Pregenerated sensors for RBM12B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052137Ensembl transcript IDs: ENSMUST00000063839.6, ENSMUST00000095143.9
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TACAGGCAAGTAGCAATAAAAGTGCCAAACCTGATTAATCAGTTAGCCTTCATTGAAAGGCATTCTATGTaGGGGATGGGGAGTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YRQVAIKVPNLINQLAFIERHSM*GMGSVE Trigger: TTCCACACTCCCCATCCCCCACATAGAATGCCTTTC...AATGAAGGCTAACTGATTAATCAGGTTTGGCACTTTTATTGCTACTTGCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| 3UTR CCA 72 bp | GTTCATTTTCTGGACTATTTAGTTTATAGGAGACACTaGCACAATGTCTTCACAAACAGTTCTACAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: VHFLDYLVYRRH*HNVFTNSSTGK Trigger: CTTGCCTGTAGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCCTATAAACTAAATAGTCCAGAAAATGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR TCA 90 bp | GCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGGAAAAAGTCATCTCCATCATGTaGCCTGGAACAGGCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: AFYVGDGECGRCPLKQEKVISIM*PGTGLC Trigger: ACACAAGCCTGTTCCAGGTCACATGATGGAGATGAC...TTTTTCCTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGGCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGCTTCTTGGGAGATCCTaGAGTCCTCATCAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RKAFYVGDGECGRCPLKQLLGRS*SPHQKL Trigger: AAGCTTCTGATGAGGACTTCAGGATCTCCCAAGAAG...CTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGGCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGAAAATCATCTTCCTGTaGCCAATCCTCCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RKAFYVGDGECGRCPLKQKIIFL*PILQRQ Trigger: CTGCCTCTGGAGGATTGGCCACAGGAAGATGATTTT...CTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | GCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGGAAAAACTTCTTGGGAGATCCTaGAGTCCTCATCAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: AFYVGDGECGRCPLKQEKLLGRS*SPHQKL Trigger: AAGCTTCTGATGAGGACTTCAGGATCTCCCAAGAAG...TTTTTCCTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | GCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGGAAAAATTCACAAAGGGATGTTaGCCTCTGAAATCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AFYVGDGECGRCPLKQEKFTKGC*PLKSGG Trigger: CCCACCTGATTTCAGAGGTCAACATCCCTTTGTGAA...TTTTTCCTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | TACAGGCAAGTAGCAATAAAAGTGCCAAACCTGATTAATCAGTTAGCCTTCATTCTTCTGGGGAGTGCCTaGAGTCCTCAGGAGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: YRQVAIKVPNLINQLAFILLGSA*SPQEST Trigger: GGTGCTCTCCTGAGGACTTCAGGCACTCCCCAGAAG...AATGAAGGCTAACTGATTAATCAGGTTTGGCACTTTTATTGCTACTTGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR TCA 90 bp | ATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCTATGTGGGGGATCTTCTGGGGAGTGCCTaGAGTCCTCAGGAGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: INTVEENCLLRKAFYVGDLLGSA*SPQEST Trigger: GGTGCTCTCCTGAGGACTTCAGGCACTCCCCAGAAG...ATCCCCCACATAGAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | TACAGGCAAGTAGCAATAAAAGTGCCAAACCTGATTAATCAGTTAGCCTTCATTCCTCTCGGGAACGCCTaGAATGTTCTTGGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: YRQVAIKVPNLINQLAFIPLGNA*NVLGVA Trigger: GGCCACCCCAAGAACATTTCAGGCGTTCCCGAGAGG...AATGAAGGCTAACTGATTAATCAGGTTTGGCACTTTTATTGCTACTTGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR TCA 90 bp | GCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGGAAAAATTGCCACCTTGTAGATaGTCAAAGTTCACAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: AFYVGDGECGRCPLKQEKLPPCR*SKFTKG Trigger: TCCCTTTGTGAACTTTGATCATCTACAAGGTGGCAA...TTTTTCCTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | GGAGACACTGGCACAATGTCTTCACAAACAGTTCTACAGGCAAGTAGCAATAAATTCACAAAGGGATGTTaGCCTCTGAAATCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GDTGTMSSQTVLQASSNKFTKGC*PLKSGG Trigger: CCCACCTGATTTCAGAGGTCAACATCCCTTTGTGAA...TTTATTGCTACTTGCCTGTAGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR CCA 90 bp | CTGGACTATTTAGTTTATAGGAGACACTGGCACAATGTCTTCACAAACAGTTCTCGCCTGAAATGTTCTTaGGGTGGCCGTCTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: LDYLVYRRHWHNVFTNSSRLKCS*GGRLMC Trigger: GCACATTAGACGGCCACCCCAAGAACATTTCAGGCG...AGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCCTATAAACTAAATAGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR CCA 90 bp | GCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGGAAAAATATCTCAAATCTTCTTaGGAGATCCTGAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AFYVGDGECGRCPLKQEKYLKSS*EILKSS Trigger: TGAGGACTTCAGGATCTCCCAAGAAGATTTGAGATA...TTTTTCCTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | CTGGACTATTTAGTTTATAGGAGACACTGGCACAATGTCTTCACAAACAGTTCTGTCATCTCCATCATGTaGCCTGGAACAGGCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LDYLVYRRHWHNVFTNSSVISIM*PGTGLC Trigger: ACACAAGCCTGTTCCAGGTCACATGATGGAGATGAC...AGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCCTATAAACTAAATAGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR CCA 90 bp | ATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCTATGTGGGGGATGAAGTGCTCCTGGGATaGCCGTCTGAAGTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: INTVEENCLLRKAFYVGDEVLLG*PSEVFF Trigger: GAAGAAGACTTCAGACGGCCATCCCAGGAGCACTTC...ATCCCCCACATAGAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR CCA 90 bp | TACTTTCACTGCATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCGAAGTGCTCCTGGGATaGCCGTCTGAAGTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YFHCINTVEENCLLRKAFEVLLG*PSEVFF Trigger: GAAGAAGACTTCAGACGGCCATCCCAGGAGCACTTC...GAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGATGCAGTGAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR TCA 90 bp | GGAGACACTGGCACAATGTCTTCACAAACAGTTCTACAGGCAAGTAGCAATAAACTCATTATACTGTATTaGAACGGAATCAGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: GDTGTMSSQTVLQASSNKLIILY*NGIRDD Trigger: GTCATCCCTGATTCCGTTTCAATACAGTATAATGAG...TTTATTGCTACTTGCCTGTAGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR TCA 90 bp | CTGGACTATTTAGTTTATAGGAGACACTGGCACAATGTCTTCACAAACAGTTCTTTGCCACCTTGTAGATaGTCAAAGTTCACAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LDYLVYRRHWHNVFTNSSLPPCR*SKFTKG Trigger: TCCCTTTGTGAACTTTGATCATCTACAAGGTGGCAA...AGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCCTATAAACTAAATAGTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR CCA 90 bp | TACTTTCACTGCATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCAAAATCATCTTCCTGTaGCCAATCCTCCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YFHCINTVEENCLLRKAFKIIFL*PILQRQ Trigger: CTGCCTCTGGAGGATTGGCCACAGGAAGATGATTTT...GAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGATGCAGTGAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR CCA 90 bp | CTGGACTATTTAGTTTATAGGAGACACTGGCACAATGTCTTCACAAACAGTTCTTATCTCAAATCTTCTTaGGAGATCCTGAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LDYLVYRRHWHNVFTNSSYLKSS*EILKSS Trigger: TGAGGACTTCAGGATCTCCCAAGAAGATTTGAGATA...AGAACTGTTTGTGAAGACATTGTGCCAGTGTCTCCTATAAACTAAATAGTCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR TCA 90 bp | TACTTTCACTGCATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCCTCATTATACTGTATTaGAACGGAATCAGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: YFHCINTVEENCLLRKAFLIILY*NGIRDD Trigger: GTCATCCCTGATTCCGTTTCAATACAGTATAATGAG...GAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGATGCAGTGAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS CCA 90 bp | CTGCCTATGATCTTTCTCATGACACTGCCTAAAATCATCTTCCTGTaGCCAATCCTCCAGAGGCAGTCTCCAGTCTTCCTCCCTAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LPMIFLMTLPKIIFL*PILQRQSPVFLPRV Trigger: CACTCTAGGGAGGAAGACTGGAGACTGCCTCTGGAGGATTGGCCACAGGAAGATGATTTTAGGCAGTGTCATGAGAAAGATCATAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 90 bp | GACCGTTTCCGAAAATGTCTACCATTAATCCTTCTTGAAGGAGAATaGTCTTCAGATCTCATACGAGGAGTGTCACCGCCCTCGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: DRFRKCLPLILLEGE*SSDLIRGVSPPSVA Trigger: TGCAACCGAGGGCGGTGACACTCCTCGTATGAGATCTGAAGAGCATTCTCCTTCAAGAAGGATTAATGGTAGACATTTTCGGAAACGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR CAA 90 bp | GCATTCTATGTGGGGGATGGGGAGTGTGGAAGATGTCCACTGAAACAGGAAAAATCATTAGCATTGGCTTaGAATGGAAGATTCGAGATC | + |
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Preference number: 5 (lower is better) Translates to: AFYVGDGECGRCPLKQEKSLALA*NGRFEI Trigger: GATCTCGAATCTTCCATTCAAAGCCAATGCTAATGA...TTTTTCCTGTTTCAGTGGACATCTTCCACACTCCCCATCCCCCACATAGAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR CAA 90 bp | TACAGGCAAGTAGCAATAAAAGTGCCAAACCTGATTAATCAGTTAGCCTTCATTACGCCTGAAATGTTCTaGGGGTGGCCGTCTAATGTG | + |
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Preference number: 5 (lower is better) Translates to: YRQVAIKVPNLINQLAFITPEMF*GWPSNV Trigger: CACATTAGACGGCCACCCCAAGAACATTTCAGGCGT...AATGAAGGCTAACTGATTAATCAGGTTTGGCACTTTTATTGCTACTTGCCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063839.6 |
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| CDS-3UTR CAA 90 bp | ATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCTATGTGGGGGATACGCCTGAAATGTTCTaGGGGTGGCCGTCTAATGTG | + |
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Preference number: 5 (lower is better) Translates to: INTVEENCLLRKAFYVGDTPEMF*GWPSNV Trigger: CACATTAGACGGCCACCCCAAGAACATTTCAGGCGT...ATCCCCCACATAGAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 90 bp | CGCCCTCTTCCTACTCGAGCAGTTCTTTTCATTTCTATGGTCTTCTaGATTTCTACCTTGCTACTAAGAAAAAGCTCTACAGATGAATCC | + |
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Preference number: 5 (lower is better) Translates to: RPLPTRAVLFISMVF*ISTLLLRKSSTDES Trigger: GGATTCATCTGTAGAGCTTTTTCTTAGTAGCAAGGTAGAAATGCAGAAGACCATAGAAATGAAAAGAACTGCTCGAGTAGGAAGAGGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 90 bp | TCGGTTGCAGTACCACCAAATTCAATCCACTGTTGTTCTGAACCCTaGATGACTTCTATAAATCTTGAACCCATGAAACTTCTATGGCAT | + |
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Preference number: 5 (lower is better) Translates to: SVAVPPNSIHCCSEP*MTSINLEPMKLLWH Trigger: ATGCCATAGAAGTTTCATGGGTTCAAGATTTATAGAAGTCATGCAGGGTTCAGAACAACAGTGGATTGAATTTGGTGGTACTGCAACCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 90 bp | TGTGTCCTCTCATTAGACAACCAGGAAGACTTTATACCAAACTCCTaGATTTGTTCCTCAGATATAAGTCTTAACAACACCTCTATCCCC | + |
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Preference number: 5 (lower is better) Translates to: CVLSLDNQEDFIPNS*ICSSDISLNNTSIP Trigger: GGGGATAGAGGTGTTGTTAAGACTTATATCTGAGGAACAAATGCAGGAGTTTGGTATAAAGTCTTCCTGGTTGTCTAATGAGAGGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS TCA 90 bp | CAGTCTTATGCAAACCCAGGGCAGTATTATAGTCTTTTTGATTCTTaGACATCACAAAGGCATAGCGTGTTCTTCTTTCATCTTTATACA | + |
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Preference number: 5 (lower is better) Translates to: QSYANPGQYYSLFDS*TSQRHSVFFFHLYT Trigger: TGTATAAAGATGAAAGAAGAACACGCTATGCCTTTGTGATGTTCAAGAATCAAAAAGACTATAATACTGCCCTGGGTTTGCATAAGACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS-3UTR CAA 90 bp | TACTTTCACTGCATCAATACTGTGGAAGAAAACTGTTTACTTAGAAAGGCATTCTCATTAGCATTGGCTTaGAATGGAAGATTCGAGATC | + |
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Preference number: 5 (lower is better) Translates to: YFHCINTVEENCLLRKAFSLALA*NGRFEI Trigger: GATCTCGAATCTTCCATTCAAAGCCAATGCTAATGA...GAATGCCTTTCTAAGTAAACAGTTTTCTTCCACAGTATTGATGCAGTGAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS CAA 90 bp | GAGAATGCTCTTCAGATCTCATACGAGGAGTGTCACCGCCCTCGGTaGCAGTACCACCAAATTCAATCCACTGTTGTTCTGAACCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ENALQISYEECHRPR*QYHQIQSTVVLNPA Trigger: TGCAGGGTTCAGAACAACAGTGGATTGAATTTGGTGGTACTGCAACCGAGGGCGGTGACACTCCTCGTATGAGATCTGAAGAGCATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS CCA 72 bp | ATCTTTCTCATGACACTGCCTAAAATCATCTTCCTGTaGCCAATCCTCCAGAGGCAGTCTCCAGTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: IFLMTLPKIIFL*PILQRQSPVFL Trigger: GAGGAAGACTGGAGACTGCCTCTGGAGGATTGGCCACAGGAAGATGATTTTAGGCAGTGTCATGAGAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS CCA 72 bp | AGATCTAAAATTTTTAGGAAGTCGAAGGTCCTTCTCTaGAACTTCCCTGAGGTCTTCCACAGACACCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSKIFRKSKVLL*NFPEVFHRHPP Trigger: AGGCGGGTGTCTGTGGAAGACCTCAGGGAAGTTCCAGAGAAGGACCTTCGACTTCCTAAAAATTTTAGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 72 bp | CGAAAATGTCTACCATTAATCCTTCTTGAAGGAGAATaGTCTTCAGATCTCATACGAGGAGTGTCACCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RKCLPLILLEGE*SSDLIRGVSPP Trigger: GGGCGGTGACACTCCTCGTATGAGATCTGAAGAGCATTCTCCTTCAAGAAGGATTAATGGTAGACATTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS TCA 72 bp | AGAGGAGAGCGAGAACGTGCTCTAGGAGATTTTGAATaGGACCGTTTCCGAAAATGTCTACCATTAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: RGERERALGDFE*DRFRKCLPLIL Trigger: AAGGATTAATGGTAGACATTTTCGGAAACGGTCTCATTCAAAATCTCCTAGAGCACGTTCTCGCTCTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS TCA 72 bp | TCCAAGAGGAGAGCGAGAACGTGCTCTAGGAGATTTTaGATGAGACCGTTTCCGAAAATGTCTACCATTAAT | + |
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Preference number: 6 (lower is better) Translates to: SKRRARTCSRRF*MRPFPKMSTIN Trigger: ATTAATGGTAGACATTTTCGGAAACGGTCTCATTCAAAATCTCCTAGAGCACGTTCTCGCTCTCCTCTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS TCA 72 bp | TTTCTTGGCCTTAAGTCAAGTCCTGTACCATTTGTATaGAACCCAGCATCTCGATTAACCGAAGAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: FLGLKSSPVPFV*NPASRLTEEPY Trigger: ATATGGCTCTTCGGTTAATCGAGATGCTGGGTTTCATACAAATGGTACAGGACTTGACTTAAGGCCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS CAA 90 bp | TGCATTTCTACCTTGCTACTAAGAAAAAGCTCTACAGATGAATCCTaGATAAACCCTCCTGAGCGACTTATAGCACGTCTTGCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CISTLLLRKSSTDES*INPPERLIARLASS Trigger: TGAAGATGCAAGACGTGCTATAAGTCGCTCAGGAGGGTTTATCAAGGATTCATCTGTAGAGCTTTTTCTTAGTAGCAAGGTAGAAATGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 72 bp | GTACCACCAAATTCAATCCACTGTTGTTCTGAACCCTaGATGACTTCTATAAATCTTGAACCCATGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: VPPNSIHCCSEP*MTSINLEPMKL Trigger: AAGTTTCATGGGTTCAAGATTTATAGAAGTCATGCAGGGTTCAGAACAACAGTGGATTGAATTTGGTGGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 72 bp | TCATTAGACAACCAGGAAGACTTTATACCAAACTCCTaGATTTGTTCCTCAGATATAAGTCTTAACAACACC | + |
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Preference number: 6 (lower is better) Translates to: SLDNQEDFIPNS*ICSSDISLNNT Trigger: GGTGTTGTTAAGACTTATATCTGAGGAACAAATGCAGGAGTTTGGTATAAAGTCTTCCTGGTTGTCTAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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| CDS GCA 72 bp | TCATCCTCAACAAGAGAAAAGTCTGCAAAGAACTTCTaGACTTCACCCTTTGTAACATCAAATGGTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: SSSTREKSAKNF*TSPFVTSNGKF Trigger: AAATTTACCATTTGATGTTACAAAGGGTGAAGTGCAGAAGTTCTTTGCAGACTTTTCTCTTGTTGAGGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063839.6 ENSMUST00000095143.9 |
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