Pregenerated sensors for RBM14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006456Ensembl transcript IDs: ENSMUST00000006625.8, ENSMUST00000113793.4, ENSMUST00000180008.2
Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TCTCTCTCCCTTCCTGTGGTGCCCCATCCCCAGGATGGCCCTACATaGGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAAT | + |
Preference number: 1 (lower is better) Translates to: SLSLPVVPHPQDGPT*GAGSQSASELPAGN Trigger: ATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCCATCCTGGGGATGGGGCACCACAGGAAGGGAGAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR GCA 90 bp | CATCTGAGCTGCCCGCAGGTAATCATTATAGGAGCCCGAATAGCGTaGGTAATCGGAATGGGCATCGGGCAGGCGACGGTAATCCAGCGA | + |
Preference number: 1 (lower is better) Translates to: HLSCPQVIIIGARIA*VIGMGIGQATVIQR Trigger: TCGCTGGATTACCGTCGCCTGCCCGATGCCCATTCCGATTACGCACGCTATTCGGGCTCCTATAATGATTACCTGCGGGCAGCTCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR GCA 90 bp | AGGATGGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTaGCCGCAGGTAATCATTATAGGAGCCCGAATAGCGTGCGTAATC | + |
Preference number: 1 (lower is better) Translates to: RMALHAALVARVHLS*PQVIIIGARIACVI Trigger: GATTACGCACGCTATTCGGGCTCCTATAATGATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 90 bp | ATCAACAGAACGACGGACGAAAGTAGGGTCCCCAACTTCCCAGGGTaGACGCACCTCATAAGCTTGCCTTCAGCCAGTGAGTGCCAAAAG | + |
Preference number: 1 (lower is better) Translates to: INRTTDESRVPNFPG*THLISLPSASECQK Trigger: CTTTTGGCACTCACTGGCTGAAGGCAAGCTTATGAGGTGCGTCCACCCTGGGAAGTTGGGGACCCTACTTTCGTCCGTCGTTCTGTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR TCA 90 bp | CACATGATAGAGGGAGGGAATGAAAAGCCACCATTGGGAGAGGTATaGGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTC | + |
Preference number: 1 (lower is better) Translates to: HMIEGGNEKPPLGEV*ERVVITWVCTLPYL Trigger: GAGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCCAATGGTGGCTTTTCATTCCCTCCCTCTATCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CCA 90 bp | CCCTGTCAGAAGGCTCATCATACTATCCAGGTCAAGGAACCAACCTaGGTTCTTCAGGTCAGTGGGAAACCAAGCCCTCTGCTGAAGCTC | + |
Preference number: 1 (lower is better) Translates to: PCQKAHHTIQVKEPT*VLQVSGKPSPLLKL Trigger: GAGCTTCAGCAGAGGGCTTGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATGATGAGCCTTCTGACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 90 bp | CCCAAACAAGCTATTCCCACTCATGGGCCCTGCACAAAAAGACCTTaGTTTATCAACAGAACGACGGACGAAAGTAGGGTCCCCAACTTC | + |
Preference number: 1 (lower is better) Translates to: PKQAIPTHGPCTKRP*FINRTTDESRVPNF Trigger: GAAGTTGGGGACCCTACTTTCGTCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAATAGCTTGTTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 90 bp | TGCCATTGGGGACAGGGAGGGTATACCAGATTTGTCTCAAACAGTTaGTGTCCCTGTCAGAAGGCTCATCATACTATCCAGGTCAAGGAA | + |
Preference number: 1 (lower is better) Translates to: CHWGQGGYTRFVSNS*CPCQKAHHTIQVKE Trigger: TTCCTTGACCTGGATAGTATGATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCCCCAATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 90 bp | CAAGGTGAGTCTGGTCTACATTCCCAAACAAGCTATTCCCACTCATaGGCCCTGCACAAAAAGACCTTGGTTTATCAACAGAACGACGGA | + |
Preference number: 1 (lower is better) Translates to: QGESGLHSQTSYSHS*ALHKKTLVYQQNDG Trigger: TCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAATAGCTTGTTTGGGAATGTAGACCAGACTCACCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR TCA 90 bp | TTTCTTCTAGCTGTCACGTCTTCCTGGATGTCAAACTGGCTCACCTaGCAGTGCAATCAAGACAATGACAACCAGGTTTCCAAACCACGA | + |
Preference number: 1 (lower is better) Translates to: FLLAVTSSWMSNWLT*QCNQDNDNQVSKPR Trigger: TCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCACTGTCAGGTGAGCCAGTTTGACATCCAGGAAGACGTGACAGCTAGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR GCA 90 bp | AGTCTGGTCTACATTCCCAAACAAGCTATTCCCACTCATGGGCCCTaGACAAAAAGACCTTGGTTTATCAACAGAACGACGGACGAAAGT | + |
Preference number: 1 (lower is better) Translates to: SLVYIPKQAIPTHGP*TKRPWFINRTTDES Trigger: ACTTTCGTCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAATAGCTTGTTTGGGAATGTAGACCAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR TCA 90 bp | TTCCTGGATGTCAAACTGGCTCACCTGACAGTGCAATCAAGACAATaGCAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTATTTG | + |
Preference number: 1 (lower is better) Translates to: FLDVKLAHLTVQSRQ*QPGFQTTNRPKFYL Trigger: CAAATAAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCACTGTCAGGTGAGCCAGTTTGACATCCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR GCA 90 bp | AGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATaGCAGTCACCATCAGCTAAAACATCAGTGGTAAGCGGGGATTTG | + |
Preference number: 1 (lower is better) Translates to: RFLTPPTWRDRELGL*QSPSAKTSVVSGDL Trigger: CAAATCCCCGCTTACCACTGATGTTTTAGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 90 bp | AATCGGAATGGGCATCGGGCAGGCGACGGTAATCCAGCGAGGACTTaGTCGGCGAGCGGCGGAACGAAAGCTGCGACTCTGATAAACGGC | + |
Preference number: 2 (lower is better) Translates to: NRNGHRAGDGNPART*SASGGTKAATLING Trigger: GCCGTTTATCAGAGTCGCAGCTTTCGTTCCGCCGCTCGCCGACAAAGTCCTCGCTGGATTACCGTCGCCTGCCCGATGCCCATTCCGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | ATCCCCAGGATGGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCGTCAAGGAACCAACCTaGGTTCTTCAGGTCAGTGGG | + |
Preference number: 2 (lower is better) Translates to: IPRMALHAALVARVHLSCVKEPT*VLQVSG Trigger: CCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGAC...GCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCCATCCTGGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | CATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACCAGACAGGCAGGGCCCCTaGACTGCTGGCATAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: HTIQVKEPTWVLQVSGKPDRQGP*TAGIAG Trigger: CCCAGCTATGCCAGCAGTCCAGGGGCCCTGCCTGTC...TGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 90 bp | AGACAGTTGAGGGCAGGGCTCCAGGTAGGCCTAGGGGAGATGCCATaGGGGACAGGGAGGGTATACCAGATTTGTCTCAAACAGTTGGTG | + |
Preference number: 2 (lower is better) Translates to: RQLRAGLQVGLGEMP*GTGRVYQICLKQLV Trigger: CACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCCCCAATGGCATCTCCCCTAGGCCTACCTGGAGCCCTGCCCTCAACTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | ATCCCCAGGATGGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCTAACACCACCTACTTaGAGAGATAGGGAATTGGGA | + |
Preference number: 2 (lower is better) Translates to: IPRMALHAALVARVHLSCLTPPT*RDRELG Trigger: TCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAG...GCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCCATCCTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | GGGAGAGGTATGAGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTGGTTCTTCAGGTCAGTaGGAAACCAAGCCCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: GRGMREGGDNLGLHPTLPGSSGQ*ETKPSA Trigger: AGCAGAGGGCTTGGTTTCCCACTGACCTGAAGAACC...AGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCCATTGGGAGAGGTATaGGAGAGGGTGGTGATAACC | + |
Preference number: 2 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSPLGEV*ERVVIT Trigger: GGTTATCACCACCCTCTCTCATACCTCTCCCAATGG...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTTTCTGGGGAGATGGCTaGGTAGAGGGAAAACCACAG | + |
Preference number: 2 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSFWGDG*VEGKPQ Trigger: CTGTGGTTTTCCCTCTACCCAGCCATCTCCCCAGAA...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | GGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATAGTGGGAAAAATCTATaGGCCAATCCTGCAAAATGT | + |
Preference number: 2 (lower is better) Translates to: GPTCGAGSQSASELPAGNSGKNL*ANPAKC Trigger: ACATTTTGCAGGATTGGCTCATAGATTTTTCCCACT...ATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR GCA 90 bp | TGCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTGCAGGGCCCCTGGACTaGTGGCATAGCTGGGCACAG | + |
Preference number: 2 (lower is better) Translates to: CNQDNDNQVSKPRIAPSFAGPLD*WHSWAQ Trigger: CTGTGCCCAGCTATGCCAGCAGTCCAGGGGCCCTGC...AAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR-3UTR CCA 90 bp | TGCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTGACAGGCAGGGCCCCTaGACTGCTGGCATAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: CNQDNDNQVSKPRIAPSFDRQGP*TAGIAG Trigger: CCCAGCTATGCCAGCAGTCCAGGGGCCCTGCCTGTC...AAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR-3UTR CCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCAAGGGAGGGGCCAATaGCTCCTGTTTCCCTCCCAT | + |
Preference number: 2 (lower is better) Translates to: LASKKKNAPPDISCRLYHQGRGQ*LLFPSH Trigger: ATGGGAGGGAAACAGGAGCCATTGGCCCCTCCCTTG...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | CCCACTCATGGGCCCTGCACAAAAAGACCTTGGTTTATCAACAGAACGACGGACCCATTGGGAGAGGTATaGGAGAGGGTGGTGATAACC | + |
Preference number: 2 (lower is better) Translates to: PTHGPCTKRPWFINRTTDPLGEV*ERVVIT Trigger: GGTTATCACCACCCTCTCTCATACCTCTCCCAATGG...GTCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | GTCCAACCACTTGATCTGAACTCTCTAGTCCCAAAGATGGCATGCTATTTAAGAGGGCCCCTGGACTGCTaGCATAGCTGGGCACAGAGG | + |
Preference number: 2 (lower is better) Translates to: VQPLDLNSLVPKMACYLRGPLDC*HSWAQR Trigger: CCTCTGTGCCCAGCTATGCCAGCAGTCCAGGGGCCC...TCTTAAATAGCATGCCATCTTTGGGACTAGAGAGTTCAGATCAAGTGGTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR CAA 90 bp | CTATGCCAGTCACCATCAGCTAAAACATCAGTGGTAAGCGGGGATTaGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAAC | + |
Preference number: 2 (lower is better) Translates to: LCQSPSAKTSVVSGD*DTDQLTVPQDLSLN Trigger: GTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGATGGTGACTGGCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 90 bp | GAAAGTAGGGTCCCCAACTTCCCAGGGTGGACGCACCTCATAAGCTaGCCTTCAGCCAGTGAGTGCCAAAAGGACTACTTTCTTTCACAT | + |
Preference number: 2 (lower is better) Translates to: ESRVPNFPGWTHLIS*PSASECQKDYFLSH Trigger: ATGTGAAAGAAAGTAGTCCTTTTGGCACTCACTGGCTGAAGGCAAGCTTATGAGGTGCGTCCACCCTGGGAAGTTGGGGACCCTACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 90 bp | AGGCCTAGGGGAGATGCCATTGGGGACAGGGAGGGTATACCAGATTaGTCTCAAACAGTTGGTGTCCCTGTCAGAAGGCTCATCATACTA | + |
Preference number: 2 (lower is better) Translates to: RPRGDAIGDREGIPD*SQTVGVPVRRLIIL Trigger: TAGTATGATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCCCCAATGGCATCTCCCCTAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | GGAACGAAAGCTGCGACTCTGATAAACGGCGGTAATCAGAGAGCTCGGCTAAACAGCAAGATGTGCTGCTaGGGCAAAGAAACAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: GTKAATLINGGNQRARLNSKMCC*GKETKQ Trigger: CTGCTTTGTTTCTTTGCCTCAGCAGCACATCTTGCT...GTTTAGCCGAGCTCTCTGATTACCGCCGTTTATCAGAGTCGCAGCTTTCGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | TTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCTCAAACTGGCTCACCTaGCAGTGCAATCAAGACAAT | + |
Preference number: 2 (lower is better) Translates to: FHTHSGSSGCLSSSCHVFSNWLT*QCNQDN Trigger: ATTGTCTTGATTGCACTGTCAGGTGAGCCAGTTTGA...GAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR-3UTR TCA 90 bp | GGAGGGTATACCAGATTTGTCTCAAACAGTTGGTGTCCCTGTCAGAAGGCTCATCCAAACCAGCCAAGGTaGGTCTGGTCTACATTCCCA | + |
Preference number: 2 (lower is better) Translates to: GGYTRFVSNSWCPCQKAHPNQPR*VWSTFP Trigger: TGGGAATGTAGACCAGACTCACCTTGGCTGGTTTGG...ATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 90 bp | ATGCCATTGGGGACAGGGAGGGTATACCAGATTTGTCTCAAACAGTaGGTGTCCCTGTCAGAAGGCTCATCATACTATCCAGGTCAAGGA | + |
Preference number: 2 (lower is better) Translates to: MPLGTGRVYQICLKQ*VSLSEGSSYYPGQG Trigger: TCCTTGACCTGGATAGTATGATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCCCCAATGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | TGCCTTTCTTCTAGCTGTCACGTCTTCCTGGATGTCAAACTGGCTCACCTGACAAGCAAGATGTGCTGCTaGGGCAAAGAAACAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: CLSSSCHVFLDVKLAHLTSKMCC*GKETKQ Trigger: CTGCTTTGTTTCTTTGCCTCAGCAGCACATCTTGCT...TGTCAGGTGAGCCAGTTTGACATCCAGGAAGACGTGACAGCTAGAAGAAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR-3UTR CCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACATGAAAAGCCACCATTaGGAGAGGTATGAGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: LASKKKNAPPDISCRLYHMKSHH*ERYERG Trigger: CCCTCTCTCATACCTCTCCCAATGGTGGCTTTTCAT...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | ACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCAGTCACCATCAGCTATGAAAAGCCACCATTaGGAGAGGTATGAGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: TPPTWRDRELGLCQSPSAMKSHH*ERYERG Trigger: CCCTCTCTCATACCTCTCCCAATGGTGGCTTTTCAT...AGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | TTCCCACTCATGGGCCCTGCACAAAAAGACCTTGGTTTATCAACAGAACGACGGCCACCTAAATCCCAATaGCCAGAACTGTTCAGACAC | + |
Preference number: 2 (lower is better) Translates to: FPLMGPAQKDLGLSTERRPPKSQ*PELFRH Trigger: GTGTCTGAACAGTTCTGGCCATTGGGATTTAGGTGG...CCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR GCA 90 bp | CATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACCACCTTCAGCCAGTGAGTaGCAAAAGGACTACTTTCTT | + |
Preference number: 2 (lower is better) Translates to: HTIQVKEPTWVLQVSGKPPSASE*QKDYFL Trigger: AAGAAAGTAGTCCTTTTGGCACTCACTGGCTGAAGG...TGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | TGCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTTTCTGGGGAGATGGCTaGGTAGAGGGAAAACCACAG | + |
Preference number: 2 (lower is better) Translates to: CNQDNDNQVSKPRIAPSFFWGDG*VEGKPQ Trigger: CTGTGGTTTTCCCTCTACCCAGCCATCTCCCCAGAA...AAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR-3UTR CCA 90 bp | GCAGGTAATCATTATAGGAGCCCGAATAGCGTGCGTAATCGGAATGGGCATCGGGGATCCTTCAGACAGTaGGAAAAATCTATGAGCCAA | + |
Preference number: 2 (lower is better) Translates to: AGNHYRSPNSVRNRNGHRGSFRQ*EKSMSQ Trigger: TTGGCTCATAGATTTTTCCCACTGTCTGAAGGATCC...CCGATGCCCATTCCGATTACGCACGCTATTCGGGCTCCTATAATGATTACCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR TCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCAACCAAGCCCTCTGCTaGAGCTCCCTTCCAAACCAG | + |
Preference number: 2 (lower is better) Translates to: ELRFLTPPTWRDRELGLCNQALC*SSLPNQ Trigger: CTGGTTTGGAAGGGAGCTTCAGCAGAGGGCTTGGTT...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCCCAACTTCCCAGGGTaGACGCACCTCATAAGCTTG | + |
Preference number: 2 (lower is better) Translates to: ELRFLTPPTWRDRELGLCPNFPG*THLISL Trigger: CAAGCTTATGAGGTGCGTCCACCCTGGGAAGTTGGG...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 90 bp | TCTAGTCCCAAAGATGGCATGCTATTTAAGATGAGCTTAATTCCATaGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTT | + |
Preference number: 2 (lower is better) Translates to: SSPKDGMLFKMSLIP*VARKPFQSPHSSTL Trigger: AAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGAATTAAGCTCATCTTAAATAGCATGCCATCTTTGGGACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR-3UTR GCA 90 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACAAACAAAGCAGGTTACTaGCAAACACAAAAGGGTCCT | + |
Preference number: 2 (lower is better) Translates to: KKKNAPPDISCRLYHLQTNKAGY*QTQKGP Trigger: AGGACCCTTTTGTGTTTGGCAGTAACCTGCTTTGTT...TGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR-3UTR CCA 90 bp | GCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTAAAGAAATTCCCATTCTaGGGAGATGGCTGGGTAGAG | + |
Preference number: 2 (lower is better) Translates to: AIKTMTTRFPNHESPQVLKKFPF*GDGWVE Trigger: CTCTACCCAGCCATCTCCCCAGAATGGGAATTTCTT...TAAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR CAA 90 bp | AAAGAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATaGGGACTATGCCAGTCACCATCAGCTAAAACATCAGTGGTAAGC | + |
Preference number: 2 (lower is better) Translates to: KELRFLTPPTWRDRE*GLCQSPSAKTSVVS Trigger: GCTTACCACTGATGTTTTAGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
||
3UTR GCA 72 bp | CTTCCTGTGGTGCCCCATCCCCAGGATGGCCCTACATaGGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCC | + |
Preference number: 3 (lower is better) Translates to: LPVVPHPQDGPT*GAGSQSASELP Trigger: GGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCCATCCTGGGGATGGGGCACCACAGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR-3UTR CAA 90 bp | CGGAATGGGCATCGGGCAGGCGACGGTAATCCAGCGAGGACTTTGTCGGCGAGCTGGAGAGATAGGGAATaGGGACTATGCCAGTCACCA | + |
Preference number: 3 (lower is better) Translates to: RNGHRAGDGNPARTLSASWRDRE*GLCQSP Trigger: TGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCA...GCTCGCCGACAAAGTCCTCGCTGGATTACCGTCGCCTGCCCGATGCCCATTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR CCA 72 bp | ACGACGGACGAAAGTAGGGTCCCCAACTTCCCAGGGTaGACGCACCTCATAAGCTTGCCTTCAGCCAGTGAG | + |
Preference number: 3 (lower is better) Translates to: TTDESRVPNFPG*THLISLPSASE Trigger: CTCACTGGCTGAAGGCAAGCTTATGAGGTGCGTCCACCCTGGGAAGTTGGGGACCCTACTTTCGTCCGTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR-3UTR CAA 90 bp | GGGAGAGGTATGAGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTGTGGTAAGCGGGGATTaGGACACGGACCAACTGACT | + |
Preference number: 3 (lower is better) Translates to: GRGMREGGDNLGLHPTLPVVSGD*DTDQLT Trigger: AGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC...AGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
||
3UTR-3UTR CAA 90 bp | CTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATCATTGTGGTAAGCGGGGATTaGGACACGGACCAACTGACT | + |
Preference number: 3 (lower is better) Translates to: LHAALVARVHLSCPQVIIVVSGD*DTDQLT Trigger: AGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC...AATGATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR-3UTR CAA 90 bp | TCCAGCGAGGACTTTGTCGGCGAGCGGCGGAACGAAAGCTGCGACTCTGATAAAACGCACCTCATAAGCTaGCCTTCAGCCAGTGAGTGC | + |
Preference number: 3 (lower is better) Translates to: SSEDFVGERRNESCDSDKTHLIS*PSASEC Trigger: GCACTCACTGGCTGAAGGCAAGCTTATGAGGTGCGT...TTTATCAGAGTCGCAGCTTTCGTTCCGCCGCTCGCCGACAAAGTCCTCGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR GCA 72 bp | TGCCCGCAGGTAATCATTATAGGAGCCCGAATAGCGTaGGTAATCGGAATGGGCATCGGGCAGGCGACGGTA | + |
Preference number: 3 (lower is better) Translates to: CPQVIIIGARIA*VIGMGIGQATV Trigger: TACCGTCGCCTGCCCGATGCCCATTCCGATTACGCACGCTATTCGGGCTCCTATAATGATTACCTGCGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR GCA 72 bp | CTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTaGCCGCAGGTAATCATTATAGGAGCCCGAATAGCG | + |
Preference number: 3 (lower is better) Translates to: LHAALVARVHLS*PQVIIIGARIA Trigger: CGCTATTCGGGCTCCTATAATGATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR GCA 72 bp | CAAGCACCCTTCCACACCCACTCTGGGTCTTCAGGCTaGCTTTCTTCTAGCTGTCACGTCTTCCTGGATGTC | + |
Preference number: 3 (lower is better) Translates to: QAPFHTHSGSSG*LSSSCHVFLDV Trigger: GACATCCAGGAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAAGGGTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
||
3UTR CCA 72 bp | CCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTaGGAAACCAAGCCCTCTGCTGAAGCTCCCTTCCAA | + |
Preference number: 3 (lower is better) Translates to: PGQGTNLGSSGQ*ETKPSAEAPFQ Trigger: TTGGAAGGGAGCTTCAGCAGAGGGCTTGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR TCA 72 bp | GAGGGAGGGAATGAAAAGCCACCATTGGGAGAGGTATaGGAGAGGGTGGTGATAACCTGGGTCTGCACCCTA | + |
Preference number: 3 (lower is better) Translates to: EGGNEKPPLGEV*ERVVITWVCTL Trigger: TAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCCAATGGTGGCTTTTCATTCCCTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CCA 72 bp | GGCCAGAACTGTTCAGACACTCACCCTCATGACTTTTaGACATCCCATAGAAGTAAGATCAAGGGAGGGGCC | + |
Preference number: 3 (lower is better) Translates to: GQNCSDTHPHDF*TSHRSKIKGGA Trigger: GGCCCCTCCCTTGATCTTACTTCTATGGGATGTCCAAAAGTCATGAGGGTGAGTGTCTGAACAGTTCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
3UTR TCA 72 bp | GTCAAACTGGCTCACCTGACAGTGCAATCAAGACAATaGCAACCAGGTTTCCAAACCACGAATCGCCCCAAG | + |
Preference number: 3 (lower is better) Translates to: VKLAHLTVQSRQ*QPGFQTTNRPK Trigger: CTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCACTGTCAGGTGAGCCAGTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
||
3UTR TCA 72 bp | GCTGTCACGTCTTCCTGGATGTCAAACTGGCTCACCTaGCAGTGCAATCAAGACAATGACAACCAGGTTTCC | + |
Preference number: 3 (lower is better) Translates to: AVTSSWMSNWLT*QCNQDNDNQVS Trigger: GGAAACCTGGTTGTCATTGTCTTGATTGCACTGTCAGGTGAGCCAGTTTGACATCCAGGAAGACGTGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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3UTR TCA 72 bp | AGGGTGGACGCACCTCATAAGCTTGCCTTCAGCCAGTaGGTGCCAAAAGGACTACTTTCTTTCACATCCATC | + |
Preference number: 3 (lower is better) Translates to: RVDAPHKLAFSQ*VPKGLLSFTSI Trigger: GATGGATGTGAAAGAAAGTAGTCCTTTTGGCACTCACTGGCTGAAGGCAAGCTTATGAGGTGCGTCCACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR GCA 72 bp | TGGACGCACCTCATAAGCTTGCCTTCAGCCAGTGAGTaGCAAAAGGACTACTTTCTTTCACATCCATCCCAC | + |
Preference number: 3 (lower is better) Translates to: WTHLISLPSASE*QKDYFLSHPSH Trigger: GTGGGATGGATGTGAAAGAAAGTAGTCCTTTTGGCACTCACTGGCTGAAGGCAAGCTTATGAGGTGCGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 72 bp | GCTATTCCCACTCATGGGCCCTGCACAAAAAGACCTTaGTTTATCAACAGAACGACGGACGAAAGTAGGGTC | + |
Preference number: 3 (lower is better) Translates to: AIPTHGPCTKRP*FINRTTDESRV Trigger: GACCCTACTTTCGTCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR-3UTR CAA 90 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACATGGAGAGATAGGGAATaGGGACTATGCCAGTCACCA | + |
Preference number: 3 (lower is better) Translates to: KKKNAPPDISCRLYHLQTWRDRE*GLCQSP Trigger: TGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCA...TGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CCA 72 bp | GGACAGGGAGGGTATACCAGATTTGTCTCAAACAGTTaGTGTCCCTGTCAGAAGGCTCATCATACTATCCAG | + |
Preference number: 3 (lower is better) Translates to: GQGGYTRFVSNS*CPCQKAHHTIQ Trigger: CTGGATAGTATGATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR GCA 72 bp | TACATTCCCAAACAAGCTATTCCCACTCATGGGCCCTaGACAAAAAGACCTTGGTTTATCAACAGAACGACG | + |
Preference number: 3 (lower is better) Translates to: YIPKQAIPTHGP*TKRPWFINRTT Trigger: CGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAATAGCTTGTTTGGGAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 72 bp | TCTGGTCTACATTCCCAAACAAGCTATTCCCACTCATaGGCCCTGCACAAAAAGACCTTGGTTTATCAACAG | + |
Preference number: 3 (lower is better) Translates to: SGLHSQTSYSHS*ALHKKTLVYQQ Trigger: CTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAATAGCTTGTTTGGGAATGTAGACCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR TCA 72 bp | GAGTTTAAGGATCCTTCAGACAGTGGGAAAAATCTATaGGCCAATCCTGCAAAATGTGGCTCCATCGGTTCA | + |
Preference number: 3 (lower is better) Translates to: EFKDPSDSGKNL*ANPAKCGSIGS Trigger: TGAACCGATGGAGCCACATTTTGCAGGATTGGCTCATAGATTTTTCCCACTGTCTGAAGGATCCTTAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CCA 72 bp | AAGGGAAAAGAATTAAGATTTCTAACACCACCTACTTaGAGAGATAGGGAATTGGGACTATGCCAGTCACCA | + |
Preference number: 3 (lower is better) Translates to: KGKELRFLTPPT*RDRELGLCQSP Trigger: TGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTCTTTTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATGGCCCGGTAGGTGGCTaGCTGGGCCGTCAGAGGCGC | + |
Preference number: 4 (lower is better) Translates to: GPTCGAGSQSASELPAGNGPVGG*LGRQRR Trigger: GCGCCTCTGACGGCCCAGCCAGCCACCTACCGGGCC...ATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 72 bp | GGGCATCGGGCAGGCGACGGTAATCCAGCGAGGACTTaGTCGGCGAGCGGCGGAACGAAAGCTGCGACTCTG | + |
Preference number: 4 (lower is better) Translates to: GHRAGDGNPART*SASGGTKAATL Trigger: CAGAGTCGCAGCTTTCGTTCCGCCGCTCGCCGACAAAGTCCTCGCTGGATTACCGTCGCCTGCCCGATGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GGCATCGGGCAGGCGACGGTAATCCAGCGAGGACTTTGTCGGCGAGCGGCGGAAAGCACGGTAAGAAGCTaGCTGAGCTGCCATGGGCTG | + |
Preference number: 4 (lower is better) Translates to: GIGQATVIQRGLCRRAAESTVRS*LSCHGL Trigger: CAGCCCATGGCAGCTCAGGCAGCTTCTTACCGTGCT...TTCCGCCGCTCGCCGACAAAGTCCTCGCTGGATTACCGTCGCCTGCCCGATGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | CCCCACACTCAAGCACCCTTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTCCACGTCACACTCGATaGCGCGTCCACGGCGCTCGA | + |
Preference number: 4 (lower is better) Translates to: PHTQAPFHTHSGSSGCLSPRHTR*RVHGAR Trigger: TCGAGCGCCGTGGACGCGTCATCGAGTGTGACGTGG...AGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAAGGGTGCTTGAGTGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | GGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATAGTGCGGTAAGGAGCTaGCAGGGTGGCAGAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: GPTCGAGSQSASELPAGNSAVRS*QGGRRL Trigger: CAGCCTTCTGCCACCCTGGCAGCTCCTTACCGCACT...ATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTGTAGCTGGCCCGGGGTaGGGAGAGGCGGGTACGCTC | + |
Preference number: 4 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSVAGPG*GEAGTL Trigger: GAGCGTACCCGCCTCTCCCCACCCCGGGCCAGCTAC...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACAGCCTCCGCAGCTCGTGGCCATaGAGGGCCTCGATGGCGCGC | + |
Preference number: 4 (lower is better) Translates to: DLDTDQLTVPQDLSLNSLRSSWP*RASMAR Trigger: GCGCGCCATCGAGGCCCTGCATGGCCACGAGCTGCG...GAGGCTGTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | CGGAATGGGCATCGGGCAGGCGACGGTAATCCAGCGAGGACTTTGTCGGCGAGCAGAAGCTGCCTGAGCTaGCATGGGCTGAGTCCGATA | + |
Preference number: 4 (lower is better) Translates to: RNGHRAGDGNPARTLSASRSCLS*HGLSPI Trigger: TATCGGACTCAGCCCATGGCAGCTCAGGCAGCTTCT...GCTCGCCGACAAAGTCCTCGCTGGATTACCGTCGCCTGCCCGATGCCCATTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GGGAGAGGTATGAGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTTCCCATCGTAGGCACTaGCCGGCTGGCCACGGTAGG | + |
Preference number: 4 (lower is better) Translates to: GRGMREGGDNLGLHPTLPSHRRH*PAGHGR Trigger: CCTACCGTGGCCAGCCGGGCAGTGCCTACGATGGGA...AGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACACCACGAGCGCGCGACCTaGACGCAGCTCGTGGCCATG | + |
Preference number: 4 (lower is better) Translates to: PLVARKPFQSPHSSTLPHHERAT*TQLVAM Trigger: CATGGCCACGAGCTGCGTCCAGGTCGCGCGCTCGTG...GTGTGGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | GCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGGTTGGGCCCGGTAGGTaGCTGGCTGGGCCGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: ASLASKKKNAPPDISCRLVGPGR*LAGPSE Trigger: CTCTGACGGCCCAGCCAGCCACCTACCGGGCCCAAC...CAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | TCCAGCGAGGACTTTGTCGGCGAGCGGCGGAACGAAAGCTGCGACTCTGATAAAAACGGCGCAGGGGGCTaGGGTCGCGACCAAAGAATG | + |
Preference number: 4 (lower is better) Translates to: SSEDFVGERRNESCDSDKNGAGG*GRDQRM Trigger: CATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTT...TTTATCAGAGTCGCAGCTTTCGTTCCGCCGCTCGCCGACAAAGTCCTCGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACACACGAGCGCGCGACCTaGACGCAGCTCGTGGCCATG | + |
Preference number: 4 (lower is better) Translates to: VTLSWPPSHLKRKTRRLTHERAT*TQLVAM Trigger: CATGGCCACGAGCTGCGTCCAGGTCGCGCGCTCGTG...TGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGCCAGGAAAGGGTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATCATTGTCTTGTCCCCAGACTaGATAGCCAGGGCAGGCCCC | + |
Preference number: 4 (lower is better) Translates to: LHAALVARVHLSCPQVIIVLSPD*IARAGP Trigger: GGGGCCTGCCCTGGCTATCCAGTCTGGGGACAAGAC...AATGATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GGAACGAAAGCTGCGACTCTGATAAACGGCGGTAATCAGAGAGCTCGGCTAAACGCGGCGGGGTGCTGTTaGCGTTGGCAACGGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: GTKAATLINGGNQRARLNAAGCC*RWQRPP Trigger: AGGGGGCCGTTGCCAACGCCAACAGCACCCCGCCGC...GTTTAGCCGAGCTCTCTGATTACCGCCGTTTATCAGAGTCGCAGCTTTCGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATGCGTTCTCGCGCATGTaGACGAAGGCAAACTGTTTC | + |
Preference number: 4 (lower is better) Translates to: GPTCGAGSQSASELPAGNAFSRM*TKANCF Trigger: GAAACAGTTTGCCTTCGTGCACATGCGCGAGAACGC...ATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | ACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCAGTCACCATCAGCTCGCAGCTCGTGGCCATaGAGGGCCTCGATGGCGCGC | + |
Preference number: 4 (lower is better) Translates to: TPPTWRDRELGLCQSPSARSSWP*RASMAR Trigger: GCGCGCCATCGAGGCCCTGCATGGCCACGAGCTGCG...AGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | AGAACGACGGACGAAAGTAGGGTCCCCAACTTCCCAGGGTGGACGCACCTCATAACCAGTTCCAGGGAATaGTGTGTCCCCAGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: RTTDESRVPNFPGWTHLITSSRE*CVPSPW Trigger: CCAGGGGCTGGGGACACAGCATTCCCTGGAACTGGT...TATGAGGTGCGTCCACCCTGGGAAGTTGGGGACCCTACTTTCGTCCGTCGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTAACGGCGCAGGGGGCTaGGGTCGCGACCAAAGAATG | + |
Preference number: 4 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSNGAGG*GRDQRM Trigger: CATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTT...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GGCCCTACATGCGGCGCTGGTAGCCAGAGTGCATCTGAGCTGCCCGCAGGTAATAGAAGCAGCCTGTTGTaGAGCATATGGGGCAGACTG | + |
Preference number: 4 (lower is better) Translates to: GPTCGAGSQSASELPAGNRSSLL*SIWGRL Trigger: CAGTCTGCCCCATATGCTGCACAACAGGCTGCTTCT...ATTACCTGCGGGCAGCTCAGATGCACTCTGGCTACCAGCGCCGCATGTAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTAGCCCCGTAAGCAGCTaGCGCCCCATAGGAGCCAGT | + |
Preference number: 4 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSSPVSS*RPIGAS Trigger: ACTGGCTCCTATGGGGCGGCAGCTGCTTACGGGGCT...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACAGGCCCGGTAGGTGGCTaGCTGGGCCGTCAGAGGCGC | + |
Preference number: 4 (lower is better) Translates to: KKKNAPPDISCRLYHLQTGPVGG*LGRQRR Trigger: GCGCCTCTGACGGCCCAGCCAGCCACCTACCGGGCC...TGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GGAACGAAAGCTGCGACTCTGATAAACGGCGGTAATCAGAGAGCTCGGCTAAACGTTGGGCCCGGTAGGTaGCTGGCTGGGCCGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: GTKAATLINGGNQRARLNVGPGR*LAGPSE Trigger: CTCTGACGGCCCAGCCAGCCACCTACCGGGCCCAAC...GTTTAGCCGAGCTCTCTGATTACCGCCGTTTATCAGAGTCGCAGCTTTCGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | ATTATAGGAGCCCGAATAGCGTGCGTAATCGGAATGGGCATCGGGCAGGCGACGGGCACTGTAAGAGGCTaGGGGCTGGGCACTGTAAGA | + |
Preference number: 4 (lower is better) Translates to: IIGARIACVIGMGIGQATGTVRG*GLGTVR Trigger: TCTTACAGTGCCCAGCCCTCAGCCTCTTACAGTGCC...CGTCGCCTGCCCGATGCCCATTCCGATTACGCACGCTATTCGGGCTCCTATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
||
CDS-3UTR TCA 90 bp | CCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACACAGACAGGTAGGCTGCTaGTGGCTGGCCTGTCCCATC | + |
Preference number: 4 (lower is better) Translates to: PLVARKPFQSPHSSTLPHRQVGC*WLACPI Trigger: GATGGGACAGGCCAGCCATCAGCAGCCTACCTGTCT...GTGTGGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR TCA 90 bp | AGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACAGACAGGTAGGCTGCTaGTGGCTGGCCTGTCCCATC | + |
Preference number: 4 (lower is better) Translates to: SGDLDTDQLTVPQDLSLNRQVGC*WLACPI Trigger: GATGGGACAGGCCAGCCATCAGCAGCCTACCTGTCT...GTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GGGAGAGGTATGAGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTGCCAAGCGAGGAAGCTaGAGCAGACTGGGAACTAGG | + |
Preference number: 4 (lower is better) Translates to: GRGMREGGDNLGLHPTLPAKRGS*SRLGTR Trigger: CCTAGTTCCCAGTCTGCTGCAGCTTCCTCGCTTGGC...AGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACAAGCCCCGTAAGCAGCTaGCGCCCCATAGGAGCCAGT | + |
Preference number: 4 (lower is better) Translates to: VTLSWPPSHLKRKTRRLTSPVSS*RPIGAS Trigger: ACTGGCTCCTATGGGGCGGCAGCTGCTTACGGGGCT...TGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGCCAGGAAAGGGTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACAGGGATCGTCGTAGCTaGCCCGGGGTGGGGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: LASKKKNAPPDISCRLYHRDRRS*PGVGRG Trigger: GCCTCTCCCCACCCCGGGCCAGCTACGACGATCCCT...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | ACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCCTGGGGCACTGTAAGAGGCTaGGGGCTGGGCACTGTAAGA | + |
Preference number: 4 (lower is better) Translates to: TPTLGLQAAFLLAVTSSWGTVRG*GLGTVR Trigger: TCTTACAGTGCCCAGCCCTCAGCCTCTTACAGTGCC...CCAGGAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | TCCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACAAGTGCGGTAAGGAGCTaGCAGGGTGGCAGAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: SIGRQETIPIPTLKHPSTSAVRS*QGGRRL Trigger: CAGCCTTCTGCCACCCTGGCAGCTCCTTACCGCACT...TGTGGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCATAGGGCGGCGGGGTaGTGTTGGCGTTGGCAACGG | + |
Preference number: 4 (lower is better) Translates to: LASKKKNAPPDISCRLYHHRAAG*CWRWQR Trigger: CCGTTGCCAACGCCAACAGCACCCCGCCGCCCTATG...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GCTCCAGGTAGGCCTAGGGGAGATGCCATTGGGGACAGGGAGGGTATACCAGATCATAGGCAGCAGCTGTaGCTGGTTGTGCCACATAAG | + |
Preference number: 4 (lower is better) Translates to: APGRPRGDAIGDREGIPDHRQQL*LVVPHK Trigger: CTTATGTGGCACAACCAGCCACAGCTGCTGCCTATG...ATCTGGTATACCCTCCCTGTCCCCAATGGCATCTCCCCTAGGCCTACCTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 72 bp | AGGGCAGGGCTCCAGGTAGGCCTAGGGGAGATGCCATaGGGGACAGGGAGGGTATACCAGATTTGTCTCAAA | + |
Preference number: 4 (lower is better) Translates to: RAGLQVGLGEMP*GTGRVYQICLK Trigger: TTTGAGACAAATCTGGTATACCCTCCCTGTCCCCAATGGCATCTCCCCTAGGCCTACCTGGAGCCCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | GGAGGGTATACCAGATTTGTCTCAAACAGTTGGTGTCCCTGTCAGAAGGCTCATCCACGTCACACTCGATaGCGCGTCCACGGCGCTCGA | + |
Preference number: 4 (lower is better) Translates to: GGYTRFVSNSWCPCQKAHPRHTR*RVHGAR Trigger: TCGAGCGCCGTGGACGCGTCATCGAGTGTGACGTGG...ATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | TTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCTCACTTCTTTGCCGTTaGGCTGCGCGATGGCGGCTT | + |
Preference number: 4 (lower is better) Translates to: FHTHSGSSGCLSSSCHVFSLLCR*AARWRL Trigger: AAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGA...GAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | GTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCTTTGCCGTTGAGCTaGGCGATGGCGGCTTTGGCA | + |
Preference number: 4 (lower is better) Translates to: VTLSWPPSHLKRKTRRLTSLPLS*AMAALA Trigger: TGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGA...TGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGCCAGGAAAGGGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | AATTCCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACCAGTTCCAGGGAATaGTGTGTCCCCAGCCCCTGG | + |
Preference number: 4 (lower is better) Translates to: NSIGRQETIPIPTLKHPSTSSRE*CVPSPW Trigger: CCAGGGGCTGGGGACACAGCATTCCCTGGAACTGGT...GGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | ACATCAGTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATGCCAAGCGAGGAAGCTaGAGCAGACTGGGAACTAGG | + |
Preference number: 4 (lower is better) Translates to: TSVVSGDLDTDQLTVPQDAKRGS*SRLGTR Trigger: CCTAGTTCCCAGTCTGCTGCAGCTTCCTCGCTTGGC...ATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | ACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCCTGGCGAAGAAGCTGCAGCTaGCTGACCCCCATAAGTGGA | + |
Preference number: 4 (lower is better) Translates to: TPTLGLQAAFLLAVTSSWRRSCS*LTPISG Trigger: TCCACTTATGGGGGTCAGGCAGCTGCAGCTTCTTCG...CCAGGAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | GTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACAGGCACCATAGGAGGCTaGTTGAGCCCCATAGGAACC | + |
Preference number: 4 (lower is better) Translates to: VTLSWPPSHLKRKTRRLTGTIGG*LSPIGT Trigger: GGTTCCTATGGGGCTCAAGCAGCCTCCTATGGTGCC...TGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGCCAGGAAAGGGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACAAGGCTGATGACTGAGTaGGGTAAGGAGCTGCCAGGG | + |
Preference number: 4 (lower is better) Translates to: VTLSWPPSHLKRKTRRLTRLMTE*GKELPG Trigger: CCCTGGCAGCTCCTTACCGCACTCAGTCATCAGCCT...TGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGCCAGGAAAGGGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | ACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCCTGGCAGCCCCTGGTTTCTTaGTCTTGTCCCCAGACTGGA | + |
Preference number: 4 (lower is better) Translates to: TPTLGLQAAFLLAVTSSWQPLVS*SCPQTG Trigger: TCCAGTCTGGGGACAAGACCAAGAAACCAGGGGCTG...CCAGGAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | ACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCCTGGATGTCACAGCTGACCCCTGTATaGGGCCCCAAGGGAGACAGA | + |
Preference number: 4 (lower is better) Translates to: TLGLQAAFLLAVTSSWMSQLTPV*GPKGDR Trigger: TCTGTCTCCCTTGGGGCCCCATACAGGGGTCAGCTG...TGACATCCAGGAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | GGAACGAAAGCTGCGACTCTGATAAACGGCGGTAATCAGAGAGCTCGGCTAAACCAGCTGACCCCTGTATaGGGCCCCAAGGGAGACAGA | + |
Preference number: 4 (lower is better) Translates to: GTKAATLINGGNQRARLNQLTPV*GPKGDR Trigger: TCTGTCTCCCTTGGGGCCCCATACAGGGGTCAGCTG...GTTTAGCCGAGCTCTCTGATTACCGCCGTTTATCAGAGTCGCAGCTTTCGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | TTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCGAAGCTGCAGCAGACTaGGAACTAGGGCTAGCCAGC | + |
Preference number: 4 (lower is better) Translates to: FHTHSGSSGCLSSSCHVFEAAAD*ELGLAS Trigger: GCTGGCTAGCCCTAGTTCCCAGTCTGCTGCAGCTTC...GAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | CATCAGCTGTCGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAAGTAGCTGGCCCGGGGTaGGGAGAGGCGGGTACGCTC | + |
Preference number: 4 (lower is better) Translates to: HQLSVVSPPNNLKYRAQKVAGPG*GEAGTL Trigger: GAGCGTACCCGCCTCTCCCCACCCCGGGCCAGCTAC...TTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCGACAGCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | GATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACAGCCTCCTTCTGCCCCTTGGTTaGGAGTTCCACGTTGATGCG | + |
Preference number: 4 (lower is better) Translates to: DLDTDQLTVPQDLSLNSLLLPLG*EFHVDA Trigger: CGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAG...GAGGCTGTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACAGCCTCGGCGCTCGAAGAGGCTaGGCAATTCCTGACTTGTAC | + |
Preference number: 4 (lower is better) Translates to: DLDTDQLTVPQDLSLNSLGARRG*AIPDLY Trigger: GTACAAGTCAGGAATTGCGCAGCCTCTTCGAGCGCC...GAGGCTGTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | AGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACGGCGGCTTTGGCATCTaGTTCCTTCTCCATGTGAAC | + |
Preference number: 4 (lower is better) Translates to: SGDLDTDQLTVPQDLSLNGGFGI*FLLHVN Trigger: GTTCACATGGAGAAGGAAGCAGATGCCAAAGCCGCC...GTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GCAGGTAATCATTATAGGAGCCCGAATAGCGTGCGTAATCGGAATGGGCATCGGGCAGGCCCCTTCTTCTaGCCCTTGGTTGAGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: AGNHYRSPNSVRNRNGHRAGPFF*PLVESS Trigger: GGAACTCTCAACCAAGGGGCAGAAGAAGGGGCCTGC...CCGATGCCCATTCCGATTACGCACGCTATTCGGGCTCCTATAATGATTACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACAAGAAGCTGCCTGAGCTaGCATGGGCTGAGTCCGATA | + |
Preference number: 4 (lower is better) Translates to: VTLSWPPSHLKRKTRRLTRSCLS*HGLSPI Trigger: TATCGGACTCAGCCCATGGCAGCTCAGGCAGCTTCT...TGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGCCAGGAAAGGGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | TCCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACAGCTGGTAGTCGAAGGTaGCAGAGAAGCCACCAGTTC | + |
Preference number: 4 (lower is better) Translates to: SIGRQETIPIPTLKHPSTAGSRR*QRSHQF Trigger: GAACTGGTGGCTTCTCTGCCACCTTCGACTACCAGC...TGTGGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | TCCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACACAAAGAATGGTGGTGTaGGCTGACGGGCTTGCCCAT | + |
Preference number: 4 (lower is better) Translates to: SIGRQETIPIPTLKHPSTQRMVV*ADGLAH Trigger: ATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTG...TGTGGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | CTGAGCACTATGCCCCACCTAAATCCCAATGGCCAGAACTGTTCAGACACTCACGAAGCTGCAGCAGACTaGGAACTAGGGCTAGCCAGC | + |
Preference number: 4 (lower is better) Translates to: LSTMPHLNPNGQNCSDTHEAAAD*ELGLAS Trigger: GCTGGCTAGCCCTAGTTCCCAGTCTGCTGCAGCTTC...GTGAGTGTCTGAACAGTTCTGGCCATTGGGATTTAGGTGGGGCATAGTGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGGGCGCCATAAGAGGATaGCTGGTTACCATAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: ASLASKKKNAPPDISCRLGAIRG*LVTIGS Trigger: GCTTCCTATGGTAACCAGCCATCCTCTTATGGCGCC...CAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | AGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACGGCGCCATAAGAGGATaGCTGGTTACCATAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: SGDLDTDQLTVPQDLSLNGAIRG*LVTIGS Trigger: GCTTCCTATGGTAACCAGCCATCCTCTTATGGCGCC...GTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCATAGGCAGCAGCTGTaGCTGGTTGTGCCACATAAG | + |
Preference number: 4 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSHRQQL*LVVPHK Trigger: CTTATGTGGCACAACCAGCCACAGCTGCTGCCTATG...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CCTCTCCTGGGGAAGGCCCACATGATAGAGGGAGGGAATGAAAAGCCACCATTGATAGGAACCAGCCATTaGGGTAGTGGCTTGTGCAGC | + |
Preference number: 4 (lower is better) Translates to: PLLGKAHMIEGGNEKPPLIGTSH*GSGLCS Trigger: GCTGCACAAGCCACTACCCCAATGGCTGGTTCCTAT...CAATGGTGGCTTTTCATTCCCTCCCTCTATCATGTGGGCCTTCCCCAGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGCTGGGTCTGAACAACTaGTTGAGCCCCATAGGAACC | + |
Preference number: 4 (lower is better) Translates to: ASLASKKKNAPPDISCRLLGLNN*LSPIGT Trigger: GGTTCCTATGGGGCTCAACCAGTTGTTCAGACCCAG...CAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | AGGATCCTTCAGACAGTGGGAAAAATCTATGAGCCAATCCTGCAAAATGTGGCTAGGGATCGTCGTAGCTaGCCCGGGGTGGGGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: RILQTVGKIYEPILQNVARDRRS*PGVGRG Trigger: GCCTCTCCCCACCCCGGGCCAGCTACGACGATCCCT...AGCCACATTTTGCAGGATTGGCTCATAGATTTTTCCCACTGTCTGAAGGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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3UTR CAA 72 bp | GTCCCCAACTTCCCAGGGTGGACGCACCTCATAAGCTaGCCTTCAGCCAGTGAGTGCCAAAAGGACTACTTT | + |
Preference number: 4 (lower is better) Translates to: VPNFPGWTHLIS*PSASECQKDYF Trigger: AAAGTAGTCCTTTTGGCACTCACTGGCTGAAGGCAAGCTTATGAGGTGCGTCCACCCTGGGAAGTTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | CCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCACACTTGAGAGTTCCACGTTaGTGCGCTTGCCCTTCACTT | + |
Preference number: 4 (lower is better) Translates to: PLVARKPFQSPHSSTLPHLRVPR*CACPSL Trigger: AAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAA...GTGTGGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR TCA 90 bp | CTTTCTTCTAGCTGTCACGTCTTCCTGGATGTCAAACTGGCTCACCTGACAGTGAATGGTGGTGTGGGCTaGCGGGCTTGCCCATCAAAG | + |
Preference number: 4 (lower is better) Translates to: LSSSCHVFLDVKLAHLTVNGGVG*RACPSK Trigger: CTTTGATGGGCAAGCCCGTCAGCCCACACCACCATT...CACTGTCAGGTGAGCCAGTTTGACATCCAGGAAGACGTGACAGCTAGAAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR TCA 90 bp | ATCATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACGCCGCAGCAGCAGACTaGGCTCCATATGAGCCTGAC | + |
Preference number: 4 (lower is better) Translates to: IILSRSRNQPGFFRSVGNAAAAD*APYEPD Trigger: GTCAGGCTCATATGGAGCTCAGTCTGCTGCTGCGGC...GTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | CATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACCAGGCACCATAGGAGGCTaGTTGAGCCCCATAGGAACC | + |
Preference number: 4 (lower is better) Translates to: HTIQVKEPTWVLQVSGKPGTIGG*LSPIGT Trigger: GGTTCCTATGGGGCTCAAGCAGCCTCCTATGGTGCC...TGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | TTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCAGAAGCAGCCTGTTGTaGAGCATATGGGGCAGACTG | + |
Preference number: 4 (lower is better) Translates to: FHTHSGSSGCLSSSCHVFRSSLL*SIWGRL Trigger: CAGTCTGCCCCATATGCTGCACAACAGGCTGCTTCT...GAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | CATCAGCTGTCGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATCCCATCGTAGGCACTaGCCGGCTGGCCACGGTAGG | + |
Preference number: 4 (lower is better) Translates to: HQLSVVSPPNNLKYRAQKSHRRH*PAGHGR Trigger: CCTACCGTGGCCAGCCGGGCAGTGCCTACGATGGGA...TTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCGACAGCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | AGGATCCTTCAGACAGTGGGAAAAATCTATGAGCCAATCCTGCAAAATGTGGCTCATAGGGCGGCGGGGTaGTGTTGGCGTTGGCAACGG | + |
Preference number: 4 (lower is better) Translates to: RILQTVGKIYEPILQNVAHRAAG*CWRWQR Trigger: CCGTTGCCAACGCCAACAGCACCCCGCCGCCCTATG...AGCCACATTTTGCAGGATTGGCTCATAGATTTTTCCCACTGTCTGAAGGATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CAGTCACCATCAGCTAAAACATCAGTGGTAAGCGGGGATTTGGACACGGACCAAGCGACCAAAGAATGGTaGTGTGGGCTGACGGGCTTG | + |
Preference number: 4 (lower is better) Translates to: QSPSAKTSVVSGDLDTDQATKEW*CGLTGL Trigger: CAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGC...TTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGATGGTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | ACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCAGTCACCATCAGCTCCTGACCCCCATAAGTaGAAAGGGCTGAGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: TPPTWRDRELGLCQSPSAPDPHK*KGLRLR Trigger: CCTCAGCCTCAGCCCTTTCCACTTATGGGGGTCAGG...AGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | TGCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTGGGTGCTGTTGGCGTTaGCAACGGCCCCCTGGGACA | + |
Preference number: 4 (lower is better) Translates to: CNQDNDNQVSKPRIAPSFGCCWR*QRPPGT Trigger: TGTCCCAGGGGGCCGTTGCCAACGCCAACAGCACCC...AAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | GTGCCAAAAGGACTACTTTCTTTCACATCCATCCCACCAAAACCAGAACAAAGGGGGTGCTGTTGGCGTTaGCAACGGCCCCCTGGGACA | + |
Preference number: 4 (lower is better) Translates to: VPKGLLSFTSIPPKPEQRGCCWR*QRPPGT Trigger: TGTCCCAGGGGGCCGTTGCCAACGCCAACAGCACCC...CCTTTGTTCTGGTTTTGGTGGGATGGATGTGAAAGAAAGTAGTCCTTTTGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCGCGGCGGGGTGCTGTTaGCGTTGGCAACGGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: ELRFLTPPTWRDRELGLCAAGCC*RWQRPP Trigger: AGGGGGCCGTTGCCAACGCCAACAGCACCCCGCCGC...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 72 bp | GGAGATGCCATTGGGGACAGGGAGGGTATACCAGATTaGTCTCAAACAGTTGGTGTCCCTGTCAGAAGGCTC | + |
Preference number: 4 (lower is better) Translates to: GDAIGDREGIPD*SQTVGVPVRRL Trigger: GAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCCCCAATGGCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | TTCCCACTCATGGGCCCTGCACAAAAAGACCTTGGTTTATCAACAGAACGACGGCTTCTGCCCCTTGGTTaGGAGTTCCACGTTGATGCG | + |
Preference number: 4 (lower is better) Translates to: FPLMGPAQKDLGLSTERRLLPLG*EFHVDA Trigger: CGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAG...CCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GGCACAGAGGAAATAGCTAAAGTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAGCAGGCCCCTTCTTCTaGCCCTTGGTTGAGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: GTEEIAKVTLSWPPSHLKAGPFF*PLVESS Trigger: GGAACTCTCAACCAAGGGGCAGAAGAAGGGGCCTGC...TTTTAGATGCGAGGGAGGCCAGGAAAGGGTTACTTTAGCTATTTCCTCTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | AATTCCATTGGTCGCCAGGAAACCATTCCAATCCCCACACTCAAGCACCCTTCCAGCCACCAGTGCTGTTaGCAAAAGCCTGCTGGTAGT | + |
Preference number: 4 (lower is better) Translates to: NSIGRQETIPIPTLKHPSSHQCC*QKPAGS Trigger: ACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCT...GGAAGGGTGCTTGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | ATCATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACAGGCTGATGACTGAGTaGGGTAAGGAGCTGCCAGGG | + |
Preference number: 4 (lower is better) Translates to: IILSRSRNQPGFFRSVGNRLMTE*GKELPG Trigger: CCCTGGCAGCTCCTTACCGCACTCAGTCATCAGCCT...GTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | TCAGCTAAAACATCAGTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCAAAGAATGGTGGTGTaGGCTGACGGGCTTGCCCAT | + |
Preference number: 4 (lower is better) Translates to: SAKTSVVSGDLDTDQLTVQRMVV*ADGLAH Trigger: ATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTG...GACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACAGCGACCAAAGAATGGTaGTGTGGGCTGACGGGCTTG | + |
Preference number: 4 (lower is better) Translates to: KKKNAPPDISCRLYHLQTATKEW*CGLTGL Trigger: CAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGC...TGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACTGCCTGAGCTGCCATaGGCTGAGTCCGATAGCCAA | + |
Preference number: 4 (lower is better) Translates to: LKRKTRRLTSAVGCITSKLPELP*AESDSQ Trigger: TTGGCTATCGGACTCAGCCCATGGCAGCTCAGGCAG...TTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | ACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCAGTCACCATCAGCTAGGCTGCGCAATTCCTaGCTTGTACATGCAGCCGAT | + |
Preference number: 4 (lower is better) Translates to: TPPTWRDRELGLCQSPSARLRNS*LVHAAD Trigger: ATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCT...AGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | CCCACTCATGGGCCCTGCACAAAAAGACCTTGGTTTATCAACAGAACGACGGACTTGAGAGTTCCACGTTaGTGCGCTTGCCCTTCACTT | + |
Preference number: 4 (lower is better) Translates to: PTHGPCTKRPWFINRTTDLRVPR*CACPSL Trigger: AAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAA...GTCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | GCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGGGAACCATACCTTTTTaGCATGGCGACAGCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: ASLASKKKNAPPDISCRLGTIPF*HGDSLF Trigger: AAAAAGGCTGTCGCCATGTCAAAAAGGTATGGTTCC...CAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACGGCGGCTTTGGCATCTaGTTCCTTCTCCATGTGAAC | + |
Preference number: 4 (lower is better) Translates to: LASKKKNAPPDISCRLYHGGFGI*FLLHVN Trigger: GTTCACATGGAGAAGGAAGCAGATGCCAAAGCCGCC...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | CATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACCAAGCCACCAGTGCTGTTaGCAAAAGCCTGCTGGTAGT | + |
Preference number: 4 (lower is better) Translates to: HTIQVKEPTWVLQVSGKPSHQCC*QKPAGS Trigger: ACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCT...TGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACACGAAGAAGCTGCAGCTaGCTGACCCCCATAAGTGGA | + |
Preference number: 4 (lower is better) Translates to: KKKNAPPDISCRLYHLQTRRSCS*LTPISG Trigger: TCCACTTATGGGGGTCAGGCAGCTGCAGCTTCTTCG...TGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CCAGTGAGTGCCAAAAGGACTACTTTCTTTCACATCCATCCCACCAAAACCAGACCTGACCCCCATAAGTaGAAAGGGCTGAGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: PVSAKRTTFFHIHPTKTRPDPHK*KGLRLR Trigger: CCTCAGCCTCAGCCCTTTCCACTTATGGGGGTCAGG...TCTGGTTTTGGTGGGATGGATGTGAAAGAAAGTAGTCCTTTTGGCACTCACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CAGTCACCATCAGCTAAAACATCAGTGGTAAGCGGGGATTTGGACACGGACCAAATAGGAACCAGCCATTaGGGTAGTGGCTTGTGCAGC | + |
Preference number: 4 (lower is better) Translates to: QSPSAKTSVVSGDLDTDQIGTSH*GSGLCS Trigger: GCTGCACAAGCCACTACCCCAATGGCTGGTTCCTAT...TTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGATGGTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 72 bp | TCACCATCAGCTAAAACATCAGTGGTAAGCGGGGATTaGGACACGGACCAACTGACTGTCCCACAGGATCTC | + |
Preference number: 4 (lower is better) Translates to: SPSAKTSVVSGD*DTDQLTVPQDL Trigger: GAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGATGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | GGAGGGTATACCAGATTTGTCTCAAACAGTTGGTGTCCCTGTCAGAAGGCTCATAGGCTGCGCAATTCCTaGCTTGTACATGCAGCCGAT | + |
Preference number: 4 (lower is better) Translates to: GGYTRFVSNSWCPCQKAHRLRNS*LVHAAD Trigger: ATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCT...ATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | GATGGCATGCTATTTAAGATGAGCTTAATTCCATTGGTCGCCAGGAAACCATTCGCCGCAGCAGCAGACTaGGCTCCATATGAGCCTGAC | + |
Preference number: 4 (lower is better) Translates to: DGMLFKMSLIPLVARKPFAAAAD*APYEPD Trigger: GTCAGGCTCATATGGAGCTCAGTCTGCTGCTGCGGC...GAATGGTTTCCTGGCGACCAATGGAATTAAGCTCATCTTAAATAGCATGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | GCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTATCTTTGCCGTTGAGCTaGGCGATGGCGGCTTTGGCA | + |
Preference number: 4 (lower is better) Translates to: AIKTMTTRFPNHESPQVLSLPLS*AMAALA Trigger: TGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGA...TAAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCATCAAAGCCACCAGTaGTGTTGCCAAAAGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: LASKKKNAPPDISCRLYHHQSHQ*CCQKPA Trigger: AGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATG...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTAAGCACGGTAAGAAGCTaGCTGAGCTGCCATGGGCTG | + |
Preference number: 4 (lower is better) Translates to: AIKTMTTRFPNHESPQVLSTVRS*LSCHGL Trigger: CAGCCCATGGCAGCTCAGGCAGCTTCTTACCGTGCT...TAAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACATTAAGCGAAGAAGCTaGAGCTGCCTGACCCCCATA | + |
Preference number: 4 (lower is better) Translates to: LASKKKNAPPDISCRLYHIKRRS*SCLTPI Trigger: TATGGGGGTCAGGCAGCTGCAGCTTCTTCGCTTAAT...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | ACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCAGTCACCATCAGCTATTAAGCGAAGAAGCTaGAGCTGCCTGACCCCCATA | + |
Preference number: 4 (lower is better) Translates to: TPPTWRDRELGLCQSPSAIKRRS*SCLTPI Trigger: TATGGGGGTCAGGCAGCTGCAGCTTCTTCGCTTAAT...AGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | TGCAATCAAGACAATGACAACCAGGTTTCCAAACCACGAATCGCCCCAAGTTTTCGGCGGAACGAAAGCTaGGACTCTGATAAACGGCGG | + |
Preference number: 4 (lower is better) Translates to: CNQDNDNQVSKPRIAPSFRRNES*DSDKRR Trigger: CCGCCGTTTATCAGAGTCGCAGCTTTCGTTCCGCCG...AAAACTTGGGGCGATTCGTGGTTTGGAAACCTGGTTGTCATTGTCTTGATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCGTCTTGTCCCCAGACTaGATAGCCAGGGCAGGCCCC | + |
Preference number: 4 (lower is better) Translates to: ELRFLTPPTWRDRELGLCVLSPD*IARAGP Trigger: GGGGCCTGCCCTGGCTATCCAGTCTGGGGACAAGAC...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR TCA 90 bp | CGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATAAAAGGGAGAATGGTGGTGTGGGCTaGCGGGCTTGCCCATCAAAG | + |
Preference number: 4 (lower is better) Translates to: RLYHLQTTLSIAHKNKRENGGVG*RACPSK Trigger: CTTTGATGGGCAAGCCCGTCAGCCCACACCACCATT...CTCCCTTTTATTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | AGGATCCTTCAGACAGTGGGAAAAATCTATGAGCCAATCCTGCAAAATGTGGCTGCTGGTAGTCGAAGGTaGCAGAGAAGCCACCAGTTC | + |
Preference number: 4 (lower is better) Translates to: RILQTVGKIYEPILQNVAAGSRR*QRSHQF Trigger: GAACTGGTGGCTTCTCTGCCACCTTCGACTACCAGC...AGCCACATTTTGCAGGATTGGCTCATAGATTTTTCCCACTGTCTGAAGGATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | CGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATAAAAGGGAGCTGCCTGAGCTGCCATaGGCTGAGTCCGATAGCCAA | + |
Preference number: 4 (lower is better) Translates to: RLYHLQTTLSIAHKNKRELPELP*AESDSQ Trigger: TTGGCTATCGGACTCAGCCCATGGCAGCTCAGGCAG...CTCCCTTTTATTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GATGGCATGCTATTTAAGATGAGCTTAATTCCATTGGTCGCCAGGAAACCATTCCTGGACTCCACCATATaGGCCAAGCGAGGAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: DGMLFKMSLIPLVARKPFLDSTI*AKRGSC Trigger: GCAGCTTCCTCGCTTGGCCCATATGGTGGAGTCCAG...GAATGGTTTCCTGGCGACCAATGGAATTAAGCTCATCTTAAATAGCATGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CCA 90 bp | CGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATAAAAGGGAGCTGGACTCCACCATATaGGCCAAGCGAGGAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: RLYHLQTTLSIAHKNKRELDSTI*AKRGSC Trigger: GCAGCTTCCTCGCTTGGCCCATATGGTGGAGTCCAG...CTCCCTTTTATTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 72 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTaGTATCACCTCCAAACAACCTTAAGTATCGCGCAC | + |
Preference number: 4 (lower is better) Translates to: KKKNAPPDISCR*YHLQTTLSIAH Trigger: GTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 72 bp | GGGACAGGGAGGGTATACCAGATTTGTCTCAAACAGTaGGTGTCCCTGTCAGAAGGCTCATCATACTATCCA | + |
Preference number: 4 (lower is better) Translates to: GTGRVYQICLKQ*VSLSEGSSYYP Trigger: TGGATAGTATGATGAGCCTTCTGACAGGGACACCAACTGTTTGAGACAAATCTGGTATACCCTCCCTGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | CATCAGCTGTCGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAAGCGTTCTCGCGCATGTaGACGAAGGCAAACTGTTTC | + |
Preference number: 4 (lower is better) Translates to: HQLSVVSPPNNLKYRAQKAFSRM*TKANCF Trigger: GAAACAGTTTGCCTTCGTGCACATGCGCGAGAACGC...TTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCGACAGCTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | GTCCAACCACTTGATCTGAACTCTCTAGTCCCAAAGATGGCATGCTATTTAAGAGGAGCCCGAATAGCGTaGGTAATCGGAATGGGCATC | + |
Preference number: 4 (lower is better) Translates to: VQPLDLNSLVPKMACYLRGARIA*VIGMGI Trigger: GATGCCCATTCCGATTACGCACGCTATTCGGGCTCC...TCTTAAATAGCATGCCATCTTTGGGACTAGAGAGTTCAGATCAAGTGGTTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | TCAGCTAAAACATCAGTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCAGAGTGCATCTGAGCTaGCCGCAGGTAATCATTATA | + |
Preference number: 4 (lower is better) Translates to: SAKTSVVSGDLDTDQLTVRVHLS*PQVIII Trigger: TATAATGATTACCTGCGGGCAGCTCAGATGCACTCT...GACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR TCA 90 bp | CATACTATCCAGGTCAAGGAACCAACCTGGGTTCTTCAGGTCAGTGGGAAACCACATACAGTACCTTTTTaGCATGGCGACAGCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: HTIQVKEPTWVLQVSGKPHTVPF*HGDSLF Trigger: AAAAAGGCTGTCGCCATGTCAAAAAGGTACTGTATG...TGGTTTCCCACTGACCTGAAGAACCCAGGTTGGTTCCTTGACCTGGATAGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | CATCAGCTGTCGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAACATCAAAGCCACCAGTaGTGTTGCCAAAAGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: HQLSVVSPPNNLKYRAQKHQSHQ*CCQKPA Trigger: AGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATG...TTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCGACAGCTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR GCA 90 bp | CATCAGCTGTCGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATTCCTGACTTGTACATaGAGCCGATACATTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: HQLSVVSPPNNLKYRAQKFLTCT*SRYIAH Trigger: GTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAA...TTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCGACAGCTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCTGTTGTGCAGCATATaGGGCAGACTGGGCACTGTA | + |
Preference number: 4 (lower is better) Translates to: ELRFLTPPTWRDRELGLCLLCSI*GRLGTV Trigger: TACAGTGCCCAGTCTGCCCCATATGCTGCACAACAG...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCTGGGTCTGAACAACTaGTTGAGCCCCATAGGAACC | + |
Preference number: 4 (lower is better) Translates to: ELRFLTPPTWRDRELGLCLGLNN*LSPIGT Trigger: GGTTCCTATGGGGCTCAACCAGTTGTTCAGACCCAG...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 72 bp | AGATTTCTAACACCACCTACTTGGAGAGATAGGGAATaGGGACTATGCCAGTCACCATCAGCTAAAACATCA | + |
Preference number: 4 (lower is better) Translates to: RFLTPPTWRDRE*GLCQSPSAKTS Trigger: TGATGTTTTAGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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3UTR CAA 72 bp | AAAGATGGCATGCTATTTAAGATGAGCTTAATTCCATaGGTCGCCAGGAAACCATTCCAATCCCCACACTCA | + |
Preference number: 4 (lower is better) Translates to: KDGMLFKMSLIP*VARKPFQSPHS Trigger: TGAGTGTGGGGATTGGAATGGTTTCCTGGCGACCAATGGAATTAAGCTCATCTTAAATAGCATGCCATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR GCA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCATGCAGCCGATACATTaGCCACGAAAATCTTCCAAG | + |
Preference number: 4 (lower is better) Translates to: ELRFLTPPTWRDRELGLCMQPIH*PRKSSK Trigger: CTTGGAAGATTTTCGTGGGCAATGTATCGGCTGCAT...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 90 bp | CGAGCGCGCGACCTGGACGCAGCTCGTGGCCATGCAGGGCCTCGATaGCGCGCACCGCGCCAGCGTTCTCGCGCATGTGCACGAAGGCAA | + |
Preference number: 5 (lower is better) Translates to: RARDLDAARGHAGPR*RAPRQRSRACARRQ Trigger: TTGCCTTCGTGCACATGCGCGAGAACGCTGGCGCGGTGCGCGCCATCGAGGCCCTGCATGGCCACGAGCTGCGTCCAGGTCGCGCGCTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS TCA 90 bp | GGCTGGCTGGGCCGTCAGAGGCGCCACATAAGAGGCTCGAGGAGGTaGACGGCGCAGGGGGCTGCGGTCGCGACCAAAGAATGGTGGTGT | + |
Preference number: 5 (lower is better) Translates to: GWLGRQRRHIRGSRR*TAQGAAVATKEWWC Trigger: ACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTTCACCTCCTCGAGCCTCTTATGTGGCGCCTCTGACGGCCCAGCCAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 90 bp | CAAAGAGGCGGAAGGCTGGGCCCTATATGCAGCTCCCAGAGACACTaGGGGTTGGGCCCGGTAGGTGGCTGGCTGGGCCGTCAGAGGCGC | + |
Preference number: 5 (lower is better) Translates to: QRGGRLGPICSSQRH*GLGPVGGWLGRQRR Trigger: GCGCCTCTGACGGCCCAGCCAGCCACCTACCGGGCCCAACCCTCAGTGTCTCTGGGAGCTGCATATAGGGCCCAGCCTTCCGCCTCTTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 90 bp | GTTGGCGTTGGCAACGGCCCCCTGGGACATAGACAGGTAGGCTGCTaGTGGCTGGCCTGTCCCATCGTAGGCACTGCCCGGCTGGCCACG | + |
Preference number: 5 (lower is better) Translates to: VGVGNGPLGHRQVGC*WLACPIVGTARLAT Trigger: CGTGGCCAGCCGGGCAGTGCCTACGATGGGACAGGCCAGCCATCAGCAGCCTACCTGTCTATGTCCCAGGGGGCCGTTGCCAACGCCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | GAGGCGCCACATAAGAGGCTCGAGGAGGTGAACGGCGCAGGGGGCTaGGGTCGCGACCAAAGAATGGTGGTGTGGGCTGACGGGCTTGCC | + |
Preference number: 5 (lower is better) Translates to: EAPHKRLEEVNGAGG*GRDQRMVVWADGLA Trigger: GGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTTCACCTCCTCGAGCCTCTTATGTGGCGCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | GTAAGGAGCTGCCAGGGTGGCAGAAGGCTGAGCCCCGTAAGCAGCTaGCGCCCCATAGGAGCCAGTGGCCGCAGCAGCAGACTGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: VRSCQGGRRLSPVSS*RPIGASGRSSRLSS Trigger: GGAGCTCAGTCTGCTGCTGCGGCCACTGGCTCCTATGGGGCGGCAGCTGCTTACGGGGCTCAGCCTTCTGCCACCCTGGCAGCTCCTTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 90 bp | CGGCGCAGGGGGCTGCGGTCGCGACCAAAGAATGGTGGTGTGGGCTaGCGGGCTTGCCCATCAAAGCCACCAGTGCTGTTGCCAAAAGCC | + |
Preference number: 5 (lower is better) Translates to: RRRGLRSRPKNGGVG*RACPSKPPVLLPKA Trigger: GGCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | TGCAGGGCCTCGATGGCGCGCACCGCGCCAGCGTTCTCGCGCATGTaGACGAAGGCAAACTGTTTCATGACGGCGCAGCTCATGACCGTG | + |
Preference number: 5 (lower is better) Translates to: CRASMARTAPAFSRM*TKANCFMTAQLMTV Trigger: CACGGTCATGAGCTGCGCCGTCATGAAACAGTTTGCCTTCGTGCACATGCGCGAGAACGCTGGCGCGGTGCGCGCCATCGAGGCCCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS CCA 90 bp | CCCTATATGCAGCTCCCAGAGACACTGAGGGTTGGGCCCGGTAGGTaGCTGGCTGGGCCGTCAGAGGCGCCACATAAGAGGCTCGAGGAG | + |
Preference number: 5 (lower is better) Translates to: PYMQLPETLRVGPGR*LAGPSEAPHKRLEE Trigger: CTCCTCGAGCCTCTTATGTGGCGCCTCTGACGGCCCAGCCAGCCACCTACCGGGCCCAACCCTCAGTGTCTCTGGGAGCTGCATATAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | CATGACGGCGCAGCTCATGACCGTGCCATAGGGCGCGAAGAGAGCTaGCAACTCCTCCGGTGTCGTATCCGCCCCATCGACATTGCCCAC | + |
Preference number: 5 (lower is better) Translates to: HDGAAHDRAIGREES*QLLRCRIRPIDIAH Trigger: GTGGGCAATGTCGATGGGGCGGATACGACACCGGAGGAGTTGGCAGCTCTCTTCGCGCCCTATGGCACGGTCATGAGCTGCGCCGTCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS CCA 90 bp | GTGAACGGCGCAGGGGGCTGCGGTCGCGACCAAAGAATGGTGGTGTaGGCTGACGGGCTTGCCCATCAAAGCCACCAGTGCTGTTGCCAA | + |
Preference number: 5 (lower is better) Translates to: VNGAGGCGRDQRMVV*ADGLAHQSHQCCCQ Trigger: TTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 90 bp | CAGCCAATGAGGCTGATGACTGAGTGCGGTAAGGAGCTGCCAGGGTaGCAGAAGGCTGAGCCCCGTAAGCAGCTGCCGCCCCATAGGAGC | + |
Preference number: 5 (lower is better) Translates to: QPMRLMTECGKELPG*QKAEPRKQLPPHRS Trigger: GCTCCTATGGGGCGGCAGCTGCTTACGGGGCTCAGCCTTCTGCCACCCTGGCAGCTCCTTACCGCACTCAGTCATCAGCCTCATTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CGGAATGGGCATCGGGCAGGCGACGGTAATCCAGCGAGGACTTTGTCGGCGAGCTGTGGGCTGACGGGCTaGCCCATCAAAGCCACCAGT | + |
Preference number: 5 (lower is better) Translates to: RNGHRAGDGNPARTLSASCGLTG*PIKATS Trigger: ACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACA...GCTCGCCGACAAAGTCCTCGCTGGATTACCGTCGCCTGCCCGATGCCCATTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS CCA 90 bp | AGCTGCAGCAGACTGGGAACTAGGGCTAGCCAGCTGACCCCTGTATaGGGCCCCAAGGGAGACAGAGGGCTGAGCACGGTAAGAAGCTGC | + |
Preference number: 5 (lower is better) Translates to: SCSRLGTRASQLTPV*GPKGDRGLSTVRSC Trigger: GCAGCTTCTTACCGTGCTCAGCCCTCTGTCTCCCTTGGGGCCCCATACAGGGGTCAGCTGGCTAGCCCTAGTTCCCAGTCTGCTGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | CCCAAGGGAGACAGAGGGCTGAGCACGGTAAGAAGCTGCCTGAGCTaGCATGGGCTGAGTCCGATAGCCAACACCCAAAGAGGCGGAAGG | + |
Preference number: 5 (lower is better) Translates to: PKGDRGLSTVRSCLS*HGLSPIANTQRGGR Trigger: CCTTCCGCCTCTTTGGGTGTTGGCTATCGGACTCAGCCCATGGCAGCTCAGGCAGCTTCTTACCGTGCTCAGCCCTCTGTCTCCCTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | GCTGCTGGGCAGCATAGGAAGCAGCCAATGAGGCTGATGACTGAGTaGGGTAAGGAGCTGCCAGGGTGGCAGAAGGCTGAGCCCCGTAAG | + |
Preference number: 5 (lower is better) Translates to: AAGQHRKQPMRLMTE*GKELPGWQKAEPRK Trigger: CTTACGGGGCTCAGCCTTCTGCCACCCTGGCAGCTCCTTACCGCACTCAGTCATCAGCCTCATTGGCTGCTTCCTATGCTGCCCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | TGCCTTTCTTCTAGCTGTCACGTCTTCCTGGATGTCAAACTGGCTCACCTGACAGGCGGCGGGGTGCTGTaGGCGTTGGCAACGGCCCCC | + |
Preference number: 5 (lower is better) Translates to: CLSSSCHVFLDVKLAHLTGGGVL*ALATAP Trigger: GGGGGCCGTTGCCAACGCCAACAGCACCCCGCCGCC...TGTCAGGTGAGCCAGTTTGACATCCAGGAAGACGTGACAGCTAGAAGAAAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACGGCGGCGGGGTGCTGTaGGCGTTGGCAACGGCCCCC | + |
Preference number: 5 (lower is better) Translates to: LASKKKNAPPDISCRLYHGGGVL*ALATAP Trigger: GGGGGCCGTTGCCAACGCCAACAGCACCCCGCCGCC...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | GTGGTGTGGGCTGACGGGCTTGCCCATCAAAGCCACCAGTGCTGTTaGCAAAAGCCTGCTGGTAGTCGAAGGTGGCAGAGAAGCCACCAG | + |
Preference number: 5 (lower is better) Translates to: VVWADGLAHQSHQCC*QKPAGSRRWQRSHQ Trigger: CTGGTGGCTTCTCTGCCACCTTCGACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | GTATGGGGCCCCAAGGGAGACAGAGGGCTGAGCACGGTAAGAAGCTaGCTGAGCTGCCATGGGCTGAGTCCGATAGCCAACACCCAAAGA | + |
Preference number: 5 (lower is better) Translates to: VWGPKGDRGLSTVRS*LSCHGLSPIANTQR Trigger: TCTTTGGGTGTTGGCTATCGGACTCAGCCCATGGCAGCTCAGGCAGCTTCTTACCGTGCTCAGCCCTCTGTCTCCCTTGGGGCCCCATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 90 bp | CGCACGAACCCCATACGAAGAGGCAGCCTGGGCGCCATAAGAGGATaGCTGGTTACCATAGGAAGCAAGGGAGGAGCCCTGAGCCCCATA | + |
Preference number: 5 (lower is better) Translates to: RTNPIRRGSLGAIRG*LVTIGSKGGALSPI Trigger: TATGGGGCTCAGGGCTCCTCCCTTGCTTCCTATGGTAACCAGCCATCCTCTTATGGCGCCCAGGCTGCCTCTTCGTATGGGGTTCGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GGAACGAAAGCTGCGACTCTGATAAACGGCGGTAATCAGAGAGCTCGGCTAAACGGGGTGCTGTTGGCGTaGGCAACGGCCCCCTGGGAC | + |
Preference number: 5 (lower is better) Translates to: GTKAATLINGGNQRARLNGVLLA*ATAPWD Trigger: GTCCCAGGGGGCCGTTGCCAACGCCAACAGCACCCC...GTTTAGCCGAGCTCTCTGATTACCGCCGTTTATCAGAGTCGCAGCTTTCGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS GCA 90 bp | AACTGGTTGAGCCCCATAGGAACCAGCCATTGGGGTAGTGGCTTGTaGAGCATAGGCAGCTGGCTGGCTAGCATAGGCAGCAGCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: NWLSPIGTSHWGSGL*SIGSWLASIGSSCG Trigger: GCCACAGCTGCTGCCTATGCTAGCCAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTATGGGGCTCAACCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 90 bp | CAAAGCCACCAGTGCTGTTGCCAAAAGCCTGCTGGTAGTCGAAGGTaGCAGAGAAGCCACCAGTTCCAGGGAATGCTGTGTCCCCAGCCC | + |
Preference number: 5 (lower is better) Translates to: QSHQCCCQKPAGSRR*QRSHQFQGMLCPQP Trigger: GGGCTGGGGACACAGCATTCCCTGGAACTGGTGGCTTCTCTGCCACCTTCGACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 90 bp | CCCAGACTGGATAGCCAGGGCAGGCCCCTTCTTCTGCCCCTTGGTTaGGAGTTCCACGTTGATGCGCTTGCCCTTCACTTCTTTGCCGTT | + |
Preference number: 5 (lower is better) Translates to: PRLDSQGRPLLLPLG*EFHVDALALHFFAV Trigger: AACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGGGCCTGCCCTGGCTATCCAGTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | AGAATGGTGGTGTGGGCTGACGGGCTTGCCCATCAAAGCCACCAGTaGTGTTGCCAAAAGCCTGCTGGTAGTCGAAGGTGGCAGAGAAGC | + |
Preference number: 5 (lower is better) Translates to: RMVVWADGLAHQSHQ*CCQKPAGSRRWQRS Trigger: GCTTCTCTGCCACCTTCGACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GCTCCAGGTAGGCCTAGGGGAGATGCCATTGGGGACAGGGAGGGTATACCAGATTTGCCCTTCACTTCTTaGCCGTTGAGCTGCGCGATG | + |
Preference number: 5 (lower is better) Translates to: APGRPRGDAIGDREGIPDLPFTS*PLSCAM Trigger: CATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAA...ATCTGGTATACCCTCCCTGTCCCCAATGGCATCTCCCCTAGGCCTACCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | TCCAGCGAGGACTTTGTCGGCGAGCGGCGGAACGAAAGCTGCGACTCTGATAAAAGCAGCTGTGGCTGGTaGTGCCACATAAGCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: SSEDFVGERRNESCDSDKSSCGW*CHISSR Trigger: CCTGCTGCTTATGTGGCACAACCAGCCACAGCTGCT...TTTATCAGAGTCGCAGCTTTCGTTCCGCCGCTCGCCGACAAAGTCCTCGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GGGAGAGGTATGAGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTCATTGGGGTAGTGGCTaGTGCAGCATAGGCAGCTGG | + |
Preference number: 5 (lower is better) Translates to: GRGMREGGDNLGLHPTLPHWGSG*CSIGSW Trigger: CCAGCTGCCTATGCTGCACAAGCCACTACCCCAATG...AGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 90 bp | ATAGGAACCAGCCATTGGGGTAGTGGCTTGTGCAGCATAGGCAGCTaGCTGGCTAGCATAGGCAGCAGCTGTGGCTGGTTGTGCCACATA | + |
Preference number: 5 (lower is better) Translates to: IGTSHWGSGLCSIGS*LASIGSSCGWLCHI Trigger: TATGTGGCACAACCAGCCACAGCTGCTGCCTATGCTAGCCAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 90 bp | CAGCTGGGTCTGAACAACTGGTTGAGCCCCATAGGAACCAGCCATTaGGGTAGTGGCTTGTGCAGCATAGGCAGCTGGCTGGCTAGCATA | + |
Preference number: 5 (lower is better) Translates to: QLGLNNWLSPIGTSH*GSGLCSIGSWLASI Trigger: TATGCTAGCCAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTATGGGGCTCAACCAGTTGTTCAGACCCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | TTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCTGCGCGATGGCGGCTTaGGCATCTGCTTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: FHTHSGSSGCLSSSCHVFCAMAA*ASASFS Trigger: GGAGAAGGAAGCAGATGCCAAAGCCGCCATCGCGCA...GAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | CCCCACACTCAAGCACCCTTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTGTTGAGAGTTCCACGTaGATGCGCTTGCCCTTCACT | + |
Preference number: 5 (lower is better) Translates to: PHTQAPFHTHSGSSGCLSVESST*MRLPFT Trigger: AGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAAC...AGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAAGGGTGCTTGAGTGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | GCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGCATTGGGGTAGTGGCTaGTGCAGCATAGGCAGCTGG | + |
Preference number: 5 (lower is better) Translates to: ASLASKKKNAPPDISCRLHWGSG*CSIGSW Trigger: CCAGCTGCCTATGCTGCACAAGCCACTACCCCAATG...CAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 90 bp | CGAAGAGGCTGCGCAATTCCTGACTTGTACATGCAGCCGATACATTaGCCACGAAAATCTTCCAAGTGTTCAGGGGCCTCGGGCGCGACA | + |
Preference number: 5 (lower is better) Translates to: RRGCAIPDLYMQPIH*PRKSSKCSGASGAT Trigger: TGTCGCGCCCGAGGCCCCTGAACACTTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCTCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS GCA 90 bp | GCGTCCACGGCGCTCGAAGAGGCTGCGCAATTCCTGACTTGTACATaGAGCCGATACATTGCCCACGAAAATCTTCCAAGTGTTCAGGGG | + |
Preference number: 5 (lower is better) Translates to: ASTALEEAAQFLTCT*SRYIAHENLPSVQG Trigger: CCCCTGAACACTTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCTCTTCGAGCGCCGTGGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS-3UTR CAA 90 bp | ATTATAGGAGCCCGAATAGCGTGCGTAATCGGAATGGGCATCGGGCAGGCGACGGTTGAGAGTTCCACGTaGATGCGCTTGCCCTTCACT | + |
Preference number: 5 (lower is better) Translates to: IIGARIACVIGMGIGQATVESST*MRLPFT Trigger: AGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAAC...CGTCGCCTGCCCGATGCCCATTCCGATTACGCACGCTATTCGGGCTCCTATAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCCCTTCTTCTGCCCCTaGGTTGAGAGTTCCACGTTG | + |
Preference number: 5 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSPFFCP*VESSTL Trigger: CAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGG...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | TTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTTCTAGCTGTCACGTCTTCAGCAGCTGTGGCTGGTaGTGCCACATAAGCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: FHTHSGSSGCLSSSCHVFSSCGW*CHISSR Trigger: CCTGCTGCTTATGTGGCACAACCAGCCACAGCTGCT...GAAGACGTGACAGCTAGAAGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS TCA 90 bp | CACTCGATGACGCGTCCACGGCGCTCGAAGAGGCTGCGCAATTCCTaGCTTGTACATGCAGCCGATACATTGCCCACGAAAATCTTCCAA | + |
Preference number: 5 (lower is better) Translates to: HSMTRPRRSKRLRNS*LVHAADTLPTKIFQ Trigger: TTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCTCTTCGAGCGCCGTGGACGCGTCATCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS-3UTR CAA 90 bp | CCCCACACTCAAGCACCCTTCCACACCCACTCTGGGTCTTCAGGCTGCCTTTCTCATGCAGCCGATACATaGCCCACGAAAATCTTCCAA | + |
Preference number: 5 (lower is better) Translates to: PHTQAPFHTHSGSSGCLSHAADT*PTKIFQ Trigger: TTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATG...AGAAAGGCAGCCTGAAGACCCAGAGTGGGTGTGGAAGGGTGCTTGAGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | GATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTCTCAACAGCCTCCCTGGTTTCTTGGTCTaGTCCCCAGACTGGATAGCC | + |
Preference number: 5 (lower is better) Translates to: DLDTDQLTVPQDLSLNSLPGFLV*SPDWIA Trigger: GGCTATCCAGTCTGGGGACAAGACCAAGAAACCAGG...GAGGCTGTTGAGACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | ACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCAGTCACCATCAGCTTGTGGGCTGACGGGCTaGCCCATCAAAGCCACCAGT | + |
Preference number: 5 (lower is better) Translates to: TPPTWRDRELGLCQSPSACGLTG*PIKATS Trigger: ACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACA...AGCTGATGGTGACTGGCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GGGAGAGGTATGAGAGAGGGTGGTGATAACCTGGGTCTGCACCCTACCCTACCTCATGCAGCCGATACATaGCCCACGAAAATCTTCCAA | + |
Preference number: 5 (lower is better) Translates to: GRGMREGGDNLGLHPTLPHAADT*PTKIFQ Trigger: TTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATG...AGGTAGGGTAGGGTGCAGACCCAGGTTATCACCACCCTCTCTCATACCTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | AGAACGACGGACGAAAGTAGGGTCCCCAACTTCCCAGGGTGGACGCACCTCATATGCGCAATTCCTGACTaGTACATGCAGCCGATACAT | + |
Preference number: 5 (lower is better) Translates to: RTTDESRVPNFPGWTHLICAIPD*YMQPIH Trigger: ATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCA...TATGAGGTGCGTCCACCCTGGGAAGTTGGGGACCCTACTTTCGTCCGTCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CCCACTCATGGGCCCTGCACAAAAAGACCTTGGTTTATCAACAGAACGACGGACGGTCTGAACAACTGGTaGAGCCCCATAGGAACCAGC | + |
Preference number: 5 (lower is better) Translates to: PTHGPCTKRPWFINRTTDGLNNW*SPIGTS Trigger: GCTGGTTCCTATGGGGCTCAACCAGTTGTTCAGACC...GTCCGTCGTTCTGTTGATAAACCAAGGTCTTTTTGTGCAGGGCCCATGAGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS GCA 90 bp | CTTCACTTCTTTGCCGTTGAGCTGCGCGATGGCGGCTTTGGCATCTaGTTCCTTCTCCATGTGAACAAACGCGTAGTCTTTTACCACGTC | + |
Preference number: 5 (lower is better) Translates to: LHFFAVELRDGGFGI*FLLHVNKRVVFYHV Trigger: GACGTGGTAAAAGACTACGCGTTTGTTCACATGGAGAAGGAAGCAGATGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCCCACAGGATCTCAGTTGCGCAATTCCTGACTaGTACATGCAGCCGATACAT | + |
Preference number: 5 (lower is better) Translates to: VVSGDLDTDQLTVPQDLSCAIPD*YMQPIH Trigger: ATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCA...ACTGAGATCCTGTGGGACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CAGTCACCATCAGCTAAAACATCAGTGGTAAGCGGGGATTTGGACACGGACCAATTGCCCTTCACTTCTTaGCCGTTGAGCTGCGCGATG | + |
Preference number: 5 (lower is better) Translates to: QSPSAKTSVVSGDLDTDQLPFTS*PLSCAM Trigger: CATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAA...TTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGATGGTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GCCTCCCTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGGGAAGAAGCTGCTCCTaGTGTGTTATAGGAAGAAGC | + |
Preference number: 5 (lower is better) Translates to: ASLASKKKNAPPDISCRLGRSCS*CVIGRS Trigger: GCTTCTTCCTATAACACACAAGGAGCAGCTTCTTCC...CAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAGGGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CGTGATCAACTAAAATTGATTGCTGAGAAAGTCCAACCACTTGATCTGAACTCTGGGGTGCTGTTGGCGTaGGCAACGGCCCCCTGGGAC | + |
Preference number: 5 (lower is better) Translates to: RDQLKLIAEKVQPLDLNSGVLLA*ATAPWD Trigger: GTCCCAGGGGGCCGTTGCCAACGCCAACAGCACCCC...AGAGTTCAGATCAAGTGGTTGGACTTTCTCAGCAATCAATTTTAGTTGATCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | AAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACCTCCAAACACCCTTCTTCTGCCCCTaGGTTGAGAGTTCCACGTTG | + |
Preference number: 5 (lower is better) Translates to: KKKNAPPDISCRLYHLQTPFFCP*VESSTL Trigger: CAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGG...TGTTTGGAGGTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GGCACAGAGGAAATAGCTAAAGTAACCCTTTCCTGGCCTCCCTCGCATCTAAAAGGTCTGAACAACTGGTaGAGCCCCATAGGAACCAGC | + |
Preference number: 5 (lower is better) Translates to: GTEEIAKVTLSWPPSHLKGLNNW*SPIGTS Trigger: GCTGGTTCCTATGGGGCTCAACCAGTTGTTCAGACC...TTTTAGATGCGAGGGAGGCCAGGAAAGGGTTACTTTAGCTATTTCCTCTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATAAAAGGGAGAATCCAGCGAGGACTTaGTCGGCGAGCGGCGGAACG | + |
Preference number: 5 (lower is better) Translates to: RLYHLQTTLSIAHKNKRENPART*SASGGT Trigger: CGTTCCGCCGCTCGCCGACAAAGTCCTCGCTGGATT...CTCCCTTTTATTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | TCAGCTAAAACATCAGTGGTAAGCGGGGATTTGGACACGGACCAACTGACTGTCATAAGAAGCAGCCTGTaGTGCAGCATATGGGGCAGA | + |
Preference number: 5 (lower is better) Translates to: SAKTSVVSGDLDTDQLTVIRSSL*CSIWGR Trigger: TCTGCCCCATATGCTGCACAACAGGCTGCTTCTTAT...GACAGTCAGTTGGTCCGTGTCCAAATCCCCGCTTACCACTGATGTTTTAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CTTTCTTCTAGCTGTCACGTCTTCCTGGATGTCAAACTGGCTCACCTGACAGTGCGGAACCATACCTTTTaGACATGGCGACAGCCTTTT | + |
Preference number: 5 (lower is better) Translates to: LSSSCHVFLDVKLAHLTVRNHTF*TWRQPF Trigger: AAAAGGCTGTCGCCATGTCAAAAAGGTATGGTTCCG...CACTGTCAGGTGAGCCAGTTTGACATCCAGGAAGACGTGACAGCTAGAAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | GTCCAACCACTTGATCTGAACTCTCTAGTCCCAAAGATGGCATGCTATTTAAGATCCACGTTGATGCGCTaGCCCTTCACTTCTTTGCCG | + |
Preference number: 5 (lower is better) Translates to: VQPLDLNSLVPKMACYLRSTLMR*PFTSLP Trigger: CGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGA...TCTTAAATAGCATGCCATCTTTGGGACTAGAGAGTTCAGATCAAGTGGTTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006625.8 |
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CDS-3UTR CAA 90 bp | CGGTTGTATCACCTCCAAACAACCTTAAGTATCGCGCACAAAAATAAAAGGGAGTCCACGTTGATGCGCTaGCCCTTCACTTCTTTGCCG | + |
Preference number: 5 (lower is better) Translates to: RLYHLQTTLSIAHKNKRESTLMR*PFTSLP Trigger: CGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGA...CTCCCTTTTATTTTTGTGCGCGATACTTAAGGTTGTTTGGAGGTGATACAACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | CTCGCATCTAAAAAGAAAAACGCGCCGCCTGACATCAGCTGTCGGTTGTATCACGCATACAGTACCTTTTaGACATGGCGACAGCCTTTT | + |
Preference number: 5 (lower is better) Translates to: LASKKKNAPPDISCRLYHAYSTF*TWRQPF Trigger: AAAAGGCTGTCGCCATGTCAAAAAGGTACTGTATGC...GTGATACAACCGACAGCTGATGTCAGGCGGCGCGTTTTTCTTTTTAGATGCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCCCTGGTTTCTTGGTCTaGTCCCCAGACTGGATAGCC | + |
Preference number: 5 (lower is better) Translates to: ELRFLTPPTWRDRELGLCPGFLV*SPDWIA Trigger: GGCTATCCAGTCTGGGGACAAGACCAAGAAACCAGG...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | AGGATCCTTCAGACAGTGGGAAAAATCTATGAGCCAATCCTGCAAAATGTGGCTATAAGAAGCAGCCTGTaGTGCAGCATATGGGGCAGA | + |
Preference number: 5 (lower is better) Translates to: RILQTVGKIYEPILQNVAIRSSL*CSIWGR Trigger: TCTGCCCCATATGCTGCACAACAGGCTGCTTCTTAT...AGCCACATTTTGCAGGATTGGCTCATAGATTTTTCCCACTGTCTGAAGGATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113793.4 |
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CDS-3UTR CAA 90 bp | GAATTAAGATTTCTAACACCACCTACTTGGAGAGATAGGGAATTGGGACTATGCGGAAGAAGCTGCTCCTaGTGTGTTATAGGAAGAAGC | + |
Preference number: 5 (lower is better) Translates to: ELRFLTPPTWRDRELGLCGRSCS*CVIGRS Trigger: GCTTCTTCCTATAACACACAAGGAGCAGCTTCTTCC...GCATAGTCCCAATTCCCTATCTCTCCAAGTAGGTGGTGTTAGAAATCTTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | ACCACGAGCGCGCGACCTGGACGCAGCTCGTGGCCATaGAGGGCCTCGATGGCGCGCACCGCGCCAGCGTTC | + |
Preference number: 6 (lower is better) Translates to: TTSARPGRSSWP*RASMARTAPAF Trigger: GAACGCTGGCGCGGTGCGCGCCATCGAGGCCCTGCATGGCCACGAGCTGCGTCCAGGTCGCGCGCTCGTGGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS CCA 72 bp | GACCTGGACGCAGCTCGTGGCCATGCAGGGCCTCGATaGCGCGCACCGCGCCAGCGTTCTCGCGCATGTGCA | + |
Preference number: 6 (lower is better) Translates to: DLDAARGHAGPR*RAPRQRSRACA Trigger: TGCACATGCGCGAGAACGCTGGCGCGGTGCGCGCCATCGAGGCCCTGCATGGCCACGAGCTGCGTCCAGGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS TCA 72 bp | GGCCGTCAGAGGCGCCACATAAGAGGCTCGAGGAGGTaGACGGCGCAGGGGGCTGCGGTCGCGACCAAAGAA | + |
Preference number: 6 (lower is better) Translates to: GRQRRHIRGSRR*TAQGAAVATKE Trigger: TTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTTCACCTCCTCGAGCCTCTTATGTGGCGCCTCTGACGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | GGAAGGCTGGGCCCTATATGCAGCTCCCAGAGACACTaGGGGTTGGGCCCGGTAGGTGGCTGGCTGGGCCGT | + |
Preference number: 6 (lower is better) Translates to: GRLGPICSSQRH*GLGPVGGWLGR Trigger: ACGGCCCAGCCAGCCACCTACCGGGCCCAACCCTCAGTGTCTCTGGGAGCTGCATATAGGGCCCAGCCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | GGCAACGGCCCCCTGGGACATAGACAGGTAGGCTGCTaGTGGCTGGCCTGTCCCATCGTAGGCACTGCCCGG | + |
Preference number: 6 (lower is better) Translates to: GNGPLGHRQVGC*WLACPIVGTAR Trigger: CCGGGCAGTGCCTACGATGGGACAGGCCAGCCATCAGCAGCCTACCTGTCTATGTCCCAGGGGGCCGTTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | ACGGCGCAGGGGGCTGCGGTCGCGACCAAAGAATGGTaGTGTGGGCTGACGGGCTTGCCCATCAAAGCCACC | + |
Preference number: 6 (lower is better) Translates to: TAQGAAVATKEW*CGLTGLPIKAT Trigger: GGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | CAGCTCCCAGAGACACTGAGGGTTGGGCCCGGTAGGTaGCTGGCTGGGCCGTCAGAGGCGCCACATAAGAGG | + |
Preference number: 6 (lower is better) Translates to: QLPETLRVGPGR*LAGPSEAPHKR Trigger: CCTCTTATGTGGCGCCTCTGACGGCCCAGCCAGCCACCTACCGGGCCCAACCCTCAGTGTCTCTGGGAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | GCAGGGGGCTGCGGTCGCGACCAAAGAATGGTGGTGTaGGCTGACGGGCTTGCCCATCAAAGCCACCAGTGC | + |
Preference number: 6 (lower is better) Translates to: AGGCGRDQRMVV*ADGLAHQSHQC Trigger: GCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | GCAGCTCATGACCGTGCCATAGGGCGCGAAGAGAGCTaGCAACTCCTCCGGTGTCGTATCCGCCCCATCGAC | + |
Preference number: 6 (lower is better) Translates to: AAHDRAIGREES*QLLRCRIRPID Trigger: GTCGATGGGGCGGATACGACACCGGAGGAGTTGGCAGCTCTCTTCGCGCCCTATGGCACGGTCATGAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS GCA 72 bp | TCGATGGCGCGCACCGCGCCAGCGTTCTCGCGCATGTaGACGAAGGCAAACTGTTTCATGACGGCGCAGCTC | + |
Preference number: 6 (lower is better) Translates to: SMARTAPAFSRM*TKANCFMTAQL Trigger: GAGCTGCGCCGTCATGAAACAGTTTGCCTTCGTGCACATGCGCGAGAACGCTGGCGCGGTGCGCGCCATCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS GCA 72 bp | CATAAGAGGCTCGAGGAGGTGAACGGCGCAGGGGGCTaGGGTCGCGACCAAAGAATGGTGGTGTGGGCTGAC | + |
Preference number: 6 (lower is better) Translates to: HKRLEEVNGAGG*GRDQRMVVWAD Trigger: GTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCCCTGCGCCGTTCACCTCCTCGAGCCTCTTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | GGGCTGCGGTCGCGACCAAAGAATGGTGGTGTGGGCTaGCGGGCTTGCCCATCAAAGCCACCAGTGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: GLRSRPKNGGVG*RACPSKPPVLL Trigger: CAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | GGGCTGGACTCCACCATATGGGCCAAGCGAGGAAGCTaGAGCAGACTGGGAACTAGGGCTAGCCAGCTGACC | + |
Preference number: 6 (lower is better) Translates to: GLDSTIWAKRGS*SRLGTRASQLT Trigger: GGTCAGCTGGCTAGCCCTAGTTCCCAGTCTGCTGCAGCTTCCTCGCTTGGCCCATATGGTGGAGTCCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | AGACTGGGAACTAGGGCTAGCCAGCTGACCCCTGTATaGGGCCCCAAGGGAGACAGAGGGCTGAGCACGGTA | + |
Preference number: 6 (lower is better) Translates to: RLGTRASQLTPV*GPKGDRGLSTV Trigger: TACCGTGCTCAGCCCTCTGTCTCCCTTGGGGCCCCATACAGGGGTCAGCTGGCTAGCCCTAGTTCCCAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 90 bp | GGGGCTGCGGTCGCGACCAAAGAATGGTGGTGTGGGCTGACGGGCTaGCCCATCAAAGCCACCAGTGCTGTTGCCAAAAGCCTGCTGGTA | + |
Preference number: 6 (lower is better) Translates to: GAAVATKEWWCGLTG*PIKATSAVAKSLLV Trigger: TACCAGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGACCGCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | CCCAAGGGAGACAGAGGGCTGAGCACGGTAAGAAGCTaGCTGAGCTGCCATGGGCTGAGTCCGATAGCCAAC | + |
Preference number: 6 (lower is better) Translates to: PKGDRGLSTVRS*LSCHGLSPIAN Trigger: GTTGGCTATCGGACTCAGCCCATGGCAGCTCAGGCAGCTTCTTACCGTGCTCAGCCCTCTGTCTCCCTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 90 bp | GCCAGGGCAGGCCCCTTCTTCTGCCCCTTGGTTGAGAGTTCCACGTaGATGCGCTTGCCCTTCACTTCTTTGCCGTTGAGCTGCGCGATG | + |
Preference number: 6 (lower is better) Translates to: ARAGPFFCPLVESST*MRLPFTSLPLSCAM Trigger: CATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGGGCCTGCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | GTGTGGGCTGACGGGCTTGCCCATCAAAGCCACCAGTaGTGTTGCCAAAAGCCTGCTGGTAGTCGAAGGTGG | + |
Preference number: 6 (lower is better) Translates to: VWADGLAHQSHQ*CCQKPAGSRRW Trigger: CCACCTTCGACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | AGCCCCATAGGAACCAGCCATTGGGGTAGTGGCTTGTaGAGCATAGGCAGCTGGCTGGCTAGCATAGGCAGC | + |
Preference number: 6 (lower is better) Translates to: SPIGTSHWGSGL*SIGSWLASIGS Trigger: GCTGCCTATGCTAGCCAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTATGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | CCCATACGAAGAGGCAGCCTGGGCGCCATAAGAGGATaGCTGGTTACCATAGGAAGCAAGGGAGGAGCCCTG | + |
Preference number: 6 (lower is better) Translates to: PIRRGSLGAIRG*LVTIGSKGGAL Trigger: CAGGGCTCCTCCCTTGCTTCCTATGGTAACCAGCCATCCTCTTATGGCGCCCAGGCTGCCTCTTCGTATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | GACTGGATAGCCAGGGCAGGCCCCTTCTTCTGCCCCTaGGTTGAGAGTTCCACGTTGATGCGCTTGCCCTTC | + |
Preference number: 6 (lower is better) Translates to: DWIARAGPFFCP*VESSTLMRLPF Trigger: GAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGGGCCTGCCCTGGCTATCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 90 bp | GGCCCCTTCTTCTGCCCCTTGGTTGAGAGTTCCACGTTGATGCGCTaGCCCTTCACTTCTTTGCCGTTGAGCTGCGCGATGGCGGCTTTG | + |
Preference number: 6 (lower is better) Translates to: GPFFCPLVESSTLMR*PFTSLPLSCAMAAL Trigger: CAAAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | GATAGCCAGGGCAGGCCCCTTCTTCTGCCCCTTGGTTaGGAGTTCCACGTTGATGCGCTTGCCCTTCACTTC | + |
Preference number: 6 (lower is better) Translates to: DSQGRPLLLPLG*EFHVDALALHF Trigger: GAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGGGCCTGCCCTGGCTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | CGGTCGGAACCATACCTTTTACCACGTCACACTCGATaGCGCGTCCACGGCGCTCGAAGAGGCTGCGCAATT | + |
Preference number: 6 (lower is better) Translates to: RSEPYLLPRHTR*RVHGARRGCAI Trigger: AATTGCGCAGCCTCTTCGAGCGCCGTGGACGCGTCATCGAGTGTGACGTGGTAAAAGGTATGGTTCCGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180008.2 |
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CDS GCA 72 bp | GCTGACGGGCTTGCCCATCAAAGCCACCAGTGCTGTTaGCAAAAGCCTGCTGGTAGTCGAAGGTGGCAGAGA | + |
Preference number: 6 (lower is better) Translates to: ADGLAHQSHQCC*QKPAGSRRWQR Trigger: TCTCTGCCACCTTCGACTACCAGCAGGCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | GACAGAGGGCTGAGCACGGTAAGAAGCTGCCTGAGCTaGCATGGGCTGAGTCCGATAGCCAACACCCAAAGA | + |
Preference number: 6 (lower is better) Translates to: DRGLSTVRSCLS*HGLSPIANTQR Trigger: TCTTTGGGTGTTGGCTATCGGACTCAGCCCATGGCAGCTCAGGCAGCTTCTTACCGTGCTCAGCCCTCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | TCCACGTTGATGCGCTTGCCCTTCACTTCTTTGCCGTaGAGCTGCGCGATGGCGGCTTTGGCATCTGCTTCC | + |
Preference number: 6 (lower is better) Translates to: STLMRLPFTSLP*SCAMAALASAS Trigger: GGAAGCAGATGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | GTCGCGACCAAAGAATGGTGGTGTGGGCTGACGGGCTaGCCCATCAAAGCCACCAGTGCTGTTGCCAAAAGC | + |
Preference number: 6 (lower is better) Translates to: VATKEWWCGLTG*PIKATSAVAKS Trigger: GCTTTTGGCAACAGCACTGGTGGCTTTGATGGGCAAGCCCGTCAGCCCACACCACCATTCTTTGGTCGCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | TTGAGCCCCATAGGAACCAGCCATTGGGGTAGTGGCTaGTGCAGCATAGGCAGCTGGCTGGCTAGCATAGGC | + |
Preference number: 6 (lower is better) Translates to: LSPIGTSHWGSG*CSIGSWLASIG Trigger: GCCTATGCTAGCCAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTATGGGGCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 90 bp | CCCTTGGTTGAGAGTTCCACGTTGATGCGCTTGCCCTTCACTTCTTaGCCGTTGAGCTGCGCGATGGCGGCTTTGGCATCTGCTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: PLVESSTLMRLPFTS*PLSCAMAALASASF Trigger: GAAGGAAGCAGATGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 90 bp | AACAACTGGTTGAGCCCCATAGGAACCAGCCATTGGGGTAGTGGCTaGTGCAGCATAGGCAGCTGGCTGGCTAGCATAGGCAGCAGCTGT | + |
Preference number: 6 (lower is better) Translates to: NNWLSPIGTSHWGSG*CSIGSWLASIGSSC Trigger: ACAGCTGCTGCCTATGCTAGCCAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTATGGGGCTCAACCAGTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | ACGCGTCCACGGCGCTCGAAGAGGCTGCGCAATTCCTaGCTTGTACATGCAGCCGATACATTGCCCACGAAA | + |
Preference number: 6 (lower is better) Translates to: TRPRRSKRLRNS*LVHAADTLPTK Trigger: TTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCTCTTCGAGCGCCGTGGACGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS GCA 72 bp | TTGATGCGCTTGCCCTTCACTTCTTTGCCGTTGAGCTaGGCGATGGCGGCTTTGGCATCTGCTTCCTTCTCC | + |
Preference number: 6 (lower is better) Translates to: LMRLPFTSLPLS*AMAALASASFS Trigger: GGAGAAGGAAGCAGATGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | CTGAACAACTGGTTGAGCCCCATAGGAACCAGCCATTaGGGTAGTGGCTTGTGCAGCATAGGCAGCTGGCTG | + |
Preference number: 6 (lower is better) Translates to: LNNWLSPIGTSH*GSGLCSIGSWL Trigger: CAGCCAGCTGCCTATGCTGCACAAGCCACTACCCCAATGGCTGGTTCCTATGGGGCTCAACCAGTTGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | GAGAGTTCCACGTTGATGCGCTTGCCCTTCACTTCTTaGCCGTTGAGCTGCGCGATGGCGGCTTTGGCATCT | + |
Preference number: 6 (lower is better) Translates to: ESSTLMRLPFTS*PLSCAMAALAS Trigger: AGATGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | GGCCCCTTCTTCTGCCCCTTGGTTGAGAGTTCCACGTaGATGCGCTTGCCCTTCACTTCTTTGCCGTTGAGC | + |
Preference number: 6 (lower is better) Translates to: GPFFCPLVESST*MRLPFTSLPLS Trigger: GCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAAGAAGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS TCA 72 bp | GAACAAACGCGTAGTCTTTTACCACGTCACACTCGATaGCGCGTCCACGGCGCTCGAAGAGGCTGCGCAATT | + |
Preference number: 6 (lower is better) Translates to: EQTRSLLPRHTR*RVHGARRGCAI Trigger: AATTGCGCAGCCTCTTCGAGCGCCGTGGACGCGTCATCGAGTGTGACGTGGTAAAAGACTACGCGTTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CCA 72 bp | CAGTGCTGTTGCCAAAAGCCTGCTGGTAGTCGAAGGTaGCAGAGAAGCCACCAGTTCCAGGGAATGCTGTGT | + |
Preference number: 6 (lower is better) Translates to: QCCCQKPAGSRR*QRSHQFQGMLC Trigger: ACACAGCATTCCCTGGAACTGGTGGCTTCTCTGCCACCTTCGACTACCAGCAGGCTTTTGGCAACAGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | TTCTGCCCCTTGGTTGAGAGTTCCACGTTGATGCGCTaGCCCTTCACTTCTTTGCCGTTGAGCTGCGCGATG | + |
Preference number: 6 (lower is better) Translates to: FCPLVESSTLMR*PFTSLPLSCAM Trigger: CATCGCGCAGCTCAACGGCAAAGAAGTGAAGGGCAAGCGCATCAACGTGGAACTCTCAACCAAGGGGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS CAA 72 bp | GTCCACGGCGCTCGAAGAGGCTGCGCAATTCCTGACTaGTACATGCAGCCGATACATTGCCCACGAAAATCT | + |
Preference number: 6 (lower is better) Translates to: VHGARRGCAIPD*YMQPIHCPRKS Trigger: AGATTTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCTCTTCGAGCGCCGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS GCA 72 bp | TTTGCCGTTGAGCTGCGCGATGGCGGCTTTGGCATCTaGTTCCTTCTCCATGTGAACAAACGCGTAGTCTTT | + |
Preference number: 6 (lower is better) Translates to: FAVELRDGGFGI*FLLHVNKRVVF Trigger: AAAGACTACGCGTTTGTTCACATGGAGAAGGAAGCAGATGCCAAAGCCGCCATCGCGCAGCTCAACGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 |
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CDS GCA 72 bp | TGCGCAATTCCTGACTTGTACATGCAGCCGATACATTaGCCACGAAAATCTTCCAAGTGTTCAGGGGCCTCG | + |
Preference number: 6 (lower is better) Translates to: CAIPDLYMQPIH*PRKSSKCSGAS Trigger: CGAGGCCCCTGAACACTTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |
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CDS GCA 72 bp | GCGCTCGAAGAGGCTGCGCAATTCCTGACTTGTACATaGAGCCGATACATTGCCCACGAAAATCTTCCAAGT | + |
Preference number: 6 (lower is better) Translates to: ALEEAAQFLTCT*SRYIAHENLPS Trigger: ACTTGGAAGATTTTCGTGGGCAATGTATCGGCTGCATGTACAAGTCAGGAATTGCGCAGCCTCTTCGAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006625.8 ENSMUST00000113793.4 ENSMUST00000180008.2 |