Pregenerated sensors for RBM15B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074102Ensembl transcript IDs: ENSMUST00000055843.9, ENSMUST00000185707.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGACACCAGCCAGTAGAAGGCTGATGGCTGCTCCTGGATGCAGCTaGAGAGAAAACAGCAAAGTCTCTGTGTTGCAGCTCTGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LTPASRRLMAAPGCS*RENSKVSVLQLCQE Trigger: CTCCTGGCAGAGCTGCAACACAGAGACTTTGCTGTTTTCTCTTCAGCTGCATCCAGGAGCAGCCATCAGCCTTCTACTGGCTGGTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 90 bp | CATACCAAAGCTGATGTGGATTTGGGCTCTAGTCCATCACAACTGTaGCTTTTCTCTATTTTCTTACCTCAGGTCTGGGTCACAACACGG | + |
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Preference number: 1 (lower is better) Translates to: HTKADVDLGSSPSQL*LFSIFLPQVWVTTR Trigger: CCGTGTTGTGACCCAGACCTGAGGTAAGAAAATAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 90 bp | CCTGCTTTGTTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTaGTGCTTTTCATTGTTCAGGATCTGTAAGAAAAACTGCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PALLQGPSCATTTLL*CFSLFRICKKNCSS Trigger: ACTGCTGCAGTTTTTCTTACAGATCCTGAACAATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAACAAAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 90 bp | CCCATACATAGGGAGATGAACACGCATGTTAATGCTTTAGAGAAGTaGTTCTCAGCCTTCCTAGTGCTGCAACCCTTTAATACACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PIHREMNTHVNALEK*FSAFLVLQPFNTLP Trigger: AGGAAGTGTATTAAAGGGTTGCAGCACTAGGAAGGCTGAGAACCACTTCTCTAAAGCATTAACATGCGTGTTCATCTCCCTATGTATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR GCA 90 bp | AACTGGCAAGGTCTAAAACTGACAAAGCATCAGGGGCTCATGCTTTaGTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTAATT | + |
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Preference number: 1 (lower is better) Translates to: NWQGLKLTKHQGLML*SACLSPSQINTKLI Trigger: AATTAACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCCTGATGCTTTGTCAGTTTTAGACCTTGCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 90 bp | ACAGAACCTGTTAACATCTTAAGGACTAAAAGGAAGTGGGTAAGATaGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGA | + |
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Preference number: 1 (lower is better) Translates to: TEPVNILRTKRKWVR*PKEEGYSGCGSSLR Trigger: TCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGATGTTAACAGGTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 90 bp | GTAGAGATGAGCACATATAATAGGAAAGCACAATTTTGGTTGACTTaGCAACACTCCCTTAGGAATGTGCCTCATGAGGCTAGGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: VEMSTYNRKAQFWLT*QHSLRNVPHEARRK Trigger: TTTTCTCCTAGCCTCATGAGGCACATTCCTAAGGGAGTGTTGTCAAGTCAACCAAAATTGTGCTTTCCTATTATATGTGCTCATCTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 90 bp | AGACATAGGACTTATCAGTCTGGTTCCTTCATACCAAAGCTGATGTaGATTTGGGCTCTAGTCCATCACAACTGTGACTTTTCTCTATTT | + |
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Preference number: 1 (lower is better) Translates to: RHRTYQSGSFIPKLM*IWALVHHNCDFSLF Trigger: AAATAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGGTATGAAGGAACCAGACTGATAAGTCCTATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGCCTTGGCCGCCTGACCCACCTCTAGTGCTAGCAGGGCTGACTGAGAGGATCTGGCTTTCTACTTaGGAGACCACAAAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TRPWPPDPPLVLAGLTERIWLST*ETTKAG Trigger: CCCTGCCTTTGTGGTCTCTCAAGTAGAAAGCCAGAT...CCTCTCAGTCAGCCCTGCTAGCACTAGAGGTGGGTCAGGCGGCCAAGGCCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGGAGCTCCTGGGAGCACGCAGTCCTCCCAAGGTAGAGATGAGCACATAGTTAACAAGTCTGGCTaGCGCTTACCCTGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LPGAPGSTQSSQGRDEHIVNKSG*RLPCLP Trigger: TGGCAGGCAGGGTAAGCGGCAGCCAGACTTGTTAAC...TATGTGCTCATCTCTACCTTGGGAGGACTGCGTGCTCCCAGGAGCTCCTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGCCGAATGGGTTGTGACCCACAGGTGGAGAGCCACTGCTTTAGAGCCTAGGGTAGGCCAGACCTaGAGCACTGGCCTGGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: KFAEWVVTHRWRATALEPRVGQT*STGLAR Trigger: TCTAGCCAGGCCAGTGCTTCAGGTCTGGCCTACCCT...AGGCTCTAAAGCAGTGGCTCTCCACCTGTGGGTCACAACCCATTCGGCAAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGACCTCAGAGGACTTGTAAGGAAGGCAGAGCCCTCCCTCCACAGTGAGAGACAGGCACTGGGTACCTaGTGTCAGCTTTCTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: PDLRGLVRKAEPSLHSERQALGT*CQLSHW Trigger: CCAGTGAGAAAGCTGACAGCAGGTACCCAGTGCCTG...TCTCTCACTGTGGAGGGAGGGCTCTGCCTTCCTTACAAGTCCTCTGAGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGAGCTCCTGGGAGCACGCAGTCCTCCCAAGGTAGAGATGAGCACATACTCTGTAGACAGGCATaGACTCCATACAGCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LPGAPGSTQSSQGRDEHILCRQA*TPYSLQ Trigger: TTGAAGGCTGTATGGAGTTCATGCCTGTCTACAGAG...TATGTGCTCATCTCTACCTTGGGAGGACTGCGTGCTCCCAGGAGCTCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | AACACGGAACACTATGTCACTCATCAAGGGCATCTTCCTGGCACTGACACCCTTCAGCACAGGCTGCTCTaGCATAGCCCTGAGAGCGAA | + |
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Preference number: 2 (lower is better) Translates to: NTEHYVTHQGHLPGTDTLQHRLL*HSPESE Trigger: TTCGCTCTCAGGGCTATGTCAGAGCAGCCTGTGCTG...AAGGGTGTCAGTGCCAGGAAGATGCCCTTGATGAGTGACATAGTGTTCCGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTGCCGAATGGGTTGTGACCCACAGGTGGAGAGCCACTGCTTTAGAGCCTACGGCATGCTCTGAGTaGAGCCTTCCATTCTTTACG | + |
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Preference number: 2 (lower is better) Translates to: KFAEWVVTHRWRATALEPTACSE*SLPFFT Trigger: CGTAAAGAATGGAAGGCTTCACTCAGAGCATGCCGT...AGGCTCTAAAGCAGTGGCTCTCCACCTGTGGGTCACAACCCATTCGGCAAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGCTGATGTGGATTTGGGCTCTAGTCCATCACAACTGTGACTTTTCTCTACCCAGGCCTTTCCTCTaGACGGGCTCAGCTTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: PKLMWIWALVHHNCDFSLPRPFL*TGSAFG Trigger: GCCGAAAGCTGAGCCCGTTCAGAGGAAAGGCCTGGG...TAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGCCAAAGGGTGCCCTTTTCCAAAGGGGTAATAAAGTGACCTGGTTCTGCGTTGTGACCCACAGGTaGAGAGCCACTGCTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: PEPKGALFQRGNKVTWFCVVTHR*RATALE Trigger: CTCTAAAGCAGTGGCTCTCCACCTGTGGGTCACAAC...GCAGAACCAGGTCACTTTATTACCCCTTTGGAAAAGGGCACCCTTTGGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCTTGATGCAACATCTCAGGCACTGGGTACCTGCTGTCAGCTTTCTCACTCTCCTCAGCCTGACTaGTTTGGACTACCAAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: FCLDATSQALGTCCQLSHSPQPD*FGLPSR Trigger: ACGGCTTGGTAGTCCAAACCAGTCAGGCTGAGGAGA...GTGAGAAAGCTGACAGCAGGTACCCAGTGCCTGAGATGTTGCATCAAGGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGAGGCTTGGTCAGGCTGGATTTGGAGAAAAACTGGCAAGGTCTAAAACTGGCTGCCGCTTACCCTaGCTGCCAACATCTTACCTC | + |
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Preference number: 2 (lower is better) Translates to: TLRLGQAGFGEKLARSKTGCRLP*LPTSYL Trigger: GAGGTAAGATGTTGGCAGGCAGGGTAAGCGGCAGCC...AGTTTTAGACCTTGCCAGTTTTTCTCCAAATCCAGCCTGACCAAGCCTCAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTCATGCTTTGCTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTACAGGGACCCAGCTGTaGTACAACAACTCTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GAHALLSLPLSFPNKYKVTGTQL*YNNSSV Trigger: CACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGT...AACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCACCCAGCTGCAGTGTCTaGGCATATTCTGACAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: DVHRCRKAAVFQHQKPIPPSCSV*AYSDRV Trigger: GACTCTGTCAGAATATGCCCAGACACTGCAGCTGGG...TGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTCATGCTTTGCTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTGCCTTTACTTTCTCATaGATACCAGCCAAAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GAHALLSLPLSFPNKYKVAFTFS*IPAKAQ Trigger: CTGGGCTTTGGCTGGTATTCATGAGAAAGTAAAGGC...AACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGAAAGGGAGAAGGTAGGTaGAGAAGGAGCAGATCTTTA | + |
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Preference number: 2 (lower is better) Translates to: WVRWPKEEGYSGCGSSLRKGEGR*RRSRSL Trigger: TAAAGATCTGCTCCTTCTCCACCTACCTTCTCCCTT...TCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTGATGCTTTTCATTCAGGATGCCACCAAATaGACCACAAAAACCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: FVTGTQLCYNNSSVMLFIQDATK*TTKTQQ Trigger: CTGCTGGGTTTTTGTGGTTCATTTGGTGGCATCCTG...AATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTGATGCTTTTCATTACAAAGCTTGAAGTTTaGCTGCAGCACAGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FVTGTQLCYNNSSVMLFITKLEV*LQHRLL Trigger: GAGCAGCCTGTGCTGCAGTCAAACTTCAAGCTTTGT...AATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGAGGCTTGGTCAGGCTGGATTTGGAGAAAAACTGGCAAGGTCTAAAACTAAAGGGGTAATAAAGTaGCCTGGTTCTGCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TLRLGQAGFGEKLARSKTKGVIK*PGSAWE Trigger: TTCCCAGGCAGAACCAGGTCACTTTATTACCCCTTT...AGTTTTAGACCTTGCCAGTTTTTCTCCAAATCCAGCCTGACCAAGCCTCAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTTAAGGACTAAAAGGAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTAGCTTGAAGTTTGACTaGAGCACAGGCTGCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ILRTKRKWVRWPKEEGYSSLKFD*STGCSD Trigger: GTCAGAGCAGCCTGTGCTGCAGTCAAACTTCAAGCT...ACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGAGCAAGACTACACAACTaGAAACTACCCTCCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: WVRWPKEEGYSGCGSSLRARLHN*KLPSIK Trigger: TTTAATGGAGGGTAGTTTTCAGTTGTGTAGTCTTGC...TCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CAA 90 bp | AAACTGGCAAGGTCTAAAACTGACAAAGCATCAGGGGCTCATGCTTaGCTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: KLARSKTDKASGAHA*LSLPLSFPNKYKVN Trigger: ATTAACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCCTGATGCTTTGTCAGTTTTAGACCTTGCCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTGATGCTTTTCATTACAGGCTTTTATAATTaGGTGCTCTGTCCAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: FVTGTQLCYNNSSVMLFITGFYN*VLCPTA Trigger: GGCTGTTGGACAGAGCACCCAATTATAAAAGCCTGT...AATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAGGAATGTGCCTCATGAGGCTAGGAGAAAACATCCACCTTCCATGTTCTGTAATGCAGATATTTTaGAGGATAGAAGTTTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: PLGMCLMRLGENIHLPCSVMQIF*RIEVCR Trigger: TCGGCAAACTTCTATCCTCCAAAATATCTGCATTAC...AGAACATGGAAGGTGGATGTTTTCTCCTAGCCTCATGAGGCACATTCCTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTAAGGACTAAAAGGAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTACAACAACTCTTCTGTaGTGCTTTTCATTGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ILRTKRKWVRWPKEEGYSTTTLL*CFSLFR Trigger: CCTGAACAATGAAAAGCATCACAGAAGAGTTGTTGT...ACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CCA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGTGTCAGCTTTCTCACTaGCTACAATGTCATGATCAA | + |
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Preference number: 2 (lower is better) Translates to: ETLLPLLREGCTGYKVNKCQLSH*LQCHDQ Trigger: TTGATCATGACATTGTAGCCAGTGAGAAAGCTGACA...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 72 bp | CAGCAAACCCCTGGGACAGACGGTGGCTCTGGCACTTaGGCCTGGCCTGAAGTTGCTGAAGGCTTTGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QQTPGTDGGSGT*AWPEVAEGFVR Trigger: CCTCACAAAGCCTTCAGCAACTTCAGGCCAGGCTCAAGTGCCAGAGCCACCGTCTGTCCCAGGGGTTTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 72 bp | AGGACTTGTAAGGAAGGCAGAGCCCTCCCTCCACAGTaGGAGAACACCGCCTCCCACAGCAAACCCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: RTCKEGRALPPQ*ENTASHSKPLG Trigger: TCCCAGGGGTTTGCTGTGGGAGGCGGTGTTCTCTCACTGTGGAGGGAGGGCTCTGCCTTCCTTACAAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 72 bp | CCTGCTGGCCAGCAGCTAAGTTTGACAAGTGTGAGCTaGGCCCCGATAGCACAAAGAGCTGCGCAGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: PAGQQLSLTSVS*APIAQRAAQDQ Trigger: CTGGTCCTGCGCAGCTCTTTGTGCTATCGGGGCCCAGCTCACACTTGTCAAACTTAGCTGCTGGCCAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CAA 90 bp | ATCTTACCTCCAAGACCCCTGGCAGTCAGGCAGATGACTGATAGGGGAGACCCTGGCCAGCAGCTAAGTTaGACAAGTGTGAGCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: ILPPRPLAVRQMTDRGDPGQQLS*TSVSWA Trigger: GGCCCAGCTCACACTTGTCAAACTTAGCTGCTGGCC...AGGGTCTCCCCTATCAGTCATCTGCCTGACTGCCAGGGGTCTTGGAGGTAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCTCAGAGGACTTGTAAGGAAGGCAGAGCCCTCCCTCCACAGTGAGAGAAGCAAAGTCTCTGTGTaGCAGCTCTGCCAGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PDLRGLVRKAEPSLHSERSKVSV*QLCQEL Trigger: GAGCTCCTGGCAGAGCTGCAACACAGAGACTTTGCT...TCTCTCACTGTGGAGGGAGGGCTCTGCCTTCCTTACAAGTCCTCTGAGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 72 bp | AGCCAAAGGGTGCCCTTTTCCAAAGGGGTAATAAAGTaGCCTGGTTCTGCCTGGGAAGGGTACCCGGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: SQRVPFSKGVIK*PGSAWEGYPGE Trigger: TTCACCCGGGTACCCTTCCCAGGCAGAACCAGGTCACTTTATTACCCCTTTGGAAAAGGGCACCCTTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 72 bp | GCCAGTAGAAGGCTGATGGCTGCTCCTGGATGCAGCTaGAGAGAAAACAGCAAAGTCTCTGTGTTGCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: ASRRLMAAPGCS*RENSKVSVLQL Trigger: GAGCTGCAACACAGAGACTTTGCTGTTTTCTCTTCAGCTGCATCCAGGAGCAGCCATCAGCCTTCTACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 72 bp | CTGGCACTGACACCCTTGCAGACTGAGCAGTGTAGTTaGGGGGTCTGTTTGCCACAAAGCTTGAAGTTTGAC | + |
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Preference number: 3 (lower is better) Translates to: LALTPLQTEQCS*GVCLPQSLKFD Trigger: GTCAAACTTCAAGCTTTGTGGCAAACAGACCCCCCAACTACACTGCTCAGTCTGCAAGGGTGTCAGTGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 72 bp | TCTCAGGCACTGGGTACCTGCTGTCAGCTTTCTCACTaGCTACAATGTCATGATCAAACAAGGCCTTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: SQALGTCCQLSH*LQCHDQTRPWP Trigger: CGGCCAAGGCCTTGTTTGATCATGACATTGTAGCCAGTGAGAAAGCTGACAGCAGGTACCCAGTGCCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 72 bp | GGTAAGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTaGTTCTTCACTAAGAAACAGATGATCGCCAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: GKMAQGRRLQWV*FFTKKQMIARA Trigger: GGCTCTGGCGATCATCTGTTTCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CCA 72 bp | GAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTaGGTGTGGTTCTTCACTAAGAAACAGATGATCGCC | + |
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Preference number: 3 (lower is better) Translates to: EVGKMAQGRRLQ*VWFFTKKQMIA Trigger: GGCGATCATCTGTTTCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CAA 90 bp | CCCTTAGGAATGTGCCTCATGAGGCTAGGAGAAAACATCCACCTTCCATGTTCTTGTTTGCCACAAAGCTaGAAGTTTGACTGCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: PLGMCLMRLGENIHLPCSCLPQS*KFDCST Trigger: TGTGCTGCAGTCAAACTTCAAGCTTTGTGGCAAACA...AGAACATGGAAGGTGGATGTTTTCTCCTAGCCTCATGAGGCACATTCCTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR GCA 72 bp | TTTTGCCTTGATGCAACATCTCAGGCACTGGGTACCTaGTGTCAGCTTTCTCACTGGCTACAATGTCATGAT | + |
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Preference number: 3 (lower is better) Translates to: FCLDATSQALGT*CQLSHWLQCHD Trigger: ATCATGACATTGTAGCCAGTGAGAAAGCTGACAGCAGGTACCCAGTGCCTGAGATGTTGCATCAAGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR-3UTR CAA 90 bp | TTTTGCCTTGATGCAACATCTCAGGCACTGGGTACCTGCTGTCAGCTTTCTCACTGTAATGCAGATATTTaGGAGGATAGAAGTTTGCCG | + |
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Preference number: 3 (lower is better) Translates to: FCLDATSQALGTCCQLSHCNADI*EDRSLP Trigger: CGGCAAACTTCTATCCTCCAAAATATCTGCATTACA...GTGAGAAAGCTGACAGCAGGTACCCAGTGCCTGAGATGTTGCATCAAGGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR TCA 72 bp | GCTGATGTGGATTTGGGCTCTAGTCCATCACAACTGTaGCTTTTCTCTATTTTCTTACCTCAGGTCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ADVDLGSSPSQL*LFSIFLPQVWV Trigger: GACCCAGACCTGAGGTAAGAAAATAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR TCA 72 bp | TCCAGTCTCTTAAATTTCTGTCTCTGTAGACAGGCATaGACTCCATACAGCCTTCAAGGTCCATCTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLNFCLCRQA*TPYSLQGPSQS Trigger: GCTCTGAGATGGACCTTGAAGGCTGTATGGAGTTCATGCCTGTCTACAGAGACAGAAATTTAAGAGACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGAGGCTTGGTCAGGCTGGATTTGGAGAAAAACTGGCAAGGTCTAAAACTAAAGCTGATGTGGATTaGGGCTCTAGTCCATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRLGQAGFGEKLARSKTKADVD*GSSPSQ Trigger: TTGTGATGGACTAGAGCCCAAATCCACATCAGCTTT...AGTTTTAGACCTTGCCAGTTTTTCTCCAAATCCAGCCTGACCAAGCCTCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR GCA 72 bp | AAACTACCCTCCATTAAACAGGCTTTTATAATTGGGTaGTCTGTCCAACAGCCATCGCCCAAACTAAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KLPSIKQAFIIG*SVQQPSPKLKH Trigger: GTGCTTTAGTTTGGGCGATGGCTGTTGGACAGAGCACCCAATTATAAAAGCCTGTTTAATGGAGGGTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR CCA 72 bp | CAGTCTGGTTCCTTCATACCAAAGCTGATGTGGATTTaGGCTCTAGTCCATCACAACTGTGACTTTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QSGSFIPKLMWI*ALVHHNCDFSL Trigger: TAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGGTATGAAGGAACCAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR CCA 72 bp | GTTAACATCTTAAGGACTAAAAGGAAGTGGGTAAGATaGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VNILRTKRKWVR*PKEEGYSGCGS Trigger: AGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGATGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR CCA 72 bp | ACTTATCAGTCTGGTTCCTTCATACCAAAGCTGATGTaGATTTGGGCTCTAGTCCATCACAACTGTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TYQSGSFIPKLM*IWALVHHNCDF Trigger: AAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGGTATGAAGGAACCAGACTGATAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR TCA 72 bp | GAACTTAGTTTTAGCAGTAGACAGGATGCCACCAAATaGACCACAAAAACCCAGCAGAGAATTCAAACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ELSFSSRQDATK*TTKTQQRIQTK Trigger: CTTGGTTTGAATTCTCTGCTGGGTTTTTGTGGTTCATTTGGTGGCATCCTGTCTACTGCTAAAACTAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR TCA 72 bp | TTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTaGTGCTTTTCATTGTTCAGGATCTGTAAGAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LQGPSCATTTLL*CFSLFRICKKN Trigger: GTTTTTCTTACAGATCCTGAACAATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR CCA 72 bp | ACTTTGCTACTGTTACAAATTGTAATGCAGATATTTTaGAGGATAGAAGTTTGCCGAATGGGTTGTGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLLLLQIVMQIF*RIEVCRMGCDP Trigger: TGGGTCACAACCCATTCGGCAAACTTCTATCCTCCAAAATATCTGCATTACAATTTGTAACAGTAGCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| 3UTR GCA 72 bp | CCTCATGTTGTGGTTACTCCAACCATGTTATTTTGTTaGTACTTCATAACTGTAACTTTGCTACTGTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PHVVVTPTMLFC*YFITVTLLLLQ Trigger: TTGTAACAGTAGCAAAGTTACAGTTATGAAGTAGCAACAAAATAACATGGTTGGAGTAACCACAACATGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCCATCTCAGAGCCCAGGGGTCACAGGTGCTGGCTCAGGGTAGGCCAGACCACTCCGGAGCCGCGGTaGAGCCCGGACCCGCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSISEPRGHRCWLRVGQTTPEPR*SPDPRV Trigger: AACCCGCGGGTCCGGGCTCCACCGCGGCTCCGGAGT...GGTCTGGCCTACCCTGAGCCAGCACCTGTGACCCCTGGGCTCTGAGATGGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAGCTCCTGGGAGCACGCAGTCCTCCCAAGGTAGAGATGAGCACATATGGAGGCGGCGGCGCTaGTGCTGCTACTGCGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGAPGSTQSSQGRDEHIWRRRR*CCYCAG Trigger: GCCGGCGCAGTAGCAGCAGCAGCGCCGCCGCCTCCA...TATGTGCTCATCTCTACCTTGGGAGGACTGCGTGCTCCCAGGAGCTCCTGGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGAGCTCCTGGGAGCACGCAGTCCTCCCAAGGTAGAGATGAGCACATACACGCCCGCTCGGGCTaGAGTCTCGCTCGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGAPGSTQSSQGRDEHIHARSG*SLARSA Trigger: GGCAGAGCGAGCGAGACTCCAGCCCGAGCGGGCGTG...TATGTGCTCATCTCTACCTTGGGAGGACTGCGTGCTCCCAGGAGCTCCTGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCATGAACTCCATACAGCCTTCAAGGTCCATCTCAGAGCCCAGGGGTCACCCGCTTGGCGGACGATaGCGAGCCACGCCCGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGMNSIQPSRSISEPRGHPLGGR*RATPAR Trigger: CCGAGCGGGCGTGGCTCGTCATCGTCCGCCAAGCGG...GTGACCCCTGGGCTCTGAGATGGACCTTGAAGGCTGTATGGAGTTCATGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCCTTGGCCGCCTGACCCACCTCTAGTGCTAGCAGGGCTGACTGAGAGGACTCCGGCTGCGAACTaGGCGGCTATAGCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRPWPPDPPLVLAGLTERTPAAN*AAIALQ Trigger: CTGGAGGGCTATAGCCGCTCAGTTCGCAGCCGGAGT...CCTCTCAGTCAGCCCTGCTAGCACTAGAGGTGGGTCAGGCGGCCAAGGCCTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGCCAAAGGGTGCCCTTTTCCAAAGGGGTAATAAAGTGACCTGGTTCTGCAGGCGGCGGCGCTGCTaGTGCTACTGCGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEPKGALFQRGNKVTWFCRRRRC*CYCAGC Trigger: GCAGCCGGCGCAGTAGCAGCAGCAGCGCCGCCGCCT...GCAGAACCAGGTCACTTTATTACCCCTTTGGAAAAGGGCACCCTTTGGCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCCATCTCAGAGCCCAGGGGTCACAGGTGCTGGCTCAGGGTAGGCCAGACCGTCCGCAGCGCTGACTaGAGGTACTGCTGTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSISEPRGHRCWLRVGQTVRSAD*RYCCEK Trigger: CTTTTCACAGCAGTACCTCCAGTCAGCGCTGCGGAC...GGTCTGGCCTACCCTGAGCCAGCACCTGTGACCCCTGGGCTCTGAGATGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTTGCCGAATGGGTTGTGACCCACAGGTGGAGAGCCACTGCTTTAGAGCCTCAGCTCCGGGGTGTGTaGCAGGCGCAGGCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFAEWVVTHRWRATALEPQLRGV*QAQADL Trigger: GAGATCAGCCTGCGCCTGTCACACACCCCGGAGCTG...AGGCTCTAAAGCAGTGGCTCTCCACCTGTGGGTCACAACCCATTCGGCAAACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | CCAGACCTCAGAGGACTTGTAAGGAAGGCAGAGCCCTCCCTCCACAGTGAGAGACCGAACCGCTTGAACTaGTGGAAGAGCCGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDLRGLVRKAEPSLHSERPNRLN*WKSRSS Trigger: GGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGG...TCTCTCACTGTGGAGGGAGGGCTCTGCCTTCCTTACAAGTCCTCTGAGGTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCCTGCTGGCCAGCAGCTAAGTTTGACAAGTGTGAGCTGGGCCCCGATACTCCCGCGCGTCCTGTaGGTGCCGGAAGTTCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: CKPAGQQLSLTSVSWAPILPRVL*VPEVHV Trigger: TACGTGAACTTCCGGCACCCACAGGACGCGCGGGAG...TATCGGGGCCCAGCTCACACTTGTCAAACTTAGCTGCTGGCCAGCAGGCTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGCCAAAGGGTGCCCTTTTCCAAAGGGGTAATAAAGTGACCTGGTTCTGCCCTCGCTCAGACTGCTaGCCCCCACCCTTGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEPKGALFQRGNKVTWFCPRSDC*PPPLVL Trigger: CAGGACCAAGGGTGGGGGGCAGCAGTCTGAGCGAGG...GCAGAACCAGGTCACTTTATTACCCCTTTGGAAAAGGGCACCCTTTGGCTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAAAAACAACAAAACTACCTGTAGCTGTTGGCACAGGTCTTAGGCCCAGGCCGGGACCGGGTGCTTaGTACCGCCGGAGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGKTTKLPVAVGTGLRPRPGPGA*YRRRPC Trigger: ACAAGGCCTCCGGCGGTACCAAGCACCCGGTCCCGG...CCTGGGCCTAAGACCTGTGCCAACAGCTACAGGTAGTTTTGTTGTTTTTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | CCAGACCTCAGAGGACTTGTAAGGAAGGCAGAGCCCTCCCTCCACAGTGAGAGACATGTCTGCTGTTGCTaGGGGAGTTGCTGCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PDLRGLVRKAEPSLHSERHVCCC*GSCCLT Trigger: AGTCAGGCAGCAACTCCCTCAGCAACAGCAGACATG...TCTCTCACTGTGGAGGGAGGGCTCTGCCTTCCTTACAAGTCCTCTGAGGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCATGAACTCCATACAGCCTTCAAGGTCCATCTCAGAGCCCAGGGGTCACCTGGAGGTACTGCTGTaGAAAGTCGCAGGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGMNSIQPSRSISEPRGHLEVLL*KVAGRE Trigger: TTCCCGCCCTGCGACTTTTCACAGCAGTACCTCCAG...GTGACCCCTGGGCTCTGAGATGGACCTTGAAGGCTGTATGGAGTTCATGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCTGATGTGGATTTGGGCTCTAGTCCATCACAACTGTGACTTTTCTCTATGCTACTGCGCCGGCTaGTCCCGCCGCCGCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKLMWIWALVHHNCDFSLCYCAG*SRRRAG Trigger: ACCTGCGCGGCGGCGGGAGCAGCCGGCGCAGTAGCA...TAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCCATCTCAGAGCCCAGGGGTCACAGGTGCTGGCTCAGGGTAGGCCAGACCTTTGGTCTCGTGTTTTaGCTCTTCAAGAGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSISEPRGHRCWLRVGQTFGLVF*LFKSLG Trigger: CCCAAGACTCTTGAAGAGCCAAAACACGAGACCAAA...GGTCTGGCCTACCCTGAGCCAGCACCTGTGACCCCTGGGCTCTGAGATGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGTCTAAAACTGACAAAGCATCAGGGGCTCATGCTTTGCTCAGCCTGCCTCTCTCCCCGAACCGCTTaGACTGGTGGAAGAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLKLTKHQGLMLCSACLSPRTA*TGGRAG Trigger: ACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGA...GAGGCAGGCTGAGCAAAGCATGAGCCCCTGATGCTTTGTCAGTTTTAGACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGAAAAACAACAAAACTACCTGTAGCTGTTGGCACAGGTCTTAGGCCCAGGACACCGGCTCCACCTTaGGCGGGCGATCGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGKTTKLPVAVGTGLRPRTPAPP*AGDRRA Trigger: TGCTCTACGATCGCCCGCTCAAGGTGGAGCCGGTGT...CCTGGGCCTAAGACCTGTGCCAACAGCTACAGGTAGTTTTGTTGTTTTTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTACTCCGGCTGCGAACTaGGCGGCTATAGCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESSCFSTPEAHSNPAAVSTPAAN*AAIALQ Trigger: CTGGAGGGCTATAGCCGCTCAGTTCGCAGCCGGAGT...AGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAGGACTAAAAGGAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTAGCCGGTCCTCCAAGTaGTCGGCCGGCAGCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILRTKRKWVRWPKEEGYSSRSSK*SAGSAG Trigger: CCCCGCGCTGCCGGCCGAGCACTTGGAGGACCGGCT...ACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTAAGGACTAAAAGGAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTCGGCGGCGCTGCTGCTaGTACTGCGCCGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRTKRKWVRWPKEEGYSRRRCC*YCAGCS Trigger: GGAGCAGCCGGCGCAGTAGCAGCAGCAGCGCCGCCG...ACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCATGCTTTGCTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTCCGGAGCCTGCGATCTaGACCACCCAAGGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAHALLSLPLSFPNKYKVPEPAI*TTQGEA Trigger: GGCTTCCCCTTGGGTGGTCCAGATCGCAGGCTCCGG...AACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTCAAGGATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCGGAGCCTGCGATCTaGACCACCCAAGGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLKDVHRCRKAAVFQHQKPEPAI*TTQGEA Trigger: GGCTTCCCCTTGGGTGGTCCAGATCGCAGGCTCCGG...CTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATCCTTGAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTACCTCCAAGACCCCTGGCAGTCAGGCAGATGACTGATAGGGGAGACCCTTGGGCTCTGCCTCAGTaGTCCGATGATTGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILPPRPLAVRQMTDRGDPWALPQ*SDDCVH Trigger: GTGAACGCAATCATCGGACCACTGAGGCAGAGCCCA...AGGGTCTCCCCTATCAGTCATCTGCCTGACTGCCAGGGGTCTTGGAGGTAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCATGAACTCCATACAGCCTTCAAGGTCCATCTCAGAGCCCAGGGGTCACGGTCTGAACTTTTACTaGGGCTGGTCCAGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGMNSIQPSRSISEPRGHGLNFY*GWSSPL Trigger: AAGGGGACTGGACCAGCCTCAGTAAAAGTTCAGACC...GTGACCCCTGGGCTCTGAGATGGACCTTGAAGGCTGTATGGAGTTCATGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAAACATCCACCTTCCATGTTCTTCCTAGGGTTCACAACCCGAGTCACTTCGTCCAGCTTGGGCTaGTCCAGTCGAAGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKHPPSMFFLGFTTRVTSSSLG*SSRRRW Trigger: CCAGCGCCTTCGACTGGATCAGCCCAAGCTGGACGA...AGTGACTCGGGTTGTGAACCCTAGGAAGAACATGGAAGGTGGATGTTTTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTGGAGGGAGTTGCTGCCTaGCTCCTTGGTCCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KAAVFQHQKPIPTQLQCLEGVAA*LLGPFT Trigger: GGTGAAGGGACCAAGGAGTCAGGCAGCAACTCCCTC...CAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCATGCTTTGCTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTCCCCACCCTTGGTCCTaGTGCGTTCCTCGTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAHALLSLPLSFPNKYKVPHPWS*CVPRKG Trigger: CCCCTTACGAGGAACGCAGCAGGACCAAGGGTGGGG...AACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCTTGATGCAACATCTCAGGCACTGGGTACCTGCTGTCAGCTTTCTCACTGGAGTGGTTCTCCTTaGGGCTACGCTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLDATSQALGTCCQLSHWSGSP*GYAQGC Trigger: GCACCCCTGAGCGTAGCCGCAAGGAGAACCACTCCA...GTGAGAAAGCTGACAGCAGGTACCCAGTGCCTGAGATGTTGCATCAAGGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGGCTCCCGCGGCCGCTTaGCGGACGATGACGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETLLPLLREGCTGYKVNKAPAAA*RTMTSH Trigger: GTGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGC...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | AACACGGAACACTATGTCACTCATCAAGGGCATCTTCCTGGCACTGACACCCTTGGTCCGGTCTCGGTCTaGATACAGAAGGTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTEHYVTHQGHLPGTDTLGPVSV*IQKVWR Trigger: CCTCCACACCTTCTGTATTCAGACCGAGACCGGACC...AAGGGTGTCAGTGCCAGGAAGATGCCCTTGATGAGTGACATAGTGTTCCGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTGGTCCGGTCTCGGTCTaGATACAGAAGGTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSCFSTPEAHSNPAAVSGPVSV*IQKVWR Trigger: CCTCCACACCTTCTGTATTCAGACCGAGACCGGACC...AGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGAAACAGAGGCTACGCTCAGGGGTaGGATCTGAGCCTCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWPKEEGYSGCGSSLRNRGYAQG*DLSLAQ Trigger: CTGAGCGAGGCTCAGATCGCACCCCTGAGCGTAGCC...TCTGTTTCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTGGAGTCTCCTCGGCTTTaGCAAAATCCACCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAAVFQHQKPIPTQLQCLESPRL*QNPPGA Trigger: GGCTCCGGGTGGATTTTGCCAAAGCCGAGGAGACTC...CAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAAAAACAACAAAACTACCTGTAGCTGTTGGCACAGGTCTTAGGCCCAGGCCTTGGTCCCTTCACTaGAGTGGTTCTCCTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGKTTKLPVAVGTGLRPRPWSLH*SGSPCG Trigger: GCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGG...CCTGGGCCTAAGACCTGTGCCAACAGCTACAGGTAGTTTTGTTGTTTTTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CCA 90 bp | CCAGACCTCAGAGGACTTGTAAGGAAGGCAGAGCCCTCCCTCCACAGTGAGAGACTAGTCTTTTTCCCATaGGAAGAGTCTGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDLRGLVRKAEPSLHSERLVFFP*EESGAS Trigger: TGAGGCTCCAGACTCTTCCCATGGGAAAAAGACTAG...TCTCTCACTGTGGAGGGAGGGCTCTGCCTTCCTTACAAGTCCTCTGAGGTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR TCA 90 bp | ACTTTGAGGCTTGGTCAGGCTGGATTTGGAGAAAAACTGGCAAGGTCTAAAACTCTCAGGGGTGCGATCTaGGCCTCGCTCAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRLGQAGFGEKLARSKTLRGAI*ASLRLL Trigger: CAGCAGTCTGAGCGAGGCTCAGATCGCACCCCTGAG...AGTTTTAGACCTTGCCAGTTTTTCTCCAAATCCAGCCTGACCAAGCCTCAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | AACACGGAACACTATGTCACTCATCAAGGGCATCTTCCTGGCACTGACACCCTTTCCAGTCGAAGGCGCTaGGCAATCTTTAGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTEHYVTHQGHLPGTDTLSSRRR*AIFSWV Trigger: GACCCAGCTAAAGATTGCCCAGCGCCTTCGACTGGA...AAGGGTGTCAGTGCCAGGAAGATGCCCTTGATGAGTGACATAGTGTTCCGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR TCA 90 bp | AGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGAAACAGAGAGGGAGTTGCTGCCTaGCTCCTTGGTCCCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RWPKEEGYSGCGSSLRNREGVAA*LLGPFT Trigger: AGTGAAGGGACCAAGGAGTCAGGCAGCAACTCCCTC...TCTGTTTCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR TCA 90 bp | CCCTCAAGGATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCATGTCTGCTGTTGCTaGGGGAGTTGCTGCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PSRMCIDVGKQLFFNTRSHVCCC*GSCCLT Trigger: AGTCAGGCAGCAACTCCCTCAGCAACAGCAGACATG...GCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATCCTTGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR TCA 90 bp | AGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGAAACAGAAGGAGACTAGGTTCCTaGGAAGCCGCCTCTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWPKEEGYSGCGSSLRNRRRLGS*EAASVG Trigger: GCCTACAGAGGCGGCTTCTCAGGAACCTAGTCTCCT...TCTGTTTCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR GCA 90 bp | AAGGATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTGCTCACCACTCCGGCTaGGAACTGAGCGGCTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDVHRCRKAAVFQHQKPIAHHSG*ELSGYS Trigger: GCTATAGCCGCTCAGTTCGCAGCCGGAGTGGTGAGC...AATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR GCA 90 bp | CATCACAGCTACAGAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTAGCTGACTGGAGGTACTaGTGTGAAAAGTCGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHSYRNPTPFAERRVYWLADWRY*CEKSQG Trigger: GCCCTGCGACTTTTCACAGCAGTACCTCCAGTCAGC...TAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTCTGTAGCTGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | ATCTTAAGGACTAAAAGGAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTTCCTCCCACGGTCACTaGAGAGGCTCCTCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILRTKRKWVRWPKEEGYSSSHGH*RGSSAC Trigger: GCAAGCGGAGGAGCCTCTCCAGTGACCGTGGGAGGA...ACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | CCCTTAGGAATGTGCCTCATGAGGCTAGGAGAAAACATCCACCTTCCATGTTCTTGCTGCCTGACTCCTTaGTCCCTTCACTGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLGMCLMRLGENIHLPCSCCLTP*SLHWSG Trigger: ACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCA...AGAACATGGAAGGTGGATGTTTTCTCCTAGCCTCATGAGGCACATTCCTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGCCAAAGGGTGCCCTTTTCCAAAGGGGTAATAAAGTGACCTGGTTCTGCTGGGCAATCTTTAGCTaGGTCAGCTTGCTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PEPKGALFQRGNKVTWFCWAIFS*VSLLPE Trigger: TTCTGGCAGCAAGCTGACCCAGCTAAAGATTGCCCA...GCAGAACCAGGTCACTTTATTACCCCTTTGGAAAAGGGCACCCTTTGGCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR TCA 90 bp | CCCTTAGGAATGTGCCTCATGAGGCTAGGAGAAAACATCCACCTTCCATGTTCTCTGTCTCCTTTGACGTaGTCGATGGTCCGAATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLGMCLMRLGENIHLPCSLSPLT*SMVRML Trigger: GAGCATTCGGACCATCGATCACGTCAAAGGAGACAG...AGAACATGGAAGGTGGATGTTTTCTCCTAGCCTCATGAGGCACATTCCTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR TCA 90 bp | CCCTCAAGGATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCGGTCTGAACTTTTACTaGGGCTGGTCCAGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRMCIDVGKQLFFNTRSGLNFY*GWSSPL Trigger: AAGGGGACTGGACCAGCCTCAGTAAAAGTTCAGACC...GCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATCCTTGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR GCA 90 bp | ATCTTAAGGACTAAAAGGAAGTGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTGCTCACCACTCCGGCTaGGAACTGAGCGGCTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILRTKRKWVRWPKEEGYSAHHSG*ELSGYS Trigger: GCTATAGCCGCTCAGTTCGCAGCCGGAGTGGTGAGC...ACTGTAACCTTCTTCCTTGGGCCATCTTACCCACTTCCTTTTAGTCCTTAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR GCA 90 bp | AACACGGAACACTATGTCACTCATCAAGGGCATCTTCCTGGCACTGACACCCTTTTAGCTGGGTCAGCTTaGTGCCAGAAGGATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTEHYVTHQGHLPGTDTLLAGSA*CQKDGL Trigger: AAGACCATCCTTCTGGCAGCAAGCTGACCCAGCTAA...AAGGGTGTCAGTGCCAGGAAGATGCCCTTGATGAGTGACATAGTGTTCCGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | ACTTTGAGGCTTGGTCAGGCTGGATTTGGAGAAAAACTGGCAAGGTCTAAAACTGAGTCTCCTCGGCTTTaGCAAAATCCACCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRLGQAGFGEKLARSKTESPRL*QNPPGA Trigger: GGCTCCGGGTGGATTTTGCCAAAGCCGAGGAGACTC...AGTTTTAGACCTTGCCAGTTTTTCTCCAAATCCAGCCTGACCAAGCCTCAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | GATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCATGGGCTCTGCCTCAGTaGTCCGATGATTGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DVHRCRKAAVFQHQKPIPWALPQ*SDDCVH Trigger: GTGAACGCAATCATCGGACCACTGAGGCAGAGCCCA...TGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR CCA 90 bp | CATCACAGCTACAGAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTACCCAGCTGCAGTGTCTaGGCATATTCTGACAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHSYRNPTPFAERRVYWLPSCSV*AYSDRV Trigger: GACTCTGTCAGAATATGCCCAGACACTGCAGCTGGG...TAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTCTGTAGCTGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | AGGAGAAAACATCCACCTTCCATGTTCTTCCTAGGGTTCACAACCCGAGTCACTTTGCTGCCAGAAGGATaGTCTTTGAGGAGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKHPPSMFFLGFTTRVTLLPEG*SLRRPL Trigger: CAGTGGCCTCCTCAAAGACCATCCTTCTGGCAGCAA...AGTGACTCGGGTTGTGAACCCTAGGAAGAACATGGAAGGTGGATGTTTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR TCA 90 bp | TGGGTAAGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGACCAGATTCTGAAACTTaGGGAAGGCATAGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WVRWPKEEGYSGCGSSLRPDSET*GRHRHH Trigger: GTGGTGCCTATGCCTTCCTCAAGTTTCAGAATCTGG...TCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCTTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR GCA 90 bp | AGGAGAAAACATCCACCTTCCATGTTCTTCCTAGGGTTCACAACCCGAGTCACTCAAGCTGATCACCCCTaGAGCCTGCTTCTGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRKHPPSMFFLGFTTRVTQADHP*SLLLFQ Trigger: TTGAAACAGAAGCAGGCTGCAGGGGTGATCAGCTTG...AGTGACTCGGGTTGTGAACCCTAGGAAGAACATGGAAGGTGGATGTTTTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | AAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTGCTAGTCTTTTTCCCATaGGAAGAGTCTGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAAVFQHQKPIPTQLQCLLVFFP*EESGAS Trigger: TGAGGCTCCAGACTCTTCCCATGGGAAAAAGACTAG...CAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR CCA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGTGGGGGTTGACTGGATaGCCAGGAGCACAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETLLPLLREGCTGYKVNKWGLTG*PGAQHS Trigger: GCTATGCTGTGCTCCTGGCCATCCAGTCAACCCCCA...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | CATCACAGCTACAGAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTACGTAGCCTATCTTTATaGGGTTTCTGCCAATCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HHSYRNPTPFAERRVYWLRSLSL*GFCQSP Trigger: GGGTGATTGGCAGAAACCCCATAAAGATAGGCTACG...TAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTCTGTAGCTGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGCTGATGTGGATTTGGGCTCTAGTCCATCACAACTGTGACTTTTCTCTACCATTCCAACCCAGCTaGAGTGTCTGGGCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLMWIWALVHHNCDFSLPFQPS*SVWAYS Trigger: AGAATATGCCCAGACACTGCAGCTGGGTTGGAATGG...TAGAGAAAAGTCACAGTTGTGATGGACTAGAGCCCAAATCCACATCAGCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR GCA 90 bp | TTTGTTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTGATGCTTTTCATTGGAAGGCATAGAGCATaGCTGTGTTGTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FVTGTQLCYNNSSVMLFIGRHRA*LCCLCP Trigger: AGGGCAGAGACAACACAGGCATGCTCTATGCCTTCC...AATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CCA 90 bp | GTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCTTTGGTCTCGTGTTTTaGCTCTTCAAGAGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHRCRKAAVFQHQKPIPTFGLVF*LFKSLG Trigger: CCCAAGACTCTTGAAGAGCCAAAACACGAGACCAAA...GGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR GCA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGGATCGATGGTCCGAATaGTCCCGAAGCGATCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ETLLPLLREGCTGYKVNKDRWSE*SRSDRI Trigger: AATTCGATCGCTTCGGGAGCATTCGGACCATCGATC...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| 3UTR CAA 72 bp | TCCTCATGTTGTGGTTACTCCAACCATGTTATTTTGTaGCTACTTCATAACTGTAACTTTGCTACTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSCCGYSNHVIL*LLHNCNFATVT Trigger: TGTAACAGTAGCAAAGTTACAGTTATGAAGTAGCAACAAAATAACATGGTTGGAGTAACCACAACATGAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 90 bp | GCCGCCCGCCCGCCTCTGCCTCTCGTTCGCGCTCCCGCGGCCGCTTaGCGGACGATGACGAGCCACGCCCGCTCGGGCTGGAGTCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AARPPLPLVRAPAAA*RTMTSHARSGWSLA Trigger: AGCGAGACTCCAGCCCGAGCGGGCGTGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGCGCGAACGAGAGGCAGAGGCGGGCGGGCGGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | CGCCTCTGCCTCTCGTTCGCGCTCCCGCGGCCGCTTGGCGGACGATaGCGAGCCACGCCCGCTCGGGCTGGAGTCTCGCTCGCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLCLSFALPRPLGGR*RATPARAGVSLALP Trigger: CGGCAGAGCGAGCGAGACTCCAGCCCGAGCGGGCGTGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGCGCGAACGAGAGGCAGAGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | TGGCTCCACCACGGGCATGCCCTCGGCGCCAGGCCCGCTGGGGGTTaGCTGGATGGCCAGGAGCACAGCATAGCCATTAGGGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLHHGHALGARPAGG*LDGQEHSIAIRAPL Trigger: CAGGGGAGCCCTAATGGCTATGCTGTGCTCCTGGCCATCCAGTCAACCCCCAGCGGGCCTGGCGCCGAGGGCATGCCCGTGGTGGAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 90 bp | GGGGTGTGTGACAGGCGCAGGCTGATCTCCCCGAACCGCTTGAACTaGTGGAAGAGCCGGTCCTCCAAGTGCTCGGCCGGCAGCGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVCDRRRLISPNRLN*WKSRSSKCSAGSAG Trigger: CCCCGCGCTGCCGGCCGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTCACACACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 90 bp | GTGTGTGACAGGCGCAGGCTGATCTCCCCGAACCGCTTGAACTGGTaGAAGAGCCGGTCCTCCAAGTGCTCGGCCGGCAGCGCGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCDRRRLISPNRLNW*KSRSSKCSAGSAGL Trigger: GAGCCCCGCGCTGCCGGCCGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTCACACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | AGGTCCATCTCAGAGCCCAGGGGTCACAGGTGCTGGCTCAGGGTAGGCCAGACCCAGGCCCGCTGGGGGTaGACTGGATGGCCAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSISEPRGHRCWLRVGQTQARWG*TGWPGA Trigger: TGCTCCTGGCCATCCAGTCAACCCCCAGCGGGCCTG...GGTCTGGCCTACCCTGAGCCAGCACCTGTGACCCCTGGGCTCTGAGATGGACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | GTGCCGGAAGTTCACGTAGGCCACGCGGCCCAGCTCCGGGGTGTGTaGCAGGCGCAGGCTGATCTCCCCGAACCGCTTGAACTGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VPEVHVGHAAQLRGV*QAQADLPEPLELVE Trigger: TTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTCACACACCCCGGAGCTGGGCCGCGTGGCCTACGTGAACTTCCGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 90 bp | GGGAGTGAGTTGTCCTCCCACGGTCACTGGAGAGGCTCCTCCGCTTaGGTCTCTCTTCCCAGGGCTTGGCTATGCTCCGGTCCCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSELSSHGHWRGSSA*VSLPRAWLCSGPHH Trigger: GTGATGGGGACCGGAGCATAGCCAAGCCCTGGGAAGAGAGACGCAAGCGGAGGAGCCTCTCCAGTGACCGTGGGAGGACAACTCACTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | GGGCTCCCCTGCTTGATTCGCCGGGTGACCTCGTCCAGCTTGGGCTaGTCCAGTCGAAGGCGCTGGGCAATCTTTAGCTGGGTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLPCLIRRVTSSSLG*SSRRRWAIFSWVSL Trigger: CAAGCTGACCCAGCTAAAGATTGCCCAGCGCCTTCGACTGGATCAGCCCAAGCTGGACGAGGTCACCCGGCGAATCAAGCAGGGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 90 bp | TGCTGCGTTCCTCGTAAGGGGAGTGAGTTGTCCTCCCACGGTCACTaGAGAGGCTCCTCCGCTTGCGTCTCTCTTCCCAGGGCTTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CCVPRKGSELSSHGH*RGSSACVSLPRAWL Trigger: TAGCCAAGCCCTGGGAAGAGAGACGCAAGCGGAGGAGCCTCTCCAGTGACCGTGGGAGGACAACTCACTCCCCTTACGAGGAACGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | CTGCCAGGAGCTCCTGGGAGCACGCAGTCCTCCCAAGGTAGAGATGAGCACATATTAGGGCTCCCCTGCTaGATTCGCCGGGTGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPGAPGSTQSSQGRDEHILGLPC*IRRVTS Trigger: CGAGGTCACCCGGCGAATCAAGCAGGGGAGCCCTAA...TATGTGCTCATCTCTACCTTGGGAGGACTGCGTGCTCCCAGGAGCTCCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | TCACCCCTGCAGCCTGCTTCTGTTTCAAGTAGGAGACTAGGTTCCTaGGAAGCCGCCTCTGTAGGCCTGGCTCCACCACGGGCATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLQPASVSSRRLGS*EAASVGLAPPRACP Trigger: AGGGCATGCCCGTGGTGGAGCCAGGCCTACAGAGGCGGCTTCTCAGGAACCTAGTCTCCTACTTGAAACAGAAGCAGGCTGCAGGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 90 bp | AGTTGCTGCCTGACTCCTTGGTCCCTTCACTGGAGTGGTTCTCCTTaGGGCTACGCTCAGGGGTGCGATCTGAGCCTCGCTCAGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCCLTPWSLHWSGSP*GYAQGCDLSLAQTA Trigger: AGCAGTCTGAGCGAGGCTCAGATCGCACCCCTGAGCGTAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | CAGGGAAAAACAACAAAACTACCTGTAGCTGTTGGCACAGGTCTTAGGCCCAGGCGCTCCCGCGGCCGCTaGGCGGACGATGACGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGKTTKLPVAVGTGLRPRRSRGR*ADDDEP Trigger: TGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGCG...CCTGGGCCTAAGACCTGTGCCAACAGCTACAGGTAGTTTTGTTGTTTTTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | CCTCTCCTCAGCACCATGTCTGCTGTTGCTGAGGGAGTTGCTGCCTaGCTCCTTGGTCCCTTCACTGGAGTGGTTCTCCTTGCGGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSTMSAVAEGVAA*LLGPFTGVVLLAAT Trigger: CGTAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAACTCCCTCAGCAACAGCAGACATGGTGCTGAGGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | CCCTTAGGAATGTGCCTCATGAGGCTAGGAGAAAACATCCACCTTCCATGTTCTGCCGGGACCGGGTGCTaGGTACCGCCGGAGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLGMCLMRLGENIHLPCSAGTGC*VPPEAL Trigger: CAAGGCCTCCGGCGGTACCAAGCACCCGGTCCCGGC...AGAACATGGAAGGTGGATGTTTTCTCCTAGCCTCATGAGGCACATTCCTAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGCCAAAGGGTGCCCTTTTCCAAAGGGGTAATAAAGTGACCTGGTTCTGCCCGCGGGCAGGCCTCTaGATGACCACCTCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PEPKGALFQRGNKVTWFCPRAGL*MTTSSM Trigger: CATCGAGGAGGTGGTCATCAAGAGGCCTGCCCGCGG...GCAGAACCAGGTCACTTTATTACCCCTTTGGAAAAGGGCACCCTTTGGCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGCATGAACTCCATACAGCCTTCAAGGTCCATCTCAGAGCCCAGGGGTCACCGAGTCTCCTCGGCTTaGGCAAAATCCACCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGMNSIQPSRSISEPRGHRVSSA*AKSTRS Trigger: GCTCCGGGTGGATTTTGCCAAAGCCGAGGAGACTCG...GTGACCCCTGGGCTCTGAGATGGACCTTGAAGGCTGTATGGAGTTCATGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | CCCGTCGAAGCTCCACCTCAGAAACACTGTGGTCCAGGTTGCCGATaGAGAGGTTTCGAGTGGCTCTCTGATCATCCTCCGGCATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVEAPPQKHCGPGCR*RGFEWLSDHPPASG Trigger: ACCTGATGCCGGAGGATGATCAGAGAGCCACTCGAAACCTCTTCATCGGCAACCTGGACCACAGTGTTTCTGAGGTGGAGCTTCGACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 90 bp | CTGCGTCCAGGCTCTCGTACTGGATGTAGGCAAAGCTGTCTCCTTTaGCGTGATCGATGGTCCGAATGCTCCCGAAGCGATCGAATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRPGSRTGCRQSCLL*RDRWSECSRSDRIP Trigger: GGGAATTCGATCGCTTCGGGAGCATTCGGACCATCGATCACGTCAAAGGAGACAGCTTTGCCTACATCCAGTACGAGAGCCTGGACGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 90 bp | GTTTCTGCCAATCACCCGGCCAGACATAGCCACCTTCGCCCTGTGTaGCATGTCCAGATTCTGAAACTTGAGGAAGGCATAGGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VSANHPARHSHLRPV*HVQILKLEEGIGTT Trigger: GGTGGTGCCTATGCCTTCCTCAAGTTTCAGAATCTGGACATGGCACACAGGGCGAAGGTGGCTATGTCTGGCCGGGTGATTGGCAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTTGATGCAACATCTCAGGCACTGGGTACCTGCTGTCAGCTTTCTCACCTGATGAGGAGCGTCTaGTACTCCGGAGCCGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCLDATSQALGTCCQLSHLMRSV*YSGAAV Trigger: CACCGCGGCTCCGGAGTACAAGACGCTCCTCATCAG...GTGAGAAAGCTGACAGCAGGTACCCAGTGCCTGAGATGTTGCATCAAGGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | ATCTTACCTCCAAGACCCCTGGCAGTCAGGCAGATGACTGATAGGGGAGACCCTTTTAGCTGGGTCAGCTaGCTGCCAGAAGGATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILPPRPLAVRQMTDRGDPFSWVS*LPEGWS Trigger: AGACCATCCTTCTGGCAGCAAGCTGACCCAGCTAAA...AGGGTCTCCCCTATCAGTCATCTGCCTGACTGCCAGGGGTCTTGGAGGTAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | GTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCGAGTCTCCTCGGCTTaGGCAAAATCCACCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHRCRKAAVFQHQKPIPTRVSSA*AKSTRS Trigger: GCTCCGGGTGGATTTTGCCAAAGCCGAGGAGACTCG...GGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAAAACATCCACCTTCCATGTTCTTCCTAGGGTTCACAACCCGAGTCACTCGTAAGGGGAGTGAGTaGTCCTCCCACGGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRKHPPSMFFLGFTTRVTRKGSE*SSHGHW Trigger: CCAGTGACCGTGGGAGGACAACTCACTCCCCTTACG...AGTGACTCGGGTTGTGAACCCTAGGAAGAACATGGAAGGTGGATGTTTTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS CCA 90 bp | TTGCTGCCAGAAGGATGGTCTTTGAGGAGGCCACTGATAACTCCCTaGTCCCCCTCAAGGATGTGCATAGATGTCGGAAAGCAGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPEGWSLRRPLITP*SPSRMCIDVGKQLF Trigger: AAACAGCTGCTTTCCGACATCTATGCACATCCTTGAGGGGGACCAGGGAGTTATCAGTGGCCTCCTCAAAGACCATCCTTCTGGCAGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | AGATGGCCCAAGGAAGAAGGTTACAGTGGGTGTGGTTCTTCACTAAGAAACAGAATCTCCCCGAACCGCTaGAACTGGTGGAAGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPKEEGYSGCGSSLRNRISPNR*NWWKSR Trigger: CCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGAT...TCTGTTTCTTAGTGAAGAACCACACCCACTGTAACCTTCTTCCTTGGGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCTAAAACTGACAAAGCATCAGGGGCTCATGCTTTGCTCAGCCTGCCTCACACTGTGGTCCAGGTaGCCGATGAAGAGGTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QGLKLTKHQGLMLCSACLTLWSR*PMKRFR Trigger: TCGAAACCTCTTCATCGGCAACCTGGACCACAGTGT...GAGGCAGGCTGAGCAAAGCATGAGCCCCTGATGCTTTGTCAGTTTTAGACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTTACAGGGACCCAGCTGTGCTACAACAACTCTTCTGTGATGCTTTTCATTGAGAGGCTCCTCCGCTaGCGTCTCTCTTCCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FVTGTQLCYNNSSVMLFIERLLR*RLSSQG Trigger: GCCCTGGGAAGAGAGACGCAAGCGGAGGAGCCTCTC...AATGAAAAGCATCACAGAAGAGTTGTTGTAGCACAGCTGGGTCCCTGTAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | ACTTTGAGGCTTGGTCAGGCTGGATTTGGAGAAAAACTGGCAAGGTCTAAAACTCTGGAGTGGTTCTCCTaGCGGCTACGCTCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLRLGQAGFGEKLARSKTLEWFS*RLRSGV Trigger: CACCCCTGAGCGTAGCCGCAAGGAGAACCACTCCAG...AGTTTTAGACCTTGCCAGTTTTTCTCCAAATCCAGCCTGACCAAGCCTCAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAGGATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCTGTTGCTGAGGGAGTaGCTGCCTGACTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSRMCIDVGKQLFFNTRSLLLRE*LPDSLV Trigger: GACCAAGGAGTCAGGCAGCAACTCCCTCAGCAACAG...GCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATCCTTGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTGCCGAATGGGTTGTGACCCACAGGTGGAGAGCCACTGCTTTAGAGCCTTTTTGGTCTCGTGTTTaGGCTCTTCAAGAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KFAEWVVTHRWRATALEPFWSRV*ALQESW Trigger: CCAAGACTCTTGAAGAGCCAAAACACGAGACCAAAA...AGGCTCTAAAGCAGTGGCTCTCCACCTGTGGGTCACAACCCATTCGGCAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | CATCACAGCTACAGAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATGTTCTTCCTCTAACTaGCCCAATGTCCGCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHSYRNPTPFAERRVYWLCSSSN*PNVRSA Trigger: AGCGCTGCGGACATTGGGCAAGTTAGAGGAAGAACA...TAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTCTGTAGCTGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS TCA 90 bp | TGTTTTGGCTCTTCAAGAGTCTTGGGCTCTGCCTCAGTGGTCCGATaGTTGCGTTCACTCTCTCTAGTCTTTTTCCCATGGGAAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CFGSSRVLGSASVVR*LRSLSLVFFPWEES Trigger: AGACTCTTCCCATGGGAAAAAGACTAGAGAGAGTGAACGCAATCATCGGACCACTGAGGCAGAGCCCAAGACTCTTGAAGAGCCAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055843.9 ENSMUST00000185707.2 |
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| CDS-3UTR CAA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGTTGCTGCCTGACTCCTaGGTCCCTTCACTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETLLPLLREGCTGYKVNKLLPDS*VPSLEW Trigger: CCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAA...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS-3UTR CAA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGCTGTTGCTGAGGGAGTaGCTGCCTGACTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ETLLPLLREGCTGYKVNKLLLRE*LPDSLV Trigger: GACCAAGGAGTCAGGCAGCAACTCCCTCAGCAACAG...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCATGCTTTGCTCAGCCTGCCTCTCTCCTTCCCAAATAAATACAAAGTTCCAGAAGGATGGTCTTaGAGGAGGCCACTGATAACT | + |
|
Preference number: 5 (lower is better) Translates to: GAHALLSLPLSFPNKYKVPEGWS*RRPLIT Trigger: AGTTATCAGTGGCCTCCTCAAAGACCATCCTTCTGG...AACTTTGTATTTATTTGGGAAGGAGAGAGGCAGGCTGAGCAAAGCATGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 90 bp | GGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTaGAGTGTCTGGGCATATTCTGACAGAGTCTTTAGCTTTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKQLFFNTRSPFQPS*SVWAYSDRVFSFLV Trigger: GACCAAAAAGCTAAAGACTCTGTCAGAATATGCCCAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS CCA 90 bp | CTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTaGGCATATTCTGACAGAGTCTTTAGCTTTTTGGTCTCGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFFNTRSPFQPSCSV*AYSDRVFSFLVSCF Trigger: AAAACACGAGACCAAAAAGCTAAAGACTCTGTCAGAATATGCCCAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS-3UTR CAA 90 bp | GATGTGCATAGATGTCGGAAAGCAGCTGTTTTTCAACACCAGAAGCCCATTCCATTTTGGTCTCGTGTTTaGGCTCTTCAAGAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DVHRCRKAAVFQHQKPIPFWSRV*ALQESW Trigger: CCAAGACTCTTGAAGAGCCAAAACACGAGACCAAAA...TGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185707.2 |
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| CDS-3UTR CAA 90 bp | GAAACCCTACTCCCTTTGCTGAGAGAAGGGTGTACTGGTTATAAAGTAAACAAGAGAGTCTTTAGCTTTTaGGTCTCGTGTTTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETLLPLLREGCTGYKVNKRVFSF*VSCFGS Trigger: AGAGCCAAAACACGAGACCAAAAAGCTAAAGACTCT...CTTGTTTACTTTATAACCAGTACACCCTTCTCTCAGCAAAGGGAGTAGGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 72 bp | CCGCGGGGCTTGTCGCGAGCCCGCGCCGGGACCGGGTaGTTGGTACCGCCGGAGGCCTTGTGCGCTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PRGLSRARAGTG*LVPPEALCAAR Trigger: GCGGGCAGCGCACAAGGCCTCCGGCGGTACCAAGCACCCGGTCCCGGCGCGGGCTCGCGACAAGCCCCGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | GGGGCTTGTCGCGAGCCCGCGCCGGGACCGGGTGCTTaGTACCGCCGGAGGCCTTGTGCGCTGCCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GACREPAPGPGA*YRRRPCALPAA Trigger: GGCGGCGGGCAGCGCACAAGGCCTCCGGCGGTACCAAGCACCCGGTCCCGGCGCGGGCTCGCGACAAGCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | CGGGGCTTGTCGCGAGCCCGCGCCGGGACCGGGTGCTaGGTACCGCCGGAGGCCTTGTGCGCTGCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLSRARAGTGC*VPPEALCAARR Trigger: GCGGCGGGCAGCGCACAAGGCCTCCGGCGGTACCAAGCACCCGGTCCCGGCGCGGGCTCGCGACAAGCCCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | CCGCCTCTGCCTCTCGTTCGCGCTCCCGCGGCCGCTTaGCGGACGATGACGAGCCACGCCCGCTCGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPLPLVRAPAAA*RTMTSHARSGW Trigger: CCAGCCCGAGCGGGCGTGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGCGCGAACGAGAGGCAGAGGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | CCCGCCTCTGCCTCTCGTTCGCGCTCCCGCGGCCGCTaGGCGGACGATGACGAGCCACGCCCGCTCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PASASRSRSRGR*ADDDEPRPLGL Trigger: CAGCCCGAGCGGGCGTGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGCGCGAACGAGAGGCAGAGGCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 72 bp | CTCTCGTTCGCGCTCCCGCGGCCGCTTGGCGGACGATaGCGAGCCACGCCCGCTCGGGCTGGAGTCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSFALPRPLGGR*RATPARAGVSL Trigger: GAGCGAGACTCCAGCCCGAGCGGGCGTGGCTCGTCATCGTCCGCCAAGCGGCCGCGGGAGCGCGAACGAGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 90 bp | AGCTCCGGGGTGTGTGACAGGCGCAGGCTGATCTCCCCGAACCGCTaGAACTGGTGGAAGAGCCGGTCCTCCAAGTGCTCGGCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGVCDRRRLISPNR*NWWKSRSSKCSAGS Trigger: GCTGCCGGCCGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTCACACACCCCGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 72 bp | GTTCACGTAGGCCACGCGGCCCAGCTCCGGGGTGTGTaGCAGGCGCAGGCTGATCTCCCCGAACCGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VHVGHAAQLRGV*QAQADLPEPLE Trigger: TTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTCACACACCCCGGAGCTGGGCCGCGTGGCCTACGTGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 72 bp | AACCGCTTGAACTGGTGGAAGAGCCGGTCCTCCAAGTaGTCGGCCGGCAGCGCGGGGCTCAGGCTGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: NRLNWWKSRSSK*SAGSAGLRLLM Trigger: CATCAGCAGCCTGAGCCCCGCGCTGCCGGCCGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | AGGCGCAGGCTGATCTCCCCGAACCGCTTGAACTGGTaGAAGAGCCGGTCCTCCAAGTGCTCGGCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRLISPNRLNW*KSRSSKCSAGS Trigger: GCTGCCGGCCGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | GACAGGCGCAGGCTGATCTCCCCGAACCGCTTGAACTaGTGGAAGAGCCGGTCCTCCAAGTGCTCGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: DRRRLISPNRLN*WKSRSSKCSAG Trigger: GCCGGCCGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | GTTGTCCTCCCACGGTCACTGGAGAGGCTCCTCCGCTaGCGTCTCTCTTCCCAGGGCTTGGCTATGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVLPRSLERLLR*RLSSQGLAMLR Trigger: CCGGAGCATAGCCAAGCCCTGGGAAGAGAGACGCAAGCGGAGGAGCCTCTCCAGTGACCGTGGGAGGACAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | CCTCGTAAGGGGAGTGAGTTGTCCTCCCACGGTCACTaGAGAGGCTCCTCCGCTTGCGTCTCTCTTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRKGSELSSHGH*RGSSACVSLPR Trigger: CCTGGGAAGAGAGACGCAAGCGGAGGAGCCTCTCCAGTGACCGTGGGAGGACAACTCACTCCCCTTACGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | GTGTGTGACAGGCGCAGGCTGATCTCCCCGAACCGCTaGAACTGGTGGAAGAGCCGGTCCTCCAAGTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VCDRRRLISPNR*NWWKSRSSKCS Trigger: CGAGCACTTGGAGGACCGGCTCTTCCACCAGTTCAAGCGGTTCGGGGAGATCAGCCTGCGCCTGTCACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | CCTTGGTCCTGCTGCGTTCCTCGTAAGGGGAGTGAGTaGTCCTCCCACGGTCACTGGAGAGGCTCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWSCCVPRKGSE*SSHGHWRGSSA Trigger: AGCGGAGGAGCCTCTCCAGTGACCGTGGGAGGACAACTCACTCCCCTTACGAGGAACGCAGCAGGACCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | CCTGACTCCTTGGTCCCTTCACTGGAGTGGTTCTCCTaGCGGCTACGCTCAGGGGTGCGATCTGAGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PDSLVPSLEWFS*RLRSGVRSEPR Trigger: GCGAGGCTCAGATCGCACCCCTGAGCGTAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 90 bp | GAGTTGCTGCCTGACTCCTTGGTCCCTTCACTGGAGTGGTTCTCCTaGCGGCTACGCTCAGGGGTGCGATCTGAGCCTCGCTCAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELLPDSLVPSLEWFS*RLRSGVRSEPRSDC Trigger: GCAGTCTGAGCGAGGCTCAGATCGCACCCCTGAGCGTAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS TCA 72 bp | CCTTCGCCCTGTGTGCCATGTCCAGATTCTGAAACTTaGGGAAGGCATAGGCACCACCCTGGCCGCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSPCVPCPDSET*GRHRHHPGRGQ Trigger: CTGCCCGCGGCCAGGGTGGTGCCTATGCCTTCCTCAAGTTTCAGAATCTGGACATGGCACACAGGGCGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS GCA 72 bp | CTGACTCCTTGGTCCCTTCACTGGAGTGGTTCTCCTTaGGGCTACGCTCAGGGGTGCGATCTGAGCCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTPWSLHWSGSP*GYAQGCDLSLA Trigger: AGCGAGGCTCAGATCGCACCCCTGAGCGTAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS CCA 72 bp | GCTGGTACTGCTGGGGATAGCGAGTCTCCTCGGCTTTaGCAAAATCCACCCGGAGCCTGCGATCTGGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGTAGDSESPRL*QNPPGACDLDH Trigger: GTGGTCCAGATCGCAGGCTCCGGGTGGATTTTGCCAAAGCCGAGGAGACTCGCTATCCCCAGCAGTACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055843.9 ENSMUST00000185707.2 |
||
| CDS CAA 90 bp | TCAGCACCATGTCTGCTGTTGCTGAGGGAGTTGCTGCCTGACTCCTaGGTCCCTTCACTGGAGTGGTTCTCCTTGCGGCTACGCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAPCLLLLRELLPDS*VPSLEWFSLRLRSG Trigger: CCCTGAGCGTAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAACTCCCTCAGCAACAGCAGACATGGTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS TCA 72 bp | TCCAGGTTGCCGATGAAGAGGTTTCGAGTGGCTCTCTaGTCATCCTCCGGCATCAGGTCCTCCTCGCACACG | + |
|
Preference number: 6 (lower is better) Translates to: SRLPMKRFRVAL*SSSGIRSSSHT Trigger: CGTGTGCGAGGAGGACCTGATGCCGGAGGATGATCAGAGAGCCACTCGAAACCTCTTCATCGGCAACCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS TCA 72 bp | CAGCCTGCTTCTGTTTCAAGTAGGAGACTAGGTTCCTaGGAAGCCGCCTCTGTAGGCCTGGCTCCACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: QPASVSSRRLGS*EAASVGLAPPR Trigger: CCGTGGTGGAGCCAGGCCTACAGAGGCGGCTTCTCAGGAACCTAGTCTCCTACTTGAAACAGAAGCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
||
| CDS TCA 72 bp | CAGCATCCAAGTTCCGATGCCGGGTATATCCGTCAGTaGGCAGCTCATAGTGCACAGGGAGAGGTGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QHPSSDAGYIRQ*AAHSAQGEVRA Trigger: AGCCCTCACCTCTCCCTGTGCACTATGAGCTGCTCACTGACGGATATACCCGGCATCGGAACTTGGATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055843.9 ENSMUST00000185707.2 |
||
| CDS CCA 72 bp | TCTTCCTCTAACTTGCCCAATGTCCGCAGCGCTGACTaGAGGTACTGCTGTGAAAAGTCGCAGGGCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSNLPNVRSAD*RYCCEKSQGGK Trigger: CTTCCCGCCCTGCGACTTTTCACAGCAGTACCTCCAGTCAGCGCTGCGGACATTGGGCAAGTTAGAGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | TGTCTGCTGTTGCTGAGGGAGTTGCTGCCTGACTCCTaGGTCCCTTCACTGGAGTGGTTCTCCTTGCGGCTA | + |
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Preference number: 6 (lower is better) Translates to: CLLLLRELLPDS*VPSLEWFSLRL Trigger: TAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAACTCCCTCAGCAACAGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 72 bp | AGTCGAAGGCGCTGGGCAATCTTTAGCTGGGTCAGCTaGCTGCCAGAAGGATGGTCTTTGAGGAGGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SRRRWAIFSWVS*LPEGWSLRRPL Trigger: CAGTGGCCTCCTCAAAGACCATCCTTCTGGCAGCAAGCTGACCCAGCTAAAGATTGCCCAGCGCCTTCGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 72 bp | GCTCCACCTCAGAAACACTGTGGTCCAGGTTGCCGATaGAGAGGTTTCGAGTGGCTCTCTGATCATCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: APPQKHCGPGCR*RGFEWLSDHPP Trigger: CGGAGGATGATCAGAGAGCCACTCGAAACCTCTTCATCGGCAACCTGGACCACAGTGTTTCTGAGGTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 72 bp | AGCACCATGTCTGCTGTTGCTGAGGGAGTTGCTGCCTaGCTCCTTGGTCCCTTCACTGGAGTGGTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: STMSAVAEGVAA*LLGPFTGVVLL Trigger: AAGGAGAACCACTCCAGTGAAGGGACCAAGGAGTCAGGCAGCAACTCCCTCAGCAACAGCAGACATGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS TCA 72 bp | GGCTCTCGTACTGGATGTAGGCAAAGCTGTCTCCTTTaGCGTGATCGATGGTCCGAATGCTCCCGAAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: GSRTGCRQSCLL*RDRWSECSRSD Trigger: ATCGCTTCGGGAGCATTCGGACCATCGATCACGTCAAAGGAGACAGCTTTGCCTACATCCAGTACGAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | GCAATCTTTAGCTGGGTCAGCTTGCTGCCAGAAGGATaGTCTTTGAGGAGGCCACTGATAACTCCCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AIFSWVSLLPEG*SLRRPLITPWS Trigger: GGACCAGGGAGTTATCAGTGGCCTCCTCAAAGACCATCCTTCTGGCAGCAAGCTGACCCAGCTAAAGATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | GAAGGATGGTCTTTGAGGAGGCCACTGATAACTCCCTaGTCCCCCTCAAGGATGTGCATAGATGTCGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: EGWSLRRPLITP*SPSRMCIDVGK Trigger: CTTTCCGACATCTATGCACATCCTTGAGGGGGACCAGGGAGTTATCAGTGGCCTCCTCAAAGACCATCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 72 bp | AGGCCACTGATAACTCCCTGGTCCCCCTCAAGGATGTaGATAGATGTCGGAAAGCAGCTGTTTTTCAACACC | + |
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Preference number: 6 (lower is better) Translates to: RPLITPWSPSRM*IDVGKQLFFNT Trigger: GGTGTTGAAAAACAGCTGCTTTCCGACATCTATGCACATCCTTGAGGGGGACCAGGGAGTTATCAGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | GCTTTTTGGTCTCGTGTTTTGGCTCTTCAAGAGTCTTaGGCTCTGCCTCAGTGGTCCGATGATTGCGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: AFWSRVLALQES*ALPQWSDDCVH Trigger: GTGAACGCAATCATCGGACCACTGAGGCAGAGCCCAAGACTCTTGAAGAGCCAAAACACGAGACCAAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055843.9 ENSMUST00000185707.2 |
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| CDS CAA 90 bp | CCCAGCTGCAGTGTCTGGGCATATTCTGACAGAGTCTTTAGCTTTTaGGTCTCGTGTTTTGGCTCTTCAAGAGTCTTGGGCTCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSCSVWAYSDRVFSF*VSCFGSSRVLGSAS Trigger: TGAGGCAGAGCCCAAGACTCTTGAAGAGCCAAAACACGAGACCAAAAAGCTAAAGACTCTGTCAGAATATGCCCAGACACTGCAGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS GCA 72 bp | CTGTTTTTCAACACCAGAAGCCCATTCCAACCCAGCTaGAGTGTCTGGGCATATTCTGACAGAGTCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LFFNTRSPFQPS*SVWAYSDRVFS Trigger: GCTAAAGACTCTGTCAGAATATGCCCAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CCA 72 bp | AACACCAGAAGCCCATTCCAACCCAGCTGCAGTGTCTaGGCATATTCTGACAGAGTCTTTAGCTTTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: NTRSPFQPSCSV*AYSDRVFSFLV Trigger: GACCAAAAAGCTAAAGACTCTGTCAGAATATGCCCAGACACTGCAGCTGGGTTGGAATGGGCTTCTGGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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| CDS CAA 90 bp | TCTGGGCATATTCTGACAGAGTCTTTAGCTTTTTGGTCTCGTGTTTaGGCTCTTCAAGAGTCTTGGGCTCTGCCTCAGTGGTCCGATGAT | + |
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Preference number: 6 (lower is better) Translates to: SGHILTESLAFWSRV*ALQESWALPQWSDD Trigger: ATCATCGGACCACTGAGGCAGAGCCCAAGACTCTTGAAGAGCCAAAACACGAGACCAAAAAGCTAAAGACTCTGTCAGAATATGCCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055843.9 |
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