Pregenerated sensors for RBM18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026889Ensembl transcript IDs: ENSMUST00000028251.10, ENSMUST00000122456.8, ENSMUST00000134668.2, ENSMUST00000200733.4
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTGCTTCTGCTaGTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VQRRRTSDVETICFC*SGNSRPSSSRLPGC Trigger: ACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR GCA 90 bp | ACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTGCTTCTaGTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TVQRRRTSDVETICF*CSGNSRPSSSRLPG Trigger: GCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR TCA 90 bp | ATAAGTCACCAGACAAATGGGAGCCGGTGTTCCCACTTCCCTGAATaGGCTCCCAAGTGGAAGGAGAGTTTCCCACATCACAGATACACA | + |
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Preference number: 1 (lower is better) Translates to: ISHQTNGSRCSHFPE*APKWKESFPHHRYT Trigger: TGTGTATCTGTGATGTGGGAAACTCTCCTTCCACTTGGGAGCTCATTCAGGGAAGTGGGAACACCGGCTCCCATTTGTCTGGTGACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR CCA 90 bp | AAACCCCAGAAGTTAAGTCAAGTGTCTCTACAACCCAAGTCATCATaGGTGGCACCTGTGGTGAGCGACAGTGACCTGCTCAGTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: KPQKLSQVSLQPKSS*VAPVVSDSDLLSEE Trigger: TTCTTCACTGAGCAGGTCACTGTCGCTCACCACAGGTGCCACCCATGATGACTTGGGTTGTAGAGACACTTGACTTAACTTCTGGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR TCA 90 bp | TCTAATAAGTCACCAGACAAATGGGAGCCGGTGTTCCCACTTCCCTaGATGAGCTCCCAAGTGGAAGGAGAGTTTCCCACATCACAGATA | + |
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Preference number: 1 (lower is better) Translates to: SNKSPDKWEPVFPLP*MSSQVEGEFPTSQI Trigger: TATCTGTGATGTGGGAAACTCTCCTTCCACTTGGGAGCTCATTCAGGGAAGTGGGAACACCGGCTCCCATTTGTCTGGTGACTTATTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR GCA 90 bp | ATGAACACCCAAACACGCTATGTCACCGGCCCTAACAAGAGACTGTaGTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGA | + |
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Preference number: 1 (lower is better) Translates to: MNTQTRYVTGPNKRL*SVGSTIHIYTVQRR Trigger: TCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACATAGCGTGTTTGGGTGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR GCA 90 bp | ATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTaGTTCTGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTT | + |
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Preference number: 1 (lower is better) Translates to: IYTVQRRRTSDVETI*FCCSGNSRPSSSRL Trigger: AAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR CCA 90 bp | GTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTaGAGACCATTTGCTTCTGCTGCTCTGGTAATTCACGACCATCAT | + |
|
Preference number: 1 (lower is better) Translates to: VPFTSTQYRGEGLQT*RPFASAALVIHDHH Trigger: ATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR TCA 90 bp | TATCTTTGCAGTGACACTGAGGTTAGACTGAGCAGGCTCAGTGCTTaGGGATGGCTCAAGGCTGATGGGAAGGATCTTATCATTCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: YLCSDTEVRLSRLSA*GWLKADGKDLIILV Trigger: AACAAGAATGATAAGATCCTTCCCATCAGCCTTGAGCCATCCTCAAGCACTGAGCCTGCTCAGTCTAACCTCAGTGTCACTGCAAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR GCA 90 bp | ATCAGGTGGTTTAAAGTAGGAATAAACAGGCGCTGCTGGGTACTCTaGATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTTCAATGGC | + |
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Preference number: 1 (lower is better) Translates to: IRWFKVGINRRCWVL*IRIFCHHFQLCFNG Trigger: GCCATTGAAGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCCTACTTTAAACCACCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR CCA 90 bp | AAACAAAGCAGCCAACTAGCGCATCTCAGTGTTCACATCACAGTCTaGACACATTCCTATTTATTCTGGATGATGCTCAATTCACACATA | + |
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Preference number: 1 (lower is better) Translates to: KQSSQLAHLSVHITV*THSYLFWMMLNSHI Trigger: TATGTGTGAATTGAGCATCATCCAGAATAAATAGGAATGTGTCCAGACTGTGATGTGAACACTGAGATGCGCTAGTTGGCTGCTTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR-3UTR GCA 90 bp | GGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTACTGAGCAGGCTCAGTaGTTGAGGATGGCTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: GAAGYSASGFSAIIFSFATEQAQ*LRMAQG Trigger: GCCTTGAGCCATCCTCAAGCACTGAGCCTGCTCAGT...AGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCTGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGTACTGAGCAGGCTCAGTaGTTGAGGATGGCTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: CFCCSGNSRPSSSRLPGCTEQAQ*LRMAQG Trigger: GCCTTGAGCCATCCTCAAGCACTGAGCCTGCTCAGT...ACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR CAA 90 bp | TGGGCCCATCGTACAACCAGCTTCTTAGACAGCGCCAGCTTGCCATaGAGACACTGGATGGCTTGTTCTGCTTCCTGCTTAGTTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: WAHRTTSFLDSASLP*RHWMACSASCLVSK Trigger: CTTTGAAACTAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAAGAAGCTGGTTGTACGATGGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
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| 3UTR-3UTR TCA 90 bp | TACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATGCGCCAGCTTGCCATTaGGACACTGGATGGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: YHSHLHSTEAKDFRRGDHAPACH*DTGWLV Trigger: AACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGC...ATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
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| 3UTR CAA 90 bp | CCCAAACACGCTATGTCACCGGCCCTAACAAGAGACTGTGCTCTGTaGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: PKHAMSPALTRDCAL*VVPFTSTQYRGEGL Trigger: AAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACATAGCGTGTTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR TCA 90 bp | GCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTTACACTGAGGTTAGACTaGGCAGGCTCAGTGCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLGTLHQDFLPSFSALLTLRLD*AGSVLE Trigger: CTCAAGCACTGAGCCTGCTCAGTCTAACCTCAGTGT...AAGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR TCA 90 bp | AATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTAGCAGGCTCAGTGCTTaGGGATGGCTCAAGGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: NSRPSSSRLPGCSRVRSSSRLSA*GWLKAD Trigger: ATCAGCCTTGAGCCATCCTCAAGCACTGAGCCTGCT...ACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATCGCTGCTGGGTACTCTaGATCAGGATTTTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: YHSHLHSTEAKDFRRGDHRCWVL*IRIFCH Trigger: ATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCG...ATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | CGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTCCTTTTGGAATAAACAGGCGCTaGTGGGTACTCTGCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: RPSSSRLPGCSRVRSSPFGINRR*WVLCIR Trigger: CCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCC...AAAAGGACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR CCA 90 bp | GGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTATAAACAGGCGCTGCTaGGTACTCTGCATCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: GAAGYSASGFSAIIFSFAINRRC*VLCIRI Trigger: AATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTAT...AGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR TCA 90 bp | GTCACCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACGAAGACACATCCATATaGACACCCAAACACGCTATG | + |
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Preference number: 2 (lower is better) Translates to: VTGPNKRLCSVGSTIHIYEDTSI*TPKHAM Trigger: CATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTC...GTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR TCA 90 bp | GCTATGTCACCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACAGAAGACACATCCATATaGACACCCAAACACGCTATG | + |
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Preference number: 2 (lower is better) Translates to: AMSPALTRDCALLVVPFTEDTSI*TPKHAM Trigger: CATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTC...TGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATGAGACCATTTGCTTCTaGTGCTCTGGTAATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: YHSHLHSTEAKDFRRGDHETICF*CSGNSR Trigger: TCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTC...ATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTaGTTCTGCTGCTCTGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: CSVGSTIHIYTVQRRRTSDVETI*FCCSGN Trigger: ATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTC...TGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TTCACACATAGTTCAGGGAAGACACATCCATATGAACACCCAAACACGCTATGTGGAATAAACAGGCGCTaGTGGGTACTCTGCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: FTHSSGKTHPYEHPNTLCGINRR*WVLCIR Trigger: CCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCC...ACATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTCCCTGAACTATGTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTATAAACAGGCGCTGCTaGGTACTCTGCATCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: CALLVVPFTSTQYRGEGLINRRC*VLCIRI Trigger: AATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTAT...AAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | GTCACCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACTGCATCAGGATTTTCTaGCATCATTTTCAGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VTGPNKRLCSVGSTIHIYCIRIF*HHFQLC Trigger: GCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCA...GTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TTCACACATAGTTCAGGGAAGACACATCCATATGAACACCCAAACACGCTATGTCGCTGCTGGGTACTCTaGATCAGGATTTTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: FTHSSGKTHPYEHPNTLCRCWVL*IRIFCH Trigger: ATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCG...ACATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTCCCTGAACTATGTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR CCA 90 bp | AACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGATAAACAGGCGCTGCTaGGTACTCTGCATCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: NKRLCSVGSTIHIYTVQRINRRC*VLCIRI Trigger: AATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTAT...CCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGAAACAGTTCTGTGGATTCTGAAACCCCAGAAGTTAAGTCAAGTGTCTACAAGGTCACTCAGCTaGTTCTTACAGCCCCATACA | + |
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Preference number: 2 (lower is better) Translates to: SSETVLWILKPQKLSQVSTRSLS*FLQPHT Trigger: TGTATGGGGCTGTAAGAAGCAGCTGAGTGACCTTGT...AGACACTTGACTTAACTTCTGGGGTTTCAGAATCCACAGAACTGTTTCAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR-3UTR GCA 90 bp | TTCACACATAGTTCAGGGAAGACACATCCATATGAACACCCAAACACGCTATGTGAGACCATTTGCTTCTaGTGCTCTGGTAATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: FTHSSGKTHPYEHPNTLCETICF*CSGNSR Trigger: TCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTC...ACATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTCCCTGAACTATGTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | CATGATACAGTTCTAACTGCAACAACCCCATGCTATAAAACAATCTCATGCAGTGACGTGGAGACCATTTaGTTCTGCTGCTCTGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: HDTVLTATTPCYKTISCSDVETI*FCCSGN Trigger: ATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTC...ACTGCATGAGATTGTTTTATAGCATGGGGTTGTTGCAGTTAGAACTGTATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAACAGTTCTGTGGATTCTGAAACCCCAGAAGTTAAGTCAAGTGTCTCTAATCTGGAGAGAAGCATaGTTTCAGGGTAACGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SETVLWILKPQKLSQVSLIWREA*FQGNVQ Trigger: CTGAACGTTACCCTGAAAGCATGCTTCTCTCCAGAT...TAGAGACACTTGACTTAACTTCTGGGGTTTCAGAATCCACAGAACTGTTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTGTTATGATCATATCTCTTGACTTGAGCGTGGGCCCATCGTACAACCAGTGCATCAGGATTTTCTaGCATCATTTTCAGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ILVMIISLDLSVGPSYNQCIRIF*HHFQLC Trigger: GCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCA...CTGGTTGTACGATGGGCCCACGCTCAAGTCAAGAGATATGATCATAACAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | AATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTTGCATCAGGATTTTCTaGCATCATTTTCAGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: NSRPSSSRLPGCSRVRSSCIRIF*HHFQLC Trigger: GCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCA...ACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR-3UTR GCA 90 bp | TGTATGCTTGTTTTTCTCTCTGGCACATTGTGTTTCTGGAGTTACAAATCCAAAGAGACCATTTGCTTCTaGTGCTCTGGTAATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: CMLVFLSGTLCFWSYKSKETICF*CSGNSR Trigger: TCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTC...TTTGGATTTGTAACTCCAGAAACACAATGTGCCAGAGAGAAAAACAAGCATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGAAACAGTTCTGTGGATTCTGAAACCCCAGAAGTTAAGTCAAGTGTCTAATAACAACGTTGTATaGTTGTTTTTCTCTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSETVLWILKPQKLSQVSNNNVV*LFFSLA Trigger: TGCCAGAGAGAAAAACAAGCATACAACGTTGTTATT...AGACACTTGACTTAACTTCTGGGGTTTCAGAATCCACAGAACTGTTTCAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR TCA 72 bp | CTCTACAACCCAAGTCATCATGGGTGGCACCTGTGGTaGGCGACAGTGACCTGCTCAGTGAAGAACGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: LYNPSHHGWHLW*ATVTCSVKNGV Trigger: AACACCGTTCTTCACTGAGCAGGTCACTGTCGCTCACCACAGGTGCCACCCATGATGACTTGGGTTGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR TCA 72 bp | CAGACAAATGGGAGCCGGTGTTCCCACTTCCCTGAATaGGCTCCCAAGTGGAAGGAGAGTTTCCCACATCAC | + |
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Preference number: 3 (lower is better) Translates to: QTNGSRCSHFPE*APKWKESFPHH Trigger: GTGATGTGGGAAACTCTCCTTCCACTTGGGAGCTCATTCAGGGAAGTGGGAACACCGGCTCCCATTTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR GCA 72 bp | CTGACTCCTGCTGCTCACTGCACTTTCTCTCTCAGCTaGAACAAGGTCACTCAGCTGCTTCTTACAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LTPAAHCTFSLS*NKVTQLLLTAP Trigger: TGGGGCTGTAAGAAGCAGCTGAGTGACCTTGTTGCAGCTGAGAGAGAAAGTGCAGTGAGCAGCAGGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGAGCGCCAGCTTGCCATaGAGACACTGGATGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: ALLVVPFTSTQYRGEGLQSASLP*RHWMAC Trigger: ACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCT...CTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
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| 3UTR TCA 72 bp | ACAGTCTGTCAGGCCCGGCACCAATTCAATCAGCACTaGGCTGAAGAAACACATTCCCAAGGCTGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TVCQARHQFNQH*AEETHSQGCLS Trigger: AGACAGACAGCCTTGGGAATGTGTTTCTTCAGCTCAGTGCTGATTGAATTGGTGCCGGGCCTGACAGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| 3UTR TCA 72 bp | AGTGACACTGAGGTTAGACTGAGCAGGCTCAGTGCTTaGGGATGGCTCAAGGCTGATGGGAAGGATCTTATC | + |
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Preference number: 3 (lower is better) Translates to: SDTEVRLSRLSA*GWLKADGKDLI Trigger: GATAAGATCCTTCCCATCAGCCTTGAGCCATCCTCAAGCACTGAGCCTGCTCAGTCTAACCTCAGTGTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
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| 3UTR GCA 72 bp | GTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTaGTTCTGCTGCTCTGGTAATTCACGACCATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VQRRRTSDVETI*FCCSGNSRPSS Trigger: AGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR GCA 72 bp | AAGCATGCTTTCAGGGTAACGTTCAGTTTTAGGCCGTaGGGTCTTCCAAAAGGACAGAACGAGTGTGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KHAFRVTFSFRP*GLPKGQNECGC Trigger: ACAACCACACTCGTTCTGTCCTTTTGGAAGACCGCACGGCCTAAAACTGAACGTTACCCTGAAAGCATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| 3UTR GCA 72 bp | CGAAGGACTTCAGACGTGGAGACCATTTGCTTCTGCTaGTCTGGTAATTCACGACCATCATCTTCGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: RRTSDVETICFC*SGNSRPSSSRL Trigger: AAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR CCA 72 bp | ACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTaGAGACCATTTGCTTCTGCTGCTCTGGTAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TSTQYRGEGLQT*RPFASAALVIH Trigger: GTGAATTACCAGAGCAGCAGAAGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR CCA 72 bp | AGCTTCTTAGACAGCGCCAGCTTGCCATTGAGACACTaGATGGCTTGTTCTGCTTCCTGCTTAGTTTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFLDSASLPLRH*MACSASCLVSK Trigger: CTTTGAAACTAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAAGAGACTGTGCTCTGTaGGTAGTACCATTCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: CCSGNSRPSSSRLPGCSRRDCAL*VVPFTS Trigger: AGATGTGAATGGTACTACCAACAGAGCACAGTCTCT...TCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTAGAGACTGTGCTCTGTaGGTAGTACCATTCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: LCSVGSTIHIYTVQRRRTRDCAL*VVPFTS Trigger: AGATGTGAATGGTACTACCAACAGAGCACAGTCTCT...AGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR GCA 72 bp | CAAACACGCTATGTCACCGGCCCTAACAAGAGACTGTaGTCTGTTGGTAGTACCATTCACATCTACACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QTRYVTGPNKRL*SVGSTIHIYTV Trigger: TACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACATAGCGTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTAGAGACTGTGCTCTGTaGGTAGTACCATTCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: CALLVVPFTSTQYRGEGLRDCAL*VVPFTS Trigger: AGATGTGAATGGTACTACCAACAGAGCACAGTCTCT...AAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTCCATCATTTTCAGCTTaGCTTCAATGGCTTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: GAAGYSASGFSAIIFSFAPSFSA*LQWLLS Trigger: AGATAAAAGCCATTGAAGCAAAGCTGAAAATGATGG...AGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| 3UTR TCA 72 bp | GAAGGATCTTATCATTCTTGTTATGATCATATCTCTTaGCTTGAGCGTGGGCCCATCGTACAACCAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGSYHSCYDHIS*LERGPIVQPAS Trigger: AGAAGCTGGTTGTACGATGGGCCCACGCTCAAGTCAAGAGATATGATCATAACAAGAATGATAAGATCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| 3UTR GCA 72 bp | TTTAAAGTAGGAATAAACAGGCGCTGCTGGGTACTCTaGATCAGGATTTTCTGCCATCATTTTCAGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FKVGINRRCWVL*IRIFCHHFQLC Trigger: GCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCCTACTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| 3UTR GCA 72 bp | TTTATCAGGTGGTTTAAAGTAGGAATAAACAGGCGCTaGTGGGTACTCTGCATCAGGATTTTCTGCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: FIRWFKVGINRR*WVLCIRIFCHH Trigger: ATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCCTACTTTAAACCACCTGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| 3UTR CCA 72 bp | CTACCATGTTCATATCTCCAAGGAGACAGAGATATCTaGAGAGAAGCATGCTTTCAGGGTAACGTTCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPCSYLQGDRDI*REACFQGNVQF Trigger: AAACTGAACGTTACCCTGAAAGCATGCTTCTCTCCAGATATCTCTGTCTCCTTGGAGATATGAACATGGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| 3UTR CCA 72 bp | ATCAGGTGGTTTAAAGTAGGAATAAACAGGCGCTGCTaGGTACTCTGCATCAGGATTTTCTGCCATCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: IRWFKVGINRRC*VLCIRIFCHHF Trigger: AAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCCTACTTTAAACCACCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| 3UTR CAA 72 bp | TTCCAAAAGGACAGAACGAGTGTGGTTGTTACGGTCTaGATGCCTGAGCACCGGCTGCTGACTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQKDRTSVVVTV*MPEHRLLTPAA Trigger: AGCAGCAGGAGTCAGCAGCCGGTGCTCAGGCATCAAGACCGTAACAACCACACTCGTTCTGTCCTTTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| 3UTR CAA 72 bp | GCCCATCGTACAACCAGCTTCTTAGACAGCGCCAGCTaGCCATTGAGACACTGGATGGCTTGTTCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHRTTSFLDSAS*PLRHWMACSAS Trigger: GGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAAGAAGCTGGTTGTACGATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| CDS-3UTR TCA 90 bp | GCGTGGGCCCATCGTACAACCAGCTTCTTAGACAGCGCCAGCTTGCCATTGAGAACTTCTGGAGGAGCTTaGGGAGGTGGTATCTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWAHRTTSFLDSASLPLRTSGGA*GGGILR Trigger: TCTTAAGATACCACCTCCTCAAGCTCCTCCAGAAGT...TCTCAATGGCAAGCTGGCGCTGTCTAAGAAGCTGGTTGTACGATGGGCCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| CDS-3UTR TCA 90 bp | CCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGGCGCCAGCTTGCCATTaGGACACTGGATGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PALTRDCALLVVPFTSTQAPACH*DTGWLV Trigger: AACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGC...CTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCGCCAGCTTGCCATTaGGACACTGGATGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGAAGYSASGFSAIIFSFAPACH*DTGWLV Trigger: AACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGC...AAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAAGCAGGCTCAGTGCTTaGGGATGGCTCAAGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCSGNSRPSSSRLPGCSRSRLSA*GWLKAD Trigger: ATCAGCCTTGAGCCATCCTCAAGCACTGAGCCTGCT...TCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS-3UTR TCA 90 bp | CCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGACACTGAGGTTAGACTaGGCAGGCTCAGTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PALTRDCALLVVPFTSTQTLRLD*AGSVLE Trigger: CTCAAGCACTGAGCCTGCTCAGTCTAACCTCAGTGT...CTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTACTGAGCAGGCTCAGTaGTTGAGGATGGCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSVGSTIHIYTVQRRRTTEQAQ*LRMAQG Trigger: GCCTTGAGCCATCCTCAAGCACTGAGCCTGCTCAGT...AGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| 3UTR CAA 72 bp | CGTACAACCAGCTTCTTAGACAGCGCCAGCTTGCCATaGAGACACTGGATGGCTTGTTCTGCTTCCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTTSFLDSASLP*RHWMACSASCL Trigger: TAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAAGAAGCTGGTTGTACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| CDS-3UTR TCA 90 bp | GTCTTCCAAAAGGACAGAACGAGTGTGGTTGTTACGGTCTTGATGCCTGAGCACGGAGGTGGTATTCTGTaGTTTTGGGATCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFQKDRTSVVVTVLMPEHGGGIL*FWDPGC Trigger: GCAACCTGGATCCCAAAATCACAGAATACCACCTCC...GTGCTCAGGCATCAAGACCGTAACAACCACACTCGTTCTGTCCTTTTGGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAAGCAGGCTCAGTGCTTaGGGATGGCTCAAGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSVGSTIHIYTVQRRRTSSRLSA*GWLKAD Trigger: ATCAGCCTTGAGCCATCCTCAAGCACTGAGCCTGCT...TGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTGCTACACTGAGGTTAGACTaGGCAGGCTCAGTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTSTQYRGEGLQTWRPFATLRLD*AGSVLE Trigger: CTCAAGCACTGAGCCTGCTCAGTCTAACCTCAGTGT...AGCAAATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS-3UTR CCA 90 bp | CCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGAGCCCTCTGAAAGGATaGATGCATTCTCCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PALTRDCALLVVPFTSTQSPLKG*MHSPGE Trigger: TTCCCCTGGAGAATGCATCCATCCTTTCAGAGGGCT...CTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| CDS-3UTR CCA 90 bp | GACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGAACCTTGCCAAACTTCTaGAGGAGCTTGAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCALLVVPFTSTQYRGEGTLPNF*RSLRRW Trigger: CCACCTCCTCAAGCTCCTCCAGAAGTTTGGCAAGGT...TCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000200733.4 |
||
| CDS-3UTR CCA 90 bp | ATGTCACCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACCTTGCCAAACTTCTaGAGGAGCTTGAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSPALTRDCALLVVPFTSTLPNF*RSLRRW Trigger: CCACCTCCTCAAGCTCCTCCAGAAGTTTGGCAAGGT...AGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000200733.4 |
||
| 3UTR CAA 72 bp | GCTATGTCACCGGCCCTAACAAGAGACTGTGCTCTGTaGGTAGTACCATTCACATCTACACAGTACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AMSPALTRDCAL*VVPFTSTQYRG Trigger: GCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTCTGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGGAGGTGGTATTCTGTaGTTTTGGGATCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FASAALVIHDHHLRDFQAGGGIL*FWDPGC Trigger: GCAACCTGGATCCCAAAATCACAGAATACCACCTCC...AGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134668.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGGCTTGTTCTGCTTCCTaGCTTATGGAAGAGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AALVIHDHHLRDFQAVLEACSAS*LMEEEV Trigger: GACTTCCTCTTCCATAAGTCAGGAAGCAGAACAAGC...CTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134668.2 |
||
| CDS-3UTR GCA 90 bp | AATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTACTGAGCAGGCTCAGTaGTTGAGGATGGCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSRPSSSRLPGCSRVRSSTEQAQ*LRMAQG Trigger: GCCTTGAGCCATCCTCAAGCACTGAGCCTGCTCAGT...ACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS-3UTR CCA 90 bp | TACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATAGCCCTCTGAAAGGATaGATGCATTCTCCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YHSHLHSTEAKDFRRGDHSPLKG*MHSPGE Trigger: TTCCCCTGGAGAATGCATCCATCCTTTCAGAGGGCT...ATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| CDS-3UTR CCA 90 bp | ACAGGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTAGCCCTCTGAAAGGATaGATGCATTCTCCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGAAGYSASGFSAIIFSFSPLKG*MHSPGE Trigger: TTCCCCTGGAGAATGCATCCATCCTTTCAGAGGGCT...AAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| CDS-3UTR CCA 90 bp | CTTGTTATGATCATATCTCTTGACTTGAGCGTGGGCCCATCGTACAACCAGCTTACCTTGCCAAACTTCTaGAGGAGCTTGAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVMIISLDLSVGPSYNQLTLPNF*RSLRRW Trigger: CCACCTCCTCAAGCTCCTCCAGAAGTTTGGCAAGGT...AAGCTGGTTGTACGATGGGCCCACGCTCAAGTCAAGAGATATGATCATAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| CDS-3UTR CCA 90 bp | CGCCAGCTTGCCATTGAGACACTGGATGGCTTGTTCTGCTTCCTGCTTAGTTTCAGGAGCTTGAGGAGGTaGTATCTTAAGATTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQLAIETLDGLFCFLLSFRSLRR*YLKIPG Trigger: TCCTGGAATCTTAAGATACCACCTCCTCAAGCTCCT...GAAACTAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCAAGTGGAAGGAGAGTTTCCCACATCACAGATACACACAACTGATAAAGCCCTCCAAAGCACCTaGCTTATGGAAGAGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQVEGEFPTSQIHTTDKALQST*LMEEEV Trigger: GACTTCCTCTTCCATAAGTCAGGTGCTTTGGAGGGC...TTTATCAGTTGTGTGTATCTGTGATGTGGGAAACTCTCCTTCCACTTGGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR TCA 90 bp | AACAGGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGTTCTGCTTCTCTGTaGTTTTGGGATCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRRCWVLCIRIFCHHFQLCSASL*FWDPGC Trigger: GCAACCTGGATCCCAAAATCACAGAGAAGCAGAACA...AAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCTGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTTTTGGGATCCAGGTTaGCAATCCATAATCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFCCSGNSRPSSSRLPGCFWDPG*QSIIGV Trigger: GACACCGATTATGGATTGGCAACCTGGATCCCAAAA...ACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| CDS-3UTR GCA 90 bp | GGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTTTTTGGGATCCAGGTTaGCAATCCATAATCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GAAGYSASGFSAIIFSFAFWDPG*QSIIGV Trigger: GACACCGATTATGGATTGGCAACCTGGATCCCAAAA...AGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| CDS-3UTR GCA 90 bp | CCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTTTTGGGATCCAGGTTaGCAATCCATAATCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PALTRDCALLVVPFTSTQFWDPG*QSIIGV Trigger: GACACCGATTATGGATTGGCAACCTGGATCCCAAAA...CTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| CDS-3UTR GCA 90 bp | CGCCAGCTTGCCATTGAGACACTGGATGGCTTGTTCTGCTTCCTGCTTAGTTTCGATTCCAGGAACATCTaGTTAGGTCTGTGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLAIETLDGLFCFLLSFDSRNI*LGLCLS Trigger: TGAAAGACACAGACCTAAGCAGATGTTCCTGGAATC...GAAACTAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| CDS-3UTR CCA 90 bp | CTTGTTATGATCATATCTCTTGACTTGAGCGTGGGCCCATCGTACAACCAGCTTTTGCCATTGAGACACTaGATGGCTTGTTCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVMIISLDLSVGPSYNQLLPLRH*MACSAS Trigger: GGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAA...AAGCTGGTTGTACGATGGGCCCACGCTCAAGTCAAGAGATATGATCATAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134668.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACATAAACAGGCGCTGCTaGGTACTCTGCATCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALTRDCALLVVPFTSTQYINRRC*VLCIRI Trigger: AATCCTGATGCAGAGTACCCAGCAGCGCCTGTTTAT...GTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR CCA 90 bp | TACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATTTGCCATTGAGACACTaGATGGCTTGTTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHSHLHSTEAKDFRRGDHLPLRH*MACSAS Trigger: AGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAA...ATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS-3UTR TCA 90 bp | CGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTCCTTTTTTATCGGAACATCTGTaGTTTTGGGATCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSSSRLPGCSRVRSSPFLSEHL*FWDPGC Trigger: GCAACCTGGATCCCAAAATCACAGATGTTCCGATAA...AAAAGGACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
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| CDS-3UTR GCA 90 bp | GGTGAATTCTATATTCTAATAAGTCACCAGACAAATGGGAGCCGGTGTTCCCACCAAACTGCTTCACCTTaGCAAACTTCTGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEFYILISHQTNGSRCSHQTASP*QTSGGA Trigger: AGCTCCTCCAGAAGTTTGGCAAGGTGAAGCAGTTTG...GTGGGAACACCGGCTCCCATTTGTCTGGTGACTTATTAGAATATAGAATTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR GCA 90 bp | CCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTGCATCAGGATTTTCTaGCATCATTTTCAGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PALTRDCALLVVPFTSTQCIRIF*HHFQLC Trigger: GCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCA...CTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR GCA 90 bp | CGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTCCTTTTCTGGATGGCTTGTTCTaGTTCTCTGTGATTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPSSSRLPGCSRVRSSPFLDGLF*FSVILG Trigger: TCCCAAAATCACAGAGAAGCAGAACAAGCCATCCAG...AAAAGGACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS-3UTR CCA 90 bp | TTCACACATAGTTCAGGGAAGACACATCCATATGAACACCCAAACACGCTATGTAGCCCTCTGAAAGGATaGATGCATTCTCCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTHSSGKTHPYEHPNTLCSPLKG*MHSPGE Trigger: TTCCCCTGGAGAATGCATCCATCCTTTCAGAGGGCT...ACATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTCCCTGAACTATGTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| CDS-3UTR CCA 90 bp | CGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTCCTTTTCTGCTTCCTGACTTATaGAAGAGGAAGTCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSSSRLPGCSRVRSSPFLLPDL*KRKSNC Trigger: GCAGTTTGACTTCCTCTTCCATAAGTCAGGAAGCAG...AAAAGGACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134668.2 |
||
| CDS-3UTR GCA 90 bp | CTATGTGTGTCTCTATACTACCATGTTCATATCTCCAAGGAGACAGAGATATCTGGAATAAACAGGCGCTaGTGGGTACTCTGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVSLYYHVHISKETEISGINRR*WVLCIR Trigger: CCTGATGCAGAGTACCCAGCAGCGCCTGTTTATTCC...AGATATCTCTGTCTCCTTGGAGATATGAACATGGTAGTATAGAGACACACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR GCA 90 bp | TTCACACATAGTTCAGGGAAGACACATCCATATGAACACCCAAACACGCTATGTTTTTGGGATCCAGGTTaGCAATCCATAATCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTHSSGKTHPYEHPNTLCFWDPG*QSIIGV Trigger: GACACCGATTATGGATTGGCAACCTGGATCCCAAAA...ACATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTCCCTGAACTATGTGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
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| CDS-3UTR GCA 90 bp | AACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCTGGATGGCTTGTTCTaGTTCCTGCTTAGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKRLCSVGSTIHIYTVQRLDGLF*FLLSFK Trigger: TTTGAAACTAAGCAGGAAGCAGAACAAGCCATCCAG...CCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR CCA 90 bp | TATACTACCATGTTCATATCTCCAAGGAGACAGAGATATCTGGAGAGAAGCATGTTGCCATTGAGACACTaGATGGCTTGTTCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTTMFISPRRQRYLERSMLPLRH*MACSAS Trigger: GGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAA...CATGCTTCTCTCCAGATATCTCTGTCTCCTTGGAGATATGAACATGGTAGTATA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCTCTGGCACATTGTGTTTCTGGAGTTACAAATCCAAACAAAGCAGCCAAGGAGCTTGAGGAGGTaGTATTCTGTGATTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLWHIVFLELQIQTKQPRSLRR*YSVILG Trigger: TCCCAAAATCACAGAATACCACCTCCTCAAGCTCCT...TGGCTGCTTTGTTTGGATTTGTAACTCCAGAAACACAATGTGCCAGAGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR GCA 90 bp | AACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGAATGGCTTTTATCTTTaGAGTGACACTGAGGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKRLCSVGSTIHIYTVQRNGFYL*SDTEVR Trigger: TCTAACCTCAGTGTCACTGCAAAGATAAAAGCCATT...CCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR GCA 90 bp | TATACTACCATGTTCATATCTCCAAGGAGACAGAGATATCTGGAGAGAAGCATGGCTTGTTCTGCTTCCTaGTTAGTTTCAAAGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: YTTMFISPRRQRYLERSMACSAS*LVSKLT Trigger: TGTTAACTTTGAAACTAAGCAGGAAGCAGAACAAGC...CATGCTTCTCTCCAGATATCTCTGTCTCCTTGGAGATATGAACATGGTAGTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS GCA 90 bp | GGCTGGCCCTCCAAAGCACCTGACTTATGGAAGAGGAAGTCAAACTaGTTCACCTTGCCAAACTTCTGGAGGAGCTTGAGGAGGTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GWPSKAPDLWKRKSN*FTLPNFWRSLRRWY Trigger: ATACCACCTCCTCAAGCTCCTCCAGAAGTTTGGCAAGGTGAAGCAGTTTGACTTCCTCTTCCATAAGTCAGGTGCTTTGGAGGGCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS CCA 90 bp | ACAAAACAGTACCCTCGGGGCTGGCCCTCCAAAGCACCTGACTTATaGAAGAGGAAGTCAAACTGCTTCACCTTGCCAAACTTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKQYPRGWPSKAPDL*KRKSNCFTLPNFWR Trigger: CCTCCAGAAGTTTGGCAAGGTGAAGCAGTTTGACTTCCTCTTCCATAAGTCAGGTGCTTTGGAGGGCCAGCCCCGAGGGTACTGTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR CAA 90 bp | CCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACAGAGCGCCAGCTTGCCATaGAGACACTGGATGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PALTRDCALLVVPFTSTQSASLP*RHWMAC Trigger: ACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCT...CTGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS-3UTR CAA 90 bp | TACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAGACGTGGAGACCATAGCGCCAGCTTGCCATaGAGACACTGGATGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YHSHLHSTEAKDFRRGDHSASLP*RHWMAC Trigger: ACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCT...ATGGTCTCCACGTCTGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS-3UTR CAA 90 bp | GGCGCTGCTGGGTACTCTGCATCAGGATTTTCTGCCATCATTTTCAGCTTTGCTTTAGACAGCGCCAGCTaGCCATTGAGACACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GAAGYSASGFSAIIFSFALDSAS*PLRHWM Trigger: CATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAA...AGCAAAGCTGAAAATGATGGCAGAAAATCCTGATGCAGAGTACCCAGCAGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 |
||
| CDS-3UTR CAA 90 bp | CGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTCCTTTTAGCGCCAGCTTGCCATaGAGACACTGGATGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSSSRLPGCSRVRSSPFSASLP*RHWMAC Trigger: ACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCT...AAAAGGACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 |
||
| CDS-3UTR CAA 90 bp | ACCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACATCTACACATTAGACAGCGCCAGCTaGCCATTGAGACACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGPNKRLCSVGSTIHIYTLDSAS*PLRHWM Trigger: CATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAA...TGTGTAGATGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 |
||
| CDS CCA 90 bp | GCTTCCTGCTTAGTTTCAAAGTTAACAAAACAGTACCCTCGGGGCTaGCCCTCCAAAGCACCTGACTTATGGAAGAGGAAGTCAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASCLVSKLTKQYPRG*PSKAPDLWKRKSNC Trigger: GCAGTTTGACTTCCTCTTCCATAAGTCAGGTGCTTTGGAGGGCCAGCCCCGAGGGTACTGTTTTGTTAACTTTGAAACTAAGCAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
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| CDS-3UTR CAA 90 bp | GCTATGTCACCGGCCCTAACAAGAGACTGTGCTCTGTTGGTAGTACCATTCACAGAGACACTGGATGGCTaGTTCTGCTTCTCTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: AMSPALTRDCALLVVPFTETLDG*FCFSVI Trigger: AATCACAGAGAAGCAGAACAAGCCATCCAGTGTCTC...TGTGAATGGTACTACCAACAGAGCACAGTCTCTTGTTAGGGCCGGTGACATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCTGCTGCTCTGGTAATTCACGACCATCATCTTCGAGACTTCCAGGCTGTGAGACACTGGATGGCTaGTTCTGCTTCCTGACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CFCCSGNSRPSSSRLPGCETLDG*FCFLTY Trigger: ATAAGTCAGGAAGCAGAACAAGCCATCCAGTGTCTC...ACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATTACCAGAGCAGCAGAAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134668.2 |
||
| CDS-3UTR CAA 90 bp | AATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTTTAGACAGCGCCAGCTaGCCATTGAGACACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSRPSSSRLPGCSRVRSSLDSAS*PLRHWM Trigger: CATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAA...ACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAATTCTATATTCTAATAAGTCACCAGACAAATGGGAGCCGGTGTTCCCACGAGACACTGGATGGCTaGTTCTGCTTCCTGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEFYILISHQTNGSRCSHETLDG*FCFLLS Trigger: ACTAAGCAGGAAGCAGAACAAGCCATCCAGTGTCTC...GTGGGAACACCGGCTCCCATTTGTCTGGTGACTTATTAGAATATAGAATTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTTGGTAGTACCATTCACATCTACACAGTACAGAGGCGAAGGACTTCAATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVGSTIHIYTVQRRRTSILGSR*PIHNRC Trigger: ACACCGATTATGGATTGGCAACCTGGATCCCAAAAT...TGAAGTCCTTCGCCTCTGTACTGTGTAGATGTGAATGGTACTACCAACAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028251.10 ENSMUST00000122456.8 ENSMUST00000200733.4 |
||
| CDS-3UTR CAA 90 bp | TTCACACATAGTTCAGGGAAGACACATCCATATGAACACCCAAACACGCTATGTTCAAACTGCTTCACCTaGCCAAACTTCTGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FTHSSGKTHPYEHPNTLCSNCFT*PNFWRS Trigger: GCTCCTCCAGAAGTTTGGCAAGGTGAAGCAGTTTGA...ACATAGCGTGTTTGGGTGTTCATATGGATGTGTCTTCCCTGAACTATGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000200733.4 |
||
| CDS-3UTR CAA 90 bp | AATTCACGACCATCATCTTCGAGACTTCCAGGCTGTTCTAGAGTAAGGAGTAGTATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSRPSSSRLPGCSRVRSSILGSR*PIHNRC Trigger: ACACCGATTATGGATTGGCAACCTGGATCCCAAAAT...ACTACTCCTTACTCTAGAACAGCCTGGAAGTCTCGAAGATGATGGTCGTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122456.8 ENSMUST00000134668.2 ENSMUST00000200733.4 |
||
| CDS-3UTR CAA 90 bp | GATGGCTTGTTCTGCTTCCTGCTTAGTTTCAAAGTTAACAAAACAGTACCCTCGATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DGLFCFLLSFKVNKTVPSILGSR*PIHNRC Trigger: ACACCGATTATGGATTGGCAACCTGGATCCCAAAAT...CGAGGGTACTGTTTTGTTAACTTTGAAACTAAGCAGGAAGCAGAACAAGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
||
| CDS-3UTR CAA 90 bp | CTATGTGTGTCTCTATACTACCATGTTCATATCTCCAAGGAGACAGAGATATCTATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCVSLYYHVHISKETEISILGSR*PIHNRC Trigger: ACACCGATTATGGATTGGCAACCTGGATCCCAAAAT...AGATATCTCTGTCTCCTTGGAGATATGAACATGGTAGTATAGAGACACACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAAACAGTTCTGTGGATTCTGAAACCCCAGAAGTTAAGTCAAGTGTCTCTACCATCATTTTCAGCTTaGCTTCAATGGCTTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SETVLWILKPQKLSQVSLPSFSA*LQWLLS Trigger: AGATAAAAGCCATTGAAGCAAAGCTGAAAATGATGG...TAGAGACACTTGACTTAACTTCTGGGGTTTCAGAATCCACAGAACTGTTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS CCA 72 bp | TACCCTCGGGGCTGGCCCTCCAAAGCACCTGACTTATaGAAGAGGAAGTCAAACTGCTTCACCTTGCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: YPRGWPSKAPDL*KRKSNCFTLPN Trigger: GTTTGGCAAGGTGAAGCAGTTTGACTTCCTCTTCCATAAGTCAGGTGCTTTGGAGGGCCAGCCCCGAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS CAA 72 bp | GCCCATCGTACAACCAGCTTCTTAGACAGCGCCAGCTaGCCATTGAGACACTGGATGGCTTGTTCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AHRTTSFLDSAS*PLRHWMACSAS Trigger: AGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCTAAGAAGCTGGTTGTACGATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS CAA 72 bp | AGACAGCGCCAGCTTGCCATTGAGACACTGGATGGCTaGTTCTGCTTCTCTGTGATTTTGGGATCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RQRQLAIETLDG*FCFSVILGSRL Trigger: CAACCTGGATCCCAAAATCACAGAGAAGCAGAACAAGCCATCCAGTGTCTCAATGGCAAGCTGGCGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS CAA 90 bp | TCCAAAGCACCTGACTTATGGAAGAGGAAGTCAAACTGCTTCACCTaGCCAAACTTCTGGAGGAGCTTGAGGAGGTGGTATTCTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SKAPDLWKRKSNCFT*PNFWRSLRRWYSVI Trigger: AATCACAGAATACCACCTCCTCAAGCTCCTCCAGAAGTTTGGCAAGGTGAAGCAGTTTGACTTCCTCTTCCATAAGTCAGGTGCTTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028251.10 |
||
| CDS CAA 90 bp | GTTCTGCTTCCTGACTTATGGAAGAGGAAGTCAAACTGCTTCACCTaGCCAAACTTCTGGAGGAGCTTGAGGAGGTGGTATTCTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VLLPDLWKRKSNCFT*PNFWRSLRRWYSVI Trigger: AATCACAGAATACCACCTCCTCAAGCTCCTCCAGAAGTTTGGCAAGGTGAAGCAGTTTGACTTCCTCTTCCATAAGTCAGGAAGCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134668.2 |
||
| CDS CAA 72 bp | GGCTTGTTCTGCTTCTCTGTGATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGTCCTTCTTGTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLFCFSVILGSR*PIHNRCPSCRE Trigger: CTCTCTACAAGAAGGACACCGATTATGGATTGGCAACCTGGATCCCAAAATCACAGAGAAGCAGAACAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122456.8 |
||
| CDS CAA 72 bp | TTGAGGAGGTGGTATTCTGTGATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGTCCTTCTTGTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRRWYSVILGSR*PIHNRCPSCRE Trigger: CTCTCTACAAGAAGGACACCGATTATGGATTGGCAACCTGGATCCCAAAATCACAGAATACCACCTCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028251.10 ENSMUST00000134668.2 |
||
| CDS CAA 72 bp | GAAATTATCGGAACATCTGTGATTTTGGGATCCAGGTaGCCAATCCATAATCGGTGTCCTTCTTGTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EIIGTSVILGSR*PIHNRCPSCRE Trigger: CTCTCTACAAGAAGGACACCGATTATGGATTGGCAACCTGGATCCCAAAATCACAGATGTTCCGATAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200733.4 |
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