTTGGGGCATTTAGTTCACTaGAATATTCTCGGATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGFWFLLYLRLPAPLSLLGHLVH*NILGLK Trigger: TTTTAATCCGAGAATATTCCAGTGAACTAAATGCCC...CAAGAGGCTGAGAGGCGCAGGCAACCTCAAATAAAGCAAGAACCAGAATCCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCGTTCCATCAGTATAGAATCCACAATAGACCAATCCAAAGGATAAGCAAACCAGTAAGCGCTGCCTaGTTTCCTCAAGCTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SSFHQYRIHNRPIQRISKPVSAA*FPQALP Trigger: AGGAAGAGCTTGAGGAAATCAGGCAGCGCTTACTGG...TTTGCTTATCCTTTGGATTGGTCTATTGTGGATTCTATACTGATGGAACGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGTTTCTTGTGTGTATCTCTGAATTTGCTGATCTCTCGGGATATCAAACACACCAGTAGTCTGTaGCTGGTGAGCATAAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSSFLCVSLNLLISRDIKHTSSL*LVSIKR Trigger: CCTCTTTATGCTCACCAGGCACAGACTACTGGTGTG...TTTGATATCCCGAGAGATCAGCAAATTCAGAGATACACACAAGAAACTGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTCTTTTTCCCTATCACGCAACCGTTTCTGAAGAGCACTACCCCTGTAGCCCCTTTAATCATCTaGTCTCTTCGCTTTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FHFFFPITQPFLKSTTPVAPLII*SLRFVS Trigger: AGAAACAAAGCGAAGAGACCAGATGATTAAAGGGGC...TACAGGGGTAGTGCTCTTCAGAAACGGTTGCGTGATAGGGAAAAAGAAATGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR GCA 90 bp | CACATAAACACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTCACACCAGTAGTCTGTaGCTGGTGAGCATAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HINTLIQRYIRKDLSARFHTSSL*LVSIKR Trigger: CCTCTTTATGCTCACCAGGCACAGACTACTGGTGTG...AAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGTGTTTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTATCAGCAGAACAAGATaGTATCAGATAGGCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: QQCVAHSRIPVSGKYTVIISRTR*YQIGCV Trigger: TACACAGCCTATCTGATAGCATCTTGTTCTGCTGAT...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR-3UTR CCA 90 bp | GTATCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCGCCCCTTTAATCATCTaGTCTCTTCGCTTTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSLNLLISRDIKSLLSSSAPLII*SLRFVS Trigger: AGAAACAAAGCGAAGAGACCAGATGATTAAAGGGGC...GGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCGTTCCATCAGTATAGAATCCACAATAGACCAATCCAAAGGATAAGCAAATTTCTTTCTCTTCACTaGATTAGGTTGGCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: SSFHQYRIHNRPIQRISKFLSLH*IRLART Trigger: AGTCCTGGCCAACCTAATTCAGTGAAGAGAAAGAAA...TTTGCTTATCCTTTGGATTGGTCTATTGTGGATTCTATACTGATGGAACGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR CAA 90 bp | CAGAATACCAGTCTCTGGAAAATACACCGTAATTATCCTAGGTATTaGGGTTGGCACAATTATCACTTTTCCTTTATGTGTGCATTGATG | + |
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Preference number: 2 (lower is better) Translates to: QNTSLWKIHRNYPRY*GWHNYHFSFMCALM Trigger: CATCAATGCACACATAAAGGAAAAGTGATAATTGTGCCAACCCAAATACCTAGGATAATTACGGTGTATTTTCCAGAGACTGGTATTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CAA 90 bp | ACTAATGTAGCTTCTTCTTCACCTATGTATTCGATGATTTTCTTATaGATCCATGGCCGGATTCTTCGTTCCATCAGTATAGAATCCACA | + |
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Preference number: 2 (lower is better) Translates to: TNVASSSPMYSMIFL*IHGRILRSISIEST Trigger: TGTGGATTCTATACTGATGGAACGAAGAATCCGGCCATGGATCAATAAGAAAATCATCGAATACATAGGTGAAGAAGAAGCTACATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCATGGCGTTTTACAAAGCTaGCTTAATGAATTAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ISEFADLSGYQISFVFFHGVLQS*LNELAL Trigger: CAGAGCTAATTCATTAAGGCAGCTTTGTAAAACGCC...ATGGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCGTTCCATCAGTATAGAATCCACAATAGACCAATCCAAAGGATAAGCAAATTACAGTGCCTTTGGTaGCATTTTTATCATCTTCGC | + |
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Preference number: 2 (lower is better) Translates to: SSFHQYRIHNRPIQRISKLQCLW*HFYHLR Trigger: GCGAAGATGATAAAAATGCCACCAAAGGCACTGTAA...TTTGCTTATCCTTTGGATTGGTCTATTGTGGATTCTATACTGATGGAACGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR TCA 72 bp | CTGGATCTGGATGCCCTTCTGCCAGTAAGCGCTGCCTaGTTTCCTCAAGCTCTTCCTTCTCTCTCTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LDLDALLPVSAA*FPQALPSLSSC Trigger: ACAGGAAGAGAGAGAAGGAAGAGCTTGAGGAAATCAGGCAGCGCTTACTGGCAGAAGGGCATCCAGATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGATTGCTTTATTTGAGGTaGCCTGCGCCTCTCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRLLYLR*PAPLSL Trigger: GAGGCTGAGAGGCGCAGGCAACCTCAAATAAAGCAA...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGAGGTCTCAAAGTCGGCTaGAGACAAGGCTTTTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRGLKVG*RQGFCS Trigger: AGAGCAAAAGCCTTGTCTCAAGCCGACTTTGAGACC...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGACTATTGGAAGCACCCAATTTAAGGCTTAGTCCTATTTTTGGCCTATGCGTGTTGGGGGTTGCGTaGCCACTGGCAGAGGACACA | + |
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Preference number: 3 (lower is better) Translates to: PGLLEAPNLRLSPIFGLCVLGVA*PLAEDT Trigger: TGTGTCCTCTGCCAGTGGCAACGCAACCCCCAACAC...GCATAGGCCAAAAATAGGACTAAGCCTTAAATTGGGTGCTTCCAATAGTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR CCA 72 bp | GTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATaGCTTTACACCCGAGTGAGTACACAGAGCATCAAC | + |
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Preference number: 3 (lower is better) Translates to: VPGEHKEDQGHR*LYTRVSTQSIN Trigger: GTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048155.16 ENSMUST00000182450.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTGGGGTGAGAGTCAGACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTTCTGGCAAGTTAACCTaGTCCAGCCTCCCTTACTAC | + |
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Preference number: 3 (lower is better) Translates to: FWGESQTPVRGHLVHWNISGKLT*SSLPYY Trigger: GTAGTAAGGGAGGCTGGACAAGGTTAACTTGCCAGA...AATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTCTGACTCTCACCCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CAA 90 bp | GGTTGGCCAGGACTATTGGAAGCACCCAATTTAAGGCTTAGTCCTATTTTTGGCTGGTTCTTGCTTTATTaGAGGTTGCCTGCGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GWPGLLEAPNLRLSPIFGWFLLY*RLPAPL Trigger: GAGAGGCGCAGGCAACCTCAAATAAAGCAAGAACCA...GCCAAAAATAGGACTAAGCCTTAAATTGGGTGCTTCCAATAGTCCTGGCCAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCCTGGTCAGCAGTGTGTaGCTCACAGCAGAATACCAG | + |
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Preference number: 3 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPLVSSV*LTAEYQ Trigger: CTGGTATTCTGCTGTGAGCAACACACTGCTGACCAG...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGATTATTCACTTCTTTATaGGTACGGGGAATAGAACCC | + |
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Preference number: 3 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRLFTSL*VRGIEP Trigger: GGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAA...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR TCA 72 bp | TTTAAACTCCATGCCTTTACAAGGGCTTGCCATTTCTaGTCAGGAAAGTGGGAACGAGGCTGTAAGGGTATG | + |
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Preference number: 3 (lower is better) Translates to: FKLHAFTRACHF*SGKWERGCKGM Trigger: CATACCCTTACAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGGAGTTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACTGCCTTTACAAGGGCTaGCCATTTCTGATCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHCLYKG*PFLIRK Trigger: TTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCA...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CCA 72 bp | TCAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTaGAAAATACACCGTAATTATCCTAGGTATTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SAVCCSQQNTSL*KIHRNYPRYLG Trigger: ACCCAAATACCTAGGATAATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CCA 72 bp | AGCTCTGATTGGAATAGTCTGTACAAGTGTTTTCTCTaGCAAGTTAACCTTGTCCAGCCTCCCTTACTACTT | + |
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Preference number: 3 (lower is better) Translates to: SSDWNSLYKCFL*QVNLVQPPLLL Trigger: AAGTAGTAAGGGAGGCTGGACAAGGTTAACTTGCCAGAGAAAACACTTGTACAGACTATTCCAATCAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR GCA 72 bp | CAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTTaGACTCTAATTTTAAACTCCATGCCTTTACAAGGG | + |
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Preference number: 3 (lower is better) Translates to: QRYIRKDLSARF*TLILNSMPLQG Trigger: CCCTTGTAAAGGCATGGAGTTTAAAATTAGAGTGCAAAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR TCA 72 bp | ATTCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATaGTGTATCATCCTATACACAGAAGAACACAAAACT | + |
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Preference number: 3 (lower is better) Translates to: ILSHQVEGGIRL*CIILYTEEHKT Trigger: AGTTTTGTGTTCTTCTGTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCATTTCTGGTCTCTTCGCTTaGTTTCTTCATCTAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SLNLLISRDIKSLLSSSISGLFA*FLHLRL Trigger: AAGCCTTAGATGAAGAAACAAAGCGAAGAGACCAGA...AATGGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| 3UTR TCA 72 bp | AGTAAGCAAACATGGCAGCAGCCACACCTAATTTCTTaGCAGAGCTGTTTAGAACTTGGTACTTTTCAAATA | + |
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Preference number: 3 (lower is better) Translates to: SKQTWQQPHLIS*QSCLELGTFQI Trigger: TATTTGAAAAGTACCAAGTTCTAAACAGCTCTGTCAAGAAATTAGGTGTGGCTGCTGCCATGTTTGCTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CCA 72 bp | TGGAAAATACACCGTAATTATCCTAGGTATTTGGGTTaGCACAATTATCACTTTTCCTTTATGTGTGCATTG | + |
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Preference number: 3 (lower is better) Translates to: WKIHRNYPRYLG*HNYHFSFMCAL Trigger: CAATGCACACATAAAGGAAAAGTGATAATTGTGCCAACCCAAATACCTAGGATAATTACGGTGTATTTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CCA 90 bp | ATCCTCTGGAGCTCTGCATCTGGATCTGGATGCCCTTCTGCCAGTAAGCGCTGCTGGGGGTGGGATCCCTaGAGGGAGAGCTGGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: ILWSSASGSGCPSASKRCWGWDP*RESWDS Trigger: GGAATCCCAGCTCTCCCTCCAGGGATCCCACCCCCA...GCAGCGCTTACTGGCAGAAGGGCATCCAGATCCAGATGCAGAGCTCCAGAGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| CDS-3UTR CCA 90 bp | ATCCTCTGGAGCTCTGCATCTGGATCTGGATGCCCTTCTGCCAGTAAGCGCTGCAAAGCCAGGAAACTGTaGGGGTGGGATCCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILWSSASGSGCPSASKRCKARKL*GWDPWR Trigger: CCTCCAGGGATCCCACCCCCACAGTTTCCTGGCTTT...GCAGCGCTTACTGGCAGAAGGGCATCCAGATCCAGATGCAGAGCTCCAGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| CDS-3UTR GCA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGGCATCTGGATCTGGATaGCCTTCTGCCAGTAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLASGSG*PSASKR Trigger: GCGCTTACTGGCAGAAGGGCATCCAGATCCAGATGC...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACTGGGGGTGGGATCCCTaGAGGGAGAGCTGGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDWGWDP*RESWDS Trigger: GGAATCCCAGCTCTCCCTCCAGGGATCCCACCCCCA...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048155.16 ENSMUST00000182450.8 |
||
| 3UTR CAA 72 bp | ACAGATGGGGCAGAGCTGATGGGTCTCAAAGTCGGCTaGAGACAAGGCTTTTGCTCTGGTTCTTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGAELMGLKVG*RQGFCSGSSSS Trigger: AGAGGAGGAAGAACCAGAGCAAAAGCCTTGTCTCAAGCCGACTTTGAGACCCATCAGCTCTGCCCCATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACGGGTTGCGTTGCCACTaGCAGAGGACACAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDGLRCH*QRTQMG Trigger: CCCCATCTGTGTCCTCTGCCAGTGGCAACGCAACCC...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACCATCCCCAGGAGTGTTaGGGGTTGCGTTGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDHPQEC*GLRCHW Trigger: CCAGTGGCAACGCAACCCCCAACACTCCTGGGGATG...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | CTCGGATTCTGGTTCTTGCTTTATTTGAGGTTGCCTGCGCCTCTCAGCCTCTTGTTTCTGGCTCCCAAATaGTTTCCAACCATGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: LGFWFLLYLRLPAPLSLLFLAPK*FPTMDT Trigger: CGTGTCCATGGTTGGAAAGCATTTGGGAGCCAGAAA...CAAGAGGCTGAGAGGCGCAGGCAACCTCAAATAAAGCAAGAACCAGAATCCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTTGTTGGGGGTTGCGTTaGCACTGGCAGAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: QQCVAHSRIPVSGKYTVICWGLR*HWQRTQ Trigger: CTGTGTCCTCTGCCAGTGGCAACGCAACCCCCAACA...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACAGGAGTGTTGGGGGTTaGGTTGCCACTGGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHRSVGG*VATGRG Trigger: TCCTCTGCCAGTGGCAACGCAACCCCCAACACTCCT...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | GGTGAGAGTCAGACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTTCTGGCTCCCAAATaGTTTCCAACCATGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: GESQTPVRGHLVHWNILGFLAPK*FPTMDT Trigger: CGTGTCCATGGTTGGAAAGCATTTGGGAGCCAGAAA...TCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTCTGACTCTCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR GCA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGTTGAGACAAGGCTTTTaGTCTGGTTCTTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLLRQGF*SGSSSS Trigger: AGAGGAGGAAGAACCAGAGCAAAAGCCTTGTCTCAA...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCAAAGCCAGGAAACTGTaGGGGTGGGATCCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPKARKL*GWDPWR Trigger: CCTCCAGGGATCCCACCCCCACAGTTTCCTGGCTTT...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACCCCTGGAGGTACTGGTaGAGGAAAGCCAGGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHPWRYW*RKARKL Trigger: CAGTTTCCTGGCTTTCCTCCACCAGTACCTCCAGGG...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGCTGGATGATCCTTTCTaGCTCCCAAATGCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLLDDPF*LPNAFQ Trigger: TTGGAAAGCATTTGGGAGCCAGAAAGGATCATCCAG...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGAAATTTTAAGCCTGGATaGTCCTTTCTGGCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRNFKPG*SFLAPK Trigger: TTTGGGAGCCAGAAAGGATCATCCAGGCTTAAAATT...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048155.16 ENSMUST00000182450.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGGGCAGAGCTGATGGGTCTCAAAGTCGGCTTGAGACAAGGCTTTTGCTTCTTCTCTCCAATCTaGAGGTCATGCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGAELMGLKVGLRQGFCFFSPI*RSCNNL Trigger: CAGATTATTGCATGACCTTCAGATTGGAGAGAAGAA...GCAAAAGCCTTGTCTCAAGCCGACTTTGAGACCCATCAGCTCTGCCCCATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTCCAGTAAGCGCTGCCTaGTTTCCTCAAGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQCVAHSRIPVSGKYTVIPVSAA*FPQALP Trigger: AGGAAGAGCTTGAGGAAATCAGGCAGCGCTTACTGG...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGATTTCTTTCTCTTCACTaGATTAGGTTGGCCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRFLSLH*IRLART Trigger: AGTCCTGGCCAACCTAATTCAGTGAAGAGAAAGAAA...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACTCTGCCAGTAAGCGCTaGCTGATTTCCTCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDSASKR*LISSSS Trigger: AGAGCTTGAGGAAATCAGGCAGCGCTTACTGGCAGA...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTGAGCTGGGATTCCCATaGGAGGGCGATTCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQCVAHSRIPVSGKYTVIELGFP*EGDSNE Trigger: CTCATTTGAATCGCCCTCCCATGGGAATCCCAGCTC...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGGCCCCTTTAATCATCTaGTCTCTTCGCTTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLAPLII*SLRFVS Trigger: AGAAACAAAGCGAAGAGACCAGATGATTAAAGGGGC...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGGTGAGAGTCAGACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTGAAAGACATTCTGACTaGACCAGTCCAAAGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FWGESQTPVRGHLVHWNIERHSD*TSPKEL Trigger: CAACTCCTTTGGACTGGTGCAGTCAGAATGTCTTTC...AATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTCTGACTCTCACCCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTAAAAGAGCTGGGATTCCCATaGGAGGGCGATTCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQTPVRGHLVHWNILGLKELGFP*EGDSNE Trigger: CTCATTTGAATCGCCCTCCCATGGGAATCCCAGCTC...TTTTAATCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTCTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | GTATCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCAAAGCCAGGAAACTGTaGGGGTGGGATCCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLNLLISRDIKSLLSSSKARKL*GWDPWR Trigger: CCTCCAGGGATCCCACCCCCACAGTTTCCTGGCTTT...GGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGTTCTTCCTCGGATTCTaGTTCTTGCTTTATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLFFLGF*FLLYLR Trigger: CCTCAAATAAAGCAAGAACCAGAATCCGAGGAAGAA...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTAAAACTTCAATGGGGGGAAAGACATTCTaGCTGCACCAGTCCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCEGAFSSLEYSRIKTSMGGKTF*LHQSKG Trigger: TCCTTTGGACTGGTGCAGTCAGAATGTCTTTCCCCC...CATTGAAGTTTTAATCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000182633.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACTTTCTGGCTCCCAAATaGTTTCCAACCATGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHFLAPK*FPTMDT Trigger: CGTGTCCATGGTTGGAAAGCATTTGGGAGCCAGAAA...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCTTCCCAGAAGCACCTTaGACTCTCTTCCAGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPFPEAP*TLFQLN Trigger: GTTGAGCTGGAAGAGAGTGCAAGGTGCTTCTGGGAA...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTAAAACTTCAATGGAGCTGGGATTCCCATaGGAGGGCGATTCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCEGAFSSLEYSRIKTSMELGFP*EGDSNE Trigger: CTCATTTGAATCGCCCTCCCATGGGAATCCCAGCTC...CATTGAAGTTTTAATCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAGTTTCTTGTGTGTATCTCTGAATTTGCTGATCTCTCGGGATATCAAACCCTGGAGGTACTGGTaGAGGAAAGCCAGGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSFLCVSLNLLISRDIKPWRYW*RKARKL Trigger: CAGTTTCCTGGCTTTCCTCCACCAGTACCTCCAGGG...TTTGATATCCCGAGAGATCAGCAAATTCAGAGATACACACAAGAAACTGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | GTATCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCCCCTGGAGGTACTGGTaGAGGAAAGCCAGGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLNLLISRDIKSLLSSSPWRYW*RKARKL Trigger: CAGTTTCCTGGCTTTCCTCCACCAGTACCTCCAGGG...GGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACTCTTGTTCCATCCTCTaGAGCTCTGCATCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHSCSIL*SSASGS Trigger: AGATCCAGATGCAGAGCTCCAGAGGATGGAACAAGA...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTAAACCAGTCCAAAGGAGTTaGCAAAGACCCTCTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESDSCEGAFSSLEYSRIKPVQRS*QRPSFL Trigger: GAGAAAAGAGGGTCTTTGCCAACTCCTTTGGACTGG...TTTAATCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTCTGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182633.8 |
||
| CDS-3UTR TCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACCAAAATCCAAAAGCTTaGAGTTTCCCAGAAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDQNPKA*SFPEAP Trigger: AGGTGCTTCTGGGAAACTTCAAGCTTTTGGATTTTG...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGATTTTCTTCGTTCATATaGATCTTCTTCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRFSSFI*IFFILF Trigger: GAAGAGGATGAAGAAGATGCATATGAACGAAGAAAA...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTAAACTGGATGATCCTTTCTaGCTCCCAAATGCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESDSCEGAFSSLEYSRIKLDDPF*LPNAFQ Trigger: TTGGAAAGCATTTGGGAGCCAGAAAGGATCATCCAG...TTTAATCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTCTGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTCCTTTTTCTTCTTTCTaGGGTGAGAGTCAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQCVAHSRIPVSGKYTVIPFSSF*GESQTP Trigger: AGGAGTCTGACTCTCACCCCAGAAAGAAGAAAAAGG...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CACATAAACACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTCTGGAGCTCTGCATCTaGATCTGGATGCCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HINTLIQRYIRKDLSARFLELCI*IWMPFC Trigger: GCAGAAGGGCATCCAGATCCAGATGCAGAGCTCCAG...AAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGTGTTTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | ATCAGCTTCCATTTCTTTTTCCCTATCACGCAACCGTTTCTGAAGAGCACTACCAATTTTAAGCCTGGATaGTCCTTTCTGGCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISFHFFFPITQPFLKSTTNFKPG*SFLAPK Trigger: TTTGGGAGCCAGAAAGGATCATCCAGGCTTAAAATT...GGTAGTGCTCTTCAGAAACGGTTGCGTGATAGGGAAAAAGAAATGGAAGCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACAGCCATAATACTCATTaGTACAGGAATCATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDSHNTH*YRNHRC Trigger: ACACCGATGATTCCTGTACCAATGAGTATTATGGCT...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048155.16 ENSMUST00000182450.8 |
||
| CDS-3UTR TCA 90 bp | CACATAAACACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTGTCTCAAAGTCGGCTTaGGACAAGGCTTTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HINTLIQRYIRKDLSARFVSKSA*DKAFAL Trigger: CAGAGCAAAAGCCTTGTCTCAAGCCGACTTTGAGAC...AAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGTGTTTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR GCA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACCAACATCATCTAAAATaGTCTGTGGTGAACTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRWLYTRVSTQSINKLEDQHHLK*SVVNYV Trigger: CACATAGTTCACCACAGAGCATTTTAGATGATGTTG...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTAGCCATAATACTCATTaGTACAGGAATCATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQCVAHSRIPVSGKYTVISHNTH*YRNHRC Trigger: ACACCGATGATTCCTGTACCAATGAGTATTATGGCT...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTCCAGTTTCTTGTGTGTATCTCTGAATTTGCTGATCTCTCGGGATATCCTGGATGATCCTTTCTaGCTCCCAAATGCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSFLCVSLNLLISRDILDDPF*LPNAFQ Trigger: TTGGAAAGCATTTGGGAGCCAGAAAGGATCATCCAG...GATATCCCGAGAGATCAGCAAATTCAGAGATACACACAAGAAACTGGAAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCTTCACTGAATTAGGTTaGCCAGGACTATTGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPFTELG*PGLLEA Trigger: TGCTTCCAATAGTCCTGGCCAACCTAATTCAGTGAA...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| 3UTR CAA 72 bp | TTTCGGGGCACATCATCACTGTCCTCATCCTCGAATTaGTTAAAGACACTATCTACAGGTAGTTTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRGTSSLSSSSN*LKTLSTGSFFL Trigger: GAGAAAGAAACTACCTGTAGATAGTGTCTTTAACAAATTCGAGGATGAGGACAGTGATGATGTGCCCCGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
||
| 3UTR CAA 72 bp | GCTGTGGGAATTTTCTCAATGAGACTCTTAATGTGTTaGCGCTTTTCTTCAGTGTTTACAGTGCCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGIFSMRLLMC*RFSSVFTVPLV Trigger: CACCAAAGGCACTGTAAACACTGAAGAAAAGCGCAAACACATTAAGAGTCTCATTGAGAAAATTCCCACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182450.8 |
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| CDS-3UTR TCA 90 bp | GACTCCTGTGAGGGGGCATTTAGTTCACTGGAATATTCTCGGATTAAAACTTCATCGTATAAGCATGTCTaGAGCCTTCTCAGAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSCEGAFSSLEYSRIKTSSYKHV*SLLRNV Trigger: AACATTTCTGAGAAGGCTTCAGACATGCTTATACGA...TGAAGTTTTAATCCGAGAATATTCCAGTGAACTAAATGCCCCCTCACAGGAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
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| CDS-3UTR TCA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCCTGCTGTTGATCTGGTaGGTTTTCATGAGGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPLLLIW*VFMRNN Trigger: ATTATTCCTCATGAAAACTCACCAGATCAACAGCAG...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CCA 90 bp | TCTTCTTCCAGTTTCTTGTGTGTATCTCTGAATTTGCTGATCTCTCGGGATATCAGCCATAATACTCATTaGTACAGGAATCATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSFLCVSLNLLISRDISHNTH*YRNHRC Trigger: ACACCGATGATTCCTGTACCAATGAGTATTATGGCT...GATATCCCGAGAGATCAGCAAATTCAGAGATACACACAAGAAACTGGAAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTGGGCATTTAGTTCACTaGAATATTCTCGGATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQCVAHSRIPVSGKYTVIGHLVH*NILGLK Trigger: TTTTAATCCGAGAATATTCCAGTGAACTAAATGCCC...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | TCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCATTAATTTTAAGCCTGGATaGTCCTTTCTGGCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNLLISRDIKSLLSSSINFKPG*SFLAPK Trigger: TTTGGGAGCCAGAAAGGATCATCCAGGCTTAAAATT...AATGGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
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| CDS-3UTR CCA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCTGTTTACAGTGCCTTTaGTGGCATTTTTATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPCLQCL*WHFYHL Trigger: AAGATGATAAAAATGCCACCAAAGGCACTGTAAACA...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| 3UTR CAA 72 bp | GGTTGGCACAATTATCACTTTTCCTTTATGTGTGCATaGATGATTACGAAATGTTTAAGGGAGCCCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWHNYHFSFMCA*MITKCLREPTK Trigger: TTTGGTGGGCTCCCTTAAACATTTCGTAATCATCAATGCACACATAAAGGAAAAGTGATAATTGTGCCAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | CACATAAACACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTTCGTATAAGCATGTCTaGAGCCTTCTCAGAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HINTLIQRYIRKDLSARFSYKHV*SLLRNV Trigger: AACATTTCTGAGAAGGCTTCAGACATGCTTATACGA...AAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGTGTTTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | CACATAAACACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTTTCTTCTCTCCAATCTaGAGGTCATGCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HINTLIQRYIRKDLSARFFFSPI*RSCNNL Trigger: CAGATTATTGCATGACCTTCAGATTGGAGAGAAGAA...AAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGTGTTTATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR TCA 90 bp | TCTCTGAATTTGCTGATCTCTCGGGATATCAAATCTCTTTTGTCTTCTTCCATTTTCTTCTCTCCAATCTaGAGGTCATGCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLNLLISRDIKSLLSSSIFFSPI*RSCNNL Trigger: CAGATTATTGCATGACCTTCAGATTGGAGAGAAGAA...AATGGAAGAAGACAAAAGAGATTTGATATCCCGAGAGATCAGCAAATTCAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CCA 90 bp | CACATAAACACATTAATACAGAGATACATTAGGAAGGACCTGTCTGCTAGGTTTTTACAGTGCCTTTGGTaGCATTTTTATCATCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HINTLIQRYIRKDLSARFLQCLW*HFYHLR Trigger: GCGAAGATGATAAAAATGCCACCAAAGGCACTGTAA...AAACCTAGCAGACAGGTCCTTCCTAATGTATCTCTGTATTAATGTGTTTATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CCA 90 bp | GACACCGAAAATTCAAAGTCCTTTGAAGGGTGTGAAAGAAGAAATCTGAAATGTCAAGGCCAATTTTCTTaGCTTCTGTTTCATATATCA | + |
|
Preference number: 4 (lower is better) Translates to: DTENSKSFEGCERRNLKCQGQFS*LLFHIS Trigger: TGATATATGAAACAGAAGCCAAGAAAATTGGCCTTG...ACATTTCAGATTTCTTCTTTCACACCCTTCAAAGGACTTTGAATTTTCGGTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| 3UTR CAA 72 bp | AGTCTCTGGAAAATACACCGTAATTATCCTAGGTATTaGGGTTGGCACAATTATCACTTTTCCTTTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLWKIHRNYPRY*GWHNYHFSFMC Trigger: ACACATAAAGGAAAAGTGATAATTGTGCCAACCCAAATACCTAGGATAATTACGGTGTATTTTCCAGAGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS CCA 90 bp | AGGTACTGGTGGAGGAAAGCCAGGAAACTGTGGGGGTGGGATCCCTaGAGGGAGAGCTGGGATTCCCATGGGAGGGCGATTCAAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RYWWRKARKLWGWDP*RESWDSHGRAIQMR Trigger: CCTCATTTGAATCGCCCTCCCATGGGAATCCCAGCTCTCCCTCCAGGGATCCCACCCCCACAGTTTCCTGGCTTTCCTCCACCAGTACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048155.16 ENSMUST00000181983.8 ENSMUST00000182004.8 ENSMUST00000182036.8 ENSMUST00000182450.8 ENSMUST00000182618.8 ENSMUST00000182633.8 ENSMUST00000183154.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGATCATCCCCAGGAGTGTaGGGGGTTGCGTTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRSSPGV*GVALPL Trigger: CAGTGGCAACGCAACCCCCAACACTCCTGGGGATGA...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGTGGTTCTTGCTTTATTaGAGGTTGCCTGCGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLWFLLY*RLPAPL Trigger: GAGAGGCGCAGGCAACCTCAAATAAAGCAAGAACCA...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | CCATGCCTTTACAAGGGCTTGCCATTTCTGATCAGGAAAGTGGGAACGAGGCTGGGTTGGCCAGGACTATaGGAAGCACCCAATTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PCLYKGLPFLIRKVGTRLGWPGL*EAPNLR Trigger: CCTTAAATTGGGTGCTTCCAATAGTCCTGGCCAACC...CAGCCTCGTTCCCACTTTCCTGATCAGAAATGGCAAGCCCTTGTAAAGGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCGTGTTGGGGGTTGCGTaGCCACTGGCAGAGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPVLGVA*PLAEDT Trigger: TGTGTCCTCTGCCAGTGGCAACGCAACCCCCAACAC...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGATGTGTATCTCTGAATTaGCTGATCTCTCGGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRCVSLN*LISRDI Trigger: GATATCCCGAGAGATCAGCAAATTCAGAGATACACA...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | GACACCGAAAATTCAAAGTCCTTTGAAGGGTGTGAAAGAAGAAATCTGAAATGTCAGGAGTGTTGGGGGTaGCGTTGCCACTGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DTENSKSFEGCERRNLKCQECWG*RCHWQR Trigger: CCTCTGCCAGTGGCAACGCAACCCCCAACACTCCTG...ACATTTCAGATTTCTTCTTTCACACCCTTCAAAGGACTTTGAATTTTCGGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | TCTGTGCCTGGTGAGCATAAAGAGGACCAAGGACACAGATGGCTTTACACCCGAAACTGTGCCTTTGTCTaGGCATCAACTTTAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVPGEHKEDQGHRWLYTRNCAFV*ASTLTS Trigger: ACTTGTTAAAGTTGATGCCAAGACAAAGGCACAGTT...TCGGGTGTAAAGCCATCTGTGTCCTTGGTCCTCTTTATGCTCACCAGGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048155.16 ENSMUST00000182450.8 |
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| CDS-3UTR CAA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCTTGCTTTATTTGAGGTaGCCTGCGCCTCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPLLYLR*PAPLSL Trigger: GAGGCTGAGAGGCGCAGGCAACCTCAAATAAAGCAA...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACGGCTTAGTCCTATTTTaGGCCTATGCTCCTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHGLVLF*AYAPQA Trigger: AGCCTGAGGAGCATAGGCCAAAAATAGGACTAAGCC...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCCTTGAGACAAGGCTTTaGCTCTGGTTCTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPLETRL*LWFFLL Trigger: GAGGAGGAAGAACCAGAGCAAAAGCCTTGTCTCAAG...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | TGTAAACTTACCTTATTCACTTCTTTATTGGTACGGGGAATAGAACCCAGGCCCGCAAAGAGCTCAGGTTaGGCTGTGGGAATTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CKLTLFTSLLVRGIEPRPAKSSG*AVGIFS Trigger: TGAGAAAATTCCCACAGCCAAACCTGAGCTCTTTGC...GGGCCTGGGTTCTATTCCCCGTACCAATAAAGAAGTGAATAAGGTAAGTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACACAAAATCCAAAAGCTaGAAGTTTCCCAGAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHTKSKS*KFPRST Trigger: GGTGCTTCTGGGAAACTTCAAGCTTTTGGATTTTGT...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | TCTGAGCCATCAGGTGGAGGGAGGGATAAGATTATGATGTATCATCCTATACACTCTGGTCTCTTCGCTTaGTTTCTTCATCTAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SEPSGGGRDKIMMYHPIHSGLFA*FLHLRL Trigger: AAGCCTTAGATGAAGAAACAAAGCGAAGAGACCAGA...GTGTATAGGATGATACATCATAATCTTATCCCTCCCTCCACCTGATGGCTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | CACAGATGGCTTTACACCCGAGTGAGTACACAGAGCATCAACAAATTAGAGGACTCGATGATTTTCTTATaGATCCATGGCCGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRWLYTRVSTQSINKLEDSMIFL*IHGRIL Trigger: AAGAATCCGGCCATGGATCAATAAGAAAATCATCGA...GTCCTCTAATTTGTTGATGCTCTGTGTACTCACTCGGGTGTAAAGCCATCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
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| CDS-3UTR CAA 90 bp | CAGCAGTGTGTTGCTCACAGCAGAATACCAGTCTCTGGAAAATACACCGTAATTTCTTCTTCCAGTTTCTaGTGTGTATCTCTGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQCVAHSRIPVSGKYTVISSSSF*CVSLNL Trigger: CAAATTCAGAGATACACACAAGAAACTGGAAGAAGA...AATTACGGTGTATTTTCCAGAGACTGGTATTCTGCTGTGAGCAACACACTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | GAATATTCTCGGATTAAAACTTCAATGGCCCCTTTAATCATCTGGTCTCTTCGCAACTGTGCCTTTGTCTaGGCATCAACTTTAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EYSRIKTSMAPLIIWSLRNCAFV*ASTLTS Trigger: ACTTGTTAAAGTTGATGCCAAGACAAAGGCACAGTT...GCGAAGAGACCAGATGATTAAAGGGGCCATTGAAGTTTTAATCCGAGAATATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS-3UTR CAA 90 bp | GACACCGAAAATTCAAAGTCCTTTGAAGGGTGTGAAAGAAGAAATCTGAAATGTCTCGGATTCTGGTTCTaGCTTTATTTGAGGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DTENSKSFEGCERRNLKCLGFWF*LYLRLP Trigger: AGGCAACCTCAAATAAAGCAAGAACCAGAATCCGAG...ACATTTCAGATTTCTTCTTTCACACCCTTCAAAGGACTTTGAATTTTCGGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048155.16 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCAGTTTCTTGTGTGTATCTCTGAATTTGCTGATCTCTCGGGATATCAAAACTGTGCCTTTGTCTaGGCATCAACTTTAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FFQFLVCISEFADLSGYQNCAFV*ASTLTS Trigger: ACTTGTTAAAGTTGATGCCAAGACAAAGGCACAGTT...TTGATATCCCGAGAGATCAGCAAATTCAGAGATACACACAAGAAACTGGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182450.8 ENSMUST00000182633.8 |
||
| CDS CCA 72 bp | AGGAAACTGTGGGGGTGGGATCCCTGGAGGGAGAGCTaGGATTCCCATGGGAGGGCGATTCAAATGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RKLWGWDPWRES*DSHGRAIQMRG Trigger: CCCCCTCATTTGAATCGCCCTCCCATGGGAATCCCAGCTCTCCCTCCAGGGATCCCACCCCCACAGTTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048155.16 ENSMUST00000181983.8 ENSMUST00000182004.8 ENSMUST00000182036.8 ENSMUST00000182450.8 ENSMUST00000182618.8 ENSMUST00000182633.8 ENSMUST00000183154.8 |
||
| CDS CCA 72 bp | TGGTACAGGAATCATCGGTGTCCCTGGAGGTACTGGTaGAGGAAAGCCAGGAAACTGTGGGGGTGGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: WYRNHRCPWRYW*RKARKLWGWDP Trigger: GGGATCCCACCCCCACAGTTTCCTGGCTTTCCTCCACCAGTACCTCCAGGGACACCGATGATTCCTGTACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048155.16 ENSMUST00000181983.8 ENSMUST00000182004.8 ENSMUST00000182036.8 ENSMUST00000182450.8 ENSMUST00000182618.8 ENSMUST00000182633.8 ENSMUST00000183154.8 |
||
| CDS CAA 72 bp | TTCTTTGCTTTCCATTCATCCAACTGTGCCTTTGTCTaGGCATCAACTTTAACAAGTAGCTTCTTCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFAFHSSNCAFV*ASTLTSSFFSP Trigger: TGGAGAGAAGAAGCTACTTGTTAAAGTTGATGCCAAGACAAAGGCACAGTTGGATGAATGGAAAGCAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048155.16 ENSMUST00000181983.8 ENSMUST00000182036.8 ENSMUST00000182450.8 ENSMUST00000182633.8 |
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