Pregenerated sensors for RBM15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048109Ensembl transcript IDs: ENSMUST00000061772.11
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACTCGTGCACTGTGTTGAGGCTTAGAGTGCTTGCCCCGGCTTCTTaGATGCCAGCAAACAGCACCCTCATCGTGTTGAGGACCGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: DSCTVLRLRVLAPAS*MPANSTLIVLRTEK Trigger: CTTCTCGGTCCTCAACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCTCAACACAGTGCACGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR TCA 90 bp | TTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTTaGGGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LPRLLACQQTAPSSC*GPRSKGSPSLQTKG Trigger: CCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCCTCAACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR GCA 90 bp | ATTTCAGGAACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTaGACTGTGTTGAGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATG | + |
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Preference number: 1 (lower is better) Translates to: ISGTPALQTSKAPDS*TVLRLRVLAPASCM Trigger: CATGCAAGAAGCCGGGGCAAGCACTCTAAGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTTCCTGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR CAA 90 bp | ACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTaGAGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TPALQTSKAPDSCTV*RLRVLAPASCMPAN Trigger: GTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR CAA 90 bp | CTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTaGAGGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAPASCMPANSTLIV*RTEKQRIPFTANKG Trigger: CCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCCTCAACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR TCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGGAGCCCATGTTTGAGTaGCAGCTACTTTTAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GLECLPRLLACQQTAPSSEPMFE*QLLLSC Trigger: ACAGCTTAAAAGTAGCTGTCACTCAAACATGGGCTC...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCAAAGGGGTCAAGGTTTaGCGTCAATTCACTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RLRVLAPASCMPANSTLIKGVKV*RQFTSR Trigger: CCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTT...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTAAGACATACAAAATCTaGGCAGCAGCAAGTACCCCC | + |
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Preference number: 2 (lower is better) Translates to: LECLPRLLACQQTAPSSCKTYKI*AAASTP Trigger: GGGGGTACTTGCTGCTGCTCAGATTTTGTATGTCTT...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCATGATCCTTCAGAATTaGCACACCGTGATAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RLRVLAPASCMPANSTLIMILQN*HTVIVK Trigger: TTTGACTATCACGGTGTGTCAATTCTGAAGGATCAT...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGGTCACTGTAACACTATaGTCCTTCAGAATTGACACA | + |
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Preference number: 2 (lower is better) Translates to: LRVLAPASCMPANSTLIVVTVTL*SFRIDT Trigger: TGTGTCAATTCTGAAGGATCATAGTGTTACAGTGAC...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR GCA 90 bp | ACATTTAAAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTTGGTGCAAATAAAGCCCCCGACTCGTaGACTGTGTTGAGGCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: TFKRQPEHFSFFWQFGANKAPDS*TVLRLR Trigger: TCTAAGCCTCAACACAGTGCACGAGTCGGGGGCTTT...ATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTTTAAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR GCA 72 bp | ACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTaGACTGTGTTGAGGCTTAGAGTGCTTGCCCCGGCT | + |
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Preference number: 3 (lower is better) Translates to: TPALQTSKAPDS*TVLRLRVLAPA Trigger: AGCCGGGGCAAGCACTCTAAGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR CAA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTAGCACCCTCATCGTGTaGAGGACCGAGAAGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: NSGSSNQQSPRLVHCVEASTLIV*RTEKQR Trigger: CCTTTGCTTCTCGGTCCTCAACACGATGAGGGTGCT...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR TCA 72 bp | CTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTTaGGGACCGAGAAGCAAAGGATCCCCTTCACTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LLACQQTAPSSC*GPRSKGSPSLQ Trigger: TTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCCTCAACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR-3UTR CAA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTTATGATCCTTCAGAATaGACACACCGTGATAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: NSGSSNQQSPRLVHCVEAYDPSE*THRDSQ Trigger: TTGACTATCACGGTGTGTCAATTCTGAAGGATCATA...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR TCA 72 bp | AAAGGGGGTCACTGTAACACTATGATCCTTCAGAATTaGCACACCGTGATAGTCAAAAGGAAACTGATGATC | + |
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Preference number: 3 (lower is better) Translates to: KGGHCNTMILQN*HTVIVKRKLMI Trigger: GATCATCAGTTTCCTTTTGACTATCACGGTGTGTCAATTCTGAAGGATCATAGTGTTACAGTGACCCCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGGGGGAAAGCGACCTCTaGCCTCCCCCTCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSGESDL*PPPPPG Trigger: CCCTGGAGGAGGGGGAGGTCAGAGGTCGCTTTCCCC...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCGCTGCTGCTCCCATTaGTGCCGCCGGAGCCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSRCCSH*CRRSPL Trigger: TAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCTAACGGGGAGCGGCTaGGGCGCCGGCTCACGTACA | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSLTGSG*GAGSRT Trigger: TGTACGTGAGCCGGCGCCGCAGCCGCTCCCCGTTAG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCGCACGCCGCCATCTTaGACTCCGCCGCGGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSRTPPS*TPPRQR Trigger: CCTTTGCCGCGGCGGAGTCCAAGATGGCGGCGTGCG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCTGGACTTGTCCAGATaGAGGCTCCGCCGCGACCCG | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSLDLSR*RLRRDP Trigger: CGGGTCGCGGCGGAGCCTTCATCTGGACAAGTCCAG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCTCCCACAGGGAGGCTaGTCACCCCAGCTGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSLPQGG*SPQLPA Trigger: AGCAGGCAGCTGGGGTGATCAGCCTCCCTGTGGGAG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTCCGTCTTCCCGCTGCTaGTCCCATTGCTGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: NSGSSNQQSPRLVHCVEAPSSRC*SHCCRR Trigger: CCGGCGGCAGCAATGGGAGCAGCAGCGGGAAGACGG...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTAGGCGGCCTCTGGCATaGTTGGCCGCCCTCGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LECLPRLLACQQTAPSSCRRPLA*LAALAS Trigger: GGACGCGAGGGCGGCCAAGCATGCCAGAGGCCGCCT...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGGCCTCTGGCATGCTTaGCCGCCCTCGCGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIGLWHA*PPSRPL Trigger: CAGAGGACGCGAGGGCGGCCAAGCATGCCAGAGGCC...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTTCTCGTACTCGCGGCTaGCGCCCCGGCTGCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: LECLPRLLACQQTAPSSCSRTRG*RPGCWT Trigger: AGTCCAGCAGCCGGGGCGGCAGCCGCGAGTACGAGA...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTAGCGGCTACTGGAGCTaGCCCCGCCGGTCTCGTACT | + |
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Preference number: 4 (lower is better) Translates to: NSGSSNQQSPRLVHCVEASGYWS*PRRSRT Trigger: AGTACGAGACCGGCGGGGGCAGCTCCAGTAGCCGCT...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGGCGTTCTCGAACCGGTaGTGGGGGTGGCACCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LRVLAPASCMPANSTLIVAFSNR*WGWHPV Trigger: GACTGGGTGCCACCCCCACCACCGGTTCGAGAACGC...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCCCCGCTCATCCCCGCTaGCAGAACCTGAGAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIPAHPR*QNLRGD Trigger: GTCACCTCTCAGGTTCTGGCAGCGGGGATGAGCGGG...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTTGTGCAAGCGGCTACTaGAGCTGCCCCCGCCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LECLPRLLACQQTAPSSCCASGY*SCPRRS Trigger: AGACCGGCGGGGGCAGCTCCAGTAGCCGCTTGCACA...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACAGGGAGCGCTTGGGCTTaGCCGGCGAGCGCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTGSAWA*PASAPF Trigger: GAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCC...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTCTGTCCCTGTCCAGTaGCCAGCCATCCCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LRVLAPASCMPANSTLIVSVPVQ*PAIPPS Trigger: CGAAGGAGGGATGGCTGGTCACTGGACAGGGACAGA...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTTGTCCGTCTTCCCGCTaGTGCTCCCATTGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LECLPRLLACQQTAPSSCCPSSR*CSHCCR Trigger: GCGGCAGCAATGGGAGCAGCAGCGGGAAGACGGACA...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTTCCTTGGCTGGTCCCTaGTGCTGGGCAAGTCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: NSGSSNQQSPRLVHCVEASLAGP*CWASPD Trigger: ATCGGGACTTGCCCAGCAGCAGGGACCAGCCAAGGA...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCCGCCCTCGCGTCCTCTaGCCTCCGGAAGTTCACAAA | + |
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Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIRPRVL*PPEVHK Trigger: TTTGTGAACTTCCGGAGGCCAGAGGACGCGAGGGCG...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAGCACCAGGCGGCCTCTaGCATGCTTGGCCGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKAPGGL*HAWPPS Trigger: CGAGGGCGGCCAAGCATGCCAGAGGCCGCCTGGTGC...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGCCTGAGGCGACGATCTaGGCCACCAAGTGGGAATCC | + |
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Preference number: 4 (lower is better) Translates to: LRVLAPASCMPANSTLIVPEATI*ATKWES Trigger: GGATTCCCACTTGGTGGCCCAGATCGTCGCCTCAGG...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTTCCTAAGTGGCCTCTaGGTAGAGGCGGCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSFLSGL*VEAAVS Trigger: AGACACTGCCGCCTCTACTCAGAGGCCACTTAGGAA...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCAGCCCCCTAACTTCTTaGTCCGCTCCCCACGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLISPLTS*SAPHEN Trigger: GTTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCT...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTCTTTCCTTTCATTGTTaGGGGTCGCCGGAGGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: NSGSSNQQSPRLVHCVEALSFHC*GSPEVV Trigger: GACGACCTCCGGCGACCCTCAACAATGAAAGGAAAG...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACACGACTCGCCCCCGCCTaGGGAATTTTTGGTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTRLAPA*GIFGAR Trigger: CCGAGCACCAAAAATTCCTCAGGCGGGGGCGAGTCG...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGAAAGCCATAGGTACTaGTCTGGCCTCGAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIESHRY*SGLEKA Trigger: GGCCTTCTCGAGGCCAGACCAGTACCTATGGCTTTC...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR CAA 72 bp | CTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTaGAGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LQTSKAPDSCTV*RLRVLAPASCM Trigger: CATGCAAGAAGCCGGGGCAAGCACTCTAAGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCCTATCCCGTTCAGCTaGTGCAGAGTTTTTACGGTC | + |
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Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSPIPFS*CRVFTV Trigger: GACCGTAAAAACTCTGCATCAGCTGAACGGGATAGG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAGGCTGCCGCCCCGGCTaGTGGACTTGTCCAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKGCRPG*WTCPDE Trigger: TTCATCTGGACAAGTCCAGCAGCCGGGGCGGCAGCC...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCAGAAAAGTGTCCGGTTaGCACGCTGATCGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIRKVSG*HADRPQ Trigger: CTGAGGACGATCAGCGTGCCAACCGGACACTTTTCT...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACACTTCGCTTCCTTGGCTaGTCCCTGCTGCTGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTLRFLG*SLLLGK Trigger: CTTGCCCAGCAGCAGGGACCAGCCAAGGAAGCGAAG...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCCTGATCGTCCTCAGGTaGTATCTCATCCACTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLILIVLR*YLIHFS Trigger: CGAGAAGTGGATGAGATATCACCTGAGGACGATCAG...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGGGAAGGTGGCTTCTaGTTTGATGAAGAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLECLPRLLACQQTAPSSWEGGF*FDEEVL Trigger: CAGCACTTCTTCATCAAAGCAGAAGCCACCTTCCCA...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR CAA 72 bp | GCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTaGAGGACCGAGAAGCAAAGGATCCCCTTCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASCMPANSTLIV*RTEKQRIPFTA Trigger: TGCAGTGAAGGGGATCCTTTGCTTCTCGGTCCTCAACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACAAAGCGTTTGAACTCGTaGAACAGCCCGTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTKRLNS*NSPSST Trigger: GGTGGAGGACGGGCTGTTTCACGAGTTCAAACGCTT...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACACCCGCTGCCAGAACCTaGGAGGTGACTGATTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTPAART*EVTDFD Trigger: GTCAAAATCAGTCACCTCTCAGGTTCTGGCAGCGGG...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAGGAGAAGGAGTGCAGTaGCGCTGTTTTCGAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKGEGVQ*RCFRGR Trigger: ACGGCCTCGAAAACAGCGTCACTGCACTCCTTCTCC...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGGTGATCTATCAAGATaGCGTCCTCCACTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIGDLSR*RPPLSS Trigger: TGAGGAAAGTGGAGGACGGCATCTTGATAGATCACC...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACAAGTGCTGGCACTGGGTaGATTGCCATCAGATCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTSAGTG*IAIRSV Trigger: GACCGATCTGATGGCAATGCACCCAGTGCCAGCACT...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCTCACCCTGCAACAGATaGATGTTGGAAGGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLISPCNR*MLEGKL Trigger: CAACTTCCCTTCCAACATGCATCTGTTGCAGGGTGA...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACACCGTTCACTCTCAGGTaGTCTATCAAGATGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTPFTLR*SIKMPS Trigger: GGACGGCATCTTGATAGATCACCTGAGAGTGAACGG...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS-3UTR TCA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTGAGGAGAAGACGAGATaGTCGATCATTGTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSGSSNQQSPRLVHCVEAEEKTR*SIIVTV Trigger: AACAGTGACAATGATCGATCATCTCGTCTTCTCCTC...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | CGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAATCCAAACGGAGCCGCTaGGTGATCTTGAGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCKQRGQGLPSIHFQAEKSKRSR*VILSWA Trigger: GGCCCAACTCAAGATCACTCAGCGGCTCCGTTTGGA...TTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | GCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACATTTGCTGCTCCCATTGCTaGCGCCGGAGCCCCCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: ANKGVKVCRQFTSRQKNICCSHC*RRSPLT Trigger: AGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCA...AATGTTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCCCTCAAAGGGTCAGGTaGTCTATGTCCAAAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIPQRVR*SMSKSI Trigger: GATACTTTTGGACATAGAGCACCTGACCCTTTGAGG...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTCAGACATTGCAAGTTTaGCCCTGTGAGACATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NSGSSNQQSPRLVHCVEAQTLQV*PCETCL Trigger: TAGACATGTCTCACAGGGCCAAACTTGCAATGTCTG...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGCATTTTCCGTCACAGTaGTATCTAAGTTGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLAPASCMPANSTLIVHFPSQ*YLSCPR Trigger: TCTTGGGCAACTTAGATATCACTGTGACGGAAAATG...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACACCGTCTATCTCTGACTaGGGAAGACCTTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTPSISD*GRPFQE Trigger: CTCTTGGAAAGGTCTTCCCCAGTCAGAGATAGACGG...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTAATTTTGCCAGACATTaGAAGTTTGGCCCTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LECLPRLLACQQTAPSSCNFARH*KFGPVR Trigger: TCTCACAGGGCCAAACTTGCAATGTCTGGCAAAATT...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAACGATGTTCTGTGTCTaGAAAGTCTACCCTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKTMFCV*KVYPEA Trigger: CGCCTCAGGGTAGACTTTGCAGACACAGAACATCGT...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | ACATTTAAAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTTGGTGCAAATGCTCCCCACGAGAACTaGAGTCCTCACCGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFKRQPEHFSFFWQFGANAPHEN*SPHRHG Trigger: CCCGTGGCGGTGAGGACTCCAGTTCTCGTGGGGAGC...ATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTTTAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCTTCATACTGTATATATaGCCAACTGTCACCTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: RLRVLAPASCMPANSTLIFILYI*PTVTFT Trigger: CGTAAAGGTGACAGTTGGGCATATATACAGTATGAA...GATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAACCAGGCAGCATGAGCTaGATCCAAACTTTCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKPGSMS*IQTFIL Trigger: CAGTATGAAAGTTTGGATGCAGCTCATGCTGCCTGG...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | ACATTTAAAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTTGGTGCAAATCAGCCTTCGCTTCCTTaGCTGGTCCCTGCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFKRQPEHFSFFWQFGANQPSLP*LVPAAG Trigger: CCCAGCAGCAGGGACCAGCCAAGGAAGCGAAGGCTG...ATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTTTAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACAGCAACAGATGCATGTTaGAAGGGAAGTTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTATDAC*KGSCCS Trigger: AGAACAGCAACTTCCCTTCCAACATGCATCTGTTGC...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | GCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACATTCATCACCGAAGCGTTTaGACTCGTGAAACAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ANKGVKVCRQFTSRQKNIHHRSV*TRETAR Trigger: ACGGGCTGTTTCACGAGTTCAAACGCTTCGGTGATG...AATGTTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | CGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACTGAGGAATTTTTGGTaGTCGGGGAGCTGTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCKQRGQGLPSIHFQAEKLRNFW*SGSCNC Trigger: ACAGTTACAGCTCCCCGAGCACCAAAAATTCCTCAG...TTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR GCA 90 bp | GCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACATTTTCAGATTTGGCCAGTaGCTTGGCAGGGGAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ANKGVKVCRQFTSRQKNIFRFGQ*LGRGIQ Trigger: CTGGATTCCCCTGCCAAGGCACTGGCCAAATCTGAA...AATGTTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | GCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACATTCGCCTGAGGAATTTTTaGTGCTCGGGGAGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ANKGVKVCRQFTSRQKNIRLRNF*CSGSCN Trigger: GTTACAGCTCCCCGAGCACCAAAAATTCCTCAGGCG...AATGTTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | ACATTTAAAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTTGGTGCAAATTTCTCGAACCGGTGGTaGGGGTGGCACCCAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFKRQPEHFSFFWQFGANFSNRW*GWHPVR Trigger: TCTGACTGGGTGCCACCCCCACCACCGGTTCGAGAA...ATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTTTAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAACTTTACGGTAGTCTATaGTTCGAATGGTGCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKLYGSL*FEWCQI Trigger: GATTTGGCACCATTCGAACCATAGACTACCGTAAAG...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CCA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAGTCTATGGTTCGAATaGTGCCAAATCGGTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SAANKGVKVCRQFTSRQKSLWFE*CQIGQI Trigger: AATTTGACCGATTTGGCACCATTCGAACCATAGACT...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | CGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACTAGATTCTCAAATTTaGGAAAGCCATAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCKQRGQGLPSIHFQAEKLDSQI*ESHRYW Trigger: CCAGTACCTATGGCTTTCTCAAATTTGAGAATCTAG...TTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR TCA 90 bp | ACATTTAAAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTTGGTGCAAATGCAAGTTTGGCCCTGTaGGACATGTCTAGATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFKRQPEHFSFFWQFGANASLAL*DMSRFS Trigger: TGAGAATCTAGACATGTCTCACAGGGCCAAACTTGC...ATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTTTAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| 3UTR CAA 72 bp | AAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTaGGTGCAAATGTTAAAAGTGCAAGATAATGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KGNRSISPSFGN*VQMLKVQDNAI Trigger: AATTGCATTATCTTGCACTTTTAACATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS TCA 90 bp | GCCCGTCCTCCACCGCCTCGTCGCTCAGCTGGGACCCCAGCTCGCTaGTCTTCAGGGTCTTGTACTCCACGCCGTCCCCGCCGCCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARPPPPRRSAGTPAR*SSGSCTPRRPRRRA Trigger: CGCCCGGCGGCGGGGACGGCGTGGAGTACAAGACCCTGAAGATCAGCGAGCTGGGGTCCCAGCTGAGCGACGAGGCGGTGGAGGACGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 90 bp | GCCGCGACCCGCCGCTGTCCGTCTTCCCGCTGCTGCTCCCATTGCTaGCGCCGGAGCCCCCTAACTTCTTGCTCCGCTCCCCACGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AATRRCPSSRCCSHC*RRSPLTSCSAPHEN Trigger: GTTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGGGAAGACGGACAGCGGCGGGTCGCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 90 bp | TCCCGCTGCTGCTCCCATTGCTGCCGCCGGAGCCCCCTAACTTCTTaGTCCGCTCCCCACGAGAACTGGAGTCCTCACCGCCACGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRCCSHCCRRSPLTS*SAPHENWSPHRHGS Trigger: GCTCCCGTGGCGGTGAGGACTCCAGTTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS-3UTR CAA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGCCGCCACGGGAGCGCTaGGGCTTGACCGGCGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRVLAPASCMPANSTLIVPPRER*GLTGER Trigger: GCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGG...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS TCA 90 bp | CCCCACGAGAACTGGAGTCCTCACCGCCACGGGAGCGCTTGGGCTTaGCCGGCGAGCGCTCCTTTCCTTTCATTGTTGAGGGTCGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PHENWSPHRHGSAWA*PASAPFLSLLRVAG Trigger: TCCGGCGACCCTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGGTGAGGACTCCAGTTCTCGTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS TCA 90 bp | GGAGCGCTTGGGCTTGACCGGCGAGCGCTCCTTTCCTTTCATTGTTaGGGGTCGCCGGAGGTCGTCTCTGCGGAGCTGACTAACCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GALGLDRRALLSFHC*GSPEVVSAELTNPP Trigger: TGGCGGGTTAGTCAGCTCCGCAGAGACGACCTCCGGCGACCCTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS-3UTR CAA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGCGGGAGCGCTTGGGCTaGACCGGCGAGCGCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLECLPRLLACQQTAPSSRERLG*TGERSF Trigger: AAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCG...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS-3UTR CAA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGCGGCCTCTGGCATGCTaGGCCGCCCTCGCGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVLAPASCMPANSTLIVRPLAC*AALASS Trigger: AGAGGACGCGAGGGCGGCCAAGCATGCCAGAGGCCG...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS TCA 90 bp | TTTCCTTTCATTGTTGAGGGTCGCCGGAGGTCGTCTCTGCGGAGCTaGCTAACCCGCCACCCCGCGCTCGTTTCACACAGCGGACTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPFIVEGRRRSSLRS*LTRHPALVSHSGLA Trigger: TGCGAGTCCGCTGTGTGAAACGAGCGCGGGGTGGCGGGTTAGTCAGCTCCGCAGAGACGACCTCCGGCGACCCTCAACAATGAAAGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
||
| CDS-3UTR CAA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACAGCAGCCTTCGCTTCCTaGGCTGGTCCCTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTAAFAS*AGPCCW Trigger: CCAGCAGCAGGGACCAGCCAAGGAAGCGAAGGCTGC...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | GCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAAAACATTCCGCTGCTGCTCCCATaGCTGCCGCCGGAGCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: ANKGVKVCRQFTSRQKNIPLLLP*LPPEPP Trigger: AGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGG...AATGTTTTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTTTGAGTTGGGCCACTTaGCCTCCAGTTGAGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LECLPRLLACQQTAPSSCLSWAT*PPVEPS Trigger: GGAGGGCTCAACTGGAGGCAAAGTGGCCCAACTCAA...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CCA 90 bp | ACTAGTTGCAGCCCGAGCACTGCGTTCTCGAACCGGTGGTGGGGGTaGCACCCAGTCAGAATCAGTATAAAGGTCCCTATCACGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: TSCSPSTAFSNRWWG*HPVRISIKVPITIS Trigger: AGAGATCGTGATAGGGACCTTTATACTGATTCTGACTGGGTGCCACCCCCACCACCGGTTCGAGAACGCAGTGCTCGGGCTGCAACTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | TTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTCCTTTCCTTTCATTGTaGAGGGTCGCCGGAGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: LECLPRLLACQQTAPSSCPFLSL*RVAGGR Trigger: ACGACCTCCGGCGACCCTCAACAATGAAAGGAAAGG...ACACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | GGACCGAGAAGCAAAGGATCCCCTTCACTGCAAACAAAGGGGGTCACTGTAACAGAGCCCCCTAACTTCTaGCTCCGCTCCCCACGAGAA | + |
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Preference number: 5 (lower is better) Translates to: GPRSKGSPSLQTKGVTVTEPPNF*LRSPRE Trigger: TTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCTC...TGTTACAGTGACCCCCTTTGTTTGCAGTGAAGGGGATCCTTTGCTTCTCGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | AACTCCGGCTCTTCAAACCAGCAAAGCCCCCGACTCGTGCACTGTGTTGAGGCTTTTTCCTTGTCTTTATaGCCTCCCACAGGGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NSGSSNQQSPRLVHCVEAFSLSL*PPTGRL Trigger: CAGCCTCCCTGTGGGAGGCAATAAAGACAAGGAAAA...AGCCTCAACACAGTGCACGAGTCGGGGGCTTTGCTGGTTTGAAGAGCCGGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGACCCCGGTGTTTTCCTaGTCTTTATTGCCTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: LRVLAPASCMPANSTLIVTPVFS*SLLPPT Trigger: TGTGGGAGGCAATAAAGACAAGGAAAACACCGGGGT...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | GGCTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGACAGTGATATCTAAGTaGCCCAAGAAAAGTGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: GLECLPRLLACQQTAPSSTVISK*PKKSVR Trigger: CCGGACACTTTTCTTGGGCAACTTAGATATCACTGT...CGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | CTTAGAGTGCTTGCCCCGGCTTCTTGCATGCCAGCAAACAGCACCCTCATCGTGTGCAACAGATGCATGTaGGAAGGGAAGTTGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LRVLAPASCMPANSTLIVCNRCM*EGKLLF Trigger: GAACAGCAACTTCCCTTCCAACATGCATCTGTTGCA...CACGATGAGGGTGCTGTTTGCTGGCATGCAAGAAGCCGGGGCAAGCACTCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | TCCGCTGCAAACAAAGGGGTCAAGGTTTGCCGTCAATTCACTTCCAGGCAGAAACCACTTTGCCTCCAGTaGAGCCCTCCACAAGTAGAC | + |
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Preference number: 5 (lower is better) Translates to: SAANKGVKVCRQFTSRQKPLCLQ*SPPQVD Trigger: GTCTACTTGTGGAGGGCTCAACTGGAGGCAAAGTGG...TTTCTGCCTGGAAGTGAATTGACGGCAAACCTTGACCCCTTTGTTTGCAGCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS-3UTR CAA 90 bp | ACATTTAAAAGGCAACCGGAGCATTTCTCCTTCTTTTGGCAATTTGGTGCAAATTCGCACGCCGCCATCTaGGACTCCGCCGCGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: TFKRQPEHFSFFWQFGANSHAAI*DSAAAK Trigger: CTTTGCCGCGGCGGAGTCCAAGATGGCGGCGTGCGA...ATTTGCACCAAATTGCCAAAAGAAGGAGAAATGCTCCGGTTGCCTTTTAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS TCA 90 bp | TCTATCTCTGACTGGGGAAGACCTTTCCAAGAGGAGAAGACGAGATaGTCGATCATTGTCACTGTTGTAGCGATCTCTGTTACTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SISDWGRPFQEEKTR*SIIVTVVAISVTAQ Trigger: CTGAGCAGTAACAGAGATCGCTACAACAGTGACAATGATCGATCATCTCGTCTTCTCCTCTTGGAAAGGTCTTCCCCAGTCAGAGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 72 bp | CGCTCGTTTCACACAGCGGACTCGCACGCCGCCATCTaGGACTCCGCCGCGGCAAAGGCTCCCGCCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSFHTADSHAAI*DSAAAKAPAPQ Trigger: CTGCGGGGCGGGAGCCTTTGCCGCGGCGGAGTCCAAGATGGCGGCGTGCGAGTCCGCTGTGTGAAACGAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 72 bp | CGCCGCTGTCCGTCTTCCCGCTGCTGCTCCCATTGCTaGCGCCGGAGCCCCCTAACTTCTTGCTCCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RRCPSSRCCSHC*RRSPLTSCSAP Trigger: GGGAGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGGGAAGACGGACAGCGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CCA 72 bp | GCTCGTTTCACACAGCGGACTCGCACGCCGCCATCTTaGACTCCGCCGCGGCAAAGGCTCCCGCCCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ARFTQRTRTPPS*TPPRQRLPPRR Trigger: TCTGCGGGGCGGGAGCCTTTGCCGCGGCGGAGTCCAAGATGGCGGCGTGCGAGTCCGCTGTGTGAAACGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 72 bp | GACCCGCCGCTGTCCGTCTTCCCGCTGCTGCTCCCATaGCTGCCGCCGGAGCCCCCTAACTTCTTGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: DPPLSVFPLLLP*LPPEPPNFLLR Trigger: GCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGGGAAGACGGACAGCGGCGGGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 72 bp | ACCCGCCGCTGTCCGTCTTCCCGCTGCTGCTCCCATTaGTGCCGCCGGAGCCCCCTAACTTCTTGCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: TRRCPSSRCCSH*CRRSPLTSCSA Trigger: AGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGGGAAGACGGACAGCGGCGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CCA 72 bp | TGGTGCTCGGGGAGCTGTAACTGTGCAAGCGGCTACTaGAGCTGCCCCCGCCGGTCTCGTACTCGCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WCSGSCNCASGY*SCPRRSRTRGC Trigger: GCAGCCGCGAGTACGAGACCGGCGGGGGCAGCTCCAGTAGCCGCTTGCACAGTTACAGCTCCCCGAGCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 90 bp | TTCCCGCTGCTGCTCCCATTGCTGCCGCCGGAGCCCCCTAACTTCTaGCTCCGCTCCCCACGAGAACTGGAGTCCTCACCGCCACGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FPLLLPLLPPEPPNF*LRSPRELESSPPRE Trigger: CTCCCGTGGCGGTGAGGACTCCAGTTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAGCAGCGGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 72 bp | TGCTCCCATTGCTGCCGCCGGAGCCCCCTAACTTCTTaGTCCGCTCCCCACGAGAACTGGAGTCCTCACCGC | + |
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Preference number: 6 (lower is better) Translates to: CSHCCRRSPLTS*SAPHENWSPHR Trigger: GCGGTGAGGACTCCAGTTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 72 bp | CTGCTCCCATTGCTGCCGCCGGAGCCCCCTAACTTCTaGCTCCGCTCCCCACGAGAACTGGAGTCCTCACCG | + |
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Preference number: 6 (lower is better) Translates to: LLPLLPPEPPNF*LRSPRELESSP Trigger: CGGTGAGGACTCCAGTTCTCGTGGGGAGCGGAGCAAGAAGTTAGGGGGCTCCGGCGGCAGCAATGGGAGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 90 bp | TCCCCACGAGAACTGGAGTCCTCACCGCCACGGGAGCGCTTGGGCTaGACCGGCGAGCGCTCCTTTCCTTTCATTGTTGAGGGTCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPRELESSPPRERLG*TGERSFPFIVEGRR Trigger: CCGGCGACCCTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGGTGAGGACTCCAGTTCTCGTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS TCA 72 bp | ATTGTTGAGGGTCGCCGGAGGTCGTCTCTGCGGAGCTaGCTAACCCGCCACCCCGCGCTCGTTTCACACAGC | + |
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Preference number: 6 (lower is better) Translates to: IVEGRRRSSLRS*LTRHPALVSHS Trigger: GCTGTGTGAAACGAGCGCGGGGTGGCGGGTTAGTCAGCTCCGCAGAGACGACCTCCGGCGACCCTCAACAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 90 bp | CTCCGCTCCCCACGAGAACTGGAGTCCTCACCGCCACGGGAGCGCTaGGGCTTGACCGGCGAGCGCTCCTTTCCTTTCATTGTTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LRSPRELESSPPRER*GLTGERSFPFIVEG Trigger: ACCCTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGGTGAGGACTCCAGTTCTCGTGGGGAGCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS TCA 72 bp | GGGCTTGACCGGCGAGCGCTCCTTTCCTTTCATTGTTaGGGGTCGCCGGAGGTCGTCTCTGCGGAGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: GLDRRALLSFHC*GSPEVVSAELT Trigger: AGTCAGCTCCGCAGAGACGACCTCCGGCGACCCTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 72 bp | CCACGAGAACTGGAGTCCTCACCGCCACGGGAGCGCTaGGGCTTGACCGGCGAGCGCTCCTTTCCTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: PRELESSPPRER*GLTGERSFPFI Trigger: AATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGGTGAGGACTCCAGTTCTCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS TCA 72 bp | AACTGGAGTCCTCACCGCCACGGGAGCGCTTGGGCTTaGCCGGCGAGCGCTCCTTTCCTTTCATTGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: NWSPHRHGSAWA*PASAPFLSLLR Trigger: CCTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGGTGAGGACTCCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 72 bp | GAACTGGAGTCCTCACCGCCACGGGAGCGCTTGGGCTaGACCGGCGAGCGCTCCTTTCCTTTCATTGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: ELESSPPRERLG*TGERSFPFIVE Trigger: CTCAACAATGAAAGGAAAGGAGCGCTCGCCGGTCAAGCCCAAGCGCTCCCGTGGCGGTGAGGACTCCAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CCA 72 bp | AGCCCGAGCACTGCGTTCTCGAACCGGTGGTGGGGGTaGCACCCAGTCAGAATCAGTATAAAGGTCCCTATC | + |
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Preference number: 6 (lower is better) Translates to: SPSTAFSNRWWG*HPVRISIKVPI Trigger: GATAGGGACCTTTATACTGATTCTGACTGGGTGCCACCCCCACCACCGGTTCGAGAACGCAGTGCTCGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CCA 72 bp | TCTGGGAAGGTGGCTTCTGCTTTGATGAAGAAGTGCTaGCACTGGGTGCATTGCCATCAGATCGGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SGKVASALMKKC*HWVHCHQIGLP Trigger: AGGAAGACCGATCTGATGGCAATGCACCCAGTGCCAGCACTTCTTCATCAAAGCAGAAGCCACCTTCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 72 bp | GTTTCTGGGAAGGTGGCTTCTGCTTTGATGAAGAAGTaGTGGCACTGGGTGCATTGCCATCAGATCGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSGKVASALMKK*WHWVHCHQIGL Trigger: AAGACCGATCTGATGGCAATGCACCCAGTGCCAGCACTTCTTCATCAAAGCAGAAGCCACCTTCCCAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CCA 72 bp | AAGGTGGCTTCTGCTTTGATGAAGAAGTGCTGGCACTaGGTGCATTGCCATCAGATCGGTCTTCCTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: KVASALMKKCWH*VHCHQIGLPFS Trigger: TGAAAAAGGAAGACCGATCTGATGGCAATGCACCCAGTGCCAGCACTTCTTCATCAAAGCAGAAGCCACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS TCA 72 bp | GACTGGGGAAGACCTTTCCAAGAGGAGAAGACGAGATaGTCGATCATTGTCACTGTTGTAGCGATCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: DWGRPFQEEKTR*SIIVTVVAISV Trigger: AACAGAGATCGCTACAACAGTGACAATGATCGATCATCTCGTCTTCTCCTCTTGGAAAGGTCTTCCCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS GCA 72 bp | TCTGCTTTGATGAAGAAGTGCTGGCACTGGGTGCATTaGCATCAGATCGGTCTTCCTTTTTCAGAGGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SALMKKCWHWVH*HQIGLPFSEGF Trigger: AAAACCCTCTGAAAAAGGAAGACCGATCTGATGGCAATGCACCCAGTGCCAGCACTTCTTCATCAAAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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| CDS CAA 72 bp | TTCTGCTTTGATGAAGAAGTGCTGGCACTGGGTGCATaGCCATCAGATCGGTCTTCCTTTTTCAGAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FCFDEEVLALGA*PSDRSSFFRGF Trigger: AAACCCTCTGAAAAAGGAAGACCGATCTGATGGCAATGCACCCAGTGCCAGCACTTCTTCATCAAAGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061772.11 |
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