Pregenerated sensors for RBM12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089824Ensembl transcript IDs: ENSMUST00000059647.12, ENSMUST00000109604.9, ENSMUST00000128499.2, ENSMUST00000131377.8, ENSMUST00000138068.2
Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGTACTCAGTGAGCACCGCCAGAAACGTCCCCAGAGCACAGACTaGGAGTCATTGGACAGATTACGGTCTTCACTCATTTTCCAACGC | + |
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Preference number: 1 (lower is better) Translates to: KVLSEHRQKRPQSTD*ESLDRLRSSLIFQR Trigger: GCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCAATGACTCCCAGTCTGTGCTCTGGGGACGTTTCTGGCGGTGCTCACTGAGTACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR CCA 90 bp | GTGAGCACCGCCAGAAACGTCCCCAGAGCACAGACTGGGAGTCATTaGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTG | + |
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Preference number: 1 (lower is better) Translates to: VSTARNVPRAQTGSH*TDYGLHSFSNAFKL Trigger: CAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCAATGACTCCCAGTCTGTGCTCTGGGGACGTTTCTGGCGGTGCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR CAA 90 bp | AGTGAGCACCGCCAGAAACGTCCCCAGAGCACAGACTGGGAGTCATaGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: SEHRQKRPQSTDWES*DRLRSSLIFQRFQT Trigger: AGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCAATGACTCCCAGTCTGTGCTCTGGGGACGTTTCTGGCGGTGCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAGGTCAATTAGGAAGATaGAGCAGCAACACTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTGQLGR*SSNTEA Trigger: TGCTTCAGTGTTGCTGCTTCATCTTCCTAATTGACC...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCCAATCTATCTGCAATTaGAACAATCCACAGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LFKACTTLSLNRPPYCLSQSICN*NNPQVL Trigger: TAGAACCTGTGGATTGTTTCAATTGCAGATAGATTG...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTATAAAATGCACGGAGTaGCCTCAATTCTCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRNTVALRQSLQQPLYRTIKCTE*PQFSLL Trigger: CAGAAGAGAGAATTGAGGTCACTCCGTGCATTTTAT...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCCACTTTTCAAAGCCTaGACAACCCTTTCCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAPLFKA*TTLSLN Trigger: GTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAGTGG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGGTCAATTAGGAAGATaGAGCAGCAACACTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAGQLGR*SSNTEA Trigger: TGCTTCAGTGTTGCTGCTTCATCTTCCTAATTGACC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAAGGATCTTTCATTCTaGACTACTACTGCTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTKDLSF*TTTANK Trigger: TTTGTTAGCAGTAGTAGTGCAGAATGAAAGATCCTT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTGTACTGATTACAAGTaGTCAATTAGGAAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: SRNTVALRQSLQQPLYRTCTDYK*SIRKMK Trigger: CTTCATCTTCCTAATTGACCACTTGTAATCAGTACA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTATAAAATGCACGGAGTaGCCTCAATTCTCTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GVSEQDVKNQMLLRERTFIKCTE*PQFSLL Trigger: CAGAAGAGAGAATTGAGGTCACTCCGTGCATTTTAT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGATCGAGAATTACAAATaGTCTCTACTGTATGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAIENYK*SLLYAK Trigger: TTTGGCATACAGTAGAGACCATTTGTAATTCTCGAT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTGCAATGTTTATTCTGTaGGTTGTAAAACAGCCAACC | + |
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Preference number: 2 (lower is better) Translates to: GVSEQDVKNQMLLRERTFAMFIL*VVKQPT Trigger: GGTTGGCTGTTTTACAACTCACAGAATAAACATTGC...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTGTACTGATTACAAGTaGTCAATTAGGAAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFCTDYK*SIRKMK Trigger: CTTCATCTTCCTAATTGACCACTTGTAATCAGTACA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR TCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTGCAATGTTTATTCTGTaGGTTGTAAAACAGCCAACC | + |
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Preference number: 2 (lower is better) Translates to: DLSFCTTTANKTTTFISVAMFIL*VVKQPT Trigger: GGTTGGCTGTTTTACAACTCACAGAATAAACATTGC...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTAAGGATCTTTCATTCTaGACTACTACTGCTAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: GVSEQDVKNQMLLRERTFKDLSF*TTTANK Trigger: TTTGTTAGCAGTAGTAGTGCAGAATGAAAGATCCTT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTATCGAGAATTACAAATaGTCTCTACTGTATGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: DLSFCTTTANKTTTFISVIENYK*SLLYAK Trigger: TTTGGCATACAGTAGAGACCATTTGTAATTCTCGAT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR TCA 72 bp | TTACACATGGCAATTGTGAGTGGGAAAGGTACTCAGTaGGCACCGCCAGAAACGTCCCCAGAGCACAGACTG | + |
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Preference number: 3 (lower is better) Translates to: LHMAIVSGKGTQ*APPETSPEHRL Trigger: CAGTCTGTGCTCTGGGGACGTTTCTGGCGGTGCTCACTGAGTACCTTTCCCACTCACAATTGCCATGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR CCA 72 bp | AGTGAGCACCGCCAGAAACGTCCCCAGAGCACAGACTaGGAGTCATTGGACAGATTACGGTCTTCACTCATT | + |
|
Preference number: 3 (lower is better) Translates to: SEHRQKRPQSTD*ESLDRLRSSLI Trigger: AATGAGTGAAGACCGTAATCTGTCCAATGACTCCCAGTCTGTGCTCTGGGGACGTTTCTGGCGGTGCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR TCA 72 bp | GGCAAAAGTAGCCAACTTCCAATGCCATCACTGGCATaGGCCCCCTCCACGAGCTCTACTCACGTTTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: GKSSQLPMPSLA*APSTSSTHVSI Trigger: AATAGAAACGTGAGTAGAGCTCGTGGAGGGGGCTCATGCCAGTGATGGCATTGGAAGTTGGCTACTTTTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR CCA 72 bp | CAAATGGCAAAAGTAGCCAACTTCCAATGCCATCACTaGCATGAGCCCCCTCCACGAGCTCTACTCACGTTT | + |
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Preference number: 3 (lower is better) Translates to: QMAKVANFQCHH*HEPPPRALLTF Trigger: AAACGTGAGTAGAGCTCGTGGAGGGGGCTCATGCCAGTGATGGCATTGGAAGTTGGCTACTTTTGCCATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR CCA 72 bp | GCCAGAAACGTCCCCAGAGCACAGACTGGGAGTCATTaGACAGATTACGGTCTTCACTCATTTTCCAACGCT | + |
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Preference number: 3 (lower is better) Translates to: ARNVPRAQTGSH*TDYGLHSFSNA Trigger: AGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCAATGACTCCCAGTCTGTGCTCTGGGGACGTTTCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR TCA 72 bp | TACAAGTGGTCAATTAGGAAGATGAAGCAGCAACACTaGAGCAGGGCCGTCTATACAGCAAGAACCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: YKWSIRKMKQQH*SRAVYTARTLQ Trigger: CTGGAGGGTTCTTGCTGTATAGACGGCCCTGCTTCAGTGTTGCTGCTTCATCTTCCTAATTGACCACTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGCAGACTTCTCGATATaGGTGTTTGAAACCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SRNTVALRQSLQQPLYRTADFSI*VFETRA Trigger: AGCTCTGGTTTCAAACACCAATATCGAGAAGTCTGC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR TCA 72 bp | AATGGTGTACTGATTACAAGTGGTCAATTAGGAAGATaGAGCAGCAACACTGAAGCAGGGCCGTCTATACAG | + |
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Preference number: 3 (lower is better) Translates to: NGVLITSGQLGR*SSNTEAGPSIQ Trigger: CTGTATAGACGGCCCTGCTTCAGTGTTGCTGCTTCATCTTCCTAATTGACCACTTGTAATCAGTACACCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCCAATCTATCTGCAATaGAAACAATCCACAGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFPIYLQ*KQSTGS Trigger: AGAACCTGTGGATTGTTTCAATTGCAGATAGATTGG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR GCA 72 bp | CAAGGTGAGTATTTCCACCTAAAAACCACGAGTGCTTaGTTACTTCCATATATGTACGAACGCCTAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: QGEYFHLKTTSA*LLPYMYERLDF Trigger: AAAATCTAGGCGTTCGTACATATATGGAAGTAAGCAAGCACTCGTGGTTTTTAGGTGGAAATACTCACCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTGCGGGACCAGGCATTaGGGGACCAGGCATTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSCGTRH*GTRHCR Trigger: CCTGCAATGCCTGGTCCCGCAATGCCTGGTCCCGCA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR GCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTGCAGGACCAGGCATTaGGGGACCAGGTATTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSCRTRH*GTRYSR Trigger: GCGGGAATACCTGGTCCCGCAATGCCTGGTCCTGCA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR GCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACACTCCTGCACTGGGGATaGCAGCACCAGGTATTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTLLHWG*QHQVLR Trigger: CCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAG...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR GCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTGCGGGACCAGGCATTaGAGGACCAGGCATTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTCGTRH*RTRHCG Trigger: CCCGCAATGCCTGGTCCTGCAATGCCTGGTCCCGCA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR GCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAATGCTCTTCTCCTCCTaGACTGGGGATGCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTMLFSS*TGDAST Trigger: GGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCAT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCAAGGGACTGGGGGAATaGGAGGAACAGGTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSKGLGE*EEQVAQ Trigger: CTGTGCCACCTGTTCCTCCCATTCCCCCAGTCCCTT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| 3UTR CAA 72 bp | CGCCAGAAACGTCCCCAGAGCACAGACTGGGAGTCATaGGACAGATTACGGTCTTCACTCATTTTCCAACGC | + |
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Preference number: 4 (lower is better) Translates to: RQKRPQSTDWES*DRLRSSLIFQR Trigger: GCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCAATGACTCCCAGTCTGTGCTCTGGGGACGTTTCTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAGTGGCGAATGTCCATaGTCCCCGCCACAATTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTSGECP*SPPQLG Trigger: TCCCAATTGTGGCGGGGACCATGGACATTCGCCACT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCAGAAGTCCCCATGCTTaGAGGAGCGGTTCCTACGCT | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSRSPHA*RSGSYA Trigger: AGCGTAGGAACCGCTCCTCCAAGCATGGGGACTTCT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCAGGAATCGGTGGCGGTaGGACCGTGTTCATTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSRNRWR*DRVHWR Trigger: TCTCCAATGAACACGGTCCCACCGCCACCGATTCCT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAGATTGGAGGAATCGGTaGCGGTGGGACCGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTDWRNR*RWDRVH Trigger: ATGAACACGGTCCCACCGCCACCGATTCCTCCAATC...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAATGGATGGCAGCGGTaGCAAAGATGGCATCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTNGWQR*QRWHRW Trigger: CCAGCGATGCCATCTTTGCCACCGCTGCCATCCATT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCCTGGTATTGGGGGAATaGATGGCAGCGGTGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSLVLGE*MAAVAK Trigger: CTTTGCCACCGCTGCCATCCATTCCCCCAATACCAG...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAGGAGGAACTGGTATTaGGGGAATGGATGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTRRNWY*GNGWQR Trigger: CCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACACACAGGAGGCAATGTTaGTACCGGAGGAGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTHRRQC*YRRRNW Trigger: CCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTG...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR TCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCGCTAGGTGGTGGTCCTaGTCTACTAGCATTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSARWWS*STSICW Trigger: CCAGCAAATGCTAGTAGATCAGGACCACCACCTAGC...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACATATTGGGGGAATGGATaGCAGCGGTGGCAAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTYWGNG*QRWQRW Trigger: CCATCTTTGCCACCGCTGCCATCCATTCCCCCAATA...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTCTTCTCCTCCTGCACTaGGGATGCCAGCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTLLLLH*GCQHQV Trigger: TACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAG...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCCCAGGCCCAAAGGCTaGAGGCCCACTCAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAPRPKG*RPTQMP Trigger: GGGCATTTGAGTGGGCCTCCAGCCTTTGGGCCTGGG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTCTCTGTGGCAGGACTaGCTTCCACATAGCGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSSLWQD*LPHSVE Trigger: TTCAACGCTATGTGGAAGTCAGTCCTGCCACAGAGA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTCCCACTGGGCGATTTTaGCCTTGGAAGTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTPTGRF*PWKCLW Trigger: CCACAGACACTTCCAAGGTCAAAATCGCCCAGTGGG...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCACAATTGGGAGACCTTaGAAACGGATGACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSTIGRP*KRMTTA Trigger: GGCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGTGCAGGACCAGGCATTaGGGGACCAGGTATTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDACRTRH*GTRYSR Trigger: GCGGGAATACCTGGTCCCGCAATGCCTGGTCCTGCA...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGGTCCCCGCCACAATTaGGAGACCTTGCAAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTGPRHN*ETLQTD Trigger: ATCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTAGAAGTCCCCATGCTTaGAGGAGCGGTTCCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTRSPHA*RSGSYA Trigger: AGCGTAGGAACCGCTCCTCCAAGCATGGGGACTTCT...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCAGGCATTCCAGAGCTaGGCATCCCAGCACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAQAFQS*ASQHQA Trigger: TGCCTGGTGCTGGGATGCCCAGCTCTGGAATGCCTG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTACCCCCAATATGGATTaGGCCAGGCCCAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFTPNMD*ARPRPR Trigger: CCTGGGCCTGGGCCTGGCCCAATCCATATTGGGGGT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCAAGGGTGGCATGCCTaGCATAGGAGGCAGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAQGWHA*HRRQCG Trigger: ACCACACTGCCTCCTATGTCAGGCATGCCACCCTTG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACATGCTTAAAAGTGATATaGCCTCCAGCAGCTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTCLKVI*PPAATH Trigger: GTGGGTAGCTGCTGGAGGTCATATCACTTTTAAGCA...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTGCTTAAAAGTGATATaGCCTCCAGCAGCTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSCLKVI*PPAATH Trigger: GTGGGTAGCTGCTGGAGGTCATATCACTTTTAAGCA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACACCCTCTGGTCATAGCTaGAGTTCTGAAGTCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTPSGHS*SSEVVF Trigger: GAAAACGACTTCAGAACTTCAGCTATGACCAGAGGG...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCTCCTGCACTGGGGATaGCAGCACCAGGTATTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFLLHWG*QHQVLR Trigger: CCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCACAGTCAAGAAGACATaGTCTTCTCCTCCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSTVKKT*SSPPAL Trigger: CAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTGGCATCGCTGGGATTaGAGGAATCGGTGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFWHRWD*RNRWRW Trigger: CCACCGCCACCGATTCCTCCAATCCCAGCGATGCCA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTACCGGAGGAGGAACTaGTATTGGGGGAATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTYRRRN*YWGNGW Trigger: CCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCTGGTATCCCGGCAGTaGGAATTCCAGCAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDALVSRQ*EFQQQA Trigger: TGCCTGCTGCTGGAATTCCCACTGCCGGGATACCAG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCAGGCATTCCAGAGCTaGGCATCCCAGCACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFQAFQS*ASQHQA Trigger: TGCCTGGTGCTGGGATGCCCAGCTCTGGAATGCCTG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCACCAGGGAAGTTAAATaGTGGCCCATTATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSTREVK*WPIIGL Trigger: GAGGCCAATAATGGGCCACCATTTAACTTCCCTGGT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTCAGTGGCAAAAACGATaGAAGCCTCACCCAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTQWQKR*KPHPVH Trigger: GTGAACTGGGTGAGGCTTTCATCGTTTTTGCCACTG...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCAAGGGTGGCATGCCTaGCATAGGAGGCAGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFQGWHA*HRRQCG Trigger: ACCACACTGCCTCCTATGTCAGGCATGCCACCCTTG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTACAGATCATCAGGGTTaGTGGGAAGAGACTTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTTDHQG*WEETSR Trigger: GCGTGAAGTCTCTTCCCATCAACCCTGATGATCTGT...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAAAGCCTTCACCAGTTaGTTTCCCATTGGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTKAFTS*FPIGSI Trigger: TATGGACCCAATGGGAAAGCAACTGGTGAAGGCTTT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTTGCGGGACCAGGCATTaGAGGACCAGGCATTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTCGTRH*RTRHCG Trigger: CCCGCAATGCCTGGTCCTGCAATGCCTGGTCCCGCA...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTTGCGGGACCAGGCATTaGGGGACCAGGCATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTCGTRH*GTRHCR Trigger: CCTGCAATGCCTGGTCCCGCAATGCCTGGTCCCGCA...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGAGTGGCGAATGTCCATaGTCCCCGCCACAATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDASGECP*SPPQLG Trigger: TCCCAATTGTGGCGGGGACCATGGACATTCGCCACT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCACAGGAGGCAATGTTaGTACCGGAGGAGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAHRRQC*YRRRNW Trigger: CCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCTTCTCCTCCTGCACTaGGGATGCCAGCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFLLLLH*GCQHQV Trigger: TACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAGGGAAGTTAAATGGTaGCCCATTATTGGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTREVKW*PIIGLL Trigger: AAGGAGGCCAATAATGGGCCACCATTTAACTTCCCT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTCCCAGGCCCAAAGGCTaGAGGCCCACTCAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTPRPKG*RPTQMP Trigger: GGGCATTTGAGTGGGCCTCCAGCCTTTGGGCCTGGG...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCATTATTGGCCTCCTTTaGTCCTACAGTCAAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSIIGLL*SYSQED Trigger: GTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAAT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGCGCCCCCATCGGGGATaGTTAATCCAGAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDARPHRG*LIQRRS Trigger: ACTTCTTCTCTGGATTAACCATCCCCGATGGGGGCG...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAGCGGAATATCTAAGTTaGCAGTTTCAAAACGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTAEYLS*QFQNAY Trigger: GTAGGCGTTTTGAAACTGCCAACTTAGATATTCCGC...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTTGGCACCGAAGGGACTaGGGGAATGGGAGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTWHRRD*GNGRNR Trigger: CCTGTTCCTCCCATTCCCCCAGTCCCTTCGGTGCCA...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTCGACTCGGAGCCCATaGAAAAACTCTCTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTSTRSP*KNSLTS Trigger: TGATGTCAGAGAGTTTTTCCATGGGCTCCGAGTCGA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTACCAGGGAAGTTAAATaGTGGCCCATTATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTTREVK*WPIIGL Trigger: GAGGCCAATAATGGGCCACCATTTAACTTCCCTGGT...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACACCCACTTATATTATTTaGTGCACCTCCAAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTPTYII*CTSKTW Trigger: CCAGGTTTTGGAGGTGCACCAAATAATATAAGTGGG...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTACCCCCAATATGGATTaGGCCAGGCCCAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVTPNMD*ARPRPR Trigger: CCTGGGCCTGGGCCTGGCCCAATCCATATTGGGGGT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTGCTAGGTGGTGGTCCTaGTCTACTAGCATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFARWWS*STSICW Trigger: CCAGCAAATGCTAGTAGATCAGGACCACCACCTAGC...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGAATCCAGAGAAGAAGTaGCGAATGTCCATGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDANPEKK*RMSMVP Trigger: GGGGACCATGGACATTCGCCACTTCTTCTCTGGATT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTTCCTACGCTGGCTGTaGAAAATGTCTGTATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSFLRWL*KMSVCF Trigger: AAAACATACAGACATTTTCCACAGCCAGCGTAGGAA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACATTCCTACGCTGGCTGTaGAAAATGTCTGTATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTFLRWL*KMSVCF Trigger: AAAACATACAGACATTTTCCACAGCCAGCGTAGGAA...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTATTGGGGGAATGGATaGCAGCGGTGGCAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFYWGNG*QRWQRW Trigger: CCATCTTTGCCACCGCTGCCATCCATTCCCCCAATA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTACCGGAGGAGGAACTaGTATTGGGGGAATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFYRRRN*YWGNGW Trigger: CCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTAAGGGACTGGGGGAATaGGAGGAACAGGTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFKGLGE*EEQVAQ Trigger: CTGTGCCACCTGTTCCTCCCATTCCCCCAGTCCCTT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAGGAATGTTTGTTATATaGGCACAGACTTTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTGMFVI*AQTLAE Trigger: TTCTGCCAAAGTCTGTGCCCATATAACAAACATTCC...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCCTTGGTGATGCTGAATaGAATGTTTGTTATATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFKACTTLSLNRPPYCLSLGDAE*NVCYMG Trigger: GCCCATATAACAAACATTCCATTCAGCATCACCAAG...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTCTGGTATCCCGGCAGTaGGAATTCCAGCAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTLVSRQ*EFQQQA Trigger: TGCCTGCTGCTGGAATTCCCACTGCCGGGATACCAG...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTGTGGCCCAAAGGCATTaGGCCCACCAAAATTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFVAQRH*AHQNYQ Trigger: CTGGTAATTTTGGTGGGCCCAATGCCTTTGGGCCAC...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGTTGGAATGGTTGAACTaGACGTTGGGCTCCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDALEWLN*TLGSQK Trigger: CTTTTGGGAGCCCAACGTTCAGTTCAACCATTCCAA...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTCTCTGTGGCAGGACTaGCTTCCACATAGCGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFSLWQD*LPHSVE Trigger: TTCAACGCTATGTGGAAGTCAGTCCTGCCACAGAGA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCCCACTGGGCGATTTTaGCCTTGGAAGTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFPTGRF*PWKCLW Trigger: CCACAGACACTTCCAAGGTCAAAATCGCCCAGTGGG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTACAATTGGGAGACCTTaGAAACGGATGACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFTIGRP*KRMTTA Trigger: GGCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTATGCTCTTCTCCTCCTaGACTGGGGATGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVMLFSS*TGDAST Trigger: GGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCAT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTGGTCCCCGCCACAATTaGGAGACCTTGCAAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFGPRHN*ETLQTD Trigger: ATCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACC...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTTTTTGTTGCTCTCATaGACAGAAGTGGTAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTFLLLS*TEVVAV Trigger: AACTGCTACCACTTCTGTTCATGAGAGCAACAAAAA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTCATGGAAAAACTCTCTaGCATCATTTTCCATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTHGKTL*HHFPLQ Trigger: CTGCAATGGAAAATGATGTCAGAGAGTTTTTCCATG...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTAGACTTTGGCAGAACTaGCTTCCCCCTCTGGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFRLWQN*LPPLDL Trigger: TAAATCCAGAGGGGGAAGTCAGTTCTGCCAAAGTCT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTCTAGGGTAACTATATaGACAAAAGCTTCTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTSRVTI*TKASLP Trigger: TGGGAGAGAAGCTTTTGTTCATATAGTTACCCTAGA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGAAGAGACTTCACGCTaGTTTGAGAATTCATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTEETSR*FENSSV Trigger: TACAGATGAATTCTCAAAGCAGCGTGAAGTCTCTTC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTTATCAACAAGAACATaGACAGCACTCTCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTLSTRT*TALSST Trigger: AGTGGATGAGAGTGCTGTGCATGTTCTTGTTGATAA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGCTTGCCCTAGACCTTaGCCATTGTTATCAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAACPRP*PLLSTR Trigger: TCTTGTTGATAACAATGGGCAAGGTCTAGGGCAAGC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGAGGTATCACTGGTACTaGAGGATTACCTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDARYHWY*RITWNR Trigger: TCTGTTCCAGGTAATCCTGCAGTACCAGTGATACCT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTACAGTCAAGAAGACATaGTCTTCTCCTCCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFTVKKT*SSPPAL Trigger: CAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTGGAGGCCCACTCAAATaGCCAGGAACACTTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTGGPLK*PGTLPR Trigger: TCTTGGAAGTGTTCCTGGGCATTTGAGTGGGCCTCC...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTCGCCCCCATCGGGGATaGTTAATCCAGAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTRPHRG*LIQRRS Trigger: ACTTCTTCTCTGGATTAACCATCCCCGATGGGGGCG...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGTGGGACCGTGTTCATTaGAGAAGCTGTACTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAWDRVH*RSCTWN Trigger: ATTCCAAGTACAGCTTCTCCAATGAACACGGTCCCA...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTAGGAATCGGTGGCGGTaGGACCGTGTTCATTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVRNRWR*DRVHWR Trigger: TCTCCAATGAACACGGTCCCACCGCCACCGATTCCT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTGATTGGAGGAATCGGTaGCGGTGGGACCGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVDWRNR*RWDRVH Trigger: ATGAACACGGTCCCACCGCCACCGATTCCTCCAATC...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTCAAAGATGGCATCGCTaGGATTGGAGGAATCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTQRWHR*DWRNRW Trigger: CCACCGATTCCTCCAATCCCAGCGATGCCATCTTTG...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTCTGGTATTGGGGGAATaGATGGCAGCGGTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVLVLGE*MAAVAK Trigger: CTTTGCCACCGCTGCCATCCATTCCCCCAATACCAG...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTACCTTTTCTGCCCACTaGGCGATTTTGACCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFTFSAH*AILTLE Trigger: TTCCAAGGTCAAAATCGCCCAGTGGGCAGAAAAGGT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTGTGGCCCAAAGGCATTaGGCCCACCAAAATTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTVAQRH*AHQNYQ Trigger: CTGGTAATTTTGGTGGGCCCAATGCCTTTGGGCCAC...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| 3UTR CAA 72 bp | GTTGTGGTCACACTGTCAACAGCCTTTTGGCTGTACTaGATTTCAAAAGTTTGGACTACAGAACTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVVTLSTAFWLY*ISKVWTTELPV Trigger: TACTGGCAGTTCTGTAGTCCAAACTTTTGAAATCAAGTACAGCCAAAAGGCTGTTGACAGTGTGACCACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCAGTGGCAAAAACGATaGAAGCCTCACCCAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFQWQKR*KPHPVH Trigger: GTGAACTGGGTGAGGCTTTCATCGTTTTTGCCACTG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGACTTCACGCTGCTTTaGGAATTCATCTGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDADFTLL*EFICIE Trigger: CTCTATACAGATGAATTCTCAAAGCAGCGTGAAGTC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTACAGATCATCAGGGTTaGTGGGAAGAGACTTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTTDHQG*WEETSR Trigger: GCGTGAAGTCTCTTCCCATCAACCCTGATGATCTGT...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGATTATTGGCCTCCTTTaGTCCTACAGTCAAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAIIGLL*SYSQED Trigger: GTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAAT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTCTGTATGTTTTTGTTaGTCTCATGAACAGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTSVCFC*SHEQKW Trigger: CCACTTCTGTTCATGAGAGCAACAAAAACATACAGA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTGTTCAGACCGATAGGTaGTCCAGAGCCATTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTVQTDR*SRAIHS Trigger: GGAATGAATGGCTCTGGAGCACCTATCGGTCTGAAC...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTGTTCAGACCGATAGGTaGTCCAGAGCCATTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFVQTDR*SRAIHS Trigger: GGAATGAATGGCTCTGGAGCACCTATCGGTCTGAAC...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGCGGAATATCTAAGTTaGCAGTTTCAAAACGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAAEYLS*QFQNAY Trigger: GTAGGCGTTTTGAAACTGCCAACTTAGATATTCCGC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTGAGCGGTTCCTACGCTaGCTGTGGAAAATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTERFLR*LWKMSV Trigger: TACAGACATTTTCCACAGCCAGCGTAGGAACCGCTC...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTGGGACCGTGTTCATTaGAGAAGCTGTACTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFWDRVH*RSCTWN Trigger: ATTCCAAGTACAGCTTCTCCAATGAACACGGTCCCA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTCAAAGATGGCATCGCTaGGATTGGAGGAATCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVQRWHR*DWRNRW Trigger: CCACCGATTCCTCCAATCCCAGCGATGCCATCTTTG...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCCCTCTGGTCATAGCTaGAGTTCTGAAGTCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFPSGHS*SSEVVF Trigger: GAAAACGACTTCAGAACTTCAGCTATGACCAGAGGG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTAGACTTTGGCAGAACTaGCTTCCCCCTCTGGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTRLWQN*LPPLDL Trigger: TAAATCCAGAGGGGGAAGTCAGTTCTGCCAAAGTCT...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGTATCATTTAAGTCAATaGCAGCAGCTGTGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAYHLSQ*QQLWLH Trigger: ATGAAGCCACAGCTGCTGTCATTGACTTAAATGATA...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCATCATACCAAGCCTTaGATCTTCATCAGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFHHTKP*IFISGK Trigger: TTTGCCACTGATGAAGATGCAAGGCTTGGTATGATG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGAAGAGACTTCACGCTaGTTTGAGAATTCATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAEETSR*FENSSV Trigger: TACAGATGAATTCTCAAAGCAGCGTGAAGTCTCTTC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTAGCAGTTACTACACTTaGCGAAGGATTATTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRNTVALRQSLQQPLYRTSSYYT*RRIIKV Trigger: AACTTTAATAATCCTTCGCCAAGTGTAGTAACTGCT...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTGAGCGGTTCCTACGCTaGCTGTGGAAAATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVERFLR*LWKMSV Trigger: TACAGACATTTTCCACAGCCAGCGTAGGAACCGCTC...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTTCGACTCGGAGCCCATaGAAAAACTCTCTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTSTRSP*KNSLTS Trigger: TGATGTCAGAGAGTTTTTCCATGGGCTCCGAGTCGA...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTACCTTTTCTGCCCACTaGGCGATTTTGACCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFTFSAH*AILTLE Trigger: TTCCAAGGTCAAAATCGCCCAGTGGGCAGAAAAGGT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTATGGTGGCCCATTATTaGCCTCCTTTGATCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTMVAHY*PPLILQ Trigger: CTGTAGGATCAAAGGAGGCCAATAATGGGCCACCAT...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTAATTATTGTAGGTCCTaGTTTTCCAGAGCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFNYCRS*FSRASS Trigger: GGAGCTAGCTCTGGAAAACCAGGACCTACAATAATT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTTTGGAATGGTTGAACTaGACGTTGGGCTCCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVLEWLN*TLGSQK Trigger: CTTTTGGGAGCCCAACGTTCAGTTCAACCATTCCAA...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTTCTAGGGTAACTATATaGACAAAAGCTTCTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFSRVTI*TKASLP Trigger: TGGGAGAGAAGCTTTTGTTCATATAGTTACCCTAGA...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTAAAGCCTTCACCAGTTaGTTTCCCATTGGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFKAFTS*FPIGSI Trigger: TATGGACCCAATGGGAAAGCAACTGGTGAAGGCTTT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTATGGTGGCCCATTATTaGCCTCCTTTGATCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVMVAHY*PPLILQ Trigger: CTGTAGGATCAAAGGAGGCCAATAATGGGCCACCAT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTAGGGAAGTTAAATGGTaGCCCATTATTGGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFREVKW*PIIGLL Trigger: AAGGAGGCCAATAATGGGCCACCATTTAACTTCCCT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTCCCATGTATTGTTTATaGCGACAGAGAGCAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVPMYCL*RQRAAL Trigger: TAAGGCTGCTCTCTGTCGTCATAAACAATACATGGG...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTAGGTATCACTGGTACTaGAGGATTACCTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVRYHWY*RITWNR Trigger: TCTGTTCCAGGTAATCCTGCAGTACCAGTGATACCT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCCCACTTATATTATTTaGTGCACCTCCAAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFPTYII*CTSKTW Trigger: CCAGGTTTTGGAGGTGCACCAAATAATATAAGTGGG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTAATTATTGTAGGTCCTaGTTTTCCAGAGCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTNYCRS*FSRASS Trigger: GGAGCTAGCTCTGGAAAACCAGGACCTACAATAATT...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTGACTTCACGCTGCTTTaGGAATTCATCTGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVDFTLL*EFICIE Trigger: CTCTATACAGATGAATTCTCAAAGCAGCGTGAAGTC...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCATGGAAAAACTCTCTaGCATCATTTTCCATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFHGKTL*HHFPLQ Trigger: CTGCAATGGAAAATGATGTCAGAGAGTTTTTCCATG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTTATCATTTAAGTCAATaGCAGCAGCTGTGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFYHLSQ*QQLWLH Trigger: ATGAAGCCACAGCTGCTGTCATTGACTTAAATGATA...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTTTATCAACAAGAACATaGACAGCACTCTCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTLSTRT*TALSST Trigger: AGTGGATGAGAGTGCTGTGCATGTTCTTGTTGATAA...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTGGAATGTTTGTTATATaGGCACAGACTTTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTGMFVI*AQTLAE Trigger: TTCTGCCAAAGTCTGTGCCCATATAACAAACATTCC...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTCTTGGTGATGCTGAATaGAATGTTTGTTATATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSRYWCLKPELHYVKDTLGDAE*NVCYMG Trigger: GCCCATATAACAAACATTCCATTCAGCATCACCAAG...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTTCTGTATGTTTTTGTTaGTCTCATGAACAGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFSVCFC*SHEQKW Trigger: CCACTTCTGTTCATGAGAGCAACAAAAACATACAGA...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTACTTATATTATTTGGTaGACCTCCAAAACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFTYIIW*TSKTWN Trigger: GTTCCAGGTTTTGGAGGTGCACCAAATAATATAAGT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CCA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCAGTTGCTTTCCCATTaGGTCCATAAGCTATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVSEQDVKNQMLLRERTFQLLSH*VHKLYK Trigger: TTTATATAGCTTATGGACCCAATGGGAAAGCAACTG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTACTTATATTATTTGGTaGACCTCCAAAACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVTYIIW*TSKTWN Trigger: GTTCCAGGTTTTGGAGGTGCACCAAATAATATAAGT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTCAGTTGCTTTCCCATTaGGTCCATAAGCTATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVQLLSH*VHKLYK Trigger: TTTATATAGCTTATGGACCCAATGGGAAAGCAACTG...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTAGCAGTTACTACACTTaGCGAAGGATTATTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLSFCTTTANKTTTFISVSSYYT*RRIIKV Trigger: AACTTTAATAATCCTTCGCCAAGTGTAGTAACTGCT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 90 bp | GGGCATCCCAGCACCAGGCATTCCAGCACTAGGCAATCCAGCCCCTaGTATCCCGGCAGTGGGAATTCCAGCAGCAGGCATCCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GHPSTRHSSTRQSSP*YPGSGNSSSRHPCT Trigger: AGTGCAGGGATGCCTGCTGCTGGAATTCCCACTGCCGGGATACCAGGGGCTGGATTGCCTAGTGCTGGAATGCCTGGTGCTGGGATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS GCA 90 bp | GACATGCTCTTCTCCTCCTGCACTGGGGATGCCAGCACCAGGTATTaGGGGACCAGGTATTGCGGGACCAGGTATTGCGGGACCGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DMLFSSCTGDASTRY*GTRYCGTRYCGTGH Trigger: ATGCCCGGTCCCGCAATACCTGGTCCCGCAATACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 90 bp | TGGTACCGGAGGAGGAACTGGTATTGGGGGAATGGATGGCAGCGGTaGCAAAGATGGCATCGCTGGGATTGGAGGAATCGGTGGCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WYRRRNWYWGNGWQR*QRWHRWDWRNRWRW Trigger: CCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 90 bp | TGGGGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGATTaGAGGAATCGGTGGCGGTGGGACCGTGTTCATTGGAGAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WGNGWQRWQRWHRWD*RNRWRWDRVHWRSC Trigger: ACAGCTTCTCCAATGAACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 90 bp | AGGAGGAACTGGTATTGGGGGAATGGATGGCAGCGGTGGCAAAGATaGCATCGCTGGGATTGGAGGAATCGGTGGCGGTGGGACCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRNWYWGNGWQRWQR*HRWDWRNRWRWDRV Trigger: AACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTTGCGGGACCGGGCATaGCGGGACCGGGCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFKACTTLSLNRPPYCLSLRDRA*RDRALR Trigger: CCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 90 bp | TGGTATTGGGGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGCTaGGATTGGAGGAATCGGTGGCGGTGGGACCGTGTTCATTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WYWGNGWQRWQRWHR*DWRNRWRWDRVHWR Trigger: TCTCCAATGAACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 90 bp | AGGTGGCACAGGAGGCAATGTTGGTACCGGAGGAGGAACTGGTATTaGGGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RWHRRQCWYRRRNWY*GNGWQRWQRWHRWD Trigger: ATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 90 bp | AGGAACAGGTGGCACAGGAGGCAATGTTGGTACCGGAGGAGGAACTaGTATTGGGGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: RNRWHRRQCWYRRRN*YWGNGWQRWQRWHR Trigger: GCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGCCACCTGTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 90 bp | AGGCAATGTTGGTACCGGAGGAGGAACTGGTATTGGGGGAATGGATaGCAGCGGTGGCAAAGATGGCATCGCTGGGATTGGAGGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQCWYRRRNWYWGNG*QRWQRWHRWDWRNR Trigger: CCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 90 bp | CAGGAGGCAATGTTGGTACCGGAGGAGGAACTGGTATTGGGGGAATaGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGATTGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QEAMLVPEEELVLGE*MAAVAKMASLGLEE Trigger: TTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS GCA 90 bp | ATCCTACAGTCAAGAAGACATGCTCTTCTCCTCCTGCACTGGGGATaGCAGCACCAGGTATTGCGGGACCAGGTATTGCGGGACCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ILQSRRHALLLLHWG*QHQVLRDQVLRDQV Trigger: TACCTGGTCCCGCAATACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGTAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 90 bp | CCTTTGATCCTACAGTCAAGAAGACATGCTCTTCTCCTCCTGCACTaGGGATGCCAGCACCAGGTATTGCGGGACCAGGTATTGCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLILQSRRHALLLLH*GCQHQVLRDQVLRD Trigger: GTCCCGCAATACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGTAGGATCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTTGCGGGACCGGGCATaGCGGGACCAGGCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTLRDRA*RDQALR Trigger: CCGCAATGCCTGGTCCCGCAATGCCCGGTCCCGCAA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS GCA 90 bp | GGTGGCCCATTATTGGCCTCCTTTGATCCTACAGTCAAGAAGACATaGTCTTCTCCTCCTGCACTGGGGATGCCAGCACCAGGTATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGPLLASFDPTVKKT*SSPPALGMPAPGIA Trigger: CGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATGGGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAATGGCATCGCTGGGATaGGAGGAATCGGTGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTMASLG*EESVAV Trigger: CACCGCCACCGATTCCTCCAATCCCAGCGATGCCAT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 90 bp | GTGGGACCGTGTTCATTGGAGAAGCTGTACTTGGAATGGTTGAACTaGACGTTGGGCTCCCAAAAGAAGTCCCCATGCTTGGAGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPCSLEKLYLEWLN*TLGSQKKSPCLEER Trigger: CCGCTCCTCCAAGCATGGGGACTTCTTTTGGGAGCCCAACGTTCAGTTCAACCATTCCAAGTACAGCTTCTCCAATGAACACGGTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS TCA 90 bp | TGGCGGTGGGACCGTGTTCATTGGAGAAGCTGTACTTGGAATGGTTaGACTGAACGTTGGGCTCCCAAAAGAAGTCCCCATGCTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WRWDRVHWRSCTWNG*TERWAPKRSPHAWR Trigger: CCTCCAAGCATGGGGACTTCTTTTGGGAGCCCAACGTTCAGTTCAACCATTCCAAGTACAGCTTCTCCAATGAACACGGTCCCACCGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS TCA 90 bp | GGGTGGGCTTGTCCAGAAGGCCCCATACTTTGCTTAAAAGTGATATaGCCTCCAGCAGCTACCCACTGTCTCTCTGTGGCAGGACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GWACPEGPILCLKVI*PPAATHCLSVAGLT Trigger: AGTCAGTCCTGCCACAGAGAGACAGTGGGTAGCTGCTGGAGGTCATATCACTTTTAAGCAAAGTATGGGGCCTTCTGGACAAGCCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 90 bp | AGCCAGCCTCATGTGGTGATCTTGATCTTGACCTTTTCTGCCCACTaGGCGATTTTGACCTTGGAAGTGTCTGTGGAGGAGGGTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQPHVVILILTFSAH*AILTLEVSVEEGGL Trigger: AAGCCCACCCTCCTCCACAGACACTTCCAAGGTCAAAATCGCCCAGTGGGCAGAAAAGGTCAAGATCAAGATCACCACATGAGGCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCGAGGAGGAACTGGTATaGGGGGAATGGATGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LFKACTTLSLNRPPYCLSEEELV*GEWMAA Trigger: CGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTC...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCTGGGCGATTTTGACCTaGGAAGTGTCTGTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKACTTLSLNRPPYCLSWAILT*EVSVEE Trigger: CTCCTCCACAGACACTTCCAAGGTCAAAATCGCCCA...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTGACCCCCAATATGGATaGGGCCAGGCCCAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFDPQYG*GQAQAQ Trigger: CTGGGCCTGGGCCTGGCCCAATCCATATTGGGGGTC...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGCCCACTGGGCGATTTaGACCTTGGAAGTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTAHWAI*TLEVSV Trigger: CACAGACACTTCCAAGGTCAAAATCGCCCAGTGGGC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTTTGCGGGACCGGGCATaGCGGGACCAGGCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFLRDRA*RDQALR Trigger: CCGCAATGCCTGGTCCCGCAATGCCCGGTCCCGCAA...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGGTGGCCCAAAGGCATaGGGCCCACCAAAATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTGGPKA*GPPKLP Trigger: TGGTAATTTTGGTGGGCCCAATGCCTTTGGGCCACC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTGCACAGGAGGCAATGTaGGTACCGGAGGAGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFAQEAM*VPEEEL Trigger: CAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGC...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGCCCACTGGGCGATTTaGACCTTGGAAGTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAAHWAI*TLEVSV Trigger: CACAGACACTTCCAAGGTCAAAATCGCCCAGTGGGC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAGCCCACTTATATTATTaGGTGCACCTCCAAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTAHLYY*VHLQNL Trigger: CAGGTTTTGGAGGTGCACCAAATAATATAAGTGGGC...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 90 bp | AAAATTACCAGGGAAGTTAAATGGTGGCCCATTATTGGCCTCCTTTaGTCCTACAGTCAAGAAGACATGCTCTTCTCCTCCTGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KITREVKWWPIIGLL*SYSQEDMLFSSCTG Trigger: CCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATGGGCCACCATTTAACTTCCCTGGTAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGCATCATACCAAGCCTaGCATCTTCATCAGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTASYQA*HLHQWQ Trigger: TTGCCACTGATGAAGATGCAAGGCTTGGTATGATGC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTTACAGATCATCAGGGTaGATGGGAAGAGACTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTYRSSG*MGRDFT Trigger: CGTGAAGTCTCTTCCCATCAACCCTGATGATCTGTA...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAAGCCTGCACAACCCTTTCCCTGAACAGACCACCATACTGTCTCTCCAGAAGGCCCCATACTTaGCTTAAAAGTGATATGACC | + |
|
Preference number: 5 (lower is better) Translates to: LFKACTTLSLNRPPYCLSRRPHT*LKSDMT Trigger: GGTCATATCACTTTTAAGCAAAGTATGGGGCCTTCT...GGAGAGACAGTATGGTGGTCTGTTCAGGGAAAGGGTTGTGCAGGCTTTGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGTGGGCGATTTTGACCTaGGAAGTGTCTGTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAWAILT*EVSVEE Trigger: CTCCTCCACAGACACTTCCAAGGTCAAAATCGCCCA...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGATATGGGCACAGACTTaGGCAGAACTGACTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAIWAQT*AELTSP Trigger: GGGGGAAGTCAGTTCTGCCAAAGTCTGTGCCCATAT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTGGTGGCCCAAAGGCATaGGGCCCACCAAAATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFGGPKA*GPPKLP Trigger: TGGTAATTTTGGTGGGCCCAATGCCTTTGGGCCACC...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCACAATTGGGAGACCTaGCAAACGGATGACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFHNWET*QTDDHS Trigger: GCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGTG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTATGGCATCGCTGGGATaGGAGGAATCGGTGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLSFCTTTANKTTTFISVMASLG*EESVAV Trigger: CACCGCCACCGATTCCTCCAATCCCAGCGATGCCAT...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTGAGGAGGAACTGGTATaGGGGGAATGGATGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFEEELV*GEWMAA Trigger: CGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTC...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTGCACAGGAGGCAATGTaGGTACCGGAGGAGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: QTSRYWCLKPELHYVKDTAQEAM*VPEEEL Trigger: CAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGC...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTATATGGGCACAGACTTaGGCAGAACTGACTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFIWAQT*AELTSP Trigger: GGGGGAAGTCAGTTCTGCCAAAGTCTGTGCCCATAT...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTTGGTCCCCGCCACAATaGGGAGACCTTGCAAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLSFCTTTANKTTTFISVWSPPQ*GDLANG Trigger: TCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACCA...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTGACTTCCACATAGCGTaGAATCATCAGCATTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTDFHIA*NHQHSV Trigger: AACAGAATGCTGATGATTCAACGCTATGTGGAAGTC...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS-3UTR CAA 90 bp | TCACGTAACACTGTTGCATTAAGACAGAGCCTACAGCAGCCACTGTACAGAACTAGAAGGCCCCATACTTaGCTTAAAAGTGATATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVALRQSLQQPLYRTRRPHT*LKSDMT Trigger: GGTCATATCACTTTTAAGCAAAGTATGGGGCCTTCT...AGTTCTGTACAGTGGCTGCTGTAGGCTCTGTCTTAATGCAACAGTGTTACGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCTCCAAGACCATCGCAGTATTGGAGAGGCTTTCCACACTTTCCACACAAGTTATTGGATGAACTaGAATAAAGCGATTGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLQDHRSIGEAFHTFHTSYWMN*NKAIAH Trigger: ATGGGCAATCGCTTTATTCAAGTTCATCCAATAACT...TGTGTGGAAAGTGTGGAAAGCCTCTCCAATACTGCGATGGTCTTGGAGGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 90 bp | GGGGAGAGAAACTTAACCAATCCATTCCCATTATTTCGACCTACATaGTCTTTTAACAAATGCACTGCATCGACTCGGAGCCCATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GERNLTNPFPLFRPT*SFNKCTASTRSPWK Trigger: TTTCCATGGGCTCCGAGTCGATGCAGTGCATTTGTTAAAAGATCATGTAGGTCGAAATAATGGGAATGGATTGGTTAAGTTTCTCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTCACAATTGGGAGACCTaGCAAACGGATGACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFHNWET*QTDDHS Trigger: GCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGTG...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGGCCCACTTATATTATTaGGTGCACCTCCAAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEHLVTFHNKLCCDSRDAAHLYY*VHLQNL Trigger: CAGGTTTTGGAGGTGCACCAAATAATATAAGTGGGC...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 90 bp | CCTACGCTGGCTGTGGAAAATGTCTGTATGTTTTTGTTGCTCTCATaGACAGAAGTGGTAGCAGTTACTACACTTGGCGAAGGATTATTA | + |
|
Preference number: 5 (lower is better) Translates to: PTLAVENVCMFLLLS*TEVVAVTTLGEGLL Trigger: TAATAATCCTTCGCCAAGTGTAGTAACTGCTACCACTTCTGTTCATGAGAGCAACAAAAACATACAGACATTTTCCACAGCCAGCGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS TCA 90 bp | AGAACATGCACAGCACTCTCATCCACTGGGATTCCTTCTAGGAACTaGAGAACATCCATCTTGGTGATGCTGAATGGAATGTTTGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: RTCTALSSTGIPSRN*RTSILVMLNGMFVI Trigger: TATAACAAACATTCCATTCAGCATCACCAAGATGGATGTTCTTCAGTTCCTAGAAGGAATCCCAGTGGATGAGAGTGCTGTGCATGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 90 bp | ACATACAGATCATCAGGGTTGATGGGAAGAGACTTCACGCTGCTTTaGGAATTCATCTGTATAGAGTTAACAGGATTTAATGGACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TYRSSGLMGRDFTLL*EFICIELTGFNGPR Trigger: TCTGGGTCCATTAAATCCTGTTAACTCTATACAGATGAATTCTCAAAGCAGCGTGAAGTCTCTTCCCATCAACCCTGATGATCTGTATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 90 bp | CGGTGTAAGTGTTCAGATTTATGTGCGTCATCTTCAGTTTTAAACTaGACCAATGCTTGCCCTAGACCTTGCCCATTGTTATCAACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCKCSDLCASSSVLN*TNACPRPCPLLSTR Trigger: TCTTGTTGATAACAATGGGCAAGGTCTAGGGCAAGCATTGGTTCAGTTTAAAACTGAAGATGACGCACATAAATCTGAACACTTACACCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 90 bp | GTTTTTGTTGCTCTCATGAACAGAAGTGGTAGCAGTTACTACACTTaGCGAAGGATTATTAAAGTTGGGTACTATTGCTGGCAAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFVALMNRSGSSYYT*RRIIKVGYYCWQVH Trigger: GTGAACTTGCCAGCAATAGTACCCAACTTTAATAATCCTTCGCCAAGTGTAGTAACTGCTACCACTTCTGTTCATGAGAGCAACAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTTACAGATCATCAGGGTaGATGGGAAGAGACTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFYRSSG*MGRDFT Trigger: CGTGAAGTCTCTTCCCATCAACCCTGATGATCTGTA...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | TGGACAGATTACGGTCTTCACTCATTTTCCAACGCTTTCAAACTGAGTGCATTTCATTATTGGCCTCCTTaGATCCTACAGTCAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WTDYGLHSFSNAFKLSAFHYWPP*ILQSRR Trigger: TCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATG...AAATGCACTCAGTTTGAAAGCGTTGGAAAATGAGTGAAGACCGTAATCTGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTAATGGTGGCCCATTATaGGCCTCCTTTGATCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFNGGPL*ASFDPT Trigger: TGTAGGATCAAAGGAGGCCAATAATGGGCCACCATT...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | CAGACTTCTCGATATTGGTGTTTGAAACCAGAGCTACATTATGTGAAAGATACTAATGGTGGCCCATTATaGGCCTCCTTTGATCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: QTSRYWCLKPELHYVKDTNGGPL*ASFDPT Trigger: TGTAGGATCAAAGGAGGCCAATAATGGGCCACCATT...AGTATCTTTCACATAATGTAGCTCTGGTTTCAAACACCAATATCGAGAAGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTGGCGGAATATCTAAGTaGGCAGTTTCAAAACGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFGGISK*AVSKRL Trigger: TAGGCGTTTTGAAACTGCCAACTTAGATATTCCGCC...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCATTTAGTTACATTTCACAACAAGCTCTGTTGTGATTCAAGGGATGCGAGTTATTGGATGAACTaGAATAAAGCGATTGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AEHLVTFHNKLCCDSRDASYWMN*NKAIAH Trigger: ATGGGCAATCGCTTTATTCAAGTTCATCCAATAACT...CGCATCCCTTGAATCACAACAGAGCTTGTTGTGAAATGTAACTAAATGCTCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS GCA 90 bp | CTTATAGTCAGCATCATTCCTAAATTCTACAAAGCCTTCACCAGTTaGTTTCCCATTGGGTCCATAAGCTATATAAATACTATCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LIVSIIPKFYKAFTS*FPIGSISYINTIFH Trigger: GTGGAAGATAGTATTTATATAGCTTATGGACCCAATGGGAAAGCAACTGGTGAAGGCTTTGTAGAATTTAGGAATGATGCTGACTATAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTCAGTGAACAAGATGTGAAAAACCAAATGCTTTTAAGGGAAAGGACATTTGAAGGATTATTAAAGTaGGGTACTATTGCTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVSEQDVKNQMLLRERTFEGLLK*GTIAGK Trigger: CTTGCCAGCAATAGTACCCAACTTTAATAATCCTTC...AAATGTCCTTTCCCTTAAAAGCATTTGGTTTTTCACATCTTGTTCACTGACACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTGACTTCCACATAGCGTaGAATCATCAGCATTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLSFCTTTANKTTTFISVDFHIA*NHQHSV Trigger: AACAGAATGCTGATGATTCAACGCTATGTGGAAGTC...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTCATTATTGGCCTCCTTaGATCCTACAGTCAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DLSFCTTTANKTTTFISVHYWPP*ILQSRR Trigger: TCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATG...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS-3UTR CAA 90 bp | GATCTTTCATTCTGCACTACTACTGCTAACAAAACTACCACTTTCATTTCAGTTGAAGGATTATTAAAGTaGGGTACTATTGCTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLSFCTTTANKTTTFISVEGLLK*GTIAGK Trigger: CTTGCCAGCAATAGTACCCAACTTTAATAATCCTTC...AACTGAAATGAAAGTGGTAGTTTTGTTAGCAGTAGTAGTGCAGAATGAAAGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 72 bp | CGGGCATTGCGGGACCGGGCATTGCGGGACCGGGCATaGCGGGACCGGGCATTGCGGGACCAGGCATTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RALRDRALRDRA*RDRALRDQALR Trigger: CCGCAATGCCTGGTCCCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAATGCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 90 bp | TTGCGGGACCAGGTATTGCGGGACCAGGTATTGCGGGACCGGGCATaGCGGGACCGGGCATTGCGGGACCGGGCATTGCGGGACCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRDQVLRDQVLRDRA*RDRALRDRALRDRA Trigger: TGCCCGGTCCCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAATACCTGGTCCCGCAATACCTGGTCCCGCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 72 bp | CAGGTATTGCGGGACCAGGTATTGCGGGACCGGGCATaGCGGGACCGGGCATTGCGGGACCGGGCATTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVLRDQVLRDRA*RDRALRDRALR Trigger: CCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAATGCCCGGTCCCGCAATACCTGGTCCCGCAATACCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 90 bp | TTGCGGGACCAGGCATTGCGGGACCAGGCATTGCAGGACCAGGCATaGCGGGACCAGGTATTCCCGCACCGGGTATTCCGGGACCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRDQALRDQALQDQA*RDQVFPHRVFRDRA Trigger: TGCCCGGTCCCGGAATACCCGGTGCGGGAATACCTGGTCCCGCAATGCCTGGTCCTGCAATGCCTGGTCCCGCAATGCCTGGTCCCGCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 90 bp | CTCCTGCACTGGGGATGCCAGCACCAGGTATTGCGGGACCAGGTATaGCGGGACCAGGTATTGCGGGACCGGGCATTGCGGGACCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLHWGCQHQVLRDQV*RDQVLRDRALRDRA Trigger: TGCCCGGTCCCGCAATGCCCGGTCCCGCAATACCTGGTCCCGCAATACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS GCA 72 bp | CCAGGCCCAGGCCCAAAGGCTGGAGGCCCACTCAAATaGCCAGGAACACTTCCAAGACCAGGGGGTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: PGPGPKAGGPLK*PGTLPRPGGPL Trigger: AAGTGGACCCCCTGGTCTTGGAAGTGTTCCTGGGCATTTGAGTGGGCCTCCAGCCTTTGGGCCTGGGCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 90 bp | AGACATGCTCTTCTCCTCCTGCACTGGGGATGCCAGCACCAGGTATaGCGGGACCAGGTATTGCGGGACCAGGTATTGCGGGACCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHALLLLHWGCQHQV*RDQVLRDQVLRDRA Trigger: TGCCCGGTCCCGCAATACCTGGTCCCGCAATACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 72 bp | GGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGATTaGAGGAATCGGTGGCGGTGGGACCGTGTTCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: GWQRWQRWHRWD*RNRWRWDRVHW Trigger: CCAATGAACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | GGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGCTaGGATTGGAGGAATCGGTGGCGGTGGGACCGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GNGWQRWQRWHR*DWRNRWRWDRV Trigger: AACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | AGGAGGCAGTGTGGTCATAGGTGGCACCGAAGGGACTaGGGGAATGGGAGGAACAGGTGGCACAGGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RRQCGHRWHRRD*GNGRNRWHRRQ Trigger: TTGCCTCCTGTGCCACCTGTTCCTCCCATTCCCCCAGTCCCTTCGGTGCCACCTATGACCACACTGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | TGGTATTGGGGGAATGGATGGCAGCGGTGGCAAAGATaGCATCGCTGGGATTGGAGGAATCGGTGGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WYWGNGWQRWQR*HRWDWRNRWRW Trigger: CCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | AGCACCAGGCATTCCAGCACTAGGCAATCCAGCCCCTaGTATCCCGGCAGTGGGAATTCCAGCAGCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: STRHSSTRQSSP*YPGSGNSSSRH Trigger: ATGCCTGCTGCTGGAATTCCCACTGCCGGGATACCAGGGGCTGGATTGCCTAGTGCTGGAATGCCTGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 72 bp | TGGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGATaGGAGGAATCGGTGGCGGTGGGACCGTGTTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: WMAAVAKMASLG*EESVAVGPCSL Trigger: CAATGAACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CAA 90 bp | TTGGGGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGATaGGAGGAATCGGTGGCGGTGGGACCGTGTTCATTGGAGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGEWMAAVAKMASLG*EESVAVGPCSLEKL Trigger: CAGCTTCTCCAATGAACACGGTCCCACCGCCACCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CAA 90 bp | CAGGTGGCACAGGAGGCAATGTTGGTACCGGAGGAGGAACTGGTATaGGGGGAATGGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QVAQEAMLVPEEELV*GEWMAAVAKMASLG Trigger: TCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGCCACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS TCA 72 bp | AGGTGCCACAGGTGGTGGATTCAAGGGTGGCATGCCTaGCATAGGAGGCAGTGTGGTCATAGGTGGCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: RCHRWWIQGWHA*HRRQCGHRWHR Trigger: TCGGTGCCACCTATGACCACACTGCCTCCTATGTCAGGCATGCCACCCTTGAATCCACCACCTGTGGCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | TGGTACCGGAGGAGGAACTGGTATTGGGGGAATGGATaGCAGCGGTGGCAAAGATGGCATCGCTGGGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: WYRRRNWYWGNG*QRWQRWHRWDW Trigger: CCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CAA 72 bp | GGGGAATGGGAGGAACAGGTGGCACAGGAGGCAATGTaGGTACCGGAGGAGGAACTGGTATTGGGGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: GEWEEQVAQEAM*VPEEELVLGEW Trigger: CCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGCCACCTGTTCCTCCCATTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS GCA 72 bp | TCAAGAAGACATGCTCTTCTCCTCCTGCACTGGGGATaGCAGCACCAGGTATTGCGGGACCAGGTATTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRRHALLLLHWG*QHQVLRDQVLR Trigger: CCGCAATACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 72 bp | AGGAGGAACTGGTATTGGGGGAATGGATGGCAGCGGTaGCAAAGATGGCATCGCTGGGATTGGAGGAATCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRNWYWGNGWQR*QRWHRWDWRNR Trigger: CCGATTCCTCCAATCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | ATGTTGGTACCGGAGGAGGAACTGGTATTGGGGGAATaGATGGCAGCGGTGGCAAAGATGGCATCGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MLVPEEELVLGE*MAAVAKMASLG Trigger: TCCCAGCGATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | GGGAATGGGAGGAACAGGTGGCACAGGAGGCAATGTTaGTACCGGAGGAGGAACTGGTATTGGGGGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GNGRNRWHRRQC*YRRRNWYWGNG Trigger: TCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTGTGCCACCTGTTCCTCCCATTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CAA 72 bp | CAGGAGGCAATGTTGGTACCGGAGGAGGAACTGGTATaGGGGGAATGGATGGCAGCGGTGGCAAAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QEAMLVPEEELV*GEWMAAVAKMA Trigger: TGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | AGGAGGCAATGTTGGTACCGGAGGAGGAACTGGTATTaGGGGAATGGATGGCAGCGGTGGCAAAGATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRQCWYRRRNWY*GNGWQRWQRWH Trigger: ATGCCATCTTTGCCACCGCTGCCATCCATTCCCCCAATACCAGTTCCTCCTCCGGTACCAACATTGCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CCA 72 bp | CTACAGTCAAGAAGACATGCTCTTCTCCTCCTGCACTaGGGATGCCAGCACCAGGTATTGCGGGACCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LQSRRHALLLLH*GCQHQVLRDQV Trigger: TACCTGGTCCCGCAATACCTGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 72 bp | GGATGGTTAATCCAGAGAAGAAGTGGCGAATGTCCATaGTCCCCGCCACAATTGGGAGACCTTGCAAACGGA | + |
|
Preference number: 6 (lower is better) Translates to: GWLIQRRSGECP*SPPQLGDLANG Trigger: TCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACCATGGACATTCGCCACTTCTTCTCTGGATTAACCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000128499.2 ENSMUST00000131377.8 ENSMUST00000138068.2 |
||
| CDS CAA 72 bp | TGGAGGAGGGTGGGCTTGTCCAGAAGGCCCCATACTTaGCTTAAAAGTGATATGACCTCCAGCAGCTACCCA | + |
|
Preference number: 6 (lower is better) Translates to: WRRVGLSRRPHT*LKSDMTSSSYP Trigger: TGGGTAGCTGCTGGAGGTCATATCACTTTTAAGCAAAGTATGGGGCCTTCTGGACAAGCCCACCCTCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 90 bp | AAGTGTCTGTGGAGGAGGGTGGGCTTGTCCAGAAGGCCCCATACTTaGCTTAAAAGTGATATGACCTCCAGCAGCTACCCACTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KCLWRRVGLSRRPHT*LKSDMTSSSYPLSL Trigger: GAGAGACAGTGGGTAGCTGCTGGAGGTCATATCACTTTTAAGCAAAGTATGGGGCCTTCTGGACAAGCCCACCCTCCTCCACAGACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 90 bp | CATGTGGTGATCTTGATCTTGACCTTTTCTGCCCACTGGGCGATTTaGACCTTGGAAGTGTCTGTGGAGGAGGGTGGGCTTGTCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HVVILILTFSAHWAI*TLEVSVEEGGLVQK Trigger: CTTCTGGACAAGCCCACCCTCCTCCACAGACACTTCCAAGGTCAAAATCGCCCAGTGGGCAGAAAAGGTCAAGATCAAGATCACCACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS GCA 72 bp | TTATTGGCCTCCTTTGATCCTACAGTCAAGAAGACATaGTCTTCTCCTCCTGCACTGGGGATGCCAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LLASFDPTVKKT*SSPPALGMPAP Trigger: TGGTGCTGGCATCCCCAGTGCAGGAGGAGAAGAGCATGTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CAA 72 bp | ATCTTGATCTTGACCTTTTCTGCCCACTGGGCGATTTaGACCTTGGAAGTGTCTGTGGAGGAGGGTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILILTFSAHWAI*TLEVSVEEGGL Trigger: AAGCCCACCCTCCTCCACAGACACTTCCAAGGTCAAAATCGCCCAGTGGGCAGAAAAGGTCAAGATCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS CCA 72 bp | CATGTGGTGATCTTGATCTTGACCTTTTCTGCCCACTaGGCGATTTTGACCTTGGAAGTGTCTGTGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HVVILILTFSAH*AILTLEVSVEE Trigger: CTCCTCCACAGACACTTCCAAGGTCAAAATCGCCCAGTGGGCAGAAAAGGTCAAGATCAAGATCACCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 72 bp | GACCGTGTTCATTGGAGAAGCTGTACTTGGAATGGTTaGACTGAACGTTGGGCTCCCAAAAGAAGTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DRVHWRSCTWNG*TERWAPKRSPH Trigger: ATGGGGACTTCTTTTGGGAGCCCAACGTTCAGTTCAACCATTCCAAGTACAGCTTCTCCAATGAACACGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
||
| CDS CAA 90 bp | ACAGAAGTGGTAGCAGTTACTACACTTGGCGAAGGATTATTAAAGTaGGGTACTATTGCTGGCAAGTTCACCCTGCTGCTCATCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TEVVAVTTLGEGLLK*GTIAGKFTLLLIPE Trigger: CTCAGGGATGAGCAGCAGGGTGAACTTGCCAGCAATAGTACCCAACTTTAATAATCCTTCGCCAAGTGTAGTAACTGCTACCACTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000128499.2 ENSMUST00000131377.8 |
||
| CDS CAA 90 bp | TTGGGCCCACCAAAATTACCAGGGAAGTTAAATGGTGGCCCATTATaGGCCTCCTTTGATCCTACAGTCAAGAAGACATGCTCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPPKLPGKLNGGPL*ASFDPTVKKTCSSP Trigger: AGGAGAAGAGCATGTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATGGGCCACCATTTAACTTCCCTGGTAATTTTGGTGGGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
||
| CDS TCA 72 bp | TGTTCATTGGAGAAGCTGTACTTGGAATGGTTGAACTaGACGTTGGGCTCCCAAAAGAAGTCCCCATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: CSLEKLYLEWLN*TLGSQKKSPCL Trigger: CAAGCATGGGGACTTCTTTTGGGAGCCCAACGTTCAGTTCAACCATTCCAAGTACAGCTTCTCCAATGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
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| CDS TCA 72 bp | AGGGAAGTTAAATGGTGGCCCATTATTGGCCTCCTTTaGTCCTACAGTCAAGAAGACATGCTCTTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: REVKWWPIIGLL*SYSQEDMLFSS Trigger: GGAGGAGAAGAGCATGTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATGGGCCACCATTTAACTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CAA 90 bp | ATCTTGGTGATGCTGAATGGAATGTTTGTTATATGGGCACAGACTTaGGCAGAACTGACTTCCCCCTCTGGATTTAACACCAGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ILVMLNGMFVIWAQT*AELTSPSGFNTSSL Trigger: GAGGGAACTGGTGTTAAATCCAGAGGGGGAAGTCAGTTCTGCCAAAGTCTGTGCCCATATAACAAACATTCCATTCAGCATCACCAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS TCA 72 bp | GCATTCCATGCACACTCACATACAGATCATCAGGGTTaGTGGGAAGAGACTTCACGCTGCTTTGAGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: AFHAHSHTDHQG*WEETSRCFENS Trigger: TGAATTCTCAAAGCAGCGTGAAGTCTCTTCCCATCAACCCTGATGATCTGTATGTGAGTGTGCATGGAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CCA 72 bp | TCCATCTTGGTGATGCTGAATGGAATGTTTGTTATATaGGCACAGACTTTGGCAGAACTGACTTCCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SILVMLNGMFVI*AQTLAELTSPS Trigger: AGAGGGGGAAGTCAGTTCTGCCAAAGTCTGTGCCCATATAACAAACATTCCATTCAGCATCACCAAGATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CAA 72 bp | GTAGCAGTTACTACACTTGGCGAAGGATTATTAAAGTaGGGTACTATTGCTGGCAAGTTCACCCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VAVTTLGEGLLK*GTIAGKFTLLL Trigger: GAGCAGCAGGGTGAACTTGCCAGCAATAGTACCCAACTTTAATAATCCTTCGCCAAGTGTAGTAACTGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000128499.2 ENSMUST00000131377.8 |
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| CDS CAA 90 bp | GGTGGTGGTCCTGATCTACTAGCATTTGCTGGCGGAATATCTAAGTaGGCAGTTTCAAAACGCCTACGACTCAGTTCAATCATATTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GGGPDLLAFAGGISK*AVSKRLRLSSIIFC Trigger: GCAAAATATGATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTTAGATATTCCGCCAGCAAATGCTAGTAGATCAGGACCACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000128499.2 ENSMUST00000131377.8 ENSMUST00000138068.2 |
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| CDS GCA 72 bp | TTTAATAGTACCACCTGTGCGCATCATACCAAGCCTTaGATCTTCATCAGTGGCAAAAACGATGAAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FNSTTCAHHTKP*IFISGKNDESL Trigger: GAGGCTTTCATCGTTTTTGCCACTGATGAAGATGCAAGGCTTGGTATGATGCGCACAGGTGGTACTATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000128499.2 ENSMUST00000131377.8 ENSMUST00000138068.2 |
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| CDS CAA 72 bp | CCTGATCTACTAGCATTTGCTGGCGGAATATCTAAGTaGGCAGTTTCAAAACGCCTACGACTCAGTTCAATC | + |
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Preference number: 6 (lower is better) Translates to: PDLLAFAGGISK*AVSKRLRLSSI Trigger: GATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTTAGATATTCCGCCAGCAAATGCTAGTAGATCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000128499.2 ENSMUST00000131377.8 ENSMUST00000138068.2 |
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| CDS CAA 72 bp | ATGCTGAATGGAATGTTTGTTATATGGGCACAGACTTaGGCAGAACTGACTTCCCCCTCTGGATTTAACACC | + |
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Preference number: 6 (lower is better) Translates to: MLNGMFVIWAQT*AELTSPSGFNT Trigger: GGTGTTAAATCCAGAGGGGGAAGTCAGTTCTGCCAAAGTCTGTGCCCATATAACAAACATTCCATTCAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CAA 72 bp | CCAAAATTACCAGGGAAGTTAAATGGTGGCCCATTATaGGCCTCCTTTGATCCTACAGTCAAGAAGACATGC | + |
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Preference number: 6 (lower is better) Translates to: PKLPGKLNGGPL*ASFDPTVKKTC Trigger: GCATGTCTTCTTGACTGTAGGATCAAAGGAGGCCAATAATGGGCCACCATTTAACTTCCCTGGTAATTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CAA 90 bp | GAGTTAACAGGATTTAATGGACCCAGAAACACAGGATTCATATTATaGTTCAGACCGATAGGTGCTCCAGAGCCATTCATTCCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ELTGFNGPRNTGFIL*FRPIGAPEPFIPAG Trigger: ACCTGCTGGAATGAATGGCTCTGGAGCACCTATCGGTCTGAACAATAATATGAATCCTGTGTTTCTGGGTCCATTAAATCCTGTTAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
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| CDS TCA 72 bp | CCTCTGGATTTAACACCAGTTCCCTCTGGTCATAGCTaGAGTTCTGAAGTCGTTTTCGAATCATATCTATCT | + |
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Preference number: 6 (lower is better) Translates to: PLDLTPVPSGHS*SSEVVFESYLS Trigger: AGATAGATATGATTCGAAAACGACTTCAGAACTTCAGCTATGACCAGAGGGAACTGGTGTTAAATCCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CAA 72 bp | GGATTTAATGGACCCAGAAACACAGGATTCATATTATaGTTCAGACCGATAGGTGCTCCAGAGCCATTCATT | + |
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Preference number: 6 (lower is better) Translates to: GFNGPRNTGFIL*FRPIGAPEPFI Trigger: AATGAATGGCTCTGGAGCACCTATCGGTCTGAACAATAATATGAATCCTGTGTTTCTGGGTCCATTAAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 ENSMUST00000131377.8 |
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| CDS TCA 72 bp | AACTTAACCAATCCATTCCCATTATTTCGACCTACATaGTCTTTTAACAAATGCACTGCATCGACTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: NLTNPFPLFRPT*SFNKCTASTRS Trigger: GCTCCGAGTCGATGCAGTGCATTTGTTAAAAGATCATGTAGGTCGAAATAATGGGAATGGATTGGTTAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS TCA 72 bp | TCATCAGGGTTGATGGGAAGAGACTTCACGCTGCTTTaGGAATTCATCTGTATAGAGTTAACAGGATTTAAT | + |
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Preference number: 6 (lower is better) Translates to: SSGLMGRDFTLL*EFICIELTGFN Trigger: ATTAAATCCTGTTAACTCTATACAGATGAATTCTCAAAGCAGCGTGAAGTCTCTTCCCATCAACCCTGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS GCA 72 bp | AGCATCATTCCTAAATTCTACAAAGCCTTCACCAGTTaGTTTCCCATTGGGTCCATAAGCTATATAAATACT | + |
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Preference number: 6 (lower is better) Translates to: SIIPKFYKAFTS*FPIGSISYINT Trigger: AGTATTTATATAGCTTATGGACCCAATGGGAAAGCAACTGGTGAAGGCTTTGTAGAATTTAGGAATGATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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| CDS CAA 90 bp | CATATCTATCTTTTCAAGCATACCTTTCTTAGTTATTGGATGAACTaGAATAAAGCGATTGCCCATGTATTGTTTATGACGACAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: HIYLFKHTFLSYWMN*NKAIAHVLFMTTES Trigger: GCTCTCTGTCGTCATAAACAATACATGGGCAATCGCTTTATTCAAGTTCATCCAATAACTAAGAAAGGTATGCTTGAAAAGATAGATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059647.12 ENSMUST00000109604.9 |
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